pycom13g17520

Calmodulin-like protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
13335844 .. 13338007
2164 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g17520.2

Sequence Viewer

Length: 453 bp
ATGGCAGACGTACTAAGCGAAGAACAGATTGTTGAGTTTAAAGAAGCATTTTGTCTATTTGACAAGGATGGAGATGGTTGCATTACTGTGGATGAACTGGCGACGGTGATTCGGTCTCTGGATCAGAATCCGACGGAGGAGGAGCTTCAGGACATGATAAGCGAAGTGGACGTTGATGGAAATGGGACCATTGAGTTCGCAGAGTTCTTGAGCTTAATGGCAAACAGAATGAAGGAAACTGATGCAGAGGAGGAGCTCAAAGAGGCCTTCAAAGTATTTGACAAGGATCAGAATGGATACATTTCAGCTACTGAGTTGAGGCATGTAATGATCAATCTAGGCGAAAAATTGACCGACGAAGAGGTCGAGCAGATGATAAATGAGGCGGATTTGGACGGTGACGGACAAGTGAATTACGATGAATTCGTGAAGATGATGATGACCATTGGATGA

Protein Analysis

151

Amino Acids

16.99

Weight (kDa)

4.05

Isoelectric Point (pI)

35.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012718)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 362
AciI CCGC 1 cut(s) 386
AclWI GGATC 2 cut(s) 129, 294
AcsI RAATTY 1 cut(s) 422
AcuI CTGAAG 1 cut(s) 131
AfaI GTAC 1 cut(s) 12
AgsI TTSAA 1 cut(s) 271
AluBI AGCT 4 cut(s) 145, 213, 256, 308
AluI AGCT 4 cut(s) 145, 213, 256, 308
Alw21I GWGCWC 1 cut(s) 258
Alw26I GTCTC 1 cut(s) 120
AlwI GGATC 2 cut(s) 129, 294
AlwNI CAGNNNCTG 1 cut(s) 311
AoxI GGCC 1 cut(s) 264
ApoI RAATTY 1 cut(s) 422
AspS9I GGNCC 1 cut(s) 186
AsuHPI GGTGA 2 cut(s) 118, 410
AvaII GGWCC 1 cut(s) 186
BanII GRGCYC 1 cut(s) 258
Bbv12I GWGCWC 1 cut(s) 258
BccI CCATC 3 cut(s) 62, 68, 170
BciVI GTATCC 1 cut(s) 290
BclI TGATCA 1 cut(s) 330
BcoDI GTCTC 1 cut(s) 120
BfaI CTAG 1 cut(s) 338
BfuI GTATCC 1 cut(s) 290
Bme18I GGWCC 1 cut(s) 186
BmgT120I GGNCC 1 cut(s) 186
BmiI GGNNCC 1 cut(s) 187
BmsI GCATC 1 cut(s) 232
BpuEI CTTGAG 1 cut(s) 229
BsaBI GATNNNNATC 1 cut(s) 126
BsaI GGTCTC 1 cut(s) 120
Bse1I ACTGG 1 cut(s) 102
Bse8I GATNNNNATC 1 cut(s) 126
BseGI GGATG 2 cut(s) 73, 97
BseJI GATNNNNATC 1 cut(s) 126
BseMII CTCAG 1 cut(s) 303
BseNI ACTGG 1 cut(s) 102
BseRI GAGGAG 4 cut(s) 152, 155, 263, 266
BshFI GGCC 1 cut(s) 266
BsiHKAI GWGCWC 1 cut(s) 258
BslFI GGGAC 1 cut(s) 199
BsmAI GTCTC 1 cut(s) 120
BsmFI GGGAC 1 cut(s) 199
BsnI GGCC 1 cut(s) 266
Bso31I GGTCTC 1 cut(s) 120
Bsp1286I GDGCHC 1 cut(s) 258
Bsp143I GATC 3 cut(s) 121, 286, 330
BspACI CCGC 1 cut(s) 386
BspANI GGCC 1 cut(s) 266
BspCNI CTCAG 1 cut(s) 304
BspLI GGNNCC 1 cut(s) 187
BspPI GGATC 2 cut(s) 129, 294
BspTNI GGTCTC 1 cut(s) 120
BsrI ACTGG 1 cut(s) 102
BssMI GATC 3 cut(s) 121, 286, 330
Bst4CI ACNGT 3 cut(s) 88, 106, 398
Bst6I CTCTTC 1 cut(s) 354
BstDEI CTNAG 2 cut(s) 14, 312
BstF5I GGATG 2 cut(s) 73, 97
BstKTI GATC 3 cut(s) 124, 289, 333
BstMAI GTCTC 1 cut(s) 120
BstMBI GATC 3 cut(s) 121, 286, 330
BstNSI RCATGY 1 cut(s) 326
BsuI GTATCC 1 cut(s) 290
BsuRI GGCC 1 cut(s) 266
BtsCI GGATG 2 cut(s) 73, 97
CaiI CAGNNNCTG 1 cut(s) 311
Cfr13I GGNCC 1 cut(s) 186
Csp6I GTAC 1 cut(s) 11
CviAII CATG 2 cut(s) 154, 323
CviJI RGCY 5 cut(s) 145, 213, 256, 266, 308
CviKI_1 RGCY 5 cut(s) 145, 213, 256, 266, 308
CviQI GTAC 1 cut(s) 11
DdeI CTNAG 2 cut(s) 14, 312
DpnI GATC 3 cut(s) 123, 288, 332
DpnII GATC 3 cut(s) 121, 286, 330
DraI TTTAAA 1 cut(s) 40
DrdI GACNNNNNNGTC 1 cut(s) 362
DseDI GACNNNNNNGTC 1 cut(s) 362
Eam1104I CTCTTC 1 cut(s) 354
EarI CTCTTC 1 cut(s) 354
EciI GGCGGA 1 cut(s) 401
Ecl136II GAGCTC 1 cut(s) 256
Eco147I AGGCCT 1 cut(s) 266
Eco24I GRGCYC 1 cut(s) 258
Eco31I GGTCTC 1 cut(s) 120
Eco47I GGWCC 1 cut(s) 186
Eco53kI GAGCTC 1 cut(s) 256
Eco57I CTGAAG 1 cut(s) 131
EcoICRI GAGCTC 1 cut(s) 256
EcoRI GAATTC 1 cut(s) 422
EcoT38I GRGCYC 1 cut(s) 258
FaeI CATG 2 cut(s) 157, 326
FaiI YATR 2 cut(s) 155, 324
FaqI GGGAC 1 cut(s) 199
FatI CATG 2 cut(s) 153, 322
FbaI TGATCA 1 cut(s) 330
FokI GGATG 2 cut(s) 80, 104
FriOI GRGCYC 1 cut(s) 258
FspBI CTAG 1 cut(s) 338
HaeIII GGCC 1 cut(s) 266
Hin1II CATG 2 cut(s) 157, 326
HinfI GANTC 2 cut(s) 109, 127
HphI GGTGA 2 cut(s) 118, 410
Hpy166II GTNNAC 1 cut(s) 169
Hpy188I TCNGA 3 cut(s) 126, 132, 291
Hpy188III TCNNGA 4 cut(s) 119, 149, 208, 427
Hpy8I GTNNAC 1 cut(s) 169
Hpy99I CGWCG 3 cut(s) 106, 136, 359
HpyAV CCTTC 2 cut(s) 226, 277
HpyCH4III ACNGT 3 cut(s) 88, 106, 398
HpyCH4IV ACGT 2 cut(s) 9, 171
HpyCH4V TGCA 2 cut(s) 81, 245
HpyF3I CTNAG 2 cut(s) 14, 312
HpySE526I ACGT 2 cut(s) 9, 171
Hsp92II CATG 2 cut(s) 157, 326
Ksp22I TGATCA 1 cut(s) 330
Kzo9I GATC 3 cut(s) 121, 286, 330
LmnI GCTCC 2 cut(s) 142, 253
LpnPI CCDG 3 cut(s) 83, 104, 134
LweI GCATC 1 cut(s) 232
MaeI CTAG 1 cut(s) 338
MaeII ACGT 2 cut(s) 9, 171
MaeIII GTNAC 1 cut(s) 398
MalI GATC 3 cut(s) 123, 288, 332
MboI GATC 3 cut(s) 121, 286, 330
MboII GAAGA 3 cut(s) 32, 371, 442
MhlI GDGCHC 1 cut(s) 258
MluCI AATT 3 cut(s) 347, 412, 422
MmeI TCCRAC 1 cut(s) 155
MnlI CCTC 8 cut(s) 130, 133, 241, 244, 256, 312, 355, 376
MseI TTAA 2 cut(s) 39, 215
MslI CAYNNNNRTG 1 cut(s) 86
NdeII GATC 3 cut(s) 121, 286, 330
NlaIII CATG 2 cut(s) 157, 326
NlaIV GGNNCC 1 cut(s) 187
NmuCI GTSAC 1 cut(s) 398
NspI RCATGY 1 cut(s) 326
PceI AGGCCT 1 cut(s) 266
PcsI WCGNNNNNNNCGW 3 cut(s) 15, 363, 423
PfeI GAWTC 2 cut(s) 109, 127
Psp124BI GAGCTC 1 cut(s) 258
PspN4I GGNNCC 1 cut(s) 187
PspPI GGNCC 1 cut(s) 186
PstNI CAGNNNCTG 1 cut(s) 311
RsaI GTAC 1 cut(s) 12
RsaNI GTAC 1 cut(s) 11
RseI CAYNNNNRTG 1 cut(s) 86
SacI GAGCTC 1 cut(s) 258
SaqAI TTAA 2 cut(s) 39, 215
Sau3AI GATC 3 cut(s) 121, 286, 330
Sau96I GGNCC 1 cut(s) 186
SduI GDGCHC 1 cut(s) 258
SetI ASST 7 cut(s) 12, 147, 174, 215, 258, 310, 366
SfaNI GCATC 1 cut(s) 232
SinI GGWCC 1 cut(s) 186
SmiMI CAYNNNNRTG 1 cut(s) 86
SmlI CTYRAG 1 cut(s) 208
SmoI CTYRAG 1 cut(s) 208
Sse9I AATT 3 cut(s) 347, 412, 422
SseBI AGGCCT 1 cut(s) 266
SsiI CCGC 1 cut(s) 386
SspMI CTAG 1 cut(s) 338
SstI GAGCTC 1 cut(s) 258
StuI AGGCCT 1 cut(s) 266
TaaI ACNGT 3 cut(s) 88, 106, 398
TaiI ACGT 2 cut(s) 12, 174
TaqI TCGA 1 cut(s) 366
TaqII GACCGA 2 cut(s) 102, 368
TasI AATT 3 cut(s) 347, 412, 422
TfiI GAWTC 2 cut(s) 109, 127
Tru1I TTAA 2 cut(s) 39, 215
Tru9I TTAA 2 cut(s) 39, 215
TseFI GTSAC 1 cut(s) 398
Tsp45I GTSAC 1 cut(s) 398
TspDTI ATGAA 3 cut(s) 108, 245, 435
TspGWI ACGGA 2 cut(s) 149, 417
VpaK11BI GGWCC 1 cut(s) 186
XapI RAATTY 1 cut(s) 422
XceI RCATGY 1 cut(s) 326
XspI CTAG 1 cut(s) 338
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.