PHD-finger
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G19260 AT2G19260 |
| fragaria_vesca | FvH4_5g27730 FvH4_5g27730 FvH4_5g27730 FvH4_5g27730 FvH4_5g27730 FvH4_5g27730 FvH4_5g27730 FvH4_5g27730 FvH4_5g27730 FvH4_5g27730 FvH4_5g27730 FvH4_5g27730 FvH4_5g27730 |
| malus_domestica | MD13G1241700.v1.1 MD16G1248600.v1.1 |
| prunus_persica | Prupe.1G075400_v2.0.a1 |
| pyrus_communis | pycom13g21360 pycom16g20830 |
| rosa_chinensis | RchiOBHm_Chr7g0219501 |
| rosa_laevigata | RLG00000002287 |
| rosa_multiflora | Rmu_sc0003047.1_g000014 |
| rosa_roxburghii | Rroxscaffold_3G00240010 |
| rosa_rugosa | Rorug07G0185600 Rorug07G0185700 Rorug07G0185700 |
| rosa_samantha | Rh7AG328300 Rh7BG318800 Rh7CG345700 Rh7DG324700 |
| rosa_wichuraiana | Rw7G027740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1214 |
| AccB1I | GGYRCC | 3 cut(s) | 91, 1214, 1931 |
| AccI | GTMKAC | 1 cut(s) | 1981 |
| AciI | CCGC | 1 cut(s) | 1550 |
| AclWI | GGATC | 4 cut(s) | 1137, 1805, 1818, 1863 |
| AcsI | RAATTY | 4 cut(s) | 367, 502, 1251, 1395 |
| AcuI | CTGAAG | 5 cut(s) | 366, 1074, 1224, 1886, 1895 |
| AfaI | GTAC | 4 cut(s) | 121, 1216, 1350, 1942 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1527 |
| AflIII | ACRYGT | 1 cut(s) | 1317 |
| AgsI | TTSAA | 8 cut(s) | 30, 35, 795, 1038, 1547, 1642, 1697, 1766 |
| AjnI | CCWGG | 2 cut(s) | 94, 1184 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 205, 237 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1180, 1212 |
| AluBI | AGCT | 7 cut(s) | 38, 144, 155, 229, 1233, 1648, 1677 |
| AluI | AGCT | 7 cut(s) | 38, 144, 155, 229, 1233, 1648, 1677 |
| Alw21I | GWGCWC | 3 cut(s) | 265, 676, 1079 |
| Alw26I | GTCTC | 6 cut(s) | 471, 495, 888, 1107, 1494, 1880 |
| Alw44I | GTGCAC | 2 cut(s) | 261, 672 |
| AlwI | GGATC | 4 cut(s) | 1137, 1805, 1818, 1863 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1271, 1846 |
| Ama87I | CYCGRG | 2 cut(s) | 459, 852 |
| AoxI | GGCC | 3 cut(s) | 1468, 1570, 1895 |
| ApaLI | GTGCAC | 2 cut(s) | 261, 672 |
| ApeKI | GCWGC | 5 cut(s) | 38, 141, 144, 800, 1326 |
| ApoI | RAATTY | 4 cut(s) | 367, 502, 1251, 1395 |
| AseI | ATTAAT | 1 cut(s) | 542 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 220 |
| Asp718I | GGTACC | 1 cut(s) | 1214 |
| AspLEI | GCGC | 2 cut(s) | 1749, 1837 |
| AspS9I | GGNCC | 2 cut(s) | 1571, 1896 |
| AsuC2I | CCSGG | 1 cut(s) | 1900 |
| AvaI | CYCGRG | 2 cut(s) | 459, 852 |
| AxyI | CCTNAGG | 1 cut(s) | 1839 |
| BaeGI | GKGCMC | 2 cut(s) | 265, 676 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1198, 1231 |
| BamHI | GGATCC | 1 cut(s) | 1810 |
| BanI | GGYRCC | 3 cut(s) | 91, 1214, 1931 |
| BanII | GRGCYC | 1 cut(s) | 1756 |
| BbsI | GAAGAC | 2 cut(s) | 1055, 1212 |
| Bbv12I | GWGCWC | 3 cut(s) | 265, 676, 1079 |
| BbvCI | CCTCAGC | 1 cut(s) | 1892 |
| BbvI | GCAGC | 5 cut(s) | 25, 131, 153, 787, 1313 |
| BccI | CCATC | 2 cut(s) | 1586, 1922 |
| BceAI | ACGGC | 2 cut(s) | 1495, 1931 |
| BciT130I | CCWGG | 2 cut(s) | 96, 1186 |
| BcnI | CCSGG | 1 cut(s) | 1900 |
| BcoDI | GTCTC | 6 cut(s) | 471, 495, 888, 1107, 1494, 1880 |
| BfaI | CTAG | 4 cut(s) | 24, 1086, 1416, 1668 |
| BfmI | CTRYAG | 2 cut(s) | 145, 1680 |
| BisI | GCNGC | 5 cut(s) | 39, 142, 145, 801, 1327 |
| BlsI | GCNGC | 5 cut(s) | 40, 143, 146, 802, 1328 |
| BmcAI | AGTACT | 1 cut(s) | 1942 |
| Bme1390I | CCNGG | 3 cut(s) | 96, 1186, 1900 |
| BmeT110I | CYCGRG | 2 cut(s) | 459, 852 |
| BmgT120I | GGNCC | 2 cut(s) | 1571, 1896 |
| BmiI | GGNNCC | 6 cut(s) | 93, 1216, 1755, 1812, 1898, 1933 |
| BmrFI | CCNGG | 3 cut(s) | 96, 1186, 1900 |
| BmrI | ACTGGG | 2 cut(s) | 1792, 1856 |
| BmsI | GCATC | 4 cut(s) | 646, 1146, 1466, 1960 |
| BmuI | ACTGGG | 2 cut(s) | 1792, 1856 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1233 |
| BpiI | GAAGAC | 2 cut(s) | 1055, 1212 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1064, 1096 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1892 |
| BpuMI | CCSGG | 1 cut(s) | 1900 |
| BsaI | GGTCTC | 1 cut(s) | 1107 |
| BsaJI | CCNNGG | 3 cut(s) | 61, 1156, 1898 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 626, 656 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1527 |
| Bse21I | CCTNAGG | 1 cut(s) | 1839 |
| Bse3DI | GCAATG | 1 cut(s) | 136 |
| BseBI | CCWGG | 2 cut(s) | 96, 1186 |
| BseDI | CCNNGG | 3 cut(s) | 61, 1156, 1898 |
| BseGI | GGATG | 4 cut(s) | 527, 920, 1177, 1933 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1527 |
| BseMI | GCAATG | 1 cut(s) | 136 |
| BseMII | CTCAG | 2 cut(s) | 1853, 1883 |
| BseRI | GAGGAG | 3 cut(s) | 459, 1069, 1746 |
| BseSI | GKGCMC | 2 cut(s) | 265, 676 |
| BseXI | GCAGC | 5 cut(s) | 25, 131, 153, 787, 1313 |
| BseYI | CCCAGC | 1 cut(s) | 225 |
| BsgI | GTGCAG | 1 cut(s) | 1284 |
| BshFI | GGCC | 3 cut(s) | 1470, 1572, 1897 |
| BshNI | GGYRCC | 3 cut(s) | 91, 1214, 1931 |
| BsiHKAI | GWGCWC | 3 cut(s) | 265, 676, 1079 |
| BsiHKCI | CYCGRG | 2 cut(s) | 459, 852 |
| BsiSI | CCGG | 1 cut(s) | 1900 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1527 |
| BsmAI | GTCTC | 6 cut(s) | 471, 495, 888, 1107, 1494, 1880 |
| BsmBI | CGTCTC | 2 cut(s) | 471, 1880 |
| BsmI | GAATGC | 1 cut(s) | 1459 |
| BsnI | GGCC | 3 cut(s) | 1470, 1572, 1897 |
| Bso31I | GGTCTC | 1 cut(s) | 1107 |
| BsoBI | CYCGRG | 2 cut(s) | 459, 852 |
| Bsp1286I | GDGCHC | 4 cut(s) | 265, 676, 1079, 1756 |
| Bsp1407I | TGTACA | 1 cut(s) | 119 |
| Bsp143I | GATC | 5 cut(s) | 325, 388, 1129, 1810, 1855 |
| Bsp19I | CCATGG | 2 cut(s) | 61, 1156 |
| BspACI | CCGC | 1 cut(s) | 1550 |
| BspANI | GGCC | 3 cut(s) | 1470, 1572, 1897 |
| BspCNI | CTCAG | 2 cut(s) | 1852, 1884 |
| BspLI | GGNNCC | 6 cut(s) | 93, 1216, 1755, 1812, 1898, 1933 |
| BspMAI | CTGCAG | 1 cut(s) | 149 |
| BspPI | GGATC | 4 cut(s) | 1137, 1805, 1818, 1863 |
| BspT107I | GGYRCC | 3 cut(s) | 91, 1214, 1931 |
| BspTNI | GGTCTC | 1 cut(s) | 1107 |
| BsrDI | GCAATG | 1 cut(s) | 136 |
| BsrGI | TGTACA | 1 cut(s) | 119 |
| BssECI | CCNNGG | 3 cut(s) | 61, 1156, 1898 |
| BssMI | GATC | 5 cut(s) | 325, 388, 1129, 1810, 1855 |
| BssNAI | GTATAC | 1 cut(s) | 1982 |
| BssT1I | CCWWGG | 2 cut(s) | 61, 1156 |
| Bst1107I | GTATAC | 1 cut(s) | 1982 |
| Bst2UI | CCWGG | 2 cut(s) | 96, 1186 |
| Bst4CI | ACNGT | 1 cut(s) | 1488 |
| Bst6I | CTCTTC | 2 cut(s) | 1087, 1299 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1271 |
| BstAUI | TGTACA | 1 cut(s) | 119 |
| BstC8I | GCNNGC | 1 cut(s) | 1032 |
| BstDEI | CTNAG | 4 cut(s) | 804, 1148, 1839, 1892 |
| BstDSI | CCRYGG | 2 cut(s) | 61, 1156 |
| BstF5I | GGATG | 4 cut(s) | 527, 920, 1177, 1933 |
| BstHHI | GCGC | 2 cut(s) | 1749, 1837 |
| BstKTI | GATC | 5 cut(s) | 328, 391, 1132, 1813, 1858 |
| BstMAI | GTCTC | 6 cut(s) | 471, 495, 888, 1107, 1494, 1880 |
| BstMBI | GATC | 5 cut(s) | 325, 388, 1129, 1810, 1855 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 439, 461, 832, 854, 1230, 1271 |
| BstNI | CCWGG | 2 cut(s) | 96, 1186 |
| BstNSI | RCATGY | 2 cut(s) | 1034, 1321 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1233 |
| BstSCI | CCNGG | 3 cut(s) | 94, 1184, 1898 |
| BstSFI | CTRYAG | 2 cut(s) | 145, 1680 |
| BstSLI | GKGCMC | 2 cut(s) | 265, 676 |
| BstV1I | GCAGC | 5 cut(s) | 25, 131, 153, 787, 1313 |
| BstV2I | GAAGAC | 2 cut(s) | 1055, 1212 |
| BstX2I | RGATCY | 2 cut(s) | 1129, 1810 |
| BstYI | RGATCY | 2 cut(s) | 1129, 1810 |
| BstZ17I | GTATAC | 1 cut(s) | 1982 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1839 |
| BsuRI | GGCC | 3 cut(s) | 1470, 1572, 1897 |
| BtgI | CCRYGG | 2 cut(s) | 61, 1156 |
| BtsCI | GGATG | 4 cut(s) | 527, 920, 1177, 1933 |
| BtsI | GCAGTG | 1 cut(s) | 1231 |
| BtsIMutI | CAGTG | 4 cut(s) | 1209, 1231, 1444, 1528 |
| Cac8I | GCNNGC | 1 cut(s) | 1032 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1271, 1846 |
| CfoI | GCGC | 2 cut(s) | 1749, 1837 |
| Cfr13I | GGNCC | 2 cut(s) | 1571, 1896 |
| CseI | GACGC | 3 cut(s) | 453, 846, 1897 |
| Csp6I | GTAC | 4 cut(s) | 120, 1215, 1349, 1941 |
| CviQI | GTAC | 4 cut(s) | 120, 1215, 1349, 1941 |
| DdeI | CTNAG | 4 cut(s) | 804, 1148, 1839, 1892 |
| DpnI | GATC | 5 cut(s) | 327, 390, 1131, 1812, 1857 |
| DpnII | GATC | 5 cut(s) | 325, 388, 1129, 1810, 1855 |
| DraI | TTTAAA | 2 cut(s) | 501, 1401 |
| Eam1104I | CTCTTC | 2 cut(s) | 1087, 1299 |
| EarI | CTCTTC | 2 cut(s) | 1087, 1299 |
| Eco130I | CCWWGG | 2 cut(s) | 61, 1156 |
| Eco24I | GRGCYC | 1 cut(s) | 1756 |
| Eco31I | GGTCTC | 1 cut(s) | 1107 |
| Eco57I | CTGAAG | 5 cut(s) | 366, 1074, 1224, 1886, 1895 |
| Eco81I | CCTNAGG | 1 cut(s) | 1839 |
| Eco88I | CYCGRG | 2 cut(s) | 459, 852 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1896 |
| EcoRII | CCWGG | 2 cut(s) | 94, 1184 |
| EcoT14I | CCWWGG | 2 cut(s) | 61, 1156 |
| EcoT22I | ATGCAT | 2 cut(s) | 1139, 1459 |
| EcoT38I | GRGCYC | 1 cut(s) | 1756 |
| ErhI | CCWWGG | 2 cut(s) | 61, 1156 |
| Esp3I | CGTCTC | 2 cut(s) | 471, 1880 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 205, 237 |
| FblI | GTMKAC | 1 cut(s) | 1981 |
| Fnu4HI | GCNGC | 5 cut(s) | 39, 142, 145, 801, 1327 |
| FokI | GGATG | 4 cut(s) | 534, 927, 1184, 1940 |
| FriOI | GRGCYC | 1 cut(s) | 1756 |
| Fsp4HI | GCNGC | 5 cut(s) | 39, 142, 145, 801, 1327 |
| FspBI | CTAG | 4 cut(s) | 24, 1086, 1416, 1668 |
| GlaI | GCGC | 2 cut(s) | 1748, 1836 |
| GluI | GCNGC | 5 cut(s) | 39, 142, 145, 801, 1327 |
| GsaI | CCCAGC | 1 cut(s) | 229 |
| HaeIII | GGCC | 3 cut(s) | 1470, 1572, 1897 |
| HapII | CCGG | 1 cut(s) | 1900 |
| HgaI | GACGC | 3 cut(s) | 453, 846, 1897 |
| HhaI | GCGC | 2 cut(s) | 1749, 1837 |
| Hin6I | GCGC | 2 cut(s) | 1747, 1835 |
| HinP1I | GCGC | 2 cut(s) | 1747, 1835 |
| HinfI | GANTC | 8 cut(s) | 131, 428, 488, 509, 881, 902, 1477, 1619 |
| HpaII | CCGG | 1 cut(s) | 1900 |
| Hpy166II | GTNNAC | 6 cut(s) | 120, 263, 592, 674, 985, 1982 |
| Hpy188III | TCNNGA | 5 cut(s) | 392, 1559, 1668, 1703, 1841 |
| Hpy8I | GTNNAC | 6 cut(s) | 120, 263, 592, 674, 985, 1982 |
| HpyAV | CCTTC | 4 cut(s) | 29, 390, 801, 1674 |
| HpyCH4III | ACNGT | 1 cut(s) | 1488 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 439, 461, 832, 854, 1230, 1271 |
| HpyF3I | CTNAG | 4 cut(s) | 804, 1148, 1839, 1892 |
| HspAI | GCGC | 2 cut(s) | 1747, 1835 |
| KpnI | GGTACC | 1 cut(s) | 1218 |
| Kzo9I | GATC | 5 cut(s) | 325, 388, 1129, 1810, 1855 |
| LmnI | GCTCC | 4 cut(s) | 634, 1027, 1082, 1759 |
| Lsp1109I | GCAGC | 5 cut(s) | 25, 131, 153, 787, 1313 |
| LweI | GCATC | 4 cut(s) | 646, 1146, 1466, 1960 |
| MaeI | CTAG | 4 cut(s) | 24, 1086, 1416, 1668 |
| MaeIII | GTNAC | 5 cut(s) | 66, 201, 307, 718, 1226 |
| MalI | GATC | 5 cut(s) | 327, 390, 1131, 1812, 1857 |
| MboI | GATC | 5 cut(s) | 325, 388, 1129, 1810, 1855 |
| MfeI | CAATTG | 2 cut(s) | 30, 795 |
| MflI | RGATCY | 2 cut(s) | 1129, 1810 |
| MhlI | GDGCHC | 4 cut(s) | 265, 676, 1079, 1756 |
| MlyI | GAGTC | 3 cut(s) | 125, 497, 890 |
| Mph1103I | ATGCAT | 2 cut(s) | 1139, 1459 |
| MroXI | GAANNNNTTC | 1 cut(s) | 220 |
| MspA1I | CMGCKG | 3 cut(s) | 144, 229, 1233 |
| MspI | CCGG | 1 cut(s) | 1900 |
| MspR9I | CCNGG | 3 cut(s) | 96, 1186, 1900 |
| MunI | CAATTG | 2 cut(s) | 30, 795 |
| Mva1269I | GAATGC | 1 cut(s) | 1459 |
| MvaI | CCWGG | 2 cut(s) | 96, 1186 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 439, 461, 832, 854, 1230, 1271 |
| NciI | CCSGG | 1 cut(s) | 1900 |
| NcoI | CCATGG | 2 cut(s) | 61, 1156 |
| NdeII | GATC | 5 cut(s) | 325, 388, 1129, 1810, 1855 |
| NlaIV | GGNNCC | 6 cut(s) | 93, 1216, 1755, 1812, 1898, 1933 |
| NmuCI | GTSAC | 3 cut(s) | 307, 718, 1226 |
| NsiI | ATGCAT | 2 cut(s) | 1139, 1459 |
| NspI | RCATGY | 2 cut(s) | 1034, 1321 |
| PaeI | GCATGC | 1 cut(s) | 1034 |
| PaeR7I | CTCGAG | 2 cut(s) | 459, 852 |
| PciI | ACATGT | 1 cut(s) | 1317 |
| PctI | GAATGC | 1 cut(s) | 1459 |
| PdmI | GAANNNNTTC | 1 cut(s) | 220 |
| PfeI | GAWTC | 5 cut(s) | 428, 509, 902, 1477, 1619 |
| PkrI | GCNGC | 5 cut(s) | 40, 143, 146, 802, 1328 |
| PleI | GAGTC | 3 cut(s) | 125, 496, 889 |
| PpsI | GAGTC | 3 cut(s) | 125, 496, 889 |
| PscI | ACATGT | 1 cut(s) | 1317 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1233 |
| PshBI | ATTAAT | 1 cut(s) | 542 |
| Psp6I | CCWGG | 2 cut(s) | 94, 1184 |
| PspFI | CCCAGC | 1 cut(s) | 225 |
| PspGI | CCWGG | 2 cut(s) | 94, 1184 |
| PspN4I | GGNNCC | 6 cut(s) | 93, 1216, 1755, 1812, 1898, 1933 |
| PspPI | GGNCC | 2 cut(s) | 1571, 1896 |
| PspXI | VCTCGAGB | 2 cut(s) | 459, 852 |
| PstI | CTGCAG | 1 cut(s) | 149 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1271, 1846 |
| PsuI | RGATCY | 2 cut(s) | 1129, 1810 |
| PvuII | CAGCTG | 3 cut(s) | 144, 229, 1233 |
| RsaI | GTAC | 4 cut(s) | 121, 1216, 1350, 1942 |
| RsaNI | GTAC | 4 cut(s) | 120, 1215, 1349, 1941 |
| SatI | GCNGC | 5 cut(s) | 39, 142, 145, 801, 1327 |
| Sau3AI | GATC | 5 cut(s) | 325, 388, 1129, 1810, 1855 |
| Sau96I | GGNCC | 2 cut(s) | 1571, 1896 |
| ScaI | AGTACT | 1 cut(s) | 1942 |
| SchI | GAGTC | 3 cut(s) | 125, 497, 890 |
| ScrFI | CCNGG | 3 cut(s) | 96, 1186, 1900 |
| SduI | GDGCHC | 4 cut(s) | 265, 676, 1079, 1756 |
| SfaNI | GCATC | 4 cut(s) | 646, 1146, 1466, 1960 |
| SfcI | CTRYAG | 2 cut(s) | 145, 1680 |
| Sfr274I | CTCGAG | 2 cut(s) | 459, 852 |
| SlaI | CTCGAG | 2 cut(s) | 459, 852 |
| SmlI | CTYRAG | 2 cut(s) | 459, 852 |
| SmoI | CTYRAG | 2 cut(s) | 459, 852 |
| SphI | GCATGC | 1 cut(s) | 1034 |
| SsiI | CCGC | 1 cut(s) | 1550 |
| SspMI | CTAG | 4 cut(s) | 24, 1086, 1416, 1668 |
| StyD4I | CCNGG | 3 cut(s) | 94, 1184, 1898 |
| StyI | CCWWGG | 2 cut(s) | 61, 1156 |
| TaaI | ACNGT | 1 cut(s) | 1488 |
| TaqI | TCGA | 5 cut(s) | 328, 391, 460, 853, 1702 |
| TaqII | GACCGA | 1 cut(s) | 1230 |
| TatI | WGTACW | 2 cut(s) | 119, 1940 |
| TfiI | GAWTC | 5 cut(s) | 428, 509, 902, 1477, 1619 |
| TscAI | CASTG | 4 cut(s) | 1216, 1231, 1444, 1528 |
| TseFI | GTSAC | 3 cut(s) | 307, 718, 1226 |
| TseI | GCWGC | 5 cut(s) | 38, 141, 144, 800, 1326 |
| Tsp45I | GTSAC | 3 cut(s) | 307, 718, 1226 |
| TspDTI | ATGAA | 7 cut(s) | 459, 567, 852, 960, 1061, 1077, 1374 |
| TspGWI | ACGGA | 1 cut(s) | 1868 |
| TspRI | CASTG | 4 cut(s) | 1216, 1231, 1444, 1528 |
| VneI | GTGCAC | 2 cut(s) | 261, 672 |
| VspI | ATTAAT | 1 cut(s) | 542 |
| XapI | RAATTY | 4 cut(s) | 367, 502, 1251, 1395 |
| XbaI | TCTAGA | 1 cut(s) | 1667 |
| XceI | RCATGY | 2 cut(s) | 1034, 1321 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1163 |
| XhoI | CTCGAG | 2 cut(s) | 459, 852 |
| XmiI | GTMKAC | 1 cut(s) | 1981 |
| XmnI | GAANNNNTTC | 1 cut(s) | 220 |
| XspI | CTAG | 4 cut(s) | 24, 1086, 1416, 1668 |
| ZrmI | AGTACT | 1 cut(s) | 1942 |
| Zsp2I | ATGCAT | 2 cut(s) | 1139, 1459 |