Prupe.1G013200_v2.0.a1

TPL-binding domain in jasmonate signalling

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0007814
Physical Location & Seq
Forward (+)
1003915 .. 1012843
8929 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G013200.1

Sequence Viewer

Length: 4050 bp
ATGGACGAAGGTGTGAGATCTGTTGGCCCTTCTGGGGTGTTGGTGAAGAACAGAAATTCTTCAGGTTGCTTAATTGTTAGAAAGAAACCGGATGGGTTGAGTGGTGGTGTCGGTTCTTCGAGTTCTCGGAAGGTTTTTGAACCGAAGAAGGAGAAGAAAAGGTCGAGGTTGGTCTTAAGCGATTCAGGGTCCAGTGATGAGATAATGGTGCCTCCGCCTCCCCGTAGAAAGGTAGGCTCTGAAACTCTTCGGGTTTGTAATGGTTTAAGAGCATTAGATAAGGGCGCTGTTGAAGGGAGCGAAGTTGGTCAAAAGAGGGAAAGATTGGAACATGCTAGGCGTGATGAGGATGGTATGATCGGTAAAAGTTTTTTGGATGAGAGTGGAGGAAAGAGAAGTAAGTTGGAGGTGTTTGAATTCGATGAGTATGATGCAGAAATTATGCGAAGGAAACGGTTCAATGATGGGGTAGTTGATTTTGGGGGAAGAAGGTTTTCCGGATCACAAAGTGGCATTAAGAGGGAATTTGAAACTAGTTCAGGTAGACATGCCGTTGACAAGAGGAAGAATTTGTACTTTGACAGGACAAGTAGCTTGAATCGGGGAGATCATACTGACAGGGGTAGGTTTGAGATGAATAGGGATGGAGCTCAGCTGCCCTTATTGAGAGACAAGTTCATGGGTCAATCAGAGGAGTCCATTAGGCTACAGGGTAAAAATGGTGTTTTGAAGGTCATGGTGAAGAAGAAAAATAATTTGGGTGGGCCACTGGAGAACTATAATTTTCACAAATCTAAAGAAAGTAGAAAGGCTCCAAGGAGTGAAGATATTGCGAAGAATGTTATTGTCCCTCCATTTTACTCAGAACCAAAGCTTCTTGAGAAACCAGTTTCAGTTGTTAGGACAGAGAAAAACCATGTGAATTTGCGAAAATCATTACCCACTAAGAGCAGTAAGGGCTCCGACTCTGATTCAGAGGATAGTGATACATCGTTGAAGCTCGGACCAAAGAATGTGGAAGCCTCTAAACCAATGAAGAGGGCCGTTTGCAAAGATGAAGATGCTCCTTCATGTGAAAAGACTCCTCCAATCAGAATCAAAGAAGGTAAAGTTAGACGTGGTAGTGGCACGGAGAAGCAAAAACTACGTGAAAGAATACGGGAGATGCTCCTGACTGCAGGCTGGACAATAGATTATAGGCCTAGAAGGAACAGAGACTACCTAGATGCTGTGTACATTAACCCAGCAGGTACAGCTTACTGGTCCATCATTAAGGCTTATGATGCGCTTCAAAAGCAATTAAATGAGGAAAGTGAGGCTAAACGTAGTGCGGAGGGGTCTTCATTTTCACCTATAACTGATGATGTACTCAGCCAATTAACCAGGAAAACTCGAAAGAAGATTGAGAAAGAAATGAAAAAGAAGCATAGGGTTGATGCTGATAGTGAGAATGCAAGAGGAGTCCGTATAAAAAGATCTTCAAGTGTCAAGCATGATCCAGACAGCATGGATAGTGTTAGTTACGAGGAGAAACTAAGCTCCTACTTAAAGCAGGGTGGTAAGTCATTCAAGGGTAAAATGAACGAAAATGGTTTTGCCAGTGTGAACTCAAATGGGCAGAATACCTCTCATCATTTACATGACAGTGTTGAAAAACCGTCCTCAGGATCTAGTTCTCATATGCCACATGGAAGGAAAAGTAGGAAGCTTGGAAGGTGTACTTTGTTGGTTCGTGGTTCTAAACAGGGGGCAAACTCAGAAAGTGATGGCTATGTTCCATATACTGGAAAAAGGACTTTGCTTTCCTGGCTGATTGACTCTGGAACTGTGCAGTTGAGCCAAAAGGTGCAGTATATGAATCGTCGAAGGACTAAAGTAATGCTGGAAGGGTGGATTACAAGAGATGGCATTCACTGTGGTTGCTGTAGTAAAATCCTAACAATCTCAAAATTTGAGATTCATGCGGGAAGCAAATTGCGCCAGCCATTTCAAAATATATGTTTGGATTCTGGGGTTTCCCTTCTGCAATGTCAGATAGATGCATGGAATAGACAAGAGGATATTGAACGCATTGGTTTCCACTCTGTACAAGTTGACGGTGATGATCCTGATGATGATACTTGTGGCCTCTGTGGAGATGGTGGGGATTTGATCTGTTGTGATAGCTGTCCATCAACATTTCATCAGAGCTGCTTGAATATACAGATGCTTCCTCCAGGTGATTGGCACTGTCCAAATTGTACATGCAAATTTTGTGGGATAGCAAGTGAGAATGTTGCTGAAGAGGATGATACAACTGTTTCTGCACTGCTCACTTGCAGCCTCTGTGGAAAAAAAAGTCATATATCATGTAGTCAGGAAATGGATGTTAGTCCTGCTGATTCTCCTTGTTTAGGCTCTTCCTTCTGTGGACAGAAATGCAGAGAGCTCTTTGAGAATTTGAAGAAGTATCTTGGGGTCAAACATGAACTAGAAGCAGGATTTTCATGGACGCTTGTTCATAGAACAGATGAAGATCAAGGGTTTCCTCAAAGAGTCGAAAGCAATTCTAAGCTTGCTGTTGCTTTGACTGTTATGGATGAATGTTTTCTGCCTATTGTTGACAGGAGGAGTGGGATCAATTTAATTCATAATGTTCTTTATAATTGTGGATCGAACTTCAATCGACTGAACTACGGTGGATTCTACACCGCTATCTTAGAGAGAGGTGATGAAATAATTTCTGCGGCATCTATCAGGTTTCACGGTACAAAGTTAGCAGAGATGCCATTCATTGGAACTCGTCACATATATAGGCGACAAGGGATGTGCCGTCGGCTTTTTTATGCCATTGAATCGGCTCTATGCTCTCTAAAGGTTGAGAAATTAATTATCCCTGCAATTGCGGAACTCATGCATACATGGACAGAAGTTTTTGGTTTTATTTCTATTGAGGAATCGTTCAAGCAAGAAATGAGGTCGATGAATATGTTAGTGTTCCCTGGTATAGACATGCTACAGAAGTTGTTAGCAGATCAAGAAAATGAGGGGAACATGACAGCCAACACAGATTTAAAGCAAATGGATTGCGAAGGCAAGGATTGTATAAAGCCTGGGGGCAGAAGCAAATCAGACATTGGTTCTCCGGCTAGTCTTGATGGCCATGGGTCTGATGAAGCTGGTTTGCGTCCTATCAATGAAACAGTTGATGAAGATGCTGCTACGGATTCTGGTTCACGACGTATCCGTGTCTCCTTAAATGATACTCCTGTGATGAGTGGTTCATTAGATGCTTCTGATGAACTTAAAAATTTAGATTCCACTGAAAGGAGTATATCTTCTGACTCTGCTTCAGGGGCTGAATTGGCTGGATCTACTTTTGACAAGGAATTCCCTCCTATTAATACAAGCCATGAAGCTCTAGAGACAGAAAATAAACCAGTGCTGGATTCTCCTGTTGAAGATAAAATGCAGTCTACCTCTCAGGGGGCTGGTGCTTCTTTAAATAACACTTCCATGTTGAGTAGTAGGTCGTCAGATGCTTCTAATGAACGTAACATTCAGGTTTCAAACAAGGGGACTACATCTTCTGACTCTGATTCAGAAACCAAGTCAGCAGAATACGCTTCTGATGCAAAATGCCAGTCACACCCTGATACAGGCCACAATAAAAAGGTGGAAATAGAATCCATTTTGGATACTTCTCTGAAAGAAAACTCTTCAAAGTCTTTGGAAGAAGGTGCTTTGGATGATTCCTGCGAAGATGATTCCCATGAAGAGACTGTTGATGTTGCCTGTCTTGAGCCTATTAACTCTTCAGGAGAAACTTTTGCAAAGAACACCAAGGAGGAAGCTAATGGAAATCCAGATTCCAGTTTCTGTGATGCAAATGAGAGTTCCTTGCCAAATAAATGTGATTTGGATATTCAGTTTGATTGTGAGACTAAAAACGAATCATGCGTGGCTTCAGAAGTTGCTTCCGATGCAATGGATTGTGAAAAGAGCCTTCCTCAAGCATCTAGTGATGGTTCCAGGACTGATTCTGGGAAGGCTGAATCTGGTTCTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000118 GO:0000122 GO:0000228 GO:0000785 GO:0000790 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003824 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005700 GO:0006323 GO:0006325 GO:0006338 GO:0006355 GO:0006357 GO:0006996 GO:0007063 GO:0007276 GO:0007283 GO:0008150 GO:0008270 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010629 GO:0010639 GO:0010948 GO:0016043 GO:0016462 GO:0016581 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017053 GO:0017111 GO:0019219 GO:0019222 GO:0019953 GO:0022414 GO:0030261 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031491 GO:0031974 GO:0031981 GO:0032501 GO:0032504 GO:0032879 GO:0032880 GO:0032991 GO:0033043 GO:0033044 GO:0033045 GO:0033046 GO:0034728 GO:0035327 GO:0042623 GO:0042766 GO:0043044 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044703 GO:0044877 GO:0045786 GO:0045875 GO:0045892 GO:0045934 GO:0046872 GO:0046914 GO:0048232 GO:0048519 GO:0048523 GO:0048609 GO:0050789 GO:0050794 GO:0051098 GO:0051101 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051312 GO:0051704 GO:0051726 GO:0051983 GO:0051985 GO:0060255 GO:0060341 GO:0065007 GO:0065009 GO:0070013 GO:0070603 GO:0070615 GO:0071103 GO:0071824 GO:0071840 GO:0071922 GO:0071923 GO:0080090 GO:0090545 GO:0090568 GO:0097159 GO:1901363 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:1903827 GO:1903828 GO:1904949 GO:1905634 GO:2000112 GO:2000113 GO:2001141 GO:2001251
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Jas PHD

Protein Analysis

1350

Amino Acids

148.74

Weight (kDa)

6.12

Isoelectric Point (pI)

54.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2643
Acc36I ACCTGC 1 cut(s) 1238
AccB1I GGYRCC 1 cut(s) 208
AccB7I CCANNNNNTGG 2 cut(s) 1784, 2774
AccI GTMKAC 2 cut(s) 544, 3455
AccIII TCCGGA 1 cut(s) 497
AciI CCGC 6 cut(s) 215, 1331, 1964, 2691, 2726, 2885
AclWI GGATC 7 cut(s) 508, 1490, 1675, 2099, 2624, 2659, 3358
AcoI YGGCCR 1 cut(s) 3139
AcuI CTGAAG 5 cut(s) 45, 2301, 3315, 3780, 3930
AdeI CACNNNGTG 1 cut(s) 509
AfaI GTAC 8 cut(s) 575, 1235, 1252, 1368, 1720, 2088, 2242, 2749
AfiI CCNNNNNNNGG 9 cut(s) 34, 229, 1664, 1784, 2393, 2774, 3306, 3465, 3638
AflII CTTAAG 1 cut(s) 175
AhlI ACTAGT 1 cut(s) 533
AjiI CACGTC 1 cut(s) 1118
AjnI CCWGG 6 cut(s) 1382, 1805, 2215, 2980, 3091, 4010
AjuI GAANNNNNNNTTGG 2 cut(s) 740, 772
Alw21I GWGCWC 2 cut(s) 652, 2430
Alw26I GTCTC 6 cut(s) 663, 1209, 3235, 3398, 3752, 3914
AlwI GGATC 7 cut(s) 508, 1490, 1675, 2099, 2624, 2659, 3358
AlwNI CAGNNNCTG 3 cut(s) 2325, 3338, 3858
Aor13HI TCCGGA 1 cut(s) 497
AoxI GGCC 7 cut(s) 25, 764, 1041, 1199, 2125, 3139, 3640
ApeKI GCWGC 4 cut(s) 655, 2190, 2319, 3197
ArsI GACNNNNNNTTYG 2 cut(s) 3608, 3640
AseI ATTAAT 2 cut(s) 2867, 3381
Asp700I GAANNNNTTC 5 cut(s) 58, 246, 455, 493, 2586
AspLEI GCGC 3 cut(s) 287, 1288, 1980
AspS9I GGNCC 6 cut(s) 26, 189, 764, 1004, 1041, 1263
AsuHPI GGTGA 6 cut(s) 55, 751, 1341, 2111, 2231, 2720
AvaII GGWCC 3 cut(s) 189, 1004, 1263
AxyI CCTNAGG 1 cut(s) 1663
BaeI ACNNNNGTAYC 4 cut(s) 2283, 2316, 3234, 3267
BalI TGGCCA 1 cut(s) 3141
BanI GGYRCC 1 cut(s) 208
BanII GRGCYC 3 cut(s) 652, 962, 2430
BarI GAAGNNNNNNTAC 2 cut(s) 557, 589
BbsI GAAGAC 1 cut(s) 1332
Bbv12I GWGCWC 2 cut(s) 652, 2430
BbvI GCAGC 4 cut(s) 642, 2177, 2331, 3184
BceAI ACGGC 3 cut(s) 536, 1028, 2796
BciT130I CCWGG 6 cut(s) 1384, 1807, 2217, 2982, 3093, 4012
BciVI GTATCC 2 cut(s) 3233, 3670
BcoDI GTCTC 6 cut(s) 663, 1209, 3235, 3398, 3752, 3914
BcuI ACTAGT 1 cut(s) 533
BfaI CTAG 9 cut(s) 336, 534, 1203, 1223, 1671, 2471, 3129, 3401, 3999
BfmI CTRYAG 4 cut(s) 707, 1176, 1924, 2996
BfoI RGCGCY 1 cut(s) 288
BfrI CTTAAG 1 cut(s) 175
BfuAI ACCTGC 1 cut(s) 1238
BfuI GTATCC 2 cut(s) 3233, 3670
BglII AGATCT 2 cut(s) 17, 1475
BisI GCNGC 5 cut(s) 656, 2191, 2320, 2727, 3198
BlpI GCTNAGC 1 cut(s) 651
BlsI GCNGC 5 cut(s) 657, 2192, 2321, 2728, 3199
Bme1390I CCNGG 6 cut(s) 1384, 1807, 2217, 2982, 3093, 4012
Bme18I GGWCC 3 cut(s) 189, 1004, 1263
BmgBI CACGTC 1 cut(s) 1118
BmgT120I GGNCC 6 cut(s) 26, 189, 764, 1004, 1041, 1263
BmiI GGNNCC 5 cut(s) 190, 210, 813, 961, 4009
BmrFI CCNGG 6 cut(s) 1384, 1807, 2217, 2982, 3093, 4012
BpiI GAAGAC 1 cut(s) 1332
BplI GAGNNNNNCTC 2 cut(s) 3973, 4005
BpmI CTGGAG 2 cut(s) 791, 2199
Bpu1102I GCTNAGC 1 cut(s) 651
BpuEI CTTGAG 3 cut(s) 899, 3800, 3975
BsaAI YACGTR 1 cut(s) 1148
BsaBI GATNNNNATC 1 cut(s) 2514
BsaJI CCNNGG 5 cut(s) 815, 2980, 3092, 3142, 3822
BsaWI WCCGGW 2 cut(s) 88, 497
Bsc4I CCNNNNNNNGG 9 cut(s) 34, 229, 1664, 1784, 2393, 2774, 3306, 3465, 3638
Bse1I ACTGG 9 cut(s) 192, 774, 887, 1265, 1599, 1789, 3419, 3622, 3852
Bse21I CCTNAGG 1 cut(s) 1663
Bse3DI GCAATG 2 cut(s) 2033, 3972
Bse8I GATNNNNATC 1 cut(s) 2514
BseAI TCCGGA 1 cut(s) 497
BseBI CCWGG 6 cut(s) 1384, 1807, 2217, 2982, 3093, 4012
BseDI CCNNGG 5 cut(s) 815, 2980, 3092, 3142, 3822
BseGI GGATG 9 cut(s) 97, 355, 382, 649, 2293, 2371, 2584, 2811, 3733
BseJI GATNNNNATC 1 cut(s) 2514
BseLI CCNNNNNNNGG 9 cut(s) 34, 229, 1664, 1784, 2393, 2774, 3306, 3465, 3638
BseMI GCAATG 2 cut(s) 2033, 3972
BseMII CTCAG 6 cut(s) 665, 876, 1384, 1677, 1770, 3476
BseNI ACTGG 9 cut(s) 192, 774, 887, 1265, 1599, 1789, 3419, 3622, 3852
BseRI GAGGAG 5 cut(s) 707, 1074, 1473, 1541, 2623
BseXI GCAGC 4 cut(s) 642, 2177, 2331, 3184
BseYI CCCAGC 1 cut(s) 1243
BsgI GTGCAG 3 cut(s) 1850, 1868, 2289
BshFI GGCC 7 cut(s) 27, 766, 1043, 1201, 2127, 3141, 3642
BshNI GGYRCC 1 cut(s) 208
BsiHKAI GWGCWC 2 cut(s) 652, 2430
BsiSI CCGG 3 cut(s) 89, 498, 3125
BslFI GGGAC 2 cut(s) 833, 3571
BslI CCNNNNNNNGG 9 cut(s) 34, 229, 1664, 1784, 2393, 2774, 3306, 3465, 3638
BsmAI GTCTC 6 cut(s) 663, 1209, 3235, 3398, 3752, 3914
BsmFI GGGAC 2 cut(s) 833, 3571
BsmI GAATGC 2 cut(s) 1456, 1908
BsnI GGCC 7 cut(s) 27, 766, 1043, 1201, 2127, 3141, 3642
Bsp1286I GDGCHC 3 cut(s) 652, 962, 2430
Bsp13I TCCGGA 1 cut(s) 497
Bsp1407I TGTACA 3 cut(s) 1233, 2086, 2240
Bsp1720I GCTNAGC 1 cut(s) 651
Bsp19I CCATGG 1 cut(s) 3142
BspACI CCGC 6 cut(s) 215, 1331, 1964, 2691, 2726, 2885
BspANI GGCC 7 cut(s) 27, 766, 1043, 1201, 2127, 3141, 3642
BspCNI CTCAG 6 cut(s) 664, 875, 1383, 1676, 1769, 3475
BspEI TCCGGA 1 cut(s) 497
BspLI GGNNCC 5 cut(s) 190, 210, 813, 961, 4009
BspMAI CTGCAG 1 cut(s) 1180
BspMI ACCTGC 1 cut(s) 1238
BspPI GGATC 7 cut(s) 508, 1490, 1675, 2099, 2624, 2659, 3358
BspQI GCTCTTC 1 cut(s) 2404
BspT107I GGYRCC 1 cut(s) 208
BspTI CTTAAG 1 cut(s) 175
BsrDI GCAATG 2 cut(s) 2033, 3972
BsrGI TGTACA 3 cut(s) 1233, 2086, 2240
BsrI ACTGG 9 cut(s) 192, 774, 887, 1265, 1599, 1789, 3419, 3622, 3852
BssECI CCNNGG 5 cut(s) 815, 2980, 3092, 3142, 3822
BssT1I CCWWGG 3 cut(s) 815, 3142, 3822
Bst2UI CCWGG 6 cut(s) 1384, 1807, 2217, 2982, 3093, 4012
Bst6I CTCTTC 7 cut(s) 252, 1031, 2277, 2404, 3703, 3750, 3799
BstAFI CTTAAG 1 cut(s) 175
BstAUI TGTACA 3 cut(s) 1233, 2086, 2240
BstBAI YACGTR 1 cut(s) 1148
BstC8I GCNNGC 3 cut(s) 1180, 1982, 2556
BstDSI CCRYGG 1 cut(s) 3142
BstENI CCTNNNNNAGG 2 cut(s) 2391, 3636
BstF5I GGATG 9 cut(s) 97, 355, 382, 649, 2293, 2371, 2584, 2811, 3733
BstH2I RGCGCY 1 cut(s) 288
BstHHI GCGC 3 cut(s) 287, 1288, 1980
BstMAI GTCTC 6 cut(s) 663, 1209, 3235, 3398, 3752, 3914
BstNI CCWGG 6 cut(s) 1384, 1807, 2217, 2982, 3093, 4012
BstNSI RCATGY 4 cut(s) 335, 551, 2247, 2995
BstSCI CCNGG 6 cut(s) 1382, 1805, 2215, 2980, 3091, 4010
BstSFI CTRYAG 4 cut(s) 707, 1176, 1924, 2996
BstV1I GCAGC 4 cut(s) 642, 2177, 2331, 3184
BstV2I GAAGAC 1 cut(s) 1332
BstX2I RGATCY 4 cut(s) 17, 1475, 1667, 3350
BstXI CCANNNNNNTGG 1 cut(s) 2223
BstYI RGATCY 4 cut(s) 17, 1475, 1667, 3350
Bsu36I CCTNAGG 1 cut(s) 1663
BsuI GTATCC 2 cut(s) 3233, 3670
BsuRI GGCC 7 cut(s) 27, 766, 1043, 1201, 2127, 3141, 3642
BtgI CCRYGG 1 cut(s) 3142
BtrI CACGTC 1 cut(s) 1118
BtsCI GGATG 9 cut(s) 97, 355, 382, 649, 2293, 2371, 2584, 2811, 3733
BtsI GCAGTG 1 cut(s) 2306
BtsIMutI CAGTG 9 cut(s) 199, 767, 1606, 1651, 1912, 2227, 2306, 3300, 3426
BveI ACCTGC 1 cut(s) 1238
Cac8I GCNNGC 3 cut(s) 1180, 1982, 2556
CaiI CAGNNNCTG 3 cut(s) 2325, 3338, 3858
CfoI GCGC 3 cut(s) 287, 1288, 1980
Cfr13I GGNCC 6 cut(s) 26, 189, 764, 1004, 1041, 1263
CseI GACGC 2 cut(s) 2500, 3155
Csp6I GTAC 8 cut(s) 574, 1234, 1251, 1367, 1719, 2087, 2241, 2748
CspCI CAANNNNNGTGG 4 cut(s) 996, 1031, 2236, 2271
CviQI GTAC 8 cut(s) 574, 1234, 1251, 1367, 1719, 2087, 2241, 2748
DraI TTTAAA 2 cut(s) 3054, 3483
DraIII CACNNNGTG 1 cut(s) 509
EaeI YGGCCR 1 cut(s) 3139
Eam1104I CTCTTC 7 cut(s) 252, 1031, 2277, 2404, 3703, 3750, 3799
EarI CTCTTC 7 cut(s) 252, 1031, 2277, 2404, 3703, 3750, 3799
EciI GGCGGA 1 cut(s) 204
Ecl136II GAGCTC 2 cut(s) 650, 2428
Eco130I CCWWGG 3 cut(s) 815, 3142, 3822
Eco147I AGGCCT 1 cut(s) 1201
Eco24I GRGCYC 3 cut(s) 652, 962, 2430
Eco47I GGWCC 3 cut(s) 189, 1004, 1263
Eco53kI GAGCTC 2 cut(s) 650, 2428
Eco57I CTGAAG 5 cut(s) 45, 2301, 3315, 3780, 3930
Eco81I CCTNAGG 1 cut(s) 1663
EcoICRI GAGCTC 2 cut(s) 650, 2428
EcoNI CCTNNNNNAGG 2 cut(s) 2391, 3636
EcoRI GAATTC 2 cut(s) 416, 3368
EcoRII CCWGG 6 cut(s) 1382, 1805, 2215, 2980, 3091, 4010
EcoT14I CCWWGG 3 cut(s) 815, 3142, 3822
EcoT22I ATGCAT 2 cut(s) 2044, 2898
EcoT38I GRGCYC 3 cut(s) 652, 962, 2430
ErhI CCWWGG 3 cut(s) 815, 3142, 3822
FalI AAGNNNNNCTT 2 cut(s) 1705, 1737
FaqI GGGAC 2 cut(s) 833, 3571
FauI CCCGC 1 cut(s) 1957
FauNDI CATATG 1 cut(s) 1680
FblI GTMKAC 2 cut(s) 544, 3455
Fnu4HI GCNGC 5 cut(s) 656, 2191, 2320, 2727, 3198
FokI GGATG 9 cut(s) 104, 362, 389, 656, 2300, 2378, 2591, 2818, 3740
FriOI GRGCYC 3 cut(s) 652, 962, 2430
Fsp4HI GCNGC 5 cut(s) 656, 2191, 2320, 2727, 3198
FspBI CTAG 9 cut(s) 336, 534, 1203, 1223, 1671, 2471, 3129, 3401, 3999
GlaI GCGC 3 cut(s) 286, 1287, 1979
GluI GCNGC 5 cut(s) 656, 2191, 2320, 2727, 3198
GsaI CCCAGC 1 cut(s) 1247
GsuI CTGGAG 2 cut(s) 791, 2199
HaeII RGCGCY 1 cut(s) 288
HaeIII GGCC 7 cut(s) 27, 766, 1043, 1201, 2127, 3141, 3642
HapII CCGG 3 cut(s) 89, 498, 3125
HgaI GACGC 2 cut(s) 2500, 3155
HhaI GCGC 3 cut(s) 287, 1288, 1980
Hin6I GCGC 3 cut(s) 285, 1286, 1978
HinP1I GCGC 3 cut(s) 285, 1286, 1978
HincII GTYRAC 3 cut(s) 556, 2095, 2602
HindII GTYRAC 3 cut(s) 556, 2095, 2602
HindIII AAGCTT 3 cut(s) 872, 1706, 2552
HpaII CCGG 3 cut(s) 89, 498, 3125
HphI GGTGA 6 cut(s) 55, 751, 1341, 2111, 2231, 2720
Hpy99I CGWCG 3 cut(s) 1866, 2817, 3222
HpyCH4IV ACGT 5 cut(s) 1117, 1147, 1324, 3220, 3532
HpySE526I ACGT 5 cut(s) 1117, 1147, 1324, 3220, 3532
HspAI GCGC 3 cut(s) 285, 1286, 1978
Kpn2I TCCGGA 1 cut(s) 497
LguI GCTCTTC 1 cut(s) 2404
LmnI GCTCC 7 cut(s) 297, 647, 817, 965, 1069, 1173, 1544
Lsp1109I GCAGC 4 cut(s) 642, 2177, 2331, 3184
MaeI CTAG 9 cut(s) 336, 534, 1203, 1223, 1671, 2471, 3129, 3401, 3999
MaeII ACGT 5 cut(s) 1117, 1147, 1324, 3220, 3532
MaeIII GTNAC 4 cut(s) 1520, 2783, 3533, 3624
MfeI CAATTG 1 cut(s) 2880
MflI RGATCY 4 cut(s) 17, 1475, 1667, 3350
MhlI GDGCHC 3 cut(s) 652, 962, 2430
MlsI TGGCCA 1 cut(s) 3141
MluNI TGGCCA 1 cut(s) 3141
MlyI GAGTC 8 cut(s) 704, 959, 1075, 1470, 1811, 2544, 3317, 3566
MmeI TCCRAC 2 cut(s) 384, 987
Mox20I TGGCCA 1 cut(s) 3141
Mph1103I ATGCAT 2 cut(s) 2044, 2898
MroI TCCGGA 1 cut(s) 497
MroXI GAANNNNTTC 5 cut(s) 58, 246, 455, 493, 2586
MscI TGGCCA 1 cut(s) 3141
MslI CAYNNNNRTG 3 cut(s) 1638, 1644, 3494
Msp20I TGGCCA 1 cut(s) 3141
MspA1I CMGCKG 1 cut(s) 655
MspCI CTTAAG 1 cut(s) 175
MspI CCGG 3 cut(s) 89, 498, 3125
MspR9I CCNGG 6 cut(s) 1384, 1807, 2217, 2982, 3093, 4012
MunI CAATTG 1 cut(s) 2880
Mva1269I GAATGC 2 cut(s) 1456, 1908
MvaI CCWGG 6 cut(s) 1384, 1807, 2217, 2982, 3093, 4012
NcoI CCATGG 1 cut(s) 3142
NdeI CATATG 1 cut(s) 1680
NlaIV GGNNCC 5 cut(s) 190, 210, 813, 961, 4009
NmuCI GTSAC 2 cut(s) 2783, 3624
NsiI ATGCAT 2 cut(s) 2044, 2898
NspI RCATGY 4 cut(s) 335, 551, 2247, 2995
PceI AGGCCT 1 cut(s) 1201
PciSI GCTCTTC 1 cut(s) 2404
PcsI WCGNNNNNNNCGW 2 cut(s) 3223, 3936
PctI GAATGC 2 cut(s) 1456, 1908
PdmI GAANNNNTTC 5 cut(s) 58, 246, 455, 493, 2586
PflMI CCANNNNNTGG 2 cut(s) 1784, 2774
PfoI TCCNGGA 1 cut(s) 4010
PkrI GCNGC 5 cut(s) 657, 2192, 2321, 2728, 3199
PleI GAGTC 8 cut(s) 703, 959, 1075, 1469, 1811, 2543, 3317, 3566
PpsI GAGTC 8 cut(s) 703, 959, 1075, 1469, 1811, 2543, 3317, 3566
Ppu21I YACGTR 1 cut(s) 1148
PshBI ATTAAT 2 cut(s) 2867, 3381
PsiI TTATAA 1 cut(s) 2643
Psp124BI GAGCTC 2 cut(s) 652, 2430
Psp6I CCWGG 6 cut(s) 1382, 1805, 2215, 2980, 3091, 4010
PspFI CCCAGC 1 cut(s) 1243
PspGI CCWGG 6 cut(s) 1382, 1805, 2215, 2980, 3091, 4010
PspN4I GGNNCC 5 cut(s) 190, 210, 813, 961, 4009
PspPI GGNCC 6 cut(s) 26, 189, 764, 1004, 1041, 1263
PsrI GAACNNNNNNTAC 2 cut(s) 1202, 1234
PstI CTGCAG 1 cut(s) 1180
PstNI CAGNNNCTG 3 cut(s) 2325, 3338, 3858
PsuI RGATCY 4 cut(s) 17, 1475, 1667, 3350
PvuII CAGCTG 1 cut(s) 655
RsaI GTAC 8 cut(s) 575, 1235, 1252, 1368, 1720, 2088, 2242, 2749
RsaNI GTAC 8 cut(s) 574, 1234, 1251, 1367, 1719, 2087, 2241, 2748
RseI CAYNNNNRTG 3 cut(s) 1638, 1644, 3494
SacI GAGCTC 2 cut(s) 652, 2430
SapI GCTCTTC 1 cut(s) 2404
SatI GCNGC 5 cut(s) 656, 2191, 2320, 2727, 3198
Sau96I GGNCC 6 cut(s) 26, 189, 764, 1004, 1041, 1263
SchI GAGTC 8 cut(s) 704, 959, 1075, 1470, 1811, 2544, 3317, 3566
ScrFI CCNGG 6 cut(s) 1384, 1807, 2217, 2982, 3093, 4012
SduI GDGCHC 3 cut(s) 652, 962, 2430
SfcI CTRYAG 4 cut(s) 707, 1176, 1924, 2996
SinI GGWCC 3 cut(s) 189, 1004, 1263
SmiMI CAYNNNNRTG 3 cut(s) 1638, 1644, 3494
SmlI CTYRAG 4 cut(s) 175, 878, 3779, 3990
SmoI CTYRAG 4 cut(s) 175, 878, 3779, 3990
SpeI ACTAGT 1 cut(s) 533
SseBI AGGCCT 1 cut(s) 1201
SsiI CCGC 6 cut(s) 215, 1331, 1964, 2691, 2726, 2885
SspMI CTAG 9 cut(s) 336, 534, 1203, 1223, 1671, 2471, 3129, 3401, 3999
SstI GAGCTC 2 cut(s) 652, 2430
StuI AGGCCT 1 cut(s) 1201
StyD4I CCNGG 6 cut(s) 1382, 1805, 2215, 2980, 3091, 4010
StyI CCWWGG 3 cut(s) 815, 3142, 3822
TaiI ACGT 5 cut(s) 1120, 1150, 1327, 3223, 3535
TaqI TCGA 9 cut(s) 119, 164, 420, 1393, 1864, 2538, 2654, 2665, 2960
TatI WGTACW 6 cut(s) 573, 1233, 1366, 1718, 2086, 2240
TauI GCSGC 1 cut(s) 2729
TscAI CASTG 9 cut(s) 199, 774, 1606, 1651, 1919, 2234, 2313, 3307, 3426
TseFI GTSAC 2 cut(s) 2783, 3624
TseI GCWGC 4 cut(s) 655, 2190, 2319, 3197
Tsp45I GTSAC 2 cut(s) 2783, 3624
TspGWI ACGGA 4 cut(s) 1145, 1454, 3215, 3218
TspRI CASTG 9 cut(s) 199, 774, 1606, 1651, 1919, 2234, 2313, 3307, 3426
Van91I CCANNNNNTGG 2 cut(s) 1784, 2774
Vha464I CTTAAG 1 cut(s) 175
VpaK11BI GGWCC 3 cut(s) 189, 1004, 1263
VspI ATTAAT 2 cut(s) 2867, 3381
XagI CCTNNNNNAGG 2 cut(s) 2391, 3636
XbaI TCTAGA 1 cut(s) 3400
XceI RCATGY 4 cut(s) 335, 551, 2247, 2995
XmiI GTMKAC 2 cut(s) 544, 3455
XmnI GAANNNNTTC 5 cut(s) 58, 246, 455, 493, 2586
XspI CTAG 9 cut(s) 336, 534, 1203, 1223, 1671, 2471, 3129, 3401, 3999
Zsp2I ATGCAT 2 cut(s) 2044, 2898
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.