Prupe.1G082700_v2.0.a1

Wiskott-Aldrich syndrome protein family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0016073
Physical Location & Seq
Forward (+)
6138662 .. 6141863
3202 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G082700.1

Sequence Viewer

Length: 396 bp
ATGGCTATCAACAGAGATTCCACTCCCCCACCAATGATCGGCAAGATTGGCCCTTACACTGTGTTCATGACTCCACCCTCCACACCAAAACCACCTGAACCGGTCTTTGATTCCCCCAAGAAGGTGGCCCCACCTCCGGTTCAGCCGCCGCCTCAGCAATTGGTGCAGCCTATGGCTGTTTCAGATTCTGCCGCCAATGGCTCTGTCTTGGGGGTTTTTAAGAATGCCGTGAACAAAGTTCAGAAGGCACATTCAAGTTTGGATGACCATTTGGCACGTTGGTTTGGGTTGAATCAGTCAAAATATCAGTGGGCACTAGATGATTATTATGAGAGCAAGGGATTGGAGAAGGGCGAGAAACCAAAAGAGAGATCTAGCAAAATGCAGAGTGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAM177

Protein Analysis

132

Amino Acids

14.39

Weight (kDa)

9.33

Isoelectric Point (pI)

57.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016073)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G18910
fragaria_vesca FvH4_4g07900
malus_domestica MD13G1249500.v1.1 MD16G1255800.v1.1
prunus_persica Prupe.1G082700_v2.0.a1
pyrus_communis pycom13g21990 pycom16g21700
rosa_chinensis RchiOBHm_Chr4g0401201
rosa_laevigata RLG00000009156
rosa_rugosa Rorug04G0028900
rosa_samantha Rh4AG106400 Rh4BG101100 Rh4CG115400
rosa_wichuraiana Rw4G008610 Rw4G008640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 146, 149, 192
AfiI CCNNNNNNNGG 3 cut(s) 38, 121, 136
AgeI ACCGGT 1 cut(s) 100
AgsI TTSAA 2 cut(s) 255, 292
AlwNI CAGNNNCTG 1 cut(s) 188
AoxI GGCC 2 cut(s) 49, 126
ApeKI GCWGC 1 cut(s) 166
AsiGI ACCGGT 1 cut(s) 100
AspS9I GGNCC 2 cut(s) 50, 127
BaeGI GKGCMC 1 cut(s) 316
BbvCI CCTCAGC 1 cut(s) 153
BbvI GCAGC 1 cut(s) 178
BceAI ACGGC 1 cut(s) 212
BfaI CTAG 2 cut(s) 317, 375
BglII AGATCT 1 cut(s) 371
BisI GCNGC 4 cut(s) 146, 149, 167, 192
BlsI GCNGC 4 cut(s) 147, 150, 168, 193
BmgT120I GGNCC 2 cut(s) 50, 127
BmiI GGNNCC 1 cut(s) 129
Bpu10I CCTNAGC 1 cut(s) 153
BsaWI WCCGGW 2 cut(s) 100, 136
Bsc4I CCNNNNNNNGG 3 cut(s) 38, 121, 136
Bse118I RCCGGY 1 cut(s) 100
BseGI GGATG 1 cut(s) 268
BseLI CCNNNNNNNGG 3 cut(s) 38, 121, 136
BseMII CTCAG 1 cut(s) 167
BseSI GKGCMC 1 cut(s) 316
BseXI GCAGC 1 cut(s) 178
BsgI GTGCAG 1 cut(s) 185
BshFI GGCC 2 cut(s) 51, 128
BshTI ACCGGT 1 cut(s) 100
BsiSI CCGG 2 cut(s) 101, 137
BslI CCNNNNNNNGG 3 cut(s) 38, 121, 136
BsmI GAATGC 1 cut(s) 229
BsnI GGCC 2 cut(s) 51, 128
Bsp1286I GDGCHC 1 cut(s) 316
Bsp143I GATC 2 cut(s) 36, 371
BspACI CCGC 3 cut(s) 146, 149, 192
BspANI GGCC 2 cut(s) 51, 128
BspCNI CTCAG 1 cut(s) 166
BspHI TCATGA 1 cut(s) 66
BspLI GGNNCC 1 cut(s) 129
BsrFI RCCGGY 1 cut(s) 100
BssAI RCCGGY 1 cut(s) 100
BssMI GATC 2 cut(s) 36, 371
Bst4CI ACNGT 1 cut(s) 61
BstAPI GCANNNNNTGC 1 cut(s) 163
BstDEI CTNAG 1 cut(s) 153
BstF5I GGATG 1 cut(s) 268
BstKTI GATC 2 cut(s) 39, 374
BstMBI GATC 2 cut(s) 36, 371
BstMWI GCNNNNNNNGC 3 cut(s) 48, 154, 163
BstSLI GKGCMC 1 cut(s) 316
BstV1I GCAGC 1 cut(s) 178
BstX2I RGATCY 1 cut(s) 371
BstXI CCANNNNNNTGG 1 cut(s) 124
BstYI RGATCY 1 cut(s) 371
BsuRI GGCC 2 cut(s) 51, 128
BtsCI GGATG 1 cut(s) 268
BtsIMutI CAGTG 2 cut(s) 57, 314
CaiI CAGNNNCTG 1 cut(s) 188
CciI TCATGA 1 cut(s) 66
Cfr10I RCCGGY 1 cut(s) 100
Cfr13I GGNCC 2 cut(s) 50, 127
CspAI ACCGGT 1 cut(s) 100
CviAII CATG 1 cut(s) 67
CviJI RGCY 7 cut(s) 5, 51, 128, 145, 169, 176, 201
CviKI_1 RGCY 7 cut(s) 5, 51, 128, 145, 169, 176, 201
DdeI CTNAG 1 cut(s) 153
DpnI GATC 2 cut(s) 38, 373
DpnII GATC 2 cut(s) 36, 371
FaeI CATG 1 cut(s) 70
FaiI YATR 3 cut(s) 68, 173, 330
FatI CATG 1 cut(s) 66
Fnu4HI GCNGC 4 cut(s) 146, 149, 167, 192
FokI GGATG 1 cut(s) 275
Fsp4HI GCNGC 4 cut(s) 146, 149, 167, 192
FspBI CTAG 2 cut(s) 317, 375
GluI GCNGC 4 cut(s) 146, 149, 167, 192
HaeIII GGCC 2 cut(s) 51, 128
HapII CCGG 2 cut(s) 101, 137
Hin1II CATG 1 cut(s) 70
HinfI GANTC 5 cut(s) 17, 70, 110, 185, 292
HpaII CCGG 2 cut(s) 101, 137
Hpy166II GTNNAC 1 cut(s) 232
Hpy188I TCNGA 2 cut(s) 184, 243
Hpy188III TCNNGA 1 cut(s) 67
Hpy8I GTNNAC 1 cut(s) 232
HpyAV CCTTC 3 cut(s) 115, 238, 343
HpyCH4III ACNGT 1 cut(s) 61
HpyCH4IV ACGT 1 cut(s) 277
HpyCH4V TGCA 2 cut(s) 166, 385
HpyF10VI GCNNNNNNNGC 3 cut(s) 48, 154, 163
HpyF3I CTNAG 1 cut(s) 153
HpySE526I ACGT 1 cut(s) 277
Hsp92II CATG 1 cut(s) 70
Kzo9I GATC 2 cut(s) 36, 371
LpnPI CCDG 3 cut(s) 108, 114, 150
Lsp1109I GCAGC 1 cut(s) 178
MaeI CTAG 2 cut(s) 317, 375
MaeII ACGT 1 cut(s) 277
MalI GATC 2 cut(s) 38, 373
MboI GATC 2 cut(s) 36, 371
MfeI CAATTG 1 cut(s) 158
MflI RGATCY 1 cut(s) 371
MhlI GDGCHC 1 cut(s) 316
MluCI AATT 1 cut(s) 158
MlyI GAGTC 1 cut(s) 64
MnlI CCTC 3 cut(s) 88, 144, 162
MseI TTAA 1 cut(s) 219
MspI CCGG 2 cut(s) 101, 137
MunI CAATTG 1 cut(s) 158
Mva1269I GAATGC 1 cut(s) 229
MwoI GCNNNNNNNGC 3 cut(s) 48, 154, 163
NdeII GATC 2 cut(s) 36, 371
NlaIII CATG 1 cut(s) 70
NlaIV GGNNCC 1 cut(s) 129
PagI TCATGA 1 cut(s) 66
PctI GAATGC 1 cut(s) 229
PfeI GAWTC 4 cut(s) 17, 110, 185, 292
PinAI ACCGGT 1 cut(s) 100
PkrI GCNGC 4 cut(s) 147, 150, 168, 193
PleI GAGTC 1 cut(s) 64
PpsI GAGTC 1 cut(s) 64
PspN4I GGNNCC 1 cut(s) 129
PspPI GGNCC 2 cut(s) 50, 127
PstNI CAGNNNCTG 1 cut(s) 188
PsuI RGATCY 1 cut(s) 371
SaqAI TTAA 1 cut(s) 219
SatI GCNGC 4 cut(s) 146, 149, 167, 192
Sau3AI GATC 2 cut(s) 36, 371
Sau96I GGNCC 2 cut(s) 50, 127
SchI GAGTC 1 cut(s) 64
SduI GDGCHC 1 cut(s) 316
SetI ASST 4 cut(s) 97, 126, 136, 280
Sse9I AATT 1 cut(s) 158
SsiI CCGC 3 cut(s) 146, 149, 192
SspMI CTAG 2 cut(s) 317, 375
TaaI ACNGT 1 cut(s) 61
TaiI ACGT 1 cut(s) 280
TasI AATT 1 cut(s) 158
TauI GCSGC 3 cut(s) 148, 151, 194
TfiI GAWTC 4 cut(s) 17, 110, 185, 292
Tru1I TTAA 1 cut(s) 219
Tru9I TTAA 1 cut(s) 219
TscAI CASTG 2 cut(s) 64, 314
TseI GCWGC 1 cut(s) 166
TspDTI ATGAA 1 cut(s) 55
TspRI CASTG 2 cut(s) 64, 314
XspI CTAG 2 cut(s) 317, 375
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.