Protein TIME FOR
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G22380 AT3G22380 AT3G22380 |
| fragaria_vesca | FvH4_4g15230 FvH4_4g15230 |
| malus_domestica | MD13G1190800.v1.1 MD16G1127600.v1.1 MD16G1191200.v1.1 |
| prunus_persica | Prupe.1G011200_v2.0.a1 Prupe.1G011200_v2.0.a1 |
| pyrus_communis | pycom07g23630 pycom13g16390 pycom16g16090 |
| rosa_chinensis | RchiOBHm_Chr4g0416621 |
| rosa_laevigata | RLG00000007965 |
| rosa_multiflora | Rmu_co8150674.1_g000001 Rmu_sc0003722.1_g000056 |
| rosa_roxburghii | Rroxscaffold_5G00360500 |
| rosa_rugosa | Rorug04G0143400 Rorug04G0143500 |
| rosa_samantha | Rh4AG205900 Rh4BG203300 Rh4CG216700 Rh4DG202800 |
| rosa_wichuraiana | Rw4G017420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 2038, 3766 |
| Acc36I | ACCTGC | 3 cut(s) | 1105, 2038, 3766 |
| AccB1I | GGYRCC | 3 cut(s) | 1471, 3796, 4211 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 2854, 3824, 4079 |
| AccII | CGCG | 4 cut(s) | 568, 3541, 3749, 4107 |
| AclWI | GGATC | 6 cut(s) | 715, 1082, 1095, 1669, 4150, 4214 |
| AcoI | YGGCCR | 4 cut(s) | 279, 744, 1430, 1640 |
| AcuI | CTGAAG | 3 cut(s) | 2213, 2931, 3239 |
| AcyI | GRCGYC | 1 cut(s) | 3302 |
| AflIII | ACRYGT | 1 cut(s) | 2128 |
| Alw21I | GWGCWC | 3 cut(s) | 1397, 1508, 2140 |
| Alw26I | GTCTC | 5 cut(s) | 174, 198, 237, 982, 1965 |
| Alw44I | GTGCAC | 1 cut(s) | 2136 |
| AlwI | GGATC | 6 cut(s) | 715, 1082, 1095, 1669, 4150, 4214 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 710, 1664, 2083, 4238 |
| ApaLI | GTGCAC | 1 cut(s) | 2136 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 2393, 2425, 2554, 2586, 3706, 3738 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1634 |
| AspA2I | CCTAGG | 1 cut(s) | 3847 |
| AspLEI | GCGC | 5 cut(s) | 481, 1877, 3382, 3751, 4107 |
| AspS9I | GGNCC | 8 cut(s) | 248, 362, 775, 1674, 1898, 2156, 4328, 4384 |
| AsuC2I | CCSGG | 3 cut(s) | 840, 998, 3039 |
| AsuII | TTCGAA | 3 cut(s) | 402, 833, 3725 |
| AvaII | GGWCC | 4 cut(s) | 248, 362, 2156, 4384 |
| AvrII | CCTAGG | 1 cut(s) | 3847 |
| BaeGI | GKGCMC | 2 cut(s) | 2140, 3801 |
| BalI | TGGCCA | 3 cut(s) | 746, 1432, 1642 |
| BamHI | GGATCC | 1 cut(s) | 1087 |
| BanI | GGYRCC | 3 cut(s) | 1471, 3796, 4211 |
| BanII | GRGCYC | 2 cut(s) | 574, 1397 |
| BbsI | GAAGAC | 3 cut(s) | 63, 1301, 2403 |
| Bbv12I | GWGCWC | 3 cut(s) | 1397, 1508, 2140 |
| BbvCI | CCTCAGC | 1 cut(s) | 327 |
| BceAI | ACGGC | 4 cut(s) | 277, 294, 4118, 4232 |
| BciVI | GTATCC | 2 cut(s) | 1457, 3115 |
| BclI | TGATCA | 1 cut(s) | 3334 |
| BcnI | CCSGG | 3 cut(s) | 840, 998, 3039 |
| BcoDI | GTCTC | 5 cut(s) | 174, 198, 237, 982, 1965 |
| BfmI | CTRYAG | 5 cut(s) | 2019, 2423, 3611, 4242, 4347 |
| BfuAI | ACCTGC | 3 cut(s) | 1105, 2038, 3766 |
| BfuI | GTATCC | 2 cut(s) | 1457, 3115 |
| BglII | AGATCT | 2 cut(s) | 1018, 1043 |
| BlnI | CCTAGG | 1 cut(s) | 3847 |
| Bme18I | GGWCC | 4 cut(s) | 248, 362, 2156, 4384 |
| BmgT120I | GGNCC | 8 cut(s) | 248, 362, 775, 1674, 1898, 2156, 4328, 4384 |
| BmiI | GGNNCC | 9 cut(s) | 363, 1029, 1089, 1473, 1675, 2158, 3477, 3798, 4213 |
| BmrI | ACTGGG | 4 cut(s) | 605, 3795, 3888, 4297 |
| BmuI | ACTGGG | 4 cut(s) | 605, 3795, 3888, 4297 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1948 |
| BpiI | GAAGAC | 3 cut(s) | 63, 1301, 2403 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 665, 697 |
| BpmI | CTGGAG | 4 cut(s) | 1035, 1500, 1854, 3801 |
| Bpu10I | CCTNAGC | 1 cut(s) | 327 |
| Bpu14I | TTCGAA | 3 cut(s) | 402, 833, 3725 |
| BpuEI | CTTGAG | 2 cut(s) | 285, 2703 |
| BpuMI | CCSGG | 3 cut(s) | 840, 998, 3039 |
| Bsa29I | ATCGAT | 1 cut(s) | 602 |
| BsaBI | GATNNNNATC | 3 cut(s) | 320, 933, 1278 |
| BsaHI | GRCGYC | 1 cut(s) | 3302 |
| BsaI | GGTCTC | 2 cut(s) | 174, 198 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1498, 1528, 2768, 2798 |
| Bse118I | RCCGGY | 3 cut(s) | 216, 1243, 4421 |
| Bse3DI | GCAATG | 4 cut(s) | 1321, 2604, 3000, 3322 |
| Bse8I | GATNNNNATC | 3 cut(s) | 320, 933, 1278 |
| BseCI | ATCGAT | 1 cut(s) | 602 |
| BseJI | GATNNNNATC | 3 cut(s) | 320, 933, 1278 |
| BseMI | GCAATG | 4 cut(s) | 1321, 2604, 3000, 3322 |
| BseSI | GKGCMC | 2 cut(s) | 2140, 3801 |
| BseYI | CCCAGC | 3 cut(s) | 777, 1344, 2702 |
| BsgI | GTGCAG | 5 cut(s) | 531, 1731, 1767, 1998, 3048 |
| Bsh1236I | CGCG | 4 cut(s) | 568, 3541, 3749, 4107 |
| BshNI | GGYRCC | 3 cut(s) | 1471, 3796, 4211 |
| BshVI | ATCGAT | 1 cut(s) | 602 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1397, 1508, 2140 |
| BsiSI | CCGG | 8 cut(s) | 7, 217, 809, 839, 997, 1244, 3038, 4422 |
| BslFI | GGGAC | 3 cut(s) | 3619, 3895, 4165 |
| BsmAI | GTCTC | 5 cut(s) | 174, 198, 237, 982, 1965 |
| BsmBI | CGTCTC | 2 cut(s) | 237, 982 |
| BsmFI | GGGAC | 3 cut(s) | 3619, 3895, 4165 |
| BsmI | GAATGC | 2 cut(s) | 3289, 4042 |
| Bso31I | GGTCTC | 2 cut(s) | 174, 198 |
| Bsp119I | TTCGAA | 3 cut(s) | 402, 833, 3725 |
| Bsp1286I | GDGCHC | 5 cut(s) | 574, 1397, 1508, 2140, 3801 |
| Bsp19I | CCATGG | 1 cut(s) | 1494 |
| BspDI | ATCGAT | 1 cut(s) | 602 |
| BspFNI | CGCG | 4 cut(s) | 568, 3541, 3749, 4107 |
| BspHI | TCATGA | 1 cut(s) | 172 |
| BspLI | GGNNCC | 9 cut(s) | 363, 1029, 1089, 1473, 1675, 2158, 3477, 3798, 4213 |
| BspMAI | CTGCAG | 2 cut(s) | 2023, 4246 |
| BspMI | ACCTGC | 3 cut(s) | 1105, 2038, 3766 |
| BspPI | GGATC | 6 cut(s) | 715, 1082, 1095, 1669, 4150, 4214 |
| BspQI | GCTCTTC | 1 cut(s) | 1167 |
| BspT104I | TTCGAA | 3 cut(s) | 402, 833, 3725 |
| BspT107I | GGYRCC | 3 cut(s) | 1471, 3796, 4211 |
| BspTNI | GGTCTC | 2 cut(s) | 174, 198 |
| BsrDI | GCAATG | 4 cut(s) | 1321, 2604, 3000, 3322 |
| BsrFI | RCCGGY | 3 cut(s) | 216, 1243, 4421 |
| BssAI | RCCGGY | 3 cut(s) | 216, 1243, 4421 |
| BssNI | GRCGYC | 1 cut(s) | 3302 |
| BssT1I | CCWWGG | 4 cut(s) | 875, 1494, 3710, 3847 |
| Bst6I | CTCTTC | 8 cut(s) | 93, 158, 996, 1167, 3358, 3391, 3686, 3874 |
| BstACI | GRCGYC | 1 cut(s) | 3302 |
| BstAPI | GCANNNNNTGC | 7 cut(s) | 1745, 2030, 2660, 3178, 3250, 3952, 4238 |
| BstBI | TTCGAA | 3 cut(s) | 402, 833, 3725 |
| BstDSI | CCRYGG | 1 cut(s) | 1494 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 1479, 1731, 2913 |
| BstFNI | CGCG | 4 cut(s) | 568, 3541, 3749, 4107 |
| BstHHI | GCGC | 5 cut(s) | 481, 1877, 3382, 3751, 4107 |
| BstMAI | GTCTC | 5 cut(s) | 174, 198, 237, 982, 1965 |
| BstNSI | RCATGY | 4 cut(s) | 1352, 2132, 3181, 4024 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1948 |
| BstSFI | CTRYAG | 5 cut(s) | 2019, 2423, 3611, 4242, 4347 |
| BstSLI | GKGCMC | 2 cut(s) | 2140, 3801 |
| BstUI | CGCG | 4 cut(s) | 568, 3541, 3749, 4107 |
| BstV2I | GAAGAC | 3 cut(s) | 63, 1301, 2403 |
| BstX2I | RGATCY | 5 cut(s) | 707, 1018, 1043, 1087, 1661 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1825 |
| BstYI | RGATCY | 5 cut(s) | 707, 1018, 1043, 1087, 1661 |
| Bsu15I | ATCGAT | 1 cut(s) | 602 |
| BsuI | GTATCC | 2 cut(s) | 1457, 3115 |
| BsuTUI | ATCGAT | 1 cut(s) | 602 |
| BtgI | CCRYGG | 1 cut(s) | 1494 |
| BtgZI | GCGATG | 2 cut(s) | 273, 2060 |
| BtsI | GCAGTG | 4 cut(s) | 543, 628, 2677, 4239 |
| BveI | ACCTGC | 3 cut(s) | 1105, 2038, 3766 |
| CaiI | CAGNNNCTG | 4 cut(s) | 710, 1664, 2083, 4238 |
| CciI | TCATGA | 1 cut(s) | 172 |
| CfoI | GCGC | 5 cut(s) | 481, 1877, 3382, 3751, 4107 |
| Cfr10I | RCCGGY | 3 cut(s) | 216, 1243, 4421 |
| Cfr13I | GGNCC | 8 cut(s) | 248, 362, 775, 1674, 1898, 2156, 4328, 4384 |
| ClaI | ATCGAT | 1 cut(s) | 602 |
| CseI | GACGC | 1 cut(s) | 3310 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 4215, 4250 |
| EaeI | YGGCCR | 4 cut(s) | 279, 744, 1430, 1640 |
| Eam1104I | CTCTTC | 8 cut(s) | 93, 158, 996, 1167, 3358, 3391, 3686, 3874 |
| EarI | CTCTTC | 8 cut(s) | 93, 158, 996, 1167, 3358, 3391, 3686, 3874 |
| EciI | GGCGGA | 2 cut(s) | 529, 2943 |
| Ecl136II | GAGCTC | 1 cut(s) | 1395 |
| Eco130I | CCWWGG | 4 cut(s) | 875, 1494, 3710, 3847 |
| Eco24I | GRGCYC | 2 cut(s) | 574, 1397 |
| Eco31I | GGTCTC | 2 cut(s) | 174, 198 |
| Eco47I | GGWCC | 4 cut(s) | 248, 362, 2156, 4384 |
| Eco53kI | GAGCTC | 1 cut(s) | 1395 |
| Eco57I | CTGAAG | 3 cut(s) | 2213, 2931, 3239 |
| EcoICRI | GAGCTC | 1 cut(s) | 1395 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 1479, 1731, 2913 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2156 |
| EcoRI | GAATTC | 3 cut(s) | 511, 3448, 3727 |
| EcoT14I | CCWWGG | 4 cut(s) | 875, 1494, 3710, 3847 |
| EcoT22I | ATGCAT | 2 cut(s) | 2107, 4296 |
| EcoT38I | GRGCYC | 2 cut(s) | 574, 1397 |
| ErhI | CCWWGG | 4 cut(s) | 875, 1494, 3710, 3847 |
| Esp3I | CGTCTC | 2 cut(s) | 237, 982 |
| FaqI | GGGAC | 3 cut(s) | 3619, 3895, 4165 |
| FauI | CCCGC | 2 cut(s) | 3130, 3487 |
| FbaI | TGATCA | 1 cut(s) | 3334 |
| FriOI | GRGCYC | 2 cut(s) | 574, 1397 |
| GlaI | GCGC | 5 cut(s) | 480, 1876, 3381, 3750, 4106 |
| GsaI | CCCAGC | 3 cut(s) | 781, 1348, 2706 |
| GsuI | CTGGAG | 4 cut(s) | 1035, 1500, 1854, 3801 |
| HapII | CCGG | 8 cut(s) | 7, 217, 809, 839, 997, 1244, 3038, 4422 |
| HgaI | GACGC | 1 cut(s) | 3310 |
| HhaI | GCGC | 5 cut(s) | 481, 1877, 3382, 3751, 4107 |
| Hin1I | GRCGYC | 1 cut(s) | 3302 |
| Hin6I | GCGC | 5 cut(s) | 479, 1875, 3380, 3749, 4105 |
| HinP1I | GCGC | 5 cut(s) | 479, 1875, 3380, 3749, 4105 |
| HincII | GTYRAC | 5 cut(s) | 276, 492, 2276, 3972, 4252 |
| HindII | GTYRAC | 5 cut(s) | 276, 492, 2276, 3972, 4252 |
| HindIII | AAGCTT | 7 cut(s) | 222, 1152, 1803, 2721, 2979, 3753, 4035 |
| HpaI | GTTAAC | 1 cut(s) | 4252 |
| HpaII | CCGG | 8 cut(s) | 7, 217, 809, 839, 997, 1244, 3038, 4422 |
| Hpy99I | CGWCG | 4 cut(s) | 98, 119, 457, 4115 |
| HpyCH4IV | ACGT | 3 cut(s) | 230, 1695, 4113 |
| HpySE526I | ACGT | 3 cut(s) | 230, 1695, 4113 |
| Hsp92I | GRCGYC | 1 cut(s) | 3302 |
| HspAI | GCGC | 5 cut(s) | 479, 1875, 3380, 3749, 4105 |
| Ksp22I | TGATCA | 1 cut(s) | 3334 |
| KspAI | GTTAAC | 1 cut(s) | 4252 |
| LguI | GCTCTTC | 1 cut(s) | 1167 |
| LmnI | GCTCC | 6 cut(s) | 524, 1033, 1503, 2651, 3097, 3151 |
| MaeII | ACGT | 3 cut(s) | 230, 1695, 4113 |
| MaeIII | GTNAC | 7 cut(s) | 1102, 1213, 1351, 2993, 3623, 4173, 4189 |
| MfeI | CAATTG | 1 cut(s) | 3893 |
| MflI | RGATCY | 5 cut(s) | 707, 1018, 1043, 1087, 1661 |
| MhlI | GDGCHC | 5 cut(s) | 574, 1397, 1508, 2140, 3801 |
| MlsI | TGGCCA | 3 cut(s) | 746, 1432, 1642 |
| MluNI | TGGCCA | 3 cut(s) | 746, 1432, 1642 |
| MlyI | GAGTC | 6 cut(s) | 794, 806, 868, 2164, 2623, 4279 |
| MmeI | TCCRAC | 2 cut(s) | 181, 4118 |
| Mox20I | TGGCCA | 3 cut(s) | 746, 1432, 1642 |
| Mph1103I | ATGCAT | 2 cut(s) | 2107, 4296 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1634 |
| MscI | TGGCCA | 3 cut(s) | 746, 1432, 1642 |
| MseI | TTAA | 5 cut(s) | 396, 1040, 1124, 3078, 4251 |
| MslI | CAYNNNNRTG | 3 cut(s) | 533, 2133, 2799 |
| Msp20I | TGGCCA | 3 cut(s) | 746, 1432, 1642 |
| MspA1I | CMGCKG | 3 cut(s) | 1520, 1652, 2467 |
| MspI | CCGG | 8 cut(s) | 7, 217, 809, 839, 997, 1244, 3038, 4422 |
| MunI | CAATTG | 1 cut(s) | 3893 |
| Mva1269I | GAATGC | 2 cut(s) | 3289, 4042 |
| MvnI | CGCG | 4 cut(s) | 568, 3541, 3749, 4107 |
| NciI | CCSGG | 3 cut(s) | 840, 998, 3039 |
| NcoI | CCATGG | 1 cut(s) | 1494 |
| NlaIV | GGNNCC | 9 cut(s) | 363, 1029, 1089, 1473, 1675, 2158, 3477, 3798, 4213 |
| NmuCI | GTSAC | 3 cut(s) | 1102, 2993, 4173 |
| NsiI | ATGCAT | 2 cut(s) | 2107, 4296 |
| NspI | RCATGY | 4 cut(s) | 1352, 2132, 3181, 4024 |
| NspV | TTCGAA | 3 cut(s) | 402, 833, 3725 |
| PagI | TCATGA | 1 cut(s) | 172 |
| PaqCI | CACCTGC | 2 cut(s) | 2038, 3766 |
| PciI | ACATGT | 1 cut(s) | 2128 |
| PciSI | GCTCTTC | 1 cut(s) | 1167 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2566 |
| PctI | GAATGC | 2 cut(s) | 3289, 4042 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1634 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 2854, 3824, 4079 |
| PfoI | TCCNGGA | 1 cut(s) | 2062 |
| PleI | GAGTC | 6 cut(s) | 793, 805, 867, 2164, 2623, 4279 |
| PpsI | GAGTC | 6 cut(s) | 793, 805, 867, 2164, 2623, 4279 |
| PpuMI | RGGWCCY | 1 cut(s) | 2156 |
| PscI | ACATGT | 1 cut(s) | 2128 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1948 |
| Psp124BI | GAGCTC | 1 cut(s) | 1397 |
| Psp5II | RGGWCCY | 1 cut(s) | 2156 |
| PspFI | CCCAGC | 3 cut(s) | 777, 1344, 2702 |
| PspN4I | GGNNCC | 9 cut(s) | 363, 1029, 1089, 1473, 1675, 2158, 3477, 3798, 4213 |
| PspPI | GGNCC | 8 cut(s) | 248, 362, 775, 1674, 1898, 2156, 4328, 4384 |
| PspPPI | RGGWCCY | 1 cut(s) | 2156 |
| PstI | CTGCAG | 2 cut(s) | 2023, 4246 |
| PstNI | CAGNNNCTG | 4 cut(s) | 710, 1664, 2083, 4238 |
| PsuI | RGATCY | 5 cut(s) | 707, 1018, 1043, 1087, 1661 |
| PvuII | CAGCTG | 2 cut(s) | 1520, 1652 |
| RseI | CAYNNNNRTG | 3 cut(s) | 533, 2133, 2799 |
| SacI | GAGCTC | 1 cut(s) | 1397 |
| SapI | GCTCTTC | 1 cut(s) | 1167 |
| SaqAI | TTAA | 5 cut(s) | 396, 1040, 1124, 3078, 4251 |
| Sau96I | GGNCC | 8 cut(s) | 248, 362, 775, 1674, 1898, 2156, 4328, 4384 |
| SchI | GAGTC | 6 cut(s) | 794, 806, 868, 2164, 2623, 4279 |
| SduI | GDGCHC | 5 cut(s) | 574, 1397, 1508, 2140, 3801 |
| SfcI | CTRYAG | 5 cut(s) | 2019, 2423, 3611, 4242, 4347 |
| SfuI | TTCGAA | 3 cut(s) | 402, 833, 3725 |
| SinI | GGWCC | 4 cut(s) | 248, 362, 2156, 4384 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 533, 2133, 2799 |
| SmlI | CTYRAG | 2 cut(s) | 300, 2718 |
| SmoI | CTYRAG | 2 cut(s) | 300, 2718 |
| SspI | AATATT | 2 cut(s) | 1270, 2578 |
| SstI | GAGCTC | 1 cut(s) | 1397 |
| StyI | CCWWGG | 4 cut(s) | 875, 1494, 3710, 3847 |
| TaiI | ACGT | 3 cut(s) | 233, 1698, 4116 |
| TatI | WGTACW | 3 cut(s) | 2850, 4002, 4052 |
| Tru1I | TTAA | 5 cut(s) | 396, 1040, 1124, 3078, 4251 |
| Tru9I | TTAA | 5 cut(s) | 396, 1040, 1124, 3078, 4251 |
| TseFI | GTSAC | 3 cut(s) | 1102, 2993, 4173 |
| Tsp45I | GTSAC | 3 cut(s) | 1102, 2993, 4173 |
| TspGWI | ACGGA | 5 cut(s) | 57, 1133, 1208, 1405, 3118 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 2854, 3824, 4079 |
| VneI | GTGCAC | 1 cut(s) | 2136 |
| VpaK11BI | GGWCC | 4 cut(s) | 248, 362, 2156, 4384 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 1479, 1731, 2913 |
| XceI | RCATGY | 4 cut(s) | 1352, 2132, 3181, 4024 |
| XmaJI | CCTAGG | 1 cut(s) | 3847 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1634 |
| Zsp2I | ATGCAT | 2 cut(s) | 2107, 4296 |