Prupe.1G023600_v2.0.a1

Calmodulin-like protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
1659923 .. 1662734
2812 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G023600.2

Sequence Viewer

Length: 486 bp
ATGGCAGATGTTCTGAGTGAAGAACAGATTGTTGAGTTTAAAGAAGCCTTCTGTCTATTTGACAAGGATGGAGATGGTGAGTTTCCTACTATCATGTCCTCAATTCTTGGTTGCATTACCGTTGATGAATTGGCGACGGTGATTCGGTCTCTGGATCAGAATCCGACGGAGGAGGAGCTTCAGGATATGATAAGTGAAGTAGACGTTGATGGAAATGGGACCATAGAATTTGCAGAGTTCTTGAGCTTAATGGCAAACAAAATGAAGGAAACTGATGCAGAGGAGGAGCTCAAAGAGGCCTTCAAAGTGTTTGACAAGGATCAGAATGGATATATATCAGCTACTGAGTTGAGGCATGTAATGATCAATCTAGGCGAAAAATTGACCGACGAAGAGGTCGAGCAGATGATCAAGGAGGCTGATTTGGATGGTGATGGCCAAGTTAACTATGATGAATTTGTTAAGATGATGATGACCATTGGATGA

Protein Analysis

162

Amino Acids

18.16

Weight (kDa)

4.05

Isoelectric Point (pI)

42.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012718)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 395
AccI GTMKAC 1 cut(s) 201
AclWI GGATC 2 cut(s) 162, 327
AcoI YGGCCR 1 cut(s) 436
AcsI RAATTY 2 cut(s) 227, 455
AcuI CTGAAG 1 cut(s) 164
AgsI TTSAA 1 cut(s) 304
AluBI AGCT 4 cut(s) 178, 246, 289, 341
AluI AGCT 4 cut(s) 178, 246, 289, 341
Alw21I GWGCWC 1 cut(s) 291
Alw26I GTCTC 1 cut(s) 153
AlwI GGATC 2 cut(s) 162, 327
AlwNI CAGNNNCTG 1 cut(s) 344
AoxI GGCC 2 cut(s) 297, 436
ApoI RAATTY 2 cut(s) 227, 455
AspS9I GGNCC 1 cut(s) 219
AsuHPI GGTGA 3 cut(s) 89, 151, 443
AvaII GGWCC 1 cut(s) 219
BalI TGGCCA 1 cut(s) 438
BanII GRGCYC 1 cut(s) 291
Bbv12I GWGCWC 1 cut(s) 291
BccI CCATC 5 cut(s) 62, 68, 203, 422, 428
BclI TGATCA 2 cut(s) 363, 408
BcoDI GTCTC 1 cut(s) 153
BfaI CTAG 1 cut(s) 371
Bme18I GGWCC 1 cut(s) 219
BmgT120I GGNCC 1 cut(s) 219
BmiI GGNNCC 1 cut(s) 220
BmsI GCATC 1 cut(s) 265
BpuEI CTTGAG 1 cut(s) 262
BsaBI GATNNNNATC 2 cut(s) 159, 334
BsaI GGTCTC 1 cut(s) 153
Bse8I GATNNNNATC 2 cut(s) 159, 334
BseGI GGATG 2 cut(s) 73, 433
BseJI GATNNNNATC 2 cut(s) 159, 334
BseMII CTCAG 2 cut(s) 5, 336
BseRI GAGGAG 4 cut(s) 185, 188, 296, 299
BshFI GGCC 2 cut(s) 299, 438
BsiHKAI GWGCWC 1 cut(s) 291
BslFI GGGAC 1 cut(s) 232
BsmAI GTCTC 1 cut(s) 153
BsmFI GGGAC 1 cut(s) 232
BsnI GGCC 2 cut(s) 299, 438
Bso31I GGTCTC 1 cut(s) 153
Bsp1286I GDGCHC 1 cut(s) 291
Bsp143I GATC 4 cut(s) 154, 319, 363, 408
BspANI GGCC 2 cut(s) 299, 438
BspCNI CTCAG 2 cut(s) 6, 337
BspLI GGNNCC 1 cut(s) 220
BspPI GGATC 2 cut(s) 162, 327
BspTNI GGTCTC 1 cut(s) 153
BssMI GATC 4 cut(s) 154, 319, 363, 408
Bst4CI ACNGT 2 cut(s) 121, 139
Bst6I CTCTTC 1 cut(s) 387
BstDEI CTNAG 2 cut(s) 14, 345
BstF5I GGATG 2 cut(s) 73, 433
BstKTI GATC 4 cut(s) 157, 322, 366, 411
BstMAI GTCTC 1 cut(s) 153
BstMBI GATC 4 cut(s) 154, 319, 363, 408
BstNSI RCATGY 1 cut(s) 359
BsuRI GGCC 2 cut(s) 299, 438
BtsCI GGATG 2 cut(s) 73, 433
CaiI CAGNNNCTG 1 cut(s) 344
Cfr13I GGNCC 1 cut(s) 219
CviAII CATG 2 cut(s) 94, 356
CviJI RGCY 8 cut(s) 47, 178, 246, 289, 299, 341, 419, 438
CviKI_1 RGCY 8 cut(s) 47, 178, 246, 289, 299, 341, 419, 438
DdeI CTNAG 2 cut(s) 14, 345
DpnI GATC 4 cut(s) 156, 321, 365, 410
DpnII GATC 4 cut(s) 154, 319, 363, 408
DraI TTTAAA 1 cut(s) 40
DrdI GACNNNNNNGTC 1 cut(s) 395
DseDI GACNNNNNNGTC 1 cut(s) 395
EaeI YGGCCR 1 cut(s) 436
Eam1104I CTCTTC 1 cut(s) 387
EarI CTCTTC 1 cut(s) 387
Ecl136II GAGCTC 1 cut(s) 289
Eco147I AGGCCT 1 cut(s) 299
Eco24I GRGCYC 1 cut(s) 291
Eco31I GGTCTC 1 cut(s) 153
Eco47I GGWCC 1 cut(s) 219
Eco53kI GAGCTC 1 cut(s) 289
Eco57I CTGAAG 1 cut(s) 164
EcoICRI GAGCTC 1 cut(s) 289
EcoT38I GRGCYC 1 cut(s) 291
FaeI CATG 2 cut(s) 97, 359
FaiI YATR 7 cut(s) 95, 188, 224, 333, 335, 357, 450
FaqI GGGAC 1 cut(s) 232
FatI CATG 2 cut(s) 93, 355
FbaI TGATCA 2 cut(s) 363, 408
FblI GTMKAC 1 cut(s) 201
FokI GGATG 2 cut(s) 80, 440
FriOI GRGCYC 1 cut(s) 291
FspBI CTAG 1 cut(s) 371
HaeIII GGCC 2 cut(s) 299, 438
Hin1II CATG 2 cut(s) 97, 359
HincII GTYRAC 1 cut(s) 445
HindII GTYRAC 1 cut(s) 445
HinfI GANTC 2 cut(s) 142, 160
HpaI GTTAAC 1 cut(s) 445
HphI GGTGA 3 cut(s) 89, 151, 443
Hpy166II GTNNAC 2 cut(s) 202, 445
Hpy188I TCNGA 4 cut(s) 15, 159, 165, 324
Hpy188III TCNNGA 3 cut(s) 152, 182, 241
Hpy8I GTNNAC 2 cut(s) 202, 445
Hpy99I CGWCG 3 cut(s) 139, 169, 392
HpyAV CCTTC 3 cut(s) 58, 259, 310
HpyCH4III ACNGT 2 cut(s) 121, 139
HpyCH4IV ACGT 1 cut(s) 204
HpyCH4V TGCA 3 cut(s) 114, 233, 278
HpyF3I CTNAG 2 cut(s) 14, 345
HpySE526I ACGT 1 cut(s) 204
Hsp92II CATG 2 cut(s) 97, 359
Ksp22I TGATCA 2 cut(s) 363, 408
KspAI GTTAAC 1 cut(s) 445
Kzo9I GATC 4 cut(s) 154, 319, 363, 408
LmnI GCTCC 2 cut(s) 175, 286
LpnPI CCDG 2 cut(s) 137, 167
LweI GCATC 1 cut(s) 265
MaeI CTAG 1 cut(s) 371
MaeII ACGT 1 cut(s) 204
MalI GATC 4 cut(s) 156, 321, 365, 410
MboI GATC 4 cut(s) 154, 319, 363, 408
MboII GAAGA 2 cut(s) 32, 404
MhlI GDGCHC 1 cut(s) 291
MlsI TGGCCA 1 cut(s) 438
MluCI AATT 5 cut(s) 102, 128, 227, 380, 455
MluNI TGGCCA 1 cut(s) 438
MmeI TCCRAC 1 cut(s) 188
MnlI CCTC 9 cut(s) 109, 163, 166, 274, 277, 289, 345, 388, 409
Mox20I TGGCCA 1 cut(s) 438
MscI TGGCCA 1 cut(s) 438
MseI TTAA 4 cut(s) 39, 248, 444, 462
Msp20I TGGCCA 1 cut(s) 438
NdeII GATC 4 cut(s) 154, 319, 363, 408
NlaIII CATG 2 cut(s) 97, 359
NlaIV GGNNCC 1 cut(s) 220
NspI RCATGY 1 cut(s) 359
PceI AGGCCT 1 cut(s) 299
PcsI WCGNNNNNNNCGW 1 cut(s) 396
PfeI GAWTC 2 cut(s) 142, 160
Psp124BI GAGCTC 1 cut(s) 291
PspN4I GGNNCC 1 cut(s) 220
PspPI GGNCC 1 cut(s) 219
PstNI CAGNNNCTG 1 cut(s) 344
SacI GAGCTC 1 cut(s) 291
SaqAI TTAA 4 cut(s) 39, 248, 444, 462
Sau3AI GATC 4 cut(s) 154, 319, 363, 408
Sau96I GGNCC 1 cut(s) 219
SduI GDGCHC 1 cut(s) 291
SetI ASST 6 cut(s) 180, 207, 248, 291, 343, 399
SfaNI GCATC 1 cut(s) 265
SinI GGWCC 1 cut(s) 219
SmlI CTYRAG 1 cut(s) 241
SmoI CTYRAG 1 cut(s) 241
Sse9I AATT 5 cut(s) 102, 128, 227, 380, 455
SseBI AGGCCT 1 cut(s) 299
SspMI CTAG 1 cut(s) 371
SstI GAGCTC 1 cut(s) 291
StuI AGGCCT 1 cut(s) 299
TaaI ACNGT 2 cut(s) 121, 139
TaiI ACGT 1 cut(s) 207
TaqI TCGA 1 cut(s) 399
TaqII GACCGA 2 cut(s) 135, 401
TasI AATT 5 cut(s) 102, 128, 227, 380, 455
TfiI GAWTC 2 cut(s) 142, 160
Tru1I TTAA 4 cut(s) 39, 248, 444, 462
Tru9I TTAA 4 cut(s) 39, 248, 444, 462
TspDTI ATGAA 3 cut(s) 141, 278, 468
TspGWI ACGGA 1 cut(s) 182
VpaK11BI GGWCC 1 cut(s) 219
XapI RAATTY 2 cut(s) 227, 455
XceI RCATGY 1 cut(s) 359
XmiI GTMKAC 1 cut(s) 201
XspI CTAG 1 cut(s) 371
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.