Prupe.1G099400_v2.0.a1

5'-nucleotidase domain-containing protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
7933418 .. 7942038
8621 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G099400.2

Sequence Viewer

Length: 1656 bp
ATGGCCTGCTTTCGTAGGCTGCTTCCTCTCTGCTCTTCCATCAACAGGACGACCTTTTCATCTTCTGGTTCTGGAGTTGTACAAGGTTTTCGAAGCTACGGTGGAATTGCTTCGCCGGAGCAAACTCTGTTGAAATTGGAAGATGCAGAGACTCGAGCTGGAGCTGATACTTTAGTTCTTGATGATGAGATAGCACAAATTGGACGTGAATTTCATGCCGCGAAGCAGAGTTTCCTCAGGGTTCCAGAGGCACTTAAAGCAATGCCTAAAATGAATCCGGAAGGGATATATGTAAATAAAAACCTGAGATTGGACAGTATTCAAGTTTATGGATTTGACTATGACTACACACTGGCTCATTACTCATCCAATTTACAGAGCTTGATATATGATCTTGCAAAGGAGCATATGGTAAATGAGTTTCATTATCCTGAAATTTGCATGGAATTTAAGTATGATCCGACTTTTCCAATCAGAGGATTGTACTATGATAAGCTAAAAGGGTGTCTCTTGAAGCTGGATTTTTTTGGATCAATTGAGTCAGACGGATGCTACTATGGTCGTCGTAAGCTTAGCAGGAAGGAAATAGAAGAGATATATGGCACACGGCATATTGGTCGTGATCAAGCCCGGAGACTTGTTGGATTGATGGATTTCTTTTGCTTTAGCGAGGCATGCCTCATTGCAGATATCGTGCAATATTTTGTTGATGCTAAGTTGGAATTTGATGCTTGTTACATCTATCAAGATGTAAATCGTGCAATTCAGCATGTTCACCGTAGTGGTGTGGCTCATAGAGGAATTCTTTCTGACCCCCATAAATATCTTGTAAAAAATGGTCAGCTGTTGCACTTTCTCAAGATGCTCAGGGAGAAGGGAAAGAAACTATTCCTGTTGACTAACTCTCCATATTACTTTGTGGATGGAGGAATGAGGTTTATGTTGGAGGATTCCACGGATTTCAGAGACTCCTGGAGGGAACTTTTTGATGTTGTGATTGCTAAAGCTAATAAGCCAGATTTCTACACATCTGAGCATCCCTTCCGTTGCTATGACGCAGAGAAGGACACTTTAGCTTTCACGAAGGTGGATGCATTTCTTCCTAATAAAATATATTACCATGGATGCCTTAAATCCTTCCTTCAAATTACCAAATGGAAGGGACCAGAGGTGATATACTTTGGAGATCACCTATTTAGCGACCTTAGGGGGCCTGCAAAAGCTGGTTGGCGCACTGCTGCTATAATCCACGAACTAGAAGATGAAATACTTATACAAAATGAGGATGCTTACCGCTTGGAACAGGCGAAATTTCATATAGTACAAGAATTGCTTGGTAGAGTGCATGCTACTGTAGCTAATAGCCAGAAAAGTGAAGCCTACACATCACTGTTGGAGGAGTTAAATGACTGGAGGCACAAGTCAAGCCATAAGATGAAGAGAATGTTTAATAAGTCTTTTGGAGCCACCTTCCTTACTGATAGAGGTCAAGAATCTGCTTTCGCGTATCATATTCATCAATATGCAGATGTCTATACCAGTAAGCCAGAGAATTTTTTGCTCTATCCTTCTGAAGCATGGCTTCATGTACCCTTTGATATTAAGATTATGCCACATCATGTGAAGGTTTCTTCGAGCTTGTTCAAAAATGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

552

Amino Acids

63.83

Weight (kDa)

6.77

Isoelectric Point (pI)

51.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 221, 1505
AccIII TCCGGA 1 cut(s) 277
AciI CCGC 2 cut(s) 219, 1294
AclWI GGATC 2 cut(s) 452, 538
AcsI RAATTY 7 cut(s) 209, 435, 446, 722, 801, 1310, 1552
AcuI CTGAAG 1 cut(s) 1593
AfaI GTAC 4 cut(s) 81, 485, 1323, 1590
AfiI CCNNNNNNNGG 3 cut(s) 45, 310, 476
AgsI TTSAA 5 cut(s) 133, 323, 514, 1145, 1645
AjiI CACGTC 1 cut(s) 206
AjnI CCWGG 1 cut(s) 971
AleI CACNNNNGTG 2 cut(s) 780, 1085
Alw26I GTCTC 4 cut(s) 143, 512, 628, 960
AlwI GGATC 2 cut(s) 452, 538
Ama87I CYCGRG 1 cut(s) 153
Aor13HI TCCGGA 1 cut(s) 277
AoxI GGCC 2 cut(s) 3, 1211
ApeKI GCWGC 2 cut(s) 19, 1238
ApoI RAATTY 7 cut(s) 209, 435, 446, 722, 801, 1310, 1552
Asp700I GAANNNNTTC 3 cut(s) 109, 805, 887
AspLEI GCGC 1 cut(s) 1233
AspS9I GGNCC 2 cut(s) 1163, 1211
AsuC2I CCSGG 1 cut(s) 631
AsuHPI GGTGA 3 cut(s) 767, 1181, 1183
AsuII TTCGAA 1 cut(s) 91
AvaI CYCGRG 1 cut(s) 153
AvaII GGWCC 1 cut(s) 1163
AxyI CCTNAGG 2 cut(s) 236, 1205
BaeI ACNNNNGTAYC 2 cut(s) 159, 192
BarI GAAGNNNNNNTAC 2 cut(s) 1251, 1283
BbvI GCAGC 2 cut(s) 6, 1225
BccI CCATC 3 cut(s) 47, 643, 917
BceAI ACGGC 1 cut(s) 623
BcgI CGANNNNNNTGC 2 cut(s) 599, 633
BciT130I CCWGG 1 cut(s) 973
BclI TGATCA 1 cut(s) 622
BcnI CCSGG 1 cut(s) 631
BcoDI GTCTC 4 cut(s) 143, 512, 628, 960
BfaI CTAG 1 cut(s) 1256
BfmI CTRYAG 1 cut(s) 1353
BisI GCNGC 3 cut(s) 20, 219, 1239
BlpI GCTNAGC 1 cut(s) 572
BlsI GCNGC 3 cut(s) 21, 220, 1240
Bme1390I CCNGG 2 cut(s) 631, 973
Bme18I GGWCC 1 cut(s) 1163
BmeT110I CYCGRG 1 cut(s) 153
BmgBI CACGTC 1 cut(s) 206
BmgT120I GGNCC 2 cut(s) 1163, 1211
BmiI GGNNCC 4 cut(s) 243, 1164, 1212, 1465
BmrFI CCNGG 2 cut(s) 631, 973
BmsI GCATC 9 cut(s) 133, 539, 700, 718, 852, 1045, 1081, 1115, 1276
BpmI CTGGAG 4 cut(s) 93, 180, 994, 1432
Bpu10I CCTNAGC 1 cut(s) 866
Bpu1102I GCTNAGC 1 cut(s) 572
Bpu14I TTCGAA 1 cut(s) 91
BpuEI CTTGAG 1 cut(s) 842
BpuMI CCSGG 1 cut(s) 631
BsaBI GATNNNNATC 1 cut(s) 753
BsaJI CCNNGG 2 cut(s) 954, 1120
BsaWI WCCGGW 1 cut(s) 277
BsaXI ACNNNNNCTCC 2 cut(s) 889, 919
Bsc4I CCNNNNNNNGG 3 cut(s) 45, 310, 476
Bse1I ACTGG 3 cut(s) 357, 1415, 1539
Bse21I CCTNAGG 2 cut(s) 236, 1205
Bse3DI GCAATG 2 cut(s) 267, 681
Bse8I GATNNNNATC 1 cut(s) 753
BseAI TCCGGA 1 cut(s) 277
BseBI CCWGG 1 cut(s) 973
BseDI CCNNGG 2 cut(s) 954, 1120
BseGI GGATG 7 cut(s) 365, 554, 928, 1036, 1096, 1130, 1291
BseJI GATNNNNATC 1 cut(s) 753
BseLI CCNNNNNNNGG 3 cut(s) 45, 310, 476
BseMI GCAATG 2 cut(s) 267, 681
BseMII CTCAG 4 cut(s) 250, 296, 880, 1023
BseNI ACTGG 3 cut(s) 357, 1415, 1539
BseRI GAGGAG 1 cut(s) 1412
BseXI GCAGC 2 cut(s) 6, 1225
Bsh1236I CGCG 2 cut(s) 221, 1505
BshFI GGCC 2 cut(s) 5, 1213
BsiHKCI CYCGRG 1 cut(s) 153
BsiSI CCGG 3 cut(s) 116, 278, 631
BslFI GGGAC 1 cut(s) 1176
BslI CCNNNNNNNGG 3 cut(s) 45, 310, 476
BsmAI GTCTC 4 cut(s) 143, 512, 628, 960
BsmFI GGGAC 1 cut(s) 1176
BsnI GGCC 2 cut(s) 5, 1213
BsoBI CYCGRG 1 cut(s) 153
Bsp119I TTCGAA 1 cut(s) 91
Bsp13I TCCGGA 1 cut(s) 277
Bsp1407I TGTACA 1 cut(s) 79
Bsp143I GATC 5 cut(s) 391, 457, 530, 622, 1186
Bsp1720I GCTNAGC 1 cut(s) 572
Bsp19I CCATGG 1 cut(s) 1120
BspACI CCGC 2 cut(s) 219, 1294
BspANI GGCC 2 cut(s) 5, 1213
BspCNI CTCAG 4 cut(s) 249, 297, 879, 1024
BspEI TCCGGA 1 cut(s) 277
BspFNI CGCG 2 cut(s) 221, 1505
BspLI GGNNCC 4 cut(s) 243, 1164, 1212, 1465
BspPI GGATC 2 cut(s) 452, 538
BspQI GCTCTTC 1 cut(s) 40
BspT104I TTCGAA 1 cut(s) 91
BsrDI GCAATG 2 cut(s) 267, 681
BsrGI TGTACA 1 cut(s) 79
BsrI ACTGG 3 cut(s) 357, 1415, 1539
BssECI CCNNGG 2 cut(s) 954, 1120
BssMI GATC 5 cut(s) 391, 457, 530, 622, 1186
BssT1I CCWWGG 1 cut(s) 1120
Bst2UI CCWGG 1 cut(s) 973
Bst4CI ACNGT 5 cut(s) 101, 317, 779, 1354, 1392
Bst6I CTCTTC 3 cut(s) 40, 585, 1433
BstAUI TGTACA 1 cut(s) 79
BstBI TTCGAA 1 cut(s) 91
BstC8I GCNNGC 4 cut(s) 7, 676, 1215, 1347
BstDEI CTNAG 7 cut(s) 236, 305, 572, 714, 866, 1032, 1205
BstDSI CCRYGG 2 cut(s) 954, 1120
BstF5I GGATG 7 cut(s) 365, 554, 928, 1036, 1096, 1130, 1291
BstFNI CGCG 2 cut(s) 221, 1505
BstHHI GCGC 1 cut(s) 1233
BstKTI GATC 5 cut(s) 394, 460, 533, 625, 1189
BstMAI GTCTC 4 cut(s) 143, 512, 628, 960
BstMBI GATC 5 cut(s) 391, 457, 530, 622, 1186
BstMWI GCNNNNNNNGC 3 cut(s) 257, 675, 1355
BstNI CCWGG 1 cut(s) 973
BstNSI RCATGY 3 cut(s) 678, 773, 1349
BstSCI CCNGG 2 cut(s) 629, 971
BstSFI CTRYAG 1 cut(s) 1353
BstUI CGCG 2 cut(s) 221, 1505
BstV1I GCAGC 2 cut(s) 6, 1225
Bsu36I CCTNAGG 2 cut(s) 236, 1205
BsuRI GGCC 2 cut(s) 5, 1213
BtgI CCRYGG 2 cut(s) 954, 1120
BtrI CACGTC 1 cut(s) 206
BtsCI GGATG 7 cut(s) 365, 554, 928, 1036, 1096, 1130, 1291
BtsI GCAGTG 1 cut(s) 1233
BtsIMutI CAGTG 3 cut(s) 350, 1233, 1388
Cac8I GCNNGC 4 cut(s) 7, 676, 1215, 1347
CfoI GCGC 1 cut(s) 1233
Cfr13I GGNCC 2 cut(s) 1163, 1211
CseI GACGC 1 cut(s) 1064
Csp6I GTAC 4 cut(s) 80, 484, 1322, 1589
CviAII CATG 9 cut(s) 215, 442, 675, 770, 1121, 1346, 1578, 1586, 1619
CviQI GTAC 4 cut(s) 80, 484, 1322, 1589
DdeI CTNAG 7 cut(s) 236, 305, 572, 714, 866, 1032, 1205
DpnI GATC 5 cut(s) 393, 459, 532, 624, 1188
DpnII GATC 5 cut(s) 391, 457, 530, 622, 1186
Eam1104I CTCTTC 3 cut(s) 40, 585, 1433
EarI CTCTTC 3 cut(s) 40, 585, 1433
Eco130I CCWWGG 1 cut(s) 1120
Eco32I GATATC 1 cut(s) 691
Eco47I GGWCC 1 cut(s) 1163
Eco57I CTGAAG 1 cut(s) 1593
Eco81I CCTNAGG 2 cut(s) 236, 1205
Eco88I CYCGRG 1 cut(s) 153
EcoO109I RGGNCCY 1 cut(s) 1211
EcoRI GAATTC 1 cut(s) 801
EcoRII CCWGG 1 cut(s) 971
EcoRV GATATC 1 cut(s) 691
EcoT14I CCWWGG 1 cut(s) 1120
EcoT22I ATGCAT 1 cut(s) 1096
ErhI CCWWGG 1 cut(s) 1120
FaeI CATG 9 cut(s) 218, 445, 678, 773, 1124, 1349, 1581, 1589, 1622
FalI AAGNNNNNCTT 4 cut(s) 1317, 1349, 1566, 1598
FaqI GGGAC 1 cut(s) 1176
FatI CATG 9 cut(s) 214, 441, 674, 769, 1120, 1345, 1577, 1585, 1618
FauNDI CATATG 1 cut(s) 408
FbaI TGATCA 1 cut(s) 622
Fnu4HI GCNGC 3 cut(s) 20, 219, 1239
FokI GGATG 7 cut(s) 352, 561, 935, 1023, 1103, 1137, 1298
Fsp4HI GCNGC 3 cut(s) 20, 219, 1239
FspBI CTAG 1 cut(s) 1256
GlaI GCGC 1 cut(s) 1232
GluI GCNGC 3 cut(s) 20, 219, 1239
GsuI CTGGAG 4 cut(s) 93, 180, 994, 1432
HaeIII GGCC 2 cut(s) 5, 1213
HapII CCGG 3 cut(s) 116, 278, 631
HgaI GACGC 1 cut(s) 1064
HhaI GCGC 1 cut(s) 1233
Hin1II CATG 9 cut(s) 218, 445, 678, 773, 1124, 1349, 1581, 1589, 1622
Hin6I GCGC 1 cut(s) 1231
HinP1I GCGC 1 cut(s) 1231
HincII GTYRAC 1 cut(s) 897
HindII GTYRAC 1 cut(s) 897
HindIII AAGCTT 1 cut(s) 569
HinfI GANTC 6 cut(s) 151, 274, 539, 950, 968, 1493
HpaII CCGG 3 cut(s) 116, 278, 631
HphI GGTGA 3 cut(s) 767, 1181, 1183
Hpy166II GTNNAC 2 cut(s) 775, 897
Hpy188I TCNGA 7 cut(s) 462, 476, 544, 811, 965, 1033, 1573
Hpy8I GTNNAC 2 cut(s) 775, 897
Hpy99I CGWCG 1 cut(s) 567
HpyCH4III ACNGT 5 cut(s) 101, 317, 779, 1354, 1392
HpyCH4IV ACGT 1 cut(s) 205
HpyF10VI GCNNNNNNNGC 3 cut(s) 257, 675, 1355
HpyF3I CTNAG 7 cut(s) 236, 305, 572, 714, 866, 1032, 1205
HpySE526I ACGT 1 cut(s) 205
Hsp92II CATG 9 cut(s) 218, 445, 678, 773, 1124, 1349, 1581, 1589, 1622
HspAI GCGC 1 cut(s) 1231
Kpn2I TCCGGA 1 cut(s) 277
Ksp22I TGATCA 1 cut(s) 622
Kzo9I GATC 5 cut(s) 391, 457, 530, 622, 1186
LguI GCTCTTC 1 cut(s) 40
LmnI GCTCC 4 cut(s) 118, 161, 403, 1463
Lsp1109I GCAGC 2 cut(s) 6, 1225
LweI GCATC 9 cut(s) 133, 539, 700, 718, 852, 1045, 1081, 1115, 1276
MaeI CTAG 1 cut(s) 1256
MaeII ACGT 1 cut(s) 205
MaeIII GTNAC 1 cut(s) 734
MalI GATC 5 cut(s) 393, 459, 532, 624, 1188
MboI GATC 5 cut(s) 391, 457, 530, 622, 1186
MboII GAAGA 8 cut(s) 27, 54, 152, 602, 1091, 1271, 1450, 1623
MfeI CAATTG 1 cut(s) 534
MlyI GAGTC 3 cut(s) 145, 548, 962
MmeI TCCRAC 5 cut(s) 485, 622, 699, 924, 1374
Mph1103I ATGCAT 1 cut(s) 1096
MroI TCCGGA 1 cut(s) 277
MroXI GAANNNNTTC 3 cut(s) 109, 805, 887
MseI TTAA 6 cut(s) 255, 450, 1131, 1403, 1449, 1602
MslI CAYNNNNRTG 3 cut(s) 780, 1085, 1521
MspA1I CMGCKG 1 cut(s) 844
MspI CCGG 3 cut(s) 116, 278, 631
MspR9I CCNGG 2 cut(s) 631, 973
MunI CAATTG 1 cut(s) 534
MvaI CCWGG 1 cut(s) 973
MvnI CGCG 2 cut(s) 221, 1505
MwoI GCNNNNNNNGC 3 cut(s) 257, 675, 1355
NciI CCSGG 1 cut(s) 631
NcoI CCATGG 1 cut(s) 1120
NdeI CATATG 1 cut(s) 408
NdeII GATC 5 cut(s) 391, 457, 530, 622, 1186
NlaIII CATG 9 cut(s) 218, 445, 678, 773, 1124, 1349, 1581, 1589, 1622
NlaIV GGNNCC 4 cut(s) 243, 1164, 1212, 1465
NsiI ATGCAT 1 cut(s) 1096
NspI RCATGY 3 cut(s) 678, 773, 1349
NspV TTCGAA 1 cut(s) 91
OliI CACNNNNGTG 2 cut(s) 780, 1085
PaeI GCATGC 2 cut(s) 678, 1349
PaeR7I CTCGAG 1 cut(s) 153
PciSI GCTCTTC 1 cut(s) 40
PdmI GAANNNNTTC 3 cut(s) 109, 805, 887
PfeI GAWTC 3 cut(s) 274, 950, 1493
PfoI TCCNGGA 1 cut(s) 971
PkrI GCNGC 3 cut(s) 21, 220, 1240
PleI GAGTC 3 cut(s) 145, 547, 962
PpsI GAGTC 3 cut(s) 145, 547, 962
Psp6I CCWGG 1 cut(s) 971
PspGI CCWGG 1 cut(s) 971
PspN4I GGNNCC 4 cut(s) 243, 1164, 1212, 1465
PspPI GGNCC 2 cut(s) 1163, 1211
PspXI VCTCGAGB 1 cut(s) 153
PvuII CAGCTG 1 cut(s) 844
RsaI GTAC 4 cut(s) 81, 485, 1323, 1590
RsaNI GTAC 4 cut(s) 80, 484, 1322, 1589
RseI CAYNNNNRTG 3 cut(s) 780, 1085, 1521
SapI GCTCTTC 1 cut(s) 40
SaqAI TTAA 6 cut(s) 255, 450, 1131, 1403, 1449, 1602
SatI GCNGC 3 cut(s) 20, 219, 1239
Sau3AI GATC 5 cut(s) 391, 457, 530, 622, 1186
Sau96I GGNCC 2 cut(s) 1163, 1211
SchI GAGTC 3 cut(s) 145, 548, 962
ScrFI CCNGG 2 cut(s) 631, 973
SfaNI GCATC 9 cut(s) 133, 539, 700, 718, 852, 1045, 1081, 1115, 1276
SfcI CTRYAG 1 cut(s) 1353
Sfr274I CTCGAG 1 cut(s) 153
SfuI TTCGAA 1 cut(s) 91
SinI GGWCC 1 cut(s) 1163
SlaI CTCGAG 1 cut(s) 153
SmiMI CAYNNNNRTG 3 cut(s) 780, 1085, 1521
SmlI CTYRAG 2 cut(s) 153, 857
SmoI CTYRAG 2 cut(s) 153, 857
SphI GCATGC 2 cut(s) 678, 1349
SsiI CCGC 2 cut(s) 219, 1294
SspI AATATT 1 cut(s) 701
SspMI CTAG 1 cut(s) 1256
StyD4I CCNGG 2 cut(s) 629, 971
StyI CCWWGG 1 cut(s) 1120
TaaI ACNGT 5 cut(s) 101, 317, 779, 1354, 1392
TaiI ACGT 1 cut(s) 208
TaqI TCGA 3 cut(s) 91, 154, 1634
TatI WGTACW 3 cut(s) 79, 483, 1321
TauI GCSGC 1 cut(s) 221
TfiI GAWTC 3 cut(s) 274, 950, 1493
Tru1I TTAA 6 cut(s) 255, 450, 1131, 1403, 1449, 1602
Tru9I TTAA 6 cut(s) 255, 450, 1131, 1403, 1449, 1602
TscAI CASTG 3 cut(s) 357, 1240, 1395
TseI GCWGC 2 cut(s) 19, 1238
TspDTI ATGAA 9 cut(s) 48, 203, 287, 413, 1278, 1304, 1451, 1505, 1574
TspGWI ACGGA 3 cut(s) 561, 971, 1034
TspRI CASTG 3 cut(s) 357, 1240, 1395
VpaK11BI GGWCC 1 cut(s) 1163
XapI RAATTY 7 cut(s) 209, 435, 446, 722, 801, 1310, 1552
XceI RCATGY 3 cut(s) 678, 773, 1349
XhoI CTCGAG 1 cut(s) 153
XmnI GAANNNNTTC 3 cut(s) 109, 805, 887
XspI CTAG 1 cut(s) 1256
Zsp2I ATGCAT 1 cut(s) 1096
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.