RchiOBHm_Chr4g0416621

Protein TIME FOR

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
41651652 .. 41659051
7400 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ38675

Sequence Viewer

Length: 4911 bp
ATGGATAGGAATAGAGATGCCAGGAGAGGAACTATGGCGGCCACAAATGGCTTGTCAAGACGAAGACACAGAAATAATAGCCTCAGAGACTCCCCAGAGGACGATGGTCCGATGGAGTTACAAGAGACGTCGAGGCTGAGAGATCGAGGGAGCGGGAAGAAGGATCGGGACCGGGATCGAGACCGCGAGCGAGACCGGGACCGGGACCGAGATCGGGACCGGGATCGGATGAGCCGGAACAAGAGGAGGAGAGGCGAGAGATTGATGCACGGAAGCAATAGAGAAGACGGGGGTGAAGATAGTTCGGAGGAGAGTGTGAACGACGAAGAGGAAGATGAATACGACGAAGGTGGAGGCGGCGGCGGCGGTGGCTCTATTCGTATGCTTCCGCCAAATCCGCCAACGACGTCACTTTCTTCGTCGTCGTCTTTGTTGAATCACCGAAAGAGCTTCCCTCCGGTTAGTAATAATAAGCATTTTAGACCGCTGCCGGCGTTGAAGGTCACCGATGAAATGATTGGTGTTTCCGTACCCAGAAAAGCACGGTCAGCTTCCACGAAGAGGTCTCATGAATGGCCTTCCAGTTGTGGCGTTGTGGGAGACCAATTTCACCGGCAAGCTTCTACGTCTCCGGTCCGGCCAAGCACGTCATCGATGGCTGCGCCATCCCTAGCTCCGACCTCGCCCTCTTCTTCTCACGCTTCGGTTAGGAAGAAGCCGAAACTCAATGGTCCAAAATTGAGGCCGCCGAAGATGTCAACGACCAAAACATCGCCGTCTGCTCAAGACGATATAGAGATTGAGATCGCTGAGGTGTTGTATGGAATGTTGAGGCAACCGCAGGGTCCGAAGCAAGAGATTACAGCCACCGATTCAATTAAGTTTGAATCAAGAGAAGCCAACAAGTCCACCAGTGATGCCAAGTCTAGAGTTTCGTCGCCGATCTCTAACTCGCCCTGTGCGCCTCCTCAGTTGACATCGGCTTTTCCTCAGAATTCTAGCTCCTCCGCCACTTCCATGTCCGCCACTGCACCCAAGAGGAAAAGACCGCGAGCCCCCGCCAAGTATGATGAAGAACACCCATCGATTTTCCCAGTTCAAAGCAGTGCCATTTCGTCTACAAACAAGGTGGCCACAGATCAATCCATGAAGATTGAGGCTTCCTCTCCAAATTTGGAGAAAAGCCCAGGATCTGTTACTGAAAATGGTGGGTTTTCGTACAACTTGGCCAACTCTCACGCCATTTCAGTACCAGAGGCCCAGCCTGAGTCCAAGAAGGAGTCAATGAAGCCGGAGAGCAAGGGTATGTCTGATTCGAAGCCGGGTAATGATGAATCGCAGAGTCAAAATCTCAAACCGAGGAAAGAGGAAGCTCAATCCCCCAAGAAGGAATCCCCTGTGTTCAGATTGGATGATAATCGTGAGGATATGAAAGCGACCAATAAAGCAAATTCAACCGTCTCTGAGACTGAGAACCACCGGGAAGAGAAATTCCAGATAGATCTGATGGCTCCTCCTCCATTAAGATCTTCTCCAGAAAGGGTTGGCGAGGTTGATTTTGTGTCTGTGGATCCTAAACCTACGGTCACAGTTGCAGAAACGGAATTAAAGTCCATGACCAGAGAAGATGACAAAGCTTTGAAATTTGGGAAGGAAGAGCCTGCAAATGTGGAAACGGAGAAGTCTAGTAAAGCAGTAACAGTGGGCGGTAAGGAAGAGCCTGCAAATGAGTTCAAGAAGCCTGTTGTGGGCGGTAAGGAAAGGAATATTGATCTCCAGCTTGATTTGGAGAAGACTGATAGAGATAGTGGCAATGCTGGTTTTAGTGGAAACAAGCTGCCCCAGCATGTTACTAAGCAGCAACAAAGCACTGAGAAATCTGTTCAACCGAGCTCTGTTCCTTTGCCAATGTCCGTGCCTGCTGGCTGGCCAGGGGGGCTTTCTCCAATGGGATACATGGCACCTTTACAAGGAGTTGTGTCCATGGATGGGAGCACCGTTCCTCCAGCTGCTATGCAACCACCACAAGTGCTTTTCAACCAACCTCGCCCAAAGAGGTGTGCAACCCATTTCTACATTGCAAGGAATATATGCTATCACCAGCATATGTCGAAGATGAATCCTTTCTGGCCAGTAGCAGCTGGTACAGGATCTGTTTATGGGGCCAAGCACTGTAATCCAAGCGTGATTCCCTCAGAATTTCATGGGAGTATTCCTGGTAGAGGTGCAAATTCTGCACCTGACAAGGGGCAGGGGCTTGCTATGTTTCCTGCACAACCTGGGAAGGAAAAAGCTTCACCAACAGCCAATCTTATGGATGCACAGAGAAAGCAAATTGTAATCCAGCAAGCTCTACCTCCAGGCGCACCTAGTAATATGTTGCATGGCCCTGCTTTCATTTTCCCTTTGAGCCAGCAACAGGCTTCTGTTCGACCTGGGTCTGGGAAGTCTCCCAATGCTGGTAGTGCAGCTTTACCAAGTTCAGTGAACTCTGCATCATTGACTGCTGCAGCAACACCTGCTGTACCTCCTGCGATGAGCTTCAATTATCCAGGAAATGAACCTCAGTATCTGGCAATTTTGCAGAACAATGCATATCCTTTTCCAATGCCAGCACATGTTGGTGCACCACCAGCTTATAGAGGACCCCATGCTCAGACTCTACCTTATTTTAGTGGGTCTTTCTATTCTTCCCAAATGCTGCATCCTTCTCAGCTTCAGCAGCAGCAGCAACAACCACCCTCTCAATCACAGCAAAGTCAACAGGGTCATCAAAACCCTAGTATTTCCAGTGGTTCATCATCATCTCAGAAGCATTTGCAAAATCAGCAGCAGAGGCCACCTTCCAGTGGCGTGAATGGTGGCTTGCAAGGCTTTCCTGCCTCAAAAAACCAGTCTTCACAGACACTACAGCAGCAGCAGCAACAACAACAGCAGCAGCAGCATCAGCGGCAACCTCAACAAAACCCTCATGTCCCTCACCAAGCTCGCCAACTTGAACATGAGATGGGTGGTGAAGATAGCCCATCAACTGCTGATAGTCGAATCTCTCGTCCGAATATTTATGCTCAGAATTTTGCAATGCACCCACCAAACTTTGCTGTAATGACAACTCCAATGGGTAGTGCTAGTGGAGCAACTGCTGCCAGTGGCAGTGAAAAGAAGCAGCAGCAAGGCTCAAAGGCTGGGGTTGAAGGCTCTCAAGCTTTTGCTATGTCTTTTGCTTCCCTAAATGGTGCTAACGCTGCTAGTAGCCTCGACATGGCCTCCCTAGCACACAGTCATGCAATTTTCCAGAGCCTTCCAGAAGTTATTACTAGGCAAGGCTATCAGTACATGGCTGCTGCTGTGCAAGCACAAGCAGCTCAACATAAGAAGAATTATCGCCACCCTGAAGAAGGGAAAAGCGGAGGAGGTGATTCCTCTAATGTGGAGGAGGAAAGAAAGACCGTGATAGGGAAAGCTTCAACTGTTGGTCACTCCATTGCTTTCTCCACTGATGGTTCCGTTTCTACAATACCGGGAAATAATGTCCTTGATAGCTCTGCGCCACGAAGTCTTAATCTCAGTTCTGCTCCCGTCAGGGTATCCAGTTCTGTTATGCCCGCCTCCGTGAGTTCTGTAAATGCTCCCACACATCAGCAGCAGCAATTTCAGCAGCATATGCGGAATCAGCAGCAACAGCAGATGCAGCAGCAACAACAGCAGATGCAGCAGCAGCAGCAGCAGATACTTCAGCTTCAGAAGCAACAGCTACAACAGAATTCAGCTCGAAGCAAGACACCAGCAACAAGCAATGGCAGCGTTTACTCTGATCACCTTCCTTCAACCTCTTCTATGGTTGCAAAGTTTCCTAATGCGCTCTCTTCAATCCCCCATAACCTTGTCCAAAGTAGCACCAGTCCCTCTCAATCTCCTCAGTGGAAGAATTCTGCCAGGACAACTACTTCCCAGGTTCCTGCATCATCACTGGCCTCATCAACCTCCTCATCCCTCAAAAATCATCCTCAAAAGCAATCGCGTACACAGCAAAGCCACACACAGATTTCTTTTGCAGCCAACCCGAAGTCATCCACCCAAAATCAGGGGCTACAGCCTGCCAGTAACAACCAGTCCCCATCTCCTCCAATAATGGTTGGCTCACCCACAACCACGACTTCGTCAATGTCGAAGAGTGCTGGTGGAAGCCCAAGGACAAATACTTCGAATTCCACTGGTAATAAAGCCGCGCAAGCTTCTTCATTGTCCTCTCAGCAGGTGAAGAACTCACCATCGGTGCCCAGTCAGAAGTCATCTCCAGTTGGTGGGAGGAATGTTCCTTCGAGCCTAGGCAATACTCATATTACCTCTTCAAGCACTGGGACAAAATCACAATTGACACAACAGCAACAACATCAGCAACATCAGCATCAGCAGCAACAACAGCAACATCTGCATCAGCAGCAGCAGTTGACTAAGCACTCAATTCAGCAAGCACAGGTGTACTATTCTAATGCCTACATGCAACCCCAACAAGCTTCGCATTCCAATAGTACAGGTGGTACTGCATCCCCTTCTAGTGGGTATTATGTTCCAACAAGACGGCGTGGCGACGTACAGCAGCAGTCGCAACATTCACAGGGATCATCAGGGACGTCTTCAAGTGGGATGTTGTCACTCTGCCCTCCTGTTACGCTTGCTAATAATACTGGCACCACTGATCCTGCAAAGGCAGTGGCTGCTGCAGCTGTTAACAACATCAAAGGTGTTGGTTTATCTTCACAGACTCTTATGCATCATGCCCAGTTTGCTGTTGCACAATCCTCTGGGCCTCATCAGCTTGTACCTACAGGCTTCCCTTATGTTCATCCTGTTCCCACTGTGGTCCAGATGAAACCAGCAGAACAGAAGAAGCAACCAGCCGGTGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1636

Amino Acids

175.83

Weight (kDa)

9.65

Isoelectric Point (pI)

75.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 2527, 4246
AatII GACGTC 3 cut(s) 131, 410, 4637
Acc36I ACCTGC 2 cut(s) 2527, 4246
AccB1I GGYRCC 3 cut(s) 1960, 4276, 4691
AccB7I CCANNNNNTGG 1 cut(s) 4304
AccBSI CCGCTC 1 cut(s) 153
AccI GTMKAC 1 cut(s) 1118
AccII CGCG 4 cut(s) 186, 1051, 4021, 4229
AclWI GGATC 9 cut(s) 171, 183, 231, 1198, 1565, 1578, 2158, 4630, 4694
AcoI YGGCCR 6 cut(s) 39, 638, 1131, 1227, 1928, 2129
AcuI CTGAAG 4 cut(s) 2702, 3414, 3719, 3725
AcyI GRCGYC 3 cut(s) 128, 407, 4634
AflIII ACRYGT 1 cut(s) 2617
AjiI CACGTC 1 cut(s) 648
Alw21I GWGCWC 3 cut(s) 1895, 1997, 2629
Alw44I GTGCAC 1 cut(s) 2625
AlwI GGATC 9 cut(s) 171, 183, 231, 1198, 1565, 1578, 2158, 4630, 4694
AlwNI CAGNNNCTG 4 cut(s) 1193, 2153, 2572, 4718
ApaLI GTGCAC 1 cut(s) 2625
ArsI GACNNNNNNTTYG 8 cut(s) 38, 70, 2879, 2911, 3037, 3069, 4186, 4218
Asp700I GAANNNNTTC 1 cut(s) 2123
AspA2I CCTAGG 1 cut(s) 4327
AspLEI GCGC 6 cut(s) 664, 964, 2366, 3550, 3862, 4231
AsuC2I CCSGG 7 cut(s) 173, 197, 203, 221, 1323, 1481, 3522
AsuII TTCGAA 2 cut(s) 1316, 4205
AvrII CCTAGG 1 cut(s) 4327
BaeGI GKGCMC 2 cut(s) 2629, 4281
BaeI ACNNNNGTAYC 2 cut(s) 2552, 2585
BalI TGGCCA 4 cut(s) 1133, 1229, 1930, 2131
BamHI GGATCC 1 cut(s) 1570
BanI GGYRCC 3 cut(s) 1960, 4276, 4691
BanII GRGCYC 2 cut(s) 1057, 1895
BbsI GAAGAC 5 cut(s) 70, 291, 1799, 2889, 4629
Bbv12I GWGCWC 3 cut(s) 1895, 1997, 2629
BbvCI CCTCAGC 1 cut(s) 810
BceAI ACGGC 2 cut(s) 760, 4598
BciVI GTATCC 2 cut(s) 1946, 3598
BclI TGATCA 1 cut(s) 3814
BcnI CCSGG 7 cut(s) 173, 197, 203, 221, 1323, 1481, 3522
BfmI CTRYAG 5 cut(s) 2508, 2909, 4091, 4722, 4827
BfuAI ACCTGC 2 cut(s) 2527, 4246
BfuI GTATCC 2 cut(s) 1946, 3598
BglI GCCNNNNNGGC 1 cut(s) 1936
BglII AGATCT 2 cut(s) 1501, 1526
BlnI CCTAGG 1 cut(s) 4327
BmgBI CACGTC 1 cut(s) 648
BmrI ACTGGG 4 cut(s) 1088, 4275, 4368, 4777
BmuI ACTGGG 4 cut(s) 1088, 4275, 4368, 4777
BoxI GACNNNNGTC 2 cut(s) 105, 2437
BpiI GAAGAC 5 cut(s) 70, 291, 1799, 2889, 4629
BplI GAGNNNNNCTC 4 cut(s) 439, 471, 1148, 1180
BpmI CTGGAG 5 cut(s) 1518, 1760, 1989, 2343, 4281
Bpu10I CCTNAGC 1 cut(s) 810
Bpu14I TTCGAA 2 cut(s) 1316, 4205
BpuEI CTTGAG 2 cut(s) 768, 3186
BpuMI CCSGG 7 cut(s) 173, 197, 203, 221, 1323, 1481, 3522
Bsa29I ATCGAT 2 cut(s) 653, 1085
BsaBI GATNNNNATC 2 cut(s) 803, 1416
BsaHI GRCGYC 3 cut(s) 128, 407, 4634
BsaI GGTCTC 4 cut(s) 174, 186, 570, 594
BsaJI CCNNGG 9 cut(s) 1186, 1358, 1931, 1983, 2279, 2435, 3951, 4190, 4327
BsaWI WCCGGW 2 cut(s) 457, 631
BsaXI ACNNNNNCTCC 4 cut(s) 1987, 2017, 3251, 3281
Bse118I RCCGGY 3 cut(s) 490, 612, 4901
Bse3DI GCAATG 5 cut(s) 1819, 2076, 3087, 3483, 3802
Bse8I GATNNNNATC 2 cut(s) 803, 1416
BseCI ATCGAT 2 cut(s) 653, 1085
BseDI CCNNGG 9 cut(s) 1186, 1358, 1931, 1983, 2279, 2435, 3951, 4190, 4327
BseJI GATNNNNATC 2 cut(s) 803, 1416
BseMI GCAATG 5 cut(s) 1819, 2076, 3087, 3483, 3802
BseSI GKGCMC 2 cut(s) 2629, 4281
BseYI CCCAGC 3 cut(s) 1260, 1842, 3185
BsgI GTGCAG 4 cut(s) 1014, 2220, 2256, 2487
Bsh1236I CGCG 4 cut(s) 186, 1051, 4021, 4229
BshNI GGYRCC 3 cut(s) 1960, 4276, 4691
BshVI ATCGAT 2 cut(s) 653, 1085
BsiHKAI GWGCWC 3 cut(s) 1895, 1997, 2629
BslFI GGGAC 9 cut(s) 182, 212, 218, 230, 2960, 3888, 4099, 4375, 4645
BsmBI CGTCTC 3 cut(s) 119, 633, 1465
BsmFI GGGAC 9 cut(s) 182, 212, 218, 230, 2960, 3888, 4099, 4375, 4645
BsmI GAATGC 1 cut(s) 4522
Bso31I GGTCTC 4 cut(s) 174, 186, 570, 594
Bsp119I TTCGAA 2 cut(s) 1316, 4205
Bsp1286I GDGCHC 5 cut(s) 1057, 1895, 1997, 2629, 4281
Bsp19I CCATGG 1 cut(s) 1983
BspDI ATCGAT 2 cut(s) 653, 1085
BspFNI CGCG 4 cut(s) 186, 1051, 4021, 4229
BspHI TCATGA 1 cut(s) 568
BspMAI CTGCAG 2 cut(s) 2512, 4726
BspMI ACCTGC 2 cut(s) 2527, 4246
BspPI GGATC 9 cut(s) 171, 183, 231, 1198, 1565, 1578, 2158, 4630, 4694
BspQI GCTCTTC 2 cut(s) 1650, 1710
BspT104I TTCGAA 2 cut(s) 1316, 4205
BspT107I GGYRCC 3 cut(s) 1960, 4276, 4691
BspTNI GGTCTC 4 cut(s) 174, 186, 570, 594
BsrBI CCGCTC 1 cut(s) 153
BsrDI GCAATG 5 cut(s) 1819, 2076, 3087, 3483, 3802
BsrFI RCCGGY 3 cut(s) 490, 612, 4901
BssAI RCCGGY 3 cut(s) 490, 612, 4901
BssECI CCNNGG 9 cut(s) 1186, 1358, 1931, 1983, 2279, 2435, 3951, 4190, 4327
BssNI GRCGYC 3 cut(s) 128, 407, 4634
BssT1I CCWWGG 3 cut(s) 1983, 4190, 4327
BstACI GRCGYC 3 cut(s) 128, 407, 4634
BstAPI GCANNNNNTGC 6 cut(s) 2234, 2519, 3143, 3664, 4432, 4718
BstBI TTCGAA 2 cut(s) 1316, 4205
BstDSI CCRYGG 1 cut(s) 1983
BstEII GGTNACC 1 cut(s) 502
BstENI CCTNNNNNAGG 3 cut(s) 1968, 2220, 3396
BstFNI CGCG 4 cut(s) 186, 1051, 4021, 4229
BstHHI GCGC 6 cut(s) 664, 964, 2366, 3550, 3862, 4231
BstNSI RCATGY 3 cut(s) 1850, 2621, 4504
BstPAI GACNNNNGTC 2 cut(s) 105, 2437
BstPI GGTNACC 1 cut(s) 502
BstSFI CTRYAG 5 cut(s) 2508, 2909, 4091, 4722, 4827
BstSLI GKGCMC 2 cut(s) 2629, 4281
BstUI CGCG 4 cut(s) 186, 1051, 4021, 4229
BstV2I GAAGAC 5 cut(s) 70, 291, 1799, 2889, 4629
BstX2I RGATCY 5 cut(s) 1190, 1501, 1526, 1570, 2150
BstXI CCANNNNNNTGG 1 cut(s) 2314
BstYI RGATCY 5 cut(s) 1190, 1501, 1526, 1570, 2150
Bsu15I ATCGAT 2 cut(s) 653, 1085
BsuI GTATCC 2 cut(s) 1946, 3598
BsuTUI ATCGAT 2 cut(s) 653, 1085
BtgI CCRYGG 1 cut(s) 1983
BtgZI GCGATG 2 cut(s) 756, 2549
BtrI CACGTC 1 cut(s) 648
BtsI GCAGTG 4 cut(s) 1026, 1111, 3160, 4719
BveI ACCTGC 2 cut(s) 2527, 4246
CaiI CAGNNNCTG 4 cut(s) 1193, 2153, 2572, 4718
CciI TCATGA 1 cut(s) 568
CfoI GCGC 6 cut(s) 664, 964, 2366, 3550, 3862, 4231
Cfr10I RCCGGY 3 cut(s) 490, 612, 4901
ClaI ATCGAT 2 cut(s) 653, 1085
CpoI CGGWCCG 1 cut(s) 634
CspCI CAANNNNNGTGG 4 cut(s) 1110, 1145, 4695, 4730
CspI CGGWCCG 1 cut(s) 634
EaeI YGGCCR 6 cut(s) 39, 638, 1131, 1227, 1928, 2129
EciI GGCGGA 4 cut(s) 378, 387, 997, 1012
Ecl136II GAGCTC 1 cut(s) 1893
Eco130I CCWWGG 3 cut(s) 1983, 4190, 4327
Eco24I GRGCYC 2 cut(s) 1057, 1895
Eco31I GGTCTC 4 cut(s) 174, 186, 570, 594
Eco53kI GAGCTC 1 cut(s) 1893
Eco57I CTGAAG 4 cut(s) 2702, 3414, 3719, 3725
Eco91I GGTNACC 1 cut(s) 502
EcoICRI GAGCTC 1 cut(s) 1893
EcoNI CCTNNNNNAGG 3 cut(s) 1968, 2220, 3396
EcoO109I RGGNCCY 1 cut(s) 2645
EcoO65I GGTNACC 1 cut(s) 502
EcoRI GAATTC 4 cut(s) 994, 3763, 3928, 4207
EcoT14I CCWWGG 3 cut(s) 1983, 4190, 4327
EcoT22I ATGCAT 2 cut(s) 2596, 4776
EcoT38I GRGCYC 2 cut(s) 1057, 1895
ErhI CCWWGG 3 cut(s) 1983, 4190, 4327
Esp3I CGTCTC 3 cut(s) 119, 633, 1465
FaqI GGGAC 9 cut(s) 182, 212, 218, 230, 2960, 3888, 4099, 4375, 4645
FauI CCCGC 3 cut(s) 146, 1066, 3613
FauNDI CATATG 2 cut(s) 2106, 3663
FbaI TGATCA 1 cut(s) 3814
FblI GTMKAC 1 cut(s) 1118
FriOI GRGCYC 2 cut(s) 1057, 1895
GlaI GCGC 6 cut(s) 663, 963, 2365, 3549, 3861, 4230
GsaI CCCAGC 3 cut(s) 1264, 1846, 3189
GsuI CTGGAG 5 cut(s) 1518, 1760, 1989, 2343, 4281
HhaI GCGC 6 cut(s) 664, 964, 2366, 3550, 3862, 4231
Hin1I GRCGYC 3 cut(s) 128, 407, 4634
Hin6I GCGC 6 cut(s) 662, 962, 2364, 3548, 3860, 4229
HinP1I GCGC 6 cut(s) 662, 962, 2364, 3548, 3860, 4229
HincII GTYRAC 5 cut(s) 759, 975, 2762, 4452, 4732
HindII GTYRAC 5 cut(s) 759, 975, 2762, 4452, 4732
HindIII AAGCTT 7 cut(s) 618, 1635, 2292, 3204, 3462, 4233, 4515
HpaI GTTAAC 1 cut(s) 4732
Hpy99I CGWCG 8 cut(s) 133, 326, 347, 409, 424, 427, 940, 4595
HpyCH4IV ACGT 6 cut(s) 128, 407, 626, 647, 4593, 4634
HpySE526I ACGT 6 cut(s) 128, 407, 626, 647, 4593, 4634
Hsp92I GRCGYC 3 cut(s) 128, 407, 4634
HspAI GCGC 6 cut(s) 662, 962, 2364, 3548, 3860, 4229
KroI GCCGGC 1 cut(s) 490
KroNI GCCGGC 1 cut(s) 492
Ksp22I TGATCA 1 cut(s) 3814
KspAI GTTAAC 1 cut(s) 4732
LguI GCTCTTC 2 cut(s) 1650, 1710
LmnI GCTCC 8 cut(s) 150, 679, 1007, 1516, 1992, 3134, 3580, 3634
MaeII ACGT 6 cut(s) 128, 407, 626, 647, 4593, 4634
MbiI CCGCTC 1 cut(s) 153
MfeI CAATTG 1 cut(s) 4373
MflI RGATCY 5 cut(s) 1190, 1501, 1526, 1570, 2150
MhlI GDGCHC 5 cut(s) 1057, 1895, 1997, 2629, 4281
MlsI TGGCCA 4 cut(s) 1133, 1229, 1930, 2131
MluNI TGGCCA 4 cut(s) 1133, 1229, 1930, 2131
MlyI GAGTC 6 cut(s) 83, 1277, 1289, 1351, 2653, 4759
MmeI TCCRAC 2 cut(s) 701, 4598
Mox20I TGGCCA 4 cut(s) 1133, 1229, 1930, 2131
Mph1103I ATGCAT 2 cut(s) 2596, 4776
MroNI GCCGGC 1 cut(s) 490
MroXI GAANNNNTTC 1 cut(s) 2123
MscI TGGCCA 4 cut(s) 1133, 1229, 1930, 2131
MseI TTAA 5 cut(s) 879, 1523, 1607, 3561, 4731
MslI CAYNNNNRTG 3 cut(s) 1016, 2622, 3282
Msp20I TGGCCA 4 cut(s) 1133, 1229, 1930, 2131
MspA1I CMGCKG 5 cut(s) 487, 2009, 2141, 2950, 4727
MunI CAATTG 1 cut(s) 4373
Mva1269I GAATGC 1 cut(s) 4522
MvnI CGCG 4 cut(s) 186, 1051, 4021, 4229
NaeI GCCGGC 1 cut(s) 492
NciI CCSGG 7 cut(s) 173, 197, 203, 221, 1323, 1481, 3522
NcoI CCATGG 1 cut(s) 1983
NdeI CATATG 2 cut(s) 2106, 3663
NgoMIV GCCGGC 1 cut(s) 490
NmuCI GTSAC 5 cut(s) 408, 502, 1585, 3476, 4653
NsiI ATGCAT 2 cut(s) 2596, 4776
NspI RCATGY 3 cut(s) 1850, 2621, 4504
NspV TTCGAA 2 cut(s) 1316, 4205
PagI TCATGA 1 cut(s) 568
PaqCI CACCTGC 2 cut(s) 2527, 4246
PciI ACATGT 1 cut(s) 2617
PciSI GCTCTTC 2 cut(s) 1650, 1710
PcsI WCGNNNNNNNCGW 2 cut(s) 3049, 4166
PctI GAATGC 1 cut(s) 4522
PdiI GCCGGC 1 cut(s) 492
PdmI GAANNNNTTC 1 cut(s) 2123
PflFI GACNNNGTC 1 cut(s) 4159
PflMI CCANNNNNTGG 1 cut(s) 4304
PfoI TCCNGGA 1 cut(s) 2551
PleI GAGTC 6 cut(s) 83, 1276, 1288, 1350, 2653, 4759
PpsI GAGTC 6 cut(s) 83, 1276, 1288, 1350, 2653, 4759
PpuMI RGGWCCY 1 cut(s) 2645
PscI ACATGT 1 cut(s) 2617
PshAI GACNNNNGTC 2 cut(s) 105, 2437
Psp124BI GAGCTC 1 cut(s) 1895
Psp5II RGGWCCY 1 cut(s) 2645
PspEI GGTNACC 1 cut(s) 502
PspFI CCCAGC 3 cut(s) 1260, 1842, 3185
PspPPI RGGWCCY 1 cut(s) 2645
PstI CTGCAG 2 cut(s) 2512, 4726
PstNI CAGNNNCTG 4 cut(s) 1193, 2153, 2572, 4718
PsuI RGATCY 5 cut(s) 1190, 1501, 1526, 1570, 2150
PsyI GACNNNGTC 1 cut(s) 4159
PvuII CAGCTG 3 cut(s) 2009, 2141, 4727
RseI CAYNNNNRTG 3 cut(s) 1016, 2622, 3282
Rsr2I CGGWCCG 1 cut(s) 634
RsrII CGGWCCG 1 cut(s) 634
SacI GAGCTC 1 cut(s) 1895
SapI GCTCTTC 2 cut(s) 1650, 1710
SaqAI TTAA 5 cut(s) 879, 1523, 1607, 3561, 4731
SchI GAGTC 6 cut(s) 83, 1277, 1289, 1351, 2653, 4759
SduI GDGCHC 5 cut(s) 1057, 1895, 1997, 2629, 4281
SfcI CTRYAG 5 cut(s) 2508, 2909, 4091, 4722, 4827
SfuI TTCGAA 2 cut(s) 1316, 4205
SmiMI CAYNNNNRTG 3 cut(s) 1016, 2622, 3282
SmlI CTYRAG 2 cut(s) 783, 3201
SmoI CTYRAG 2 cut(s) 783, 3201
SspI AATATT 2 cut(s) 1768, 3061
SstI GAGCTC 1 cut(s) 1895
StyI CCWWGG 3 cut(s) 1983, 4190, 4327
TaiI ACGT 6 cut(s) 131, 410, 629, 650, 4596, 4637
TaqII GACCGA 1 cut(s) 222
TatI WGTACW 3 cut(s) 3333, 4482, 4532
TauI GCSGC 7 cut(s) 41, 360, 363, 366, 748, 2953, 4229
Tru1I TTAA 5 cut(s) 879, 1523, 1607, 3561, 4731
Tru9I TTAA 5 cut(s) 879, 1523, 1607, 3561, 4731
TseFI GTSAC 5 cut(s) 408, 502, 1585, 3476, 4653
Tsp45I GTSAC 5 cut(s) 408, 502, 1585, 3476, 4653
TspGWI ACGGA 7 cut(s) 285, 517, 1616, 1691, 1903, 3496, 3601
Tth111I GACNNNGTC 1 cut(s) 4159
Van91I CCANNNNNTGG 1 cut(s) 4304
VneI GTGCAC 1 cut(s) 2625
XagI CCTNNNNNAGG 3 cut(s) 1968, 2220, 3396
XbaI TCTAGA 1 cut(s) 926
XceI RCATGY 3 cut(s) 1850, 2621, 4504
XmaJI CCTAGG 1 cut(s) 4327
XmiI GTMKAC 1 cut(s) 1118
XmnI GAANNNNTTC 1 cut(s) 2123
ZraI GACGTC 3 cut(s) 129, 408, 4635
Zsp2I ATGCAT 2 cut(s) 2596, 4776
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.