Rorug04G0028900

Wiskott-Aldrich syndrome protein family member

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
4051181 .. 4083703
32523 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0028900.1

Sequence Viewer

Length: 4902 bp
ATGGGTGGAAAGACTGAAAGAGAGACTCATGGGGTGTTTACCATCTTTGATGCTCAAAAACAACAGCTTCTTCTCACTAACAGAGATACAGCAGAAGAAGAGAAGATGGTTGTGAGTCAGTTGCAGCTATGCGTTTTGCCACATCGGTTTCCGAGACTCAACCCCTCTCCTTCTTCTTCTCCAAACAGGAAATATATGCCGTGCCAGTTTTGGTGTATGAAATCTTCATCTTTACATGGACGTAATTTCATAACTCCAAACAGAGGAAAAGGCAAGGTCAGGTCTCAAAAGACAGGCAATAAACTAGATTCCACTATGTACATAAATGTTGAAGATGACTCGGACACTGAACTTCTTAGGATAGAACAAGTAAAAAGTTCTCAGATTCACCTAGCTAAAGTCTTGATGGGATTGACGTGCTTATATATTCCACTTAGACTGGCAAAGCTAAATGTCGTTGATACTTTCATTAAGATTGTCCAAGAAAGACTTCTCTGCACTGTTCAAAATTTAGGGGCCGCCACCTTGCCTTTTGCCTGTGCTTCTAATTCTCTGAATAAACCACTGCCTCTTGGATTGGATGTGTCGTTGCCATCATTTCAAGATGTTAGATGGAGCTTTCAACGATTATTGTATCTTTTTAACATCCAACTTGAGAAAAATGTTGCTACGTTCTTCATAGTGCTCCTGGTAGCATGTTTCTCATTTGTTATCATTGGTGGTTTCCTATTCTTCAAGTTTAGGGGTAGTAAAGAATCTTTGGAGGACTGCTTCTGGGAAGCTTGGGCATGCCTATGTTCATCATCGACACATCTAAAGCAAAGAACACGTATTGAACGTGTTATCGGTTTCGTTCTTGCTATATGGGGCATATTATTTTACTCCCGCTTATTGAGCACAATGACTGAACAGTTCCGGAGTAATATGTACAAGCTCAGAGAAGGGGCACAAATGCAAGTACTGGAGACTGATCACATCATTATTTGTGGAGTGAACAGTCATCTTTCTTTCATACTAAAGCAAATAAACAAGTATCATGAATTTGCTGTCCGCTTAGGTACTGCTACAGCTAGGAAGCAAAGAATTCTTCTTATGTCTGACTTACCAAGAAAGCAGATGGACAAGTTAGCTGACCATATTGCCAAAGATTTTAACCATATCGATATCCTTACAAAAAGTTGTAGCCTGAGCTTAACAAAATCATATGAAAGAGCCGCTGCCAACAAGGCACGTGCCATAATTATACTGCCAACAAAGACAGATCGGTATGAAGTTGACACTGATGCCTTTCTATCCGTTCTGGCTCTTCAACCTATTCCTAAGATGGAATCCGTTCCCACTATTGTTGAGGTTTCAAGTTCAAATACATGCGAGCTTTTGAAGTCAATCTCAGGGTTGAAAGTAGCGCCTGTGGAGAACGTTTCATCCAAATTATTTGTTCAATGCTCTCGCCAAAAAGGACTCATAAAGATCTACAGACACTTGCTTAACTATCAAAAAAATGTGTTCAATCTTTGGAATTCTCCTAGTCTAGCAGGGCTAAAGTATAGGCAATTAGGGCCTGGATTTCAAGAGGCAGTTGTTTGTGGGCTTTATAGAAACGGGAAGGTATACTTCCACCCAAATGATGATGAGATCTTGCAGGAAACTGACAAAGTATTGTTCATTGCACCTGTCAGTGGGGGTAAGAAACCTCCTATTACTTATTCGAATGTTAAAGAAATAAGCGATGCCGATCGAAGTTTGGAGGATGTAGAAAAGGACAGTGATACTCGATCGCATGCCTTAAAACTAAGGAAAGAAAACACACGTCCCAAGAGAACAGGCTCCAAGGCTTCAGACGGGACTCTAGGACCAAAAGAATTTATACTTCTTCTTGGATGGCGGCCAGACATTGTTGAAATGATTGAAGAATATGACAATTATCTCGGACCTGGGAGTGTCGTGGAGATATTGTCAGATGTACCGTTAGATGACAGAAATAAGGCAAGAAGAGGTGCCGGTCAAGCCAAACTAAAACATGTGCAGGTTTCACATAGGATTGGAAACCCAATGAACTTTGACACTTTACAAGAAACCATAAGCAATATCCAACATTCTTTGAAGAATGAAGATATTCCCTTATCCATTGTTGTAATATCCGATAGAGAATGGCTTCTTGGAGATCCAAACAGGGCAGACAAGCAATCCGCCTATTCCCTTCTTCTTGCTGAAAATATTTGCAACAAACTTGGCGTAAAGGTGCAGAATCTAGTTGCGGAAATCGTGGACTCGAAATTGGGGAAACAAATCACAAGAATAAAGCCATCCCTGACTTATATTGCCGCGGAGGAAGTAATGAGCCTCGTAACAGCTCAAGTTGCTGAGGACAGTGAACTAAATGAGGTGTGGAAAGACATTCTGGATGCAGACGGTGATGAAATATATGTGAAGGATATCAGACTCTATATGAAAGAAGGAGAGACTCCATCCTTCACGGAGCTTGCTGAAAGAGCTCATTTACGGAAGGAAGTTGCCATAGGAAAAGGCAAGGTCAGGTCTCAAAAGACAGGCGATAGACTAGATTCCACCATGTACATAAATGTTGAAGCTGATTCGGACACTGAACTCCTTAGGATAGAACAAGTGAAACGTTCTCAGATTCACCAAGCTAAAGTCTTGATGGGATTGACGTGCTTATATATTCCACTTAGACTGGCAAAGCTAAATGTTGTTGATACTTTCATTAAGATCGTCCAAGAAAGACTTATCTGTGCTGTCCAAACTTTAGAGGCTGCCACGTTGCCTTTTGCCTGTGCTTCTAATTCTCTGAATAAGCCCAAGCCTCTTGGATTGGATGTGTTGTTGCAATCATTTCAAGATGTTAGATGGAGATTTGATCGATTGTTGTATCTTTTTAACGTCCAACTTGAGAAAAACGTTGCCACGTACTTCATAGTGCTCCTGGTAGCATGTGTCTCATTTGTTATCATTGGTGGTTTCCTATATTTCAAGTTTAGGGATAGTAAAGAATCTTTGGAGGACTGCTTCTGGGAAGCTTGGGCATGCCTATGTTCACCTCACACACATCTAAAGCAAAGAACACGTATTGAACGTGTTATTGGTTTCGTTCTTGCTATATGGGGCATATTATTTTACTCCCGCTTATTGAGCACAATGACTGAACAGTTCCGGAGTAATATGTACAAGCTCAGAGAAGGGGCACAATTGCAAGTTCTGGAGACTGATCACATCATTATTTGTGGAGTGAACAGTCATCTTCCTTTCATACTAAAGCAAATAAATAAGTATCATAAAGTTGCTGTCCGCTTAGGTACTGCTACAGTTAGGCAGCAAAGAATTCTTCTCATGTCTGATCTACCAAGAGAGCAGATGCACAAAAAAGTCGACGATATTGCCAAAGATTTTCACCATATCGATATCCTTACAAAAAGTTGTAGCCTGAGCTTAACAAAATCATATGAAAGAGCTGCTGCCAACAAGGCACGTGCCATAATTATACTGCCAAAAAAGGCAGATCGGTATGAAGTTGACACTGATGCCTTTCTATCCGTTCTGGCTCTTCAACCTATTCCTAAGATGGAATCCGTCCCCATTATTGTTGAGGTTTTAAGTTCAAAGACATGCGAGCTTTTGAAGTCAATCTCAGGGTTGAAAGTAGAGCCTGTGGAGAACGTTGCATCCAAGTTATTTGTTCAATGCTCTCGTCAACAAGGACTCATAAAGATCTACAGACACTTGCTTAATTATCGAAAAAATGTTTTCAATCTTTGCAATTCTCCCAGGCTAGCAGGGCTGAAGTATAGTCAATTAGGACCTGGGTTTCAAAAGGCAGTTGTTTGTGGGCTTTATAGAAATGGGAAGATATACTTCCACCCAAATGATGATGAGATCTTGCAGGAAACTGACAAAGTATTGTTCATTTCACCTGTCAATGGGGGTAAGAAGCCTCCTATTACTAATTCAAATGTTAAAGAAATAAGCGATGCCAATCAAAGTTTGGAAGATGTAGAAAAGGACAGTGATACTCAATCACATGCCTTAAAATTAAGGAAAGAAAATACACGTCCCAAGAGAAGAGGCTCCAAGGCATCAGACGAGACTGTAGGACCAACAGAATTTATACTTCTTCTTGGATGGCGGCCAGACATTGTTGAGATGATTGAAGAATATGACAATTATCTCGGACCTGGGAGTGTCGTGGAGATATTATCAGATGTACCGTTAGATGACAGAAATAAGGCAAGAAGAGGTGCCGGTCAAGCCAAACTAAAACATGTGCGGGTTTCACATAGGATTGGAAACCCGATGAACTTTGACACTTTACAAGAAACCATAAGCAATATCCAACATTCTTTGAAGAATGAAGATATTCCCTTATCCATTGTTGTAATATCCGATAGAGAATGGCTTCTTGGAGATCCAAACAGGGCAGACAAGCAATCCGCCTATTCCCTTCTTCTTGCTGAAAATATTTGCAACAAACTTGGCGTGAAGGTGCAGAATCTAGTTACAGAGATCGTGGACTCGAAATTGGGGAAACAAATCACAAGAATAAAGCCATCCCTGACTTATATTGCTGTGGAGGAAGTAATGAGCCTCGTAACAGCTCAAGTCGCCGTGGACAGTGAACTAAATGAGGTGTGGAAAGATATTCTGAATGCAGAAGGTGATGAAATATATGTGAAGGATATCAGACTCTATATGAAAGAAGGAGAGACTCCATCGTTCACGGAGCTTGCTAAAAGAGCACATTTACGGAAAGAAGTTGCCATAGGTTATGTGAAAAACAATAAGAAGGTCATTAATCCAGTTCCCAAATCAGAACCCCTGTCCCTTGAGTTGACAGATTCGTTAATAGTTATATCTGAACTTGAAGGAGAACAACCGATCGTTATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1633

Amino Acids

184.76

Weight (kDa)

8.81

Isoelectric Point (pI)

43.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Castor_Poll_mid PF06241 472 - 572 1.1e-36 Castor and Pollux, part of voltage-gated ion channel
Castor_Poll_mid PF06241 1224 - 1322 1.3e-37 Castor and Pollux, part of voltage-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016073)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G18910
fragaria_vesca FvH4_4g07900
malus_domestica MD13G1249500.v1.1 MD16G1255800.v1.1
prunus_persica Prupe.1G082700_v2.0.a1
pyrus_communis pycom13g21990 pycom16g21700
rosa_chinensis RchiOBHm_Chr4g0401201
rosa_laevigata RLG00000009156
rosa_rugosa Rorug04G0028900
rosa_samantha Rh4AG106400 Rh4BG101100 Rh4CG115400
rosa_wichuraiana Rw4G008610 Rw4G008640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2017
AccB1I GGYRCC 2 cut(s) 1997, 4253
AccI GTMKAC 2 cut(s) 1611, 3387
AccII CGCG 1 cut(s) 2327
AccIII TCCGGA 2 cut(s) 915, 3171
AclI AACGTT 4 cut(s) 1419, 2632, 2919, 3675
AclWI GGATC 2 cut(s) 2159, 4415
AcoI YGGCCR 2 cut(s) 1886, 4142
AcsI RAATTY 7 cut(s) 508, 1040, 1083, 1519, 1862, 3339, 4118
AcuI CTGAAG 2 cut(s) 1821, 3818
AcvI CACGTG 2 cut(s) 1232, 3488
AfiI CCNNNNNNNGG 3 cut(s) 263, 1679, 3935
AflIII ACRYGT 8 cut(s) 827, 838, 1808, 2020, 3083, 3094, 4064, 4276
AjiI CACGTC 4 cut(s) 417, 1811, 2673, 4067
AjnI CCWGG 7 cut(s) 687, 1561, 1933, 2943, 3782, 3817, 4189
AjuI GAANNNNNNNTTGG 8 cut(s) 474, 506, 2142, 2174, 3084, 3116, 4398, 4430
AloI GAACNNNNNNTCC 4 cut(s) 1409, 1441, 3665, 3697
Alw21I GWGCWC 6 cut(s) 687, 899, 2497, 2943, 3155, 4753
AlwI GGATC 2 cut(s) 2159, 4415
Aor13HI TCCGGA 2 cut(s) 915, 3171
AoxI GGCC 4 cut(s) 516, 1559, 1886, 4142
ApeKI GCWGC 6 cut(s) 124, 1217, 2774, 3331, 3470, 3473
ApoI RAATTY 7 cut(s) 508, 1040, 1083, 1519, 1862, 3339, 4118
AseI ATTAAT 1 cut(s) 4806
Asp700I GAANNNNTTC 6 cut(s) 489, 1332, 2115, 2154, 4371, 4410
AspLEI GCGC 1 cut(s) 1408
AspS9I GGNCC 7 cut(s) 516, 1559, 1853, 1931, 3815, 4109, 4187
AsuHPI GGTGA 7 cut(s) 380, 2426, 2636, 3048, 3401, 3918, 4682
AsuII TTCGAA 1 cut(s) 1709
AsuNHI GCTAGC 1 cut(s) 3787
AvaII GGWCC 5 cut(s) 1853, 1931, 3815, 4109, 4187
AxyI CCTNAGG 1 cut(s) 2612
BaeGI GKGCMC 2 cut(s) 949, 3205
BanI GGYRCC 2 cut(s) 1997, 4253
BanII GRGCYC 1 cut(s) 2497
BarI GAAGNNNNNNTAC 2 cut(s) 208, 240
BbrPI CACGTG 2 cut(s) 1232, 3488
Bbv12I GWGCWC 6 cut(s) 687, 899, 2497, 2943, 3155, 4753
BbvCI CCTCAGC 1 cut(s) 2364
BbvI GCAGC 6 cut(s) 136, 1204, 2761, 3343, 3457, 3460
BceAI ACGGC 2 cut(s) 184, 4604
BcgI CGANNNNNNTGC 2 cut(s) 3377, 3411
BciT130I CCWGG 7 cut(s) 689, 1563, 1935, 2945, 3784, 3819, 4191
BclI TGATCA 2 cut(s) 970, 3226
BfmI CTRYAG 5 cut(s) 1065, 1474, 3321, 3730, 4104
BfoI RGCGCY 1 cut(s) 1409
BfuAI ACCTGC 1 cut(s) 2017
BglI GCCNNNNNGGC 2 cut(s) 1226, 3482
BglII AGATCT 4 cut(s) 1470, 1635, 3726, 3891
BmcAI AGTACT 1 cut(s) 960
Bme1390I CCNGG 7 cut(s) 689, 1563, 1935, 2945, 3784, 3819, 4191
Bme18I GGWCC 5 cut(s) 1853, 1931, 3815, 4109, 4187
BmgBI CACGTC 4 cut(s) 417, 1811, 2673, 4067
BmgT120I GGNCC 7 cut(s) 516, 1559, 1853, 1931, 3815, 4109, 4187
BmiI GGNNCC 5 cut(s) 517, 1828, 1999, 4084, 4255
BmrFI CCNGG 7 cut(s) 689, 1563, 1935, 2945, 3784, 3819, 4191
BmsI GCATC 9 cut(s) 40, 1273, 1720, 2395, 3363, 3529, 3689, 3976, 4100
BmtI GCTAGC 1 cut(s) 3791
BpmI CTGGAG 2 cut(s) 983, 3239
Bpu10I CCTNAGC 5 cut(s) 1054, 1187, 2364, 3310, 3443
Bpu14I TTCGAA 1 cut(s) 1709
BpuEI CTTGAG 5 cut(s) 674, 2340, 2930, 4596, 4859
Bsa29I ATCGAT 3 cut(s) 1161, 2881, 3417
BsaAI YACGTR 5 cut(s) 830, 1232, 2928, 3086, 3488
BsaBI GATNNNNATC 2 cut(s) 1734, 3990
BsaI GGTCTC 2 cut(s) 288, 2544
BsaJI CCNNGG 8 cut(s) 1830, 1934, 2325, 3782, 3818, 4086, 4190, 4620
BsaWI WCCGGW 2 cut(s) 915, 3171
BsaXI ACNNNNNCTCC 2 cut(s) 1940, 1970
Bsc4I CCNNNNNNNGG 3 cut(s) 263, 1679, 3935
Bse118I RCCGGY 2 cut(s) 2000, 4256
Bse1I ACTGG 5 cut(s) 205, 444, 966, 2700, 4811
Bse21I CCTNAGG 1 cut(s) 2612
Bse3DI GCAATG 1 cut(s) 1665
Bse8I GATNNNNATC 2 cut(s) 1734, 3990
BseAI TCCGGA 2 cut(s) 915, 3171
BseBI CCWGG 7 cut(s) 689, 1563, 1935, 2945, 3784, 3819, 4191
BseCI ATCGAT 3 cut(s) 1161, 2881, 3417
BseDI CCNNGG 8 cut(s) 1830, 1934, 2325, 3782, 3818, 4086, 4190, 4620
BseJI GATNNNNATC 2 cut(s) 1734, 3990
BseLI CCNNNNNNNGG 3 cut(s) 263, 1679, 3935
BseMI GCAATG 1 cut(s) 1665
BseMII CTCAG 9 cut(s) 395, 949, 1178, 1404, 2355, 2651, 3205, 3434, 3660
BseNI ACTGG 5 cut(s) 205, 444, 966, 2700, 4811
BseSI GKGCMC 2 cut(s) 949, 3205
BseXI GCAGC 6 cut(s) 136, 1204, 2761, 3343, 3457, 3460
BsgI GTGCAG 4 cut(s) 481, 2045, 2264, 4520
Bsh1236I CGCG 1 cut(s) 2327
Bsh1285I CGRYCG 3 cut(s) 1738, 1778, 4893
BshFI GGCC 4 cut(s) 518, 1561, 1888, 4144
BshNI GGYRCC 2 cut(s) 1997, 4253
BshVI ATCGAT 3 cut(s) 1161, 2881, 3417
BsiEI CGRYCG 3 cut(s) 1738, 1778, 4893
BsiHKAI GWGCWC 6 cut(s) 687, 899, 2497, 2943, 3155, 4753
BsiSI CCGG 4 cut(s) 916, 2001, 3172, 4257
BslFI GGGAC 5 cut(s) 1797, 1858, 3575, 4053, 4819
BslI CCNNNNNNNGG 3 cut(s) 263, 1679, 3935
BsmFI GGGAC 5 cut(s) 1797, 1858, 3575, 4053, 4819
BsmI GAATGC 1 cut(s) 4666
BsnI GGCC 4 cut(s) 518, 1561, 1888, 4144
Bso31I GGTCTC 2 cut(s) 288, 2544
Bsp119I TTCGAA 1 cut(s) 1709
Bsp1286I GDGCHC 8 cut(s) 687, 899, 949, 2497, 2943, 3155, 3205, 4753
Bsp13I TCCGGA 2 cut(s) 915, 3171
Bsp1407I TGTACA 4 cut(s) 318, 927, 2574, 3183
BspANI GGCC 4 cut(s) 518, 1561, 1888, 4144
BspCNI CTCAG 9 cut(s) 394, 948, 1179, 1403, 2356, 2650, 3204, 3435, 3659
BspDI ATCGAT 3 cut(s) 1161, 2881, 3417
BspEI TCCGGA 2 cut(s) 915, 3171
BspFNI CGCG 1 cut(s) 2327
BspHI TCATGA 1 cut(s) 1036
BspLI GGNNCC 5 cut(s) 517, 1828, 1999, 4084, 4255
BspMI ACCTGC 1 cut(s) 2017
BspOI GCTAGC 1 cut(s) 3791
BspPI GGATC 2 cut(s) 2159, 4415
BspQI GCTCTTC 2 cut(s) 1311, 3567
BspT104I TTCGAA 1 cut(s) 1709
BspT107I GGYRCC 2 cut(s) 1997, 4253
BspTNI GGTCTC 2 cut(s) 288, 2544
BsrDI GCAATG 1 cut(s) 1665
BsrFI RCCGGY 2 cut(s) 2000, 4256
BsrGI TGTACA 4 cut(s) 318, 927, 2574, 3183
BsrI ACTGG 5 cut(s) 205, 444, 966, 2700, 4811
BssAI RCCGGY 2 cut(s) 2000, 4256
BssECI CCNNGG 8 cut(s) 1830, 1934, 2325, 3782, 3818, 4086, 4190, 4620
BssNAI GTATAC 1 cut(s) 1612
BssT1I CCWWGG 2 cut(s) 1830, 4086
Bst1107I GTATAC 1 cut(s) 1612
Bst2UI CCWGG 7 cut(s) 689, 1563, 1935, 2945, 3784, 3819, 4191
Bst6I CTCTTC 6 cut(s) 93, 1311, 1987, 3567, 4072, 4243
BstAUI TGTACA 4 cut(s) 318, 927, 2574, 3183
BstBAI YACGTR 5 cut(s) 830, 1232, 2928, 3086, 3488
BstBI TTCGAA 1 cut(s) 1709
BstC8I GCNNGC 8 cut(s) 790, 1373, 1782, 2484, 3046, 3629, 3789, 4740
BstDSI CCRYGG 2 cut(s) 2325, 4620
BstFNI CGCG 1 cut(s) 2327
BstH2I RGCGCY 1 cut(s) 1409
BstHHI GCGC 1 cut(s) 1408
BstMCI CGRYCG 3 cut(s) 1738, 1778, 4893
BstNI CCWGG 7 cut(s) 689, 1563, 1935, 2945, 3784, 3819, 4191
BstSCI CCNGG 7 cut(s) 687, 1561, 1933, 2943, 3782, 3817, 4189
BstSFI CTRYAG 5 cut(s) 1065, 1474, 3321, 3730, 4104
BstSLI GKGCMC 2 cut(s) 949, 3205
BstUI CGCG 1 cut(s) 2327
BstV1I GCAGC 6 cut(s) 136, 1204, 2761, 3343, 3457, 3460
BstX2I RGATCY 6 cut(s) 1470, 1635, 2164, 3726, 3891, 4420
BstYI RGATCY 6 cut(s) 1470, 1635, 2164, 3726, 3891, 4420
BstZ17I GTATAC 1 cut(s) 1612
Bsu15I ATCGAT 3 cut(s) 1161, 2881, 3417
Bsu36I CCTNAGG 1 cut(s) 2612
BsuRI GGCC 4 cut(s) 518, 1561, 1888, 4144
BsuTUI ATCGAT 3 cut(s) 1161, 2881, 3417
BtgI CCRYGG 2 cut(s) 2325, 4620
BtgZI GCGATG 2 cut(s) 1743, 3999
BtrI CACGTC 4 cut(s) 417, 1811, 2673, 4067
BtsI GCAGTG 1 cut(s) 563
BveI ACCTGC 1 cut(s) 2017
Cac8I GCNNGC 8 cut(s) 790, 1373, 1782, 2484, 3046, 3629, 3789, 4740
CciI TCATGA 1 cut(s) 1036
CfoI GCGC 1 cut(s) 1408
Cfr10I RCCGGY 2 cut(s) 2000, 4256
Cfr13I GGNCC 7 cut(s) 516, 1559, 1853, 1931, 3815, 4109, 4187
Cfr42I CCGCGG 1 cut(s) 2328
ClaI ATCGAT 3 cut(s) 1161, 2881, 3417
CspCI CAANNNNNGTGG 2 cut(s) 1327, 1362
EaeI YGGCCR 2 cut(s) 1886, 4142
Eam1104I CTCTTC 6 cut(s) 93, 1311, 1987, 3567, 4072, 4243
EarI CTCTTC 6 cut(s) 93, 1311, 1987, 3567, 4072, 4243
EciI GGCGGA 2 cut(s) 2179, 4435
Ecl136II GAGCTC 1 cut(s) 2495
Eco130I CCWWGG 2 cut(s) 1830, 4086
Eco24I GRGCYC 1 cut(s) 2497
Eco31I GGTCTC 2 cut(s) 288, 2544
Eco32I GATATC 4 cut(s) 1165, 2437, 3421, 4693
Eco47I GGWCC 5 cut(s) 1853, 1931, 3815, 4109, 4187
Eco53kI GAGCTC 1 cut(s) 2495
Eco57I CTGAAG 2 cut(s) 1821, 3818
Eco72I CACGTG 2 cut(s) 1232, 3488
Eco81I CCTNAGG 1 cut(s) 2612
EcoICRI GAGCTC 1 cut(s) 2495
EcoO109I RGGNCCY 2 cut(s) 1559, 3815
EcoRI GAATTC 3 cut(s) 1083, 1519, 3339
EcoRII CCWGG 7 cut(s) 687, 1561, 1933, 2943, 3782, 3817, 4189
EcoRV GATATC 4 cut(s) 1165, 2437, 3421, 4693
EcoT14I CCWWGG 2 cut(s) 1830, 4086
EcoT38I GRGCYC 1 cut(s) 2497
ErhI CCWWGG 2 cut(s) 1830, 4086
FalI AAGNNNNNCTT 8 cut(s) 474, 506, 1598, 1630, 2730, 2762, 3854, 3886
FaqI GGGAC 5 cut(s) 1797, 1858, 3575, 4053, 4819
FauI CCCGC 3 cut(s) 893, 3149, 4275
FauNDI CATATG 2 cut(s) 1204, 3460
FbaI TGATCA 2 cut(s) 970, 3226
FblI GTMKAC 2 cut(s) 1611, 3387
FriOI GRGCYC 1 cut(s) 2497
GlaI GCGC 1 cut(s) 1407
GsuI CTGGAG 2 cut(s) 983, 3239
HaeII RGCGCY 1 cut(s) 1409
HaeIII GGCC 4 cut(s) 518, 1561, 1888, 4144
HapII CCGG 4 cut(s) 916, 2001, 3172, 4257
HhaI GCGC 1 cut(s) 1408
Hin6I GCGC 1 cut(s) 1406
HinP1I GCGC 1 cut(s) 1406
HincII GTYRAC 5 cut(s) 1276, 3388, 3532, 3710, 4845
HindII GTYRAC 5 cut(s) 1276, 3388, 3532, 3710, 4845
HindIII AAGCTT 2 cut(s) 780, 3036
HpaII CCGG 4 cut(s) 916, 2001, 3172, 4257
HphI GGTGA 7 cut(s) 380, 2426, 2636, 3048, 3401, 3918, 4682
Hpy99I CGWCG 1 cut(s) 3392
HspAI GCGC 1 cut(s) 1406
Kpn2I TCCGGA 2 cut(s) 915, 3171
Ksp22I TGATCA 2 cut(s) 970, 3226
KspI CCGCGG 1 cut(s) 2328
LguI GCTCTTC 2 cut(s) 1311, 3567
LmnI GCTCC 7 cut(s) 615, 690, 1832, 2479, 2946, 4088, 4735
Lsp1109I GCAGC 6 cut(s) 136, 1204, 2761, 3343, 3457, 3460
LweI GCATC 9 cut(s) 40, 1273, 1720, 2395, 3363, 3529, 3689, 3976, 4100
MaeIII GTNAC 3 cut(s) 2347, 4510, 4603
MfeI CAATTG 1 cut(s) 3206
MflI RGATCY 6 cut(s) 1470, 1635, 2164, 3726, 3891, 4420
MhlI GDGCHC 8 cut(s) 687, 899, 949, 2497, 2943, 3155, 3205, 4753
MmeI TCCRAC 4 cut(s) 673, 2116, 2929, 4372
MroI TCCGGA 2 cut(s) 915, 3171
MroXI GAANNNNTTC 6 cut(s) 489, 1332, 2115, 2154, 4371, 4410
MslI CAYNNNNRTG 4 cut(s) 793, 1623, 3049, 3879
MspA1I CMGCKG 2 cut(s) 1217, 2327
MspI CCGG 4 cut(s) 916, 2001, 3172, 4257
MspR9I CCNGG 7 cut(s) 689, 1563, 1935, 2945, 3784, 3819, 4191
MunI CAATTG 1 cut(s) 3206
Mva1269I GAATGC 1 cut(s) 4666
MvaI CCWGG 7 cut(s) 689, 1563, 1935, 2945, 3784, 3819, 4191
MvnI CGCG 1 cut(s) 2327
NdeI CATATG 2 cut(s) 1204, 3460
NheI GCTAGC 1 cut(s) 3787
NlaIV GGNNCC 5 cut(s) 517, 1828, 1999, 4084, 4255
NspV TTCGAA 1 cut(s) 1709
PaeI GCATGC 3 cut(s) 792, 1784, 3048
PagI TCATGA 1 cut(s) 1036
PciI ACATGT 2 cut(s) 2020, 4276
PciSI GCTCTTC 2 cut(s) 1311, 3567
PcsI WCGNNNNNNNCGW 2 cut(s) 835, 3091
PctI GAATGC 1 cut(s) 4666
PdmI GAANNNNTTC 6 cut(s) 489, 1332, 2115, 2154, 4371, 4410
Ple19I CGATCG 3 cut(s) 1738, 1778, 4893
PmaCI CACGTG 2 cut(s) 1232, 3488
PmlI CACGTG 2 cut(s) 1232, 3488
Ppu21I YACGTR 5 cut(s) 830, 1232, 2928, 3086, 3488
PpuMI RGGWCCY 1 cut(s) 3815
PscI ACATGT 2 cut(s) 2020, 4276
PshBI ATTAAT 1 cut(s) 4806
Psp124BI GAGCTC 1 cut(s) 2497
Psp1406I AACGTT 4 cut(s) 1419, 2632, 2919, 3675
Psp5II RGGWCCY 1 cut(s) 3815
Psp6I CCWGG 7 cut(s) 687, 1561, 1933, 2943, 3782, 3817, 4189
PspCI CACGTG 2 cut(s) 1232, 3488
PspGI CCWGG 7 cut(s) 687, 1561, 1933, 2943, 3782, 3817, 4189
PspN4I GGNNCC 5 cut(s) 517, 1828, 1999, 4084, 4255
PspPI GGNCC 7 cut(s) 516, 1559, 1853, 1931, 3815, 4109, 4187
PspPPI RGGWCCY 1 cut(s) 3815
PsuI RGATCY 6 cut(s) 1470, 1635, 2164, 3726, 3891, 4420
PvuI CGATCG 3 cut(s) 1738, 1778, 4893
RseI CAYNNNNRTG 4 cut(s) 793, 1623, 3049, 3879
SacI GAGCTC 1 cut(s) 2497
SacII CCGCGG 1 cut(s) 2328
SalI GTCGAC 1 cut(s) 3386
SapI GCTCTTC 2 cut(s) 1311, 3567
Sau96I GGNCC 7 cut(s) 516, 1559, 1853, 1931, 3815, 4109, 4187
ScaI AGTACT 1 cut(s) 960
ScrFI CCNGG 7 cut(s) 689, 1563, 1935, 2945, 3784, 3819, 4191
SduI GDGCHC 8 cut(s) 687, 899, 949, 2497, 2943, 3155, 3205, 4753
SfaNI GCATC 9 cut(s) 40, 1273, 1720, 2395, 3363, 3529, 3689, 3976, 4100
SfcI CTRYAG 5 cut(s) 1065, 1474, 3321, 3730, 4104
Sfr303I CCGCGG 1 cut(s) 2328
SfuI TTCGAA 1 cut(s) 1709
SgrBI CCGCGG 1 cut(s) 2328
SinI GGWCC 5 cut(s) 1853, 1931, 3815, 4109, 4187
SmiMI CAYNNNNRTG 4 cut(s) 793, 1623, 3049, 3879
SmlI CTYRAG 5 cut(s) 653, 2355, 2909, 4611, 4838
SmoI CTYRAG 5 cut(s) 653, 2355, 2909, 4611, 4838
SphI GCATGC 3 cut(s) 792, 1784, 3048
SspI AATATT 2 cut(s) 2218, 4474
SstI GAGCTC 1 cut(s) 2497
StyD4I CCNGG 7 cut(s) 687, 1561, 1933, 2943, 3782, 3817, 4189
StyI CCWWGG 2 cut(s) 1830, 4086
TatI WGTACW 5 cut(s) 318, 927, 958, 2574, 3183
TauI GCSGC 5 cut(s) 521, 1217, 1888, 2327, 4144
TseI GCWGC 6 cut(s) 124, 1217, 2774, 3331, 3470, 3473
TspGWI ACGGA 8 cut(s) 1285, 1321, 2492, 2518, 3541, 3577, 4748, 4774
VpaK11BI GGWCC 5 cut(s) 1853, 1931, 3815, 4109, 4187
VspI ATTAAT 1 cut(s) 4806
XapI RAATTY 7 cut(s) 508, 1040, 1083, 1519, 1862, 3339, 4118
XcmI CCANNNNNNNNNTGG 1 cut(s) 3997
XmiI GTMKAC 2 cut(s) 1611, 3387
XmnI GAANNNNTTC 6 cut(s) 489, 1332, 2115, 2154, 4371, 4410
ZrmI AGTACT 1 cut(s) 960
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.