TPL-binding domain in jasmonate signalling
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G05380 AT1G05380 AT1G05380 AT4G14920 AT4G14920 AT4G14920 |
| fragaria_vesca | FvH4_4g15500 FvH4_4g15500 |
| malus_domestica | MD13G1192700.v1.1 MD16G1193400.v1.1 |
| prunus_persica | Prupe.1G013200_v2.0.a1 Prupe.1G013200_v2.0.a1 |
| pyrus_communis | pycom13g16500 pycom16g16310 |
| rosa_chinensis | RchiOBHm_Chr4g0416261 |
| rosa_laevigata | RLG00000008000 |
| rosa_multiflora | Rmu_sc0001145.1_g000013 |
| rosa_roxburghii | Rroxscaffold_5G00360120 |
| rosa_rugosa | Rorug04G0140500 |
| rosa_samantha | Rh4AG202400 Rh4BG199900 Rh4CG213300 Rh4DG199700 |
| rosa_wichuraiana | Rw4G017140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 43 |
| Acc36I | ACCTGC | 2 cut(s) | 43, 150 |
| AccB1I | GGYRCC | 1 cut(s) | 55 |
| AclI | AACGTT | 1 cut(s) | 36 |
| AclWI | GGATC | 2 cut(s) | 8, 21 |
| AfaI | GTAC | 1 cut(s) | 114 |
| AluBI | AGCT | 1 cut(s) | 206 |
| AluI | AGCT | 1 cut(s) | 206 |
| Alw26I | GTCTC | 1 cut(s) | 153 |
| AlwI | GGATC | 2 cut(s) | 8, 21 |
| AseI | ATTAAT | 1 cut(s) | 123 |
| BamHI | GGATCC | 1 cut(s) | 13 |
| BanI | GGYRCC | 1 cut(s) | 55 |
| BcoDI | GTCTC | 1 cut(s) | 153 |
| BfaI | CTAG | 1 cut(s) | 156 |
| BfuAI | ACCTGC | 2 cut(s) | 43, 150 |
| BglII | AGATCT | 1 cut(s) | 140 |
| BmiI | GGNNCC | 3 cut(s) | 7, 15, 57 |
| BsaJI | CCNNGG | 1 cut(s) | 9 |
| BsaWI | WCCGGW | 1 cut(s) | 22 |
| Bse118I | RCCGGY | 1 cut(s) | 58 |
| Bse1I | ACTGG | 1 cut(s) | 71 |
| Bse3DI | GCAATG | 1 cut(s) | 180 |
| BseDI | CCNNGG | 1 cut(s) | 9 |
| BseMI | GCAATG | 1 cut(s) | 180 |
| BseNI | ACTGG | 1 cut(s) | 71 |
| BshNI | GGYRCC | 1 cut(s) | 55 |
| BsiSI | CCGG | 2 cut(s) | 23, 59 |
| BsmAI | GTCTC | 1 cut(s) | 153 |
| Bsp143I | GATC | 2 cut(s) | 13, 140 |
| BspLI | GGNNCC | 3 cut(s) | 7, 15, 57 |
| BspMI | ACCTGC | 2 cut(s) | 43, 150 |
| BspPI | GGATC | 2 cut(s) | 8, 21 |
| BspT107I | GGYRCC | 1 cut(s) | 55 |
| BsrDI | GCAATG | 1 cut(s) | 180 |
| BsrFI | RCCGGY | 1 cut(s) | 58 |
| BsrI | ACTGG | 1 cut(s) | 71 |
| BssAI | RCCGGY | 1 cut(s) | 58 |
| BssECI | CCNNGG | 1 cut(s) | 9 |
| BssMI | GATC | 2 cut(s) | 13, 140 |
| BssT1I | CCWWGG | 1 cut(s) | 9 |
| Bst4CI | ACNGT | 1 cut(s) | 96 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 165 |
| BstKTI | GATC | 2 cut(s) | 16, 143 |
| BstMAI | GTCTC | 1 cut(s) | 153 |
| BstMBI | GATC | 2 cut(s) | 13, 140 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 165 |
| BstX2I | RGATCY | 2 cut(s) | 13, 140 |
| BstYI | RGATCY | 2 cut(s) | 13, 140 |
| BveI | ACCTGC | 2 cut(s) | 43, 150 |
| Cfr10I | RCCGGY | 1 cut(s) | 58 |
| Csp6I | GTAC | 1 cut(s) | 113 |
| CviAII | CATG | 1 cut(s) | 165 |
| CviJI | RGCY | 2 cut(s) | 174, 206 |
| CviKI_1 | RGCY | 2 cut(s) | 174, 206 |
| CviQI | GTAC | 1 cut(s) | 113 |
| DpnI | GATC | 2 cut(s) | 15, 142 |
| DpnII | GATC | 2 cut(s) | 13, 140 |
| Eco130I | CCWWGG | 1 cut(s) | 9 |
| EcoT14I | CCWWGG | 1 cut(s) | 9 |
| ErhI | CCWWGG | 1 cut(s) | 9 |
| FaeI | CATG | 1 cut(s) | 168 |
| FaiI | YATR | 2 cut(s) | 166, 195 |
| FatI | CATG | 1 cut(s) | 164 |
| FspBI | CTAG | 1 cut(s) | 156 |
| HapII | CCGG | 2 cut(s) | 23, 59 |
| Hin1II | CATG | 1 cut(s) | 168 |
| HincII | GTYRAC | 1 cut(s) | 31 |
| HindII | GTYRAC | 1 cut(s) | 31 |
| HpaII | CCGG | 2 cut(s) | 23, 59 |
| Hpy166II | GTNNAC | 2 cut(s) | 31, 64 |
| Hpy188I | TCNGA | 1 cut(s) | 92 |
| Hpy188III | TCNNGA | 1 cut(s) | 150 |
| Hpy8I | GTNNAC | 2 cut(s) | 31, 64 |
| HpyCH4III | ACNGT | 1 cut(s) | 96 |
| HpyCH4IV | ACGT | 1 cut(s) | 36 |
| HpyCH4V | TGCA | 2 cut(s) | 168, 185 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 165 |
| HpySE526I | ACGT | 1 cut(s) | 36 |
| Hsp92II | CATG | 1 cut(s) | 168 |
| Kzo9I | GATC | 2 cut(s) | 13, 140 |
| LmnI | GCTCC | 1 cut(s) | 25 |
| LpnPI | CCDG | 6 cut(s) | 30, 36, 38, 52, 72, 145 |
| MaeI | CTAG | 1 cut(s) | 156 |
| MaeII | ACGT | 1 cut(s) | 36 |
| MalI | GATC | 2 cut(s) | 15, 142 |
| MboI | GATC | 2 cut(s) | 13, 140 |
| MflI | RGATCY | 2 cut(s) | 13, 140 |
| MluCI | AATT | 3 cut(s) | 81, 108, 128 |
| MmeI | TCCRAC | 1 cut(s) | 70 |
| MnlI | CCTC | 2 cut(s) | 36, 127 |
| MseI | TTAA | 3 cut(s) | 39, 84, 123 |
| MspI | CCGG | 2 cut(s) | 23, 59 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 165 |
| NdeII | GATC | 2 cut(s) | 13, 140 |
| NlaIII | CATG | 1 cut(s) | 168 |
| NlaIV | GGNNCC | 3 cut(s) | 7, 15, 57 |
| PaqCI | CACCTGC | 1 cut(s) | 43 |
| PshBI | ATTAAT | 1 cut(s) | 123 |
| Psp1406I | AACGTT | 1 cut(s) | 36 |
| PspN4I | GGNNCC | 3 cut(s) | 7, 15, 57 |
| PsuI | RGATCY | 2 cut(s) | 13, 140 |
| RsaI | GTAC | 1 cut(s) | 114 |
| RsaNI | GTAC | 1 cut(s) | 113 |
| SaqAI | TTAA | 3 cut(s) | 39, 84, 123 |
| Sau3AI | GATC | 2 cut(s) | 13, 140 |
| SetI | ASST | 4 cut(s) | 39, 57, 164, 208 |
| Sse9I | AATT | 3 cut(s) | 81, 108, 128 |
| SspMI | CTAG | 1 cut(s) | 156 |
| StyI | CCWWGG | 1 cut(s) | 9 |
| TaaI | ACNGT | 1 cut(s) | 96 |
| TaiI | ACGT | 1 cut(s) | 39 |
| TaqI | TCGA | 1 cut(s) | 151 |
| TasI | AATT | 3 cut(s) | 81, 108, 128 |
| TatI | WGTACW | 1 cut(s) | 112 |
| Tru1I | TTAA | 3 cut(s) | 39, 84, 123 |
| Tru9I | TTAA | 3 cut(s) | 39, 84, 123 |
| VspI | ATTAAT | 1 cut(s) | 123 |
| XspI | CTAG | 1 cut(s) | 156 |