Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0014429

Physical Location & Seq

Genomic Coordinates Forward (+)

4940637 .. 4944248

Gene Structure 3612 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G069500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 822 bp

ATGGCTTCACCTCCGAATGGTTTGGCACACCTCTCTCTTGATGATGGGGATGAAGCAGCTAGAGAGCACCTACTGACTGTGGACATTGGAGAAGCCGATGGGGACGTGAAATTCCGGATACGAAATCTGACCAAGAAATCAGAGACCACTGGATGCGCCATACTCAATGGGTTGAGCTTGGACATACCAAAAGGCGTGATCGTTGGGGTCATCGGCCCCAGTGGCAGCGGCAAATCGACGCTGCTCAGAGCTCTCAACCGCCTCTGGGAGCCTCCATCTGGGACTGTCTTCTTGGACGGTCATGATCTTCGGGACCTGGATGTTCTCAGCCTCCGGCGCAAGGTCGGCATGCTCTTCCAGCTTCCTGCTCTTTTTGAAGGCACAGTTGCAGACAATATACGTTATGGTCCTCAATTGAGGGGGAAGAAGCTGAGTGACCAGAACGTCCACAAGTTGCTGACCCTTGTAGACCTTGATTCATCTTTTTTCAGCAAGACTGGTTCTGAAATGTCTGTAGGTCAAGCCCAAAGAGTTGCACTTGCTAGGACCCTAGCCAATTCGCCTGAGGTTTTGCTGCTGGACGAACCTACCAGTGCCTTGGATCCAATATCAACAGAGCACATAGAAGGTGCTTTGGAGAAGCTGAAGAAGAAACAGGGCATGACAATTATAATGGTCTCACACAGCATCAAACAAATCCAGAGGATTGCTGATATAGTGTGCCTCCTTGTGGATGGGGAGATTGTTGAAGTTTTAAAACCAGATCAACTCTCACAAGCCCAGCATCCTATGGCACTAAGATTTCTTGAACTCAGCTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005338 GO:0005460 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0008509 GO:0008514 GO:0010035 GO:0010038 GO:0010044 GO:0012506 GO:0015075 GO:0015165 GO:0015711 GO:0015780 GO:0015786 GO:0015931 GO:0015932 GO:0016020 GO:0022857 GO:0031090 GO:0031982 GO:0034220 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0090481 GO:0098588 GO:0098656 GO:0098805 GO:1901264 GO:1901505

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_tran

Protein Analysis

274

Amino Acids

29.6

Weight (kDa)

5.82

Isoelectric Point (pI)

30.33

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014429)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67940
fragaria_vesca	FvH4_4g06671 FvH4_4g06671
malus_domestica	MD13G1237100.v1.1 MD16G1242500.v1.1
prunus_persica	Prupe.1G069500_v2.0.a1
pyrus_communis	pycom16g20320 pycom16g20330
rosa_chinensis	RchiOBHm_Chr4g0398581
rosa_laevigata	RLG00000009342
rosa_roxburghii	Rroxscaffold_5G00343550
rosa_rugosa	Rorug04G0009500 Rorug04G0009600.1
rosa_samantha	Rh4AG087500 Rh4BG084100 Rh4CG095700 Rh4DG079000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	671
AasI	GACNNNNNNGTC	1 cut(s)	443
AccI	GTMKAC	1 cut(s)	468
AccIII	TCCGGA	1 cut(s)	114
AciI	CCGC	2 cut(s)	228, 259
AclWI	GGATC	2 cut(s)	596, 609
AcsI	RAATTY	1 cut(s)	110
AcuI	CTGAAG	1 cut(s)	665
AfiI	CCNNNNNNNGG	5 cut(s)	17, 265, 278, 340, 730
AgsI	TTSAA	3 cut(s)	377, 749, 809
AjiI	CACGTC	1 cut(s)	106
AjnI	CCWGG	1 cut(s)	315
AluBI	AGCT	7 cut(s)	59, 177, 251, 361, 430, 643, 816
AluI	AGCT	7 cut(s)	59, 177, 251, 361, 430, 643, 816
Alw21I	GWGCWC	3 cut(s)	69, 253, 621
Alw26I	GTCTC	2 cut(s)	137, 682
AlwI	GGATC	2 cut(s)	596, 609
Aor13HI	TCCGGA	1 cut(s)	114
AoxI	GGCC	1 cut(s)	214
ApeKI	GCWGC	4 cut(s)	56, 225, 241, 574
ApoI	RAATTY	1 cut(s)	110
AspLEI	GCGC	2 cut(s)	158, 339
AspS9I	GGNCC	4 cut(s)	215, 313, 407, 546
AvaII	GGWCC	3 cut(s)	313, 407, 546
AxyI	CCTNAGG	1 cut(s)	564
BamHI	GGATCC	1 cut(s)	601
BanII	GRGCYC	1 cut(s)	253
BbsI	GAAGAC	1 cut(s)	280
Bbv12I	GWGCWC	3 cut(s)	69, 253, 621
BbvI	GCAGC	4 cut(s)	68, 228, 237, 561
BccI	CCATC	4 cut(s)	38, 92, 283, 728
BciT130I	CCWGG	1 cut(s)	317
BciVI	GTATCC	1 cut(s)	111
BcoDI	GTCTC	2 cut(s)	137, 682
BfaI	CTAG	3 cut(s)	60, 543, 551
BfmI	CTRYAG	1 cut(s)	513
BfuI	GTATCC	1 cut(s)	111
BglI	GCCNNNNNGGC	1 cut(s)	222
BisI	GCNGC	5 cut(s)	57, 226, 229, 242, 575
BlsI	GCNGC	5 cut(s)	58, 227, 230, 243, 576
Bme1390I	CCNGG	1 cut(s)	317
Bme18I	GGWCC	3 cut(s)	313, 407, 546
BmgBI	CACGTC	1 cut(s)	106
BmgT120I	GGNCC	4 cut(s)	215, 313, 407, 546
BmiI	GGNNCC	5 cut(s)	217, 270, 314, 548, 603
BmrFI	CCNGG	1 cut(s)	317
BmrI	ACTGGG	1 cut(s)	213
BmsI	GCATC	3 cut(s)	143, 696, 793
BmuI	ACTGGG	1 cut(s)	213
BpiI	GAAGAC	1 cut(s)	280
BsaI	GGTCTC	2 cut(s)	137, 682
BsaJI	CCNNGG	1 cut(s)	597
BsaWI	WCCGGW	1 cut(s)	114
Bsc4I	CCNNNNNNNGG	5 cut(s)	17, 265, 278, 340, 730
Bse1I	ACTGG	4 cut(s)	154, 219, 502, 591
Bse21I	CCTNAGG	1 cut(s)	564
BseAI	TCCGGA	1 cut(s)	114
BseBI	CCWGG	1 cut(s)	317
BseDI	CCNNGG	1 cut(s)	597
BseGI	GGATG	5 cut(s)	55, 158, 325, 739, 784
BseLI	CCNNNNNNNGG	5 cut(s)	17, 265, 278, 340, 730
BseMII	CTCAG	4 cut(s)	259, 340, 422, 555
BseNI	ACTGG	4 cut(s)	154, 219, 502, 591
BseXI	GCAGC	4 cut(s)	68, 228, 237, 561
BseYI	CCCAGC	1 cut(s)	780
BshFI	GGCC	1 cut(s)	216
BsiHKAI	GWGCWC	3 cut(s)	69, 253, 621
BsiSI	CCGG	2 cut(s)	115, 334
BslFI	GGGAC	3 cut(s)	116, 295, 326
BslI	CCNNNNNNNGG	5 cut(s)	17, 265, 278, 340, 730
BsmAI	GTCTC	2 cut(s)	137, 682
BsmFI	GGGAC	3 cut(s)	116, 295, 326
BsnI	GGCC	1 cut(s)	216
Bso31I	GGTCTC	2 cut(s)	137, 682
Bsp1286I	GDGCHC	3 cut(s)	69, 253, 621
Bsp13I	TCCGGA	1 cut(s)	114
Bsp143I	GATC	4 cut(s)	198, 304, 601, 763
BspACI	CCGC	2 cut(s)	228, 259
BspANI	GGCC	1 cut(s)	216
BspCNI	CTCAG	4 cut(s)	258, 339, 423, 556
BspEI	TCCGGA	1 cut(s)	114
BspHI	TCATGA	1 cut(s)	301
BspLI	GGNNCC	5 cut(s)	217, 270, 314, 548, 603
BspPI	GGATC	2 cut(s)	596, 609
BspQI	GCTCTTC	1 cut(s)	359
BspTNI	GGTCTC	2 cut(s)	137, 682
BsrI	ACTGG	4 cut(s)	154, 219, 502, 591
BssECI	CCNNGG	1 cut(s)	597
BssMI	GATC	4 cut(s)	198, 304, 601, 763
BssT1I	CCWWGG	1 cut(s)	597
Bst2UI	CCWGG	1 cut(s)	317
Bst4CI	ACNGT	4 cut(s)	79, 286, 299, 385
Bst6I	CTCTTC	1 cut(s)	359
BstC8I	GCNNGC	1 cut(s)	350
BstDEI	CTNAG	6 cut(s)	245, 326, 431, 564, 797, 812
BstF5I	GGATG	5 cut(s)	55, 158, 325, 739, 784
BstHHI	GCGC	2 cut(s)	158, 339
BstKTI	GATC	4 cut(s)	201, 307, 604, 766
BstMAI	GTCTC	2 cut(s)	137, 682
BstMBI	GATC	4 cut(s)	198, 304, 601, 763
BstMWI	GCNNNNNNNGC	4 cut(s)	222, 336, 345, 358
BstNI	CCWGG	1 cut(s)	317
BstNSI	RCATGY	1 cut(s)	352
BstSCI	CCNGG	1 cut(s)	315
BstSFI	CTRYAG	1 cut(s)	513
BstV1I	GCAGC	4 cut(s)	68, 228, 237, 561
BstV2I	GAAGAC	1 cut(s)	280
BstX2I	RGATCY	1 cut(s)	601
BstXI	CCANNNNNNTGG	1 cut(s)	598
BstYI	RGATCY	1 cut(s)	601
Bsu36I	CCTNAGG	1 cut(s)	564
BsuI	GTATCC	1 cut(s)	111
BsuRI	GGCC	1 cut(s)	216
BtrI	CACGTC	1 cut(s)	106
BtsCI	GGATG	5 cut(s)	55, 158, 325, 739, 784
BtsIMutI	CAGTG	3 cut(s)	147, 226, 598
Cac8I	GCNNGC	1 cut(s)	350
CciI	TCATGA	1 cut(s)	301
CfoI	GCGC	2 cut(s)	158, 339
Cfr13I	GGNCC	4 cut(s)	215, 313, 407, 546
CseI	GACGC	1 cut(s)	247
CviAII	CATG	3 cut(s)	302, 349, 661
DdeI	CTNAG	6 cut(s)	245, 326, 431, 564, 797, 812
DpnI	GATC	4 cut(s)	200, 306, 603, 765
DpnII	GATC	4 cut(s)	198, 304, 601, 763
DraI	TTTAAA	1 cut(s)	756
DrdI	GACNNNNNNGTC	1 cut(s)	443
DseDI	GACNNNNNNGTC	1 cut(s)	443
Eam1104I	CTCTTC	1 cut(s)	359
EarI	CTCTTC	1 cut(s)	359
Ecl136II	GAGCTC	1 cut(s)	251
Eco130I	CCWWGG	1 cut(s)	597
Eco24I	GRGCYC	1 cut(s)	253
Eco31I	GGTCTC	2 cut(s)	137, 682
Eco47I	GGWCC	3 cut(s)	313, 407, 546
Eco53kI	GAGCTC	1 cut(s)	251
Eco57I	CTGAAG	1 cut(s)	665
Eco81I	CCTNAGG	1 cut(s)	564
EcoICRI	GAGCTC	1 cut(s)	251
EcoO109I	RGGNCCY	2 cut(s)	313, 546
EcoRII	CCWGG	1 cut(s)	315
EcoT14I	CCWWGG	1 cut(s)	597
EcoT38I	GRGCYC	1 cut(s)	253
ErhI	CCWWGG	1 cut(s)	597
FaeI	CATG	3 cut(s)	305, 352, 664
FaqI	GGGAC	3 cut(s)	116, 295, 326
FatI	CATG	3 cut(s)	301, 348, 660
FblI	GTMKAC	1 cut(s)	468
Fnu4HI	GCNGC	5 cut(s)	57, 226, 229, 242, 575
FokI	GGATG	5 cut(s)	62, 165, 332, 746, 771
FriOI	GRGCYC	1 cut(s)	253
Fsp4HI	GCNGC	5 cut(s)	57, 226, 229, 242, 575
FspBI	CTAG	3 cut(s)	60, 543, 551
GlaI	GCGC	2 cut(s)	157, 338
GluI	GCNGC	5 cut(s)	57, 226, 229, 242, 575
GsaI	CCCAGC	1 cut(s)	784
HaeIII	GGCC	1 cut(s)	216
HapII	CCGG	2 cut(s)	115, 334
HgaI	GACGC	1 cut(s)	247
HhaI	GCGC	2 cut(s)	158, 339
Hin1II	CATG	3 cut(s)	305, 352, 664
Hin6I	GCGC	2 cut(s)	156, 337
HinP1I	GCGC	2 cut(s)	156, 337
HinfI	GANTC	1 cut(s)	476
HpaII	CCGG	2 cut(s)	115, 334
Hpy166II	GTNNAC	3 cut(s)	82, 448, 469
Hpy188I	TCNGA	5 cut(s)	15, 129, 142, 248, 505
Hpy188III	TCNNGA	6 cut(s)	38, 115, 302, 311, 700, 806
Hpy8I	GTNNAC	3 cut(s)	82, 448, 469
Hpy99I	CGWCG	1 cut(s)	241
HpyAV	CCTTC	2 cut(s)	371, 620
HpyCH4III	ACNGT	4 cut(s)	79, 286, 299, 385
HpyCH4IV	ACGT	3 cut(s)	105, 400, 444
HpyCH4V	TGCA	2 cut(s)	389, 536
HpyF10VI	GCNNNNNNNGC	4 cut(s)	222, 336, 345, 358
HpyF3I	CTNAG	6 cut(s)	245, 326, 431, 564, 797, 812
HpySE526I	ACGT	3 cut(s)	105, 400, 444
Hsp92II	CATG	3 cut(s)	305, 352, 664
HspAI	GCGC	2 cut(s)	156, 337
Kpn2I	TCCGGA	1 cut(s)	114
Kzo9I	GATC	4 cut(s)	198, 304, 601, 763
LguI	GCTCTTC	1 cut(s)	359
LmnI	GCTCC	1 cut(s)	268
Lsp1109I	GCAGC	4 cut(s)	68, 228, 237, 561
LweI	GCATC	3 cut(s)	143, 696, 793
MaeI	CTAG	3 cut(s)	60, 543, 551
MaeII	ACGT	3 cut(s)	105, 400, 444
MaeIII	GTNAC	1 cut(s)	434
MalI	GATC	4 cut(s)	200, 306, 603, 765
MboI	GATC	4 cut(s)	198, 304, 601, 763
MboII	GAAGA	6 cut(s)	280, 299, 346, 436, 658, 661
MfeI	CAATTG	1 cut(s)	413
MflI	RGATCY	1 cut(s)	601
MhlI	GDGCHC	3 cut(s)	69, 253, 621
MluCI	AATT	4 cut(s)	110, 413, 556, 666
MroI	TCCGGA	1 cut(s)	114
MseI	TTAA	2 cut(s)	755, 820
MspA1I	CMGCKG	1 cut(s)	228
MspI	CCGG	2 cut(s)	115, 334
MspR9I	CCNGG	1 cut(s)	317
MunI	CAATTG	1 cut(s)	413
MvaI	CCWGG	1 cut(s)	317
MwoI	GCNNNNNNNGC	4 cut(s)	222, 336, 345, 358
NdeII	GATC	4 cut(s)	198, 304, 601, 763
NlaIII	CATG	3 cut(s)	305, 352, 664
NlaIV	GGNNCC	5 cut(s)	217, 270, 314, 548, 603
NmuCI	GTSAC	1 cut(s)	434
NspI	RCATGY	1 cut(s)	352
PaeI	GCATGC	1 cut(s)	352
PagI	TCATGA	1 cut(s)	301
PciSI	GCTCTTC	1 cut(s)	359
PfeI	GAWTC	1 cut(s)	476
PkrI	GCNGC	5 cut(s)	58, 227, 230, 243, 576
PpuMI	RGGWCCY	2 cut(s)	313, 546
PsiI	TTATAA	1 cut(s)	671
Psp124BI	GAGCTC	1 cut(s)	253
Psp5II	RGGWCCY	2 cut(s)	313, 546
Psp6I	CCWGG	1 cut(s)	315
PspFI	CCCAGC	1 cut(s)	780
PspGI	CCWGG	1 cut(s)	315
PspN4I	GGNNCC	5 cut(s)	217, 270, 314, 548, 603
PspPI	GGNCC	4 cut(s)	215, 313, 407, 546
PspPPI	RGGWCCY	2 cut(s)	313, 546
PsuI	RGATCY	1 cut(s)	601
SacI	GAGCTC	1 cut(s)	253
SapI	GCTCTTC	1 cut(s)	359
SaqAI	TTAA	2 cut(s)	755, 820
SatI	GCNGC	5 cut(s)	57, 226, 229, 242, 575
Sau3AI	GATC	4 cut(s)	198, 304, 601, 763
Sau96I	GGNCC	4 cut(s)	215, 313, 407, 546
ScrFI	CCNGG	1 cut(s)	317
SduI	GDGCHC	3 cut(s)	69, 253, 621
SfaNI	GCATC	3 cut(s)	143, 696, 793
SfcI	CTRYAG	1 cut(s)	513
SinI	GGWCC	3 cut(s)	313, 407, 546
SphI	GCATGC	1 cut(s)	352
Sse9I	AATT	4 cut(s)	110, 413, 556, 666
SsiI	CCGC	2 cut(s)	228, 259
SspMI	CTAG	3 cut(s)	60, 543, 551
SstI	GAGCTC	1 cut(s)	253
StyD4I	CCNGG	1 cut(s)	315
StyI	CCWWGG	1 cut(s)	597
TaaI	ACNGT	4 cut(s)	79, 286, 299, 385
TaiI	ACGT	3 cut(s)	108, 403, 447
TaqI	TCGA	1 cut(s)	236
TasI	AATT	4 cut(s)	110, 413, 556, 666
TauI	GCSGC	1 cut(s)	231
TfiI	GAWTC	1 cut(s)	476
Tru1I	TTAA	2 cut(s)	755, 820
Tru9I	TTAA	2 cut(s)	755, 820
TscAI	CASTG	3 cut(s)	154, 226, 598
TseFI	GTSAC	1 cut(s)	434
TseI	GCWGC	4 cut(s)	56, 225, 241, 574
Tsp45I	GTSAC	1 cut(s)	434
TspDTI	ATGAA	2 cut(s)	66, 468
TspRI	CASTG	3 cut(s)	154, 226, 598
VpaK11BI	GGWCC	3 cut(s)	313, 407, 546
XapI	RAATTY	1 cut(s)	110
XceI	RCATGY	1 cut(s)	352
XmiI	GTMKAC	1 cut(s)	468
XspI	CTAG	3 cut(s)	60, 543, 551

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.