Prupe.1G134600_v2.0.a1

Chaperone protein DNAj

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0010192
Physical Location & Seq
Reverse (-)
10634322 .. 10637247
2926 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G134600.2

Sequence Viewer

Length: 1053 bp
ATGGATGGTAACAAGGATGAAGCTTTGAAATGCGTTCGCATTGCTGAAGAAGCAATTGCGTCCGGTAACAAAGGGCGTGCGCTCAAATTTATCAAAATAGCGCGACGCCTTAATCAGAGTTTGCAAGTTAATGAACTTTTGGCTGCGTGTGAGAAGATCGATTCGGGGTCTCCTGCATCTTCCATTGGTGAAAAGGGTGCTACTGAGATTAAGAATGAGCCTGGTGTGGAGAAATTGGGCCAAGGTTTGAATGGGGAAGTTAGTTATACCGAAGAGCATGTTCAGTTGATCAGGAAGATTAAGAGAAACAAAGACTATTATGCCATTCTTGGCGTGGAAAAGACTTGCTCAGTTGAGGACATTAGGAAGGCTTATAGGAAATTGTCATTGAAAGTTCATCCTGATAAGAACAAGGCTCCCGGTTCGGAAGAGGCATTTAAGATAGTAAGCAAGGCTTTCAAGTGTTTGAGTGATGGAGATTCAAGGAGGCAGTATGATCAGACTGGTTTGGTTGATGAATTTGAGTACAACCAGCAACACAATGTGAGGAGGAGGAGGAGGAGAGCTGGGCATGATTTGTTTGATGATGATTTCGACCCTGATGAGATATTTAGGGCGTTCTTTGGTCAATCAGACATGTTTCGGACAAGTCATGTTTATAGAACTAGTAGAACTGCTGGCCATCAGAGGGAGGAGGTTCAGGGAGGGGGACCTAATATCATGGTTCTTATTCAACTATTACCGTTCTTGGTAATTGTATTGCTGGCATATCTTCCCTTTTCAGAGCCTAACTACTCTTTGCAGAAGACTTACAACTACCAGATTCCCAAGACAACAGAGAAACATGGAGTGGAATTTTATGTTAAATCAGAAGCATTTGATGAAAATTATCCCCTTGGAAGTGTTGCTCGATCTAACATAGAGAACCATGTTATCAAGGATTACAAGAATGTGCTTCTACACTACTGTCGGGTTGAACTTCAAAGGCGTCACTGGAGTAAGAATCTGCCTACCCCTCACTGCGATAAGTTGAATAACCTTGGAGTAGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
DUF1977 DnaJ

Protein Analysis

351

Amino Acids

39.99

Weight (kDa)

8.81

Isoelectric Point (pI)

54.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 103
AcoI YGGCCR 1 cut(s) 679
AcsI RAATTY 3 cut(s) 86, 518, 854
AcuI CTGAAG 1 cut(s) 66
AcyI GRCGYC 2 cut(s) 106, 988
AdeI CACNNNGTG 1 cut(s) 544
AfaI GTAC 1 cut(s) 527
AfiI CCNNNNNNNGG 1 cut(s) 688
AflIII ACRYGT 1 cut(s) 636
AgsI TTSAA 9 cut(s) 28, 250, 391, 460, 483, 734, 977, 983, 1033
AhlI ACTAGT 1 cut(s) 665
AjnI CCWGG 1 cut(s) 220
AluBI AGCT 2 cut(s) 23, 566
AluI AGCT 2 cut(s) 23, 566
Alw26I GTCTC 1 cut(s) 174
AoxI GGCC 2 cut(s) 238, 679
ApeKI GCWGC 1 cut(s) 143
ApoI RAATTY 3 cut(s) 86, 518, 854
AspLEI GCGC 2 cut(s) 82, 103
AspS9I GGNCC 2 cut(s) 238, 710
AsuC2I CCSGG 1 cut(s) 420
AsuHPI GGTGA 1 cut(s) 200
AvaII GGWCC 1 cut(s) 710
BalI TGGCCA 1 cut(s) 681
BbsI GAAGAC 1 cut(s) 812
BbvI GCAGC 1 cut(s) 130
BccI CCATC 2 cut(s) 467, 690
BciT130I CCWGG 1 cut(s) 222
BclI TGATCA 2 cut(s) 288, 496
BcnI CCSGG 1 cut(s) 420
BcoDI GTCTC 1 cut(s) 174
BcuI ACTAGT 1 cut(s) 665
BfaI CTAG 1 cut(s) 666
BisI GCNGC 1 cut(s) 144
BlsI GCNGC 1 cut(s) 145
Bme1390I CCNGG 2 cut(s) 222, 420
Bme18I GGWCC 1 cut(s) 710
BmgT120I GGNCC 2 cut(s) 238, 710
BmiI GGNNCC 2 cut(s) 417, 711
BmrFI CCNGG 2 cut(s) 222, 420
BmsI GCATC 1 cut(s) 185
BpiI GAAGAC 1 cut(s) 812
BpmI CTGGAG 1 cut(s) 1015
BpuMI CCSGG 1 cut(s) 420
Bsa29I ATCGAT 1 cut(s) 159
BsaHI GRCGYC 2 cut(s) 106, 988
BsaI GGTCTC 1 cut(s) 174
BsaJI CCNNGG 3 cut(s) 241, 895, 1039
BsaWI WCCGGW 1 cut(s) 62
Bsc4I CCNNNNNNNGG 1 cut(s) 688
Bse1I ACTGG 2 cut(s) 508, 998
Bse3DI GCAATG 1 cut(s) 39
BseBI CCWGG 1 cut(s) 222
BseCI ATCGAT 1 cut(s) 159
BseDI CCNNGG 3 cut(s) 241, 895, 1039
BseGI GGATG 3 cut(s) 10, 22, 397
BseLI CCNNNNNNNGG 1 cut(s) 688
BseMI GCAATG 1 cut(s) 39
BseMII CTCAG 2 cut(s) 195, 363
BseNI ACTGG 2 cut(s) 508, 998
BseRI GAGGAG 6 cut(s) 562, 565, 568, 571, 574, 707
BseXI GCAGC 1 cut(s) 130
BseYI CCCAGC 1 cut(s) 566
Bsh1236I CGCG 1 cut(s) 103
BshFI GGCC 2 cut(s) 240, 681
BshVI ATCGAT 1 cut(s) 159
BsiSI CCGG 2 cut(s) 63, 420
BslFI GGGAC 1 cut(s) 723
BslI CCNNNNNNNGG 1 cut(s) 688
BsmAI GTCTC 1 cut(s) 174
BsmFI GGGAC 1 cut(s) 723
BsnI GGCC 2 cut(s) 240, 681
Bso31I GGTCTC 1 cut(s) 174
Bsp143I GATC 4 cut(s) 156, 288, 496, 911
BspANI GGCC 2 cut(s) 240, 681
BspCNI CTCAG 2 cut(s) 196, 362
BspDI ATCGAT 1 cut(s) 159
BspFNI CGCG 1 cut(s) 103
BspLI GGNNCC 2 cut(s) 417, 711
BspQI GCTCTTC 1 cut(s) 267
BspTNI GGTCTC 1 cut(s) 174
BsrDI GCAATG 1 cut(s) 39
BsrI ACTGG 2 cut(s) 508, 998
BssECI CCNNGG 3 cut(s) 241, 895, 1039
BssMI GATC 4 cut(s) 156, 288, 496, 911
BssNI GRCGYC 2 cut(s) 106, 988
BssT1I CCWWGG 3 cut(s) 241, 895, 1039
Bst2UI CCWGG 1 cut(s) 222
Bst4CI ACNGT 2 cut(s) 744, 968
Bst6I CTCTTC 2 cut(s) 267, 423
BstACI GRCGYC 2 cut(s) 106, 988
BstC8I GCNNGC 3 cut(s) 78, 679, 765
BstDEI CTNAG 2 cut(s) 204, 349
BstF5I GGATG 3 cut(s) 10, 22, 397
BstFNI CGCG 1 cut(s) 103
BstHHI GCGC 2 cut(s) 82, 103
BstKTI GATC 4 cut(s) 159, 291, 499, 914
BstMAI GTCTC 1 cut(s) 174
BstMBI GATC 4 cut(s) 156, 288, 496, 911
BstMWI GCNNNNNNNGC 1 cut(s) 50
BstNI CCWGG 1 cut(s) 222
BstNSI RCATGY 2 cut(s) 281, 640
BstSCI CCNGG 2 cut(s) 220, 418
BstUI CGCG 1 cut(s) 103
BstV1I GCAGC 1 cut(s) 130
BstV2I GAAGAC 1 cut(s) 812
Bsu15I ATCGAT 1 cut(s) 159
BsuRI GGCC 2 cut(s) 240, 681
BsuTUI ATCGAT 1 cut(s) 159
BtsCI GGATG 3 cut(s) 10, 22, 397
BtsI GCAGTG 1 cut(s) 1018
BtsIMutI CAGTG 2 cut(s) 991, 1018
Cac8I GCNNGC 3 cut(s) 78, 679, 765
CfoI GCGC 2 cut(s) 82, 103
Cfr13I GGNCC 2 cut(s) 238, 710
ClaI ATCGAT 1 cut(s) 159
CseI GACGC 3 cut(s) 48, 114, 977
Csp6I GTAC 1 cut(s) 526
CviAII CATG 7 cut(s) 278, 572, 637, 653, 721, 845, 929
CviQI GTAC 1 cut(s) 526
DdeI CTNAG 2 cut(s) 204, 349
DpnI GATC 4 cut(s) 158, 290, 498, 913
DpnII GATC 4 cut(s) 156, 288, 496, 911
DraIII CACNNNGTG 1 cut(s) 544
EaeI YGGCCR 1 cut(s) 679
Eam1104I CTCTTC 2 cut(s) 267, 423
EarI CTCTTC 2 cut(s) 267, 423
Eco130I CCWWGG 3 cut(s) 241, 895, 1039
Eco31I GGTCTC 1 cut(s) 174
Eco47I GGWCC 1 cut(s) 710
Eco57I CTGAAG 1 cut(s) 66
EcoO109I RGGNCCY 1 cut(s) 710
EcoRII CCWGG 1 cut(s) 220
EcoT14I CCWWGG 3 cut(s) 241, 895, 1039
ErhI CCWWGG 3 cut(s) 241, 895, 1039
FaeI CATG 7 cut(s) 281, 575, 640, 656, 724, 848, 932
FalI AAGNNNNNCTT 2 cut(s) 439, 471
FaqI GGGAC 1 cut(s) 723
FatI CATG 7 cut(s) 277, 571, 636, 652, 720, 844, 928
FbaI TGATCA 2 cut(s) 288, 496
Fnu4HI GCNGC 1 cut(s) 144
FokI GGATG 3 cut(s) 17, 29, 384
Fsp4HI GCNGC 1 cut(s) 144
FspBI CTAG 1 cut(s) 666
GlaI GCGC 2 cut(s) 81, 102
GluI GCNGC 1 cut(s) 144
GsaI CCCAGC 1 cut(s) 570
GsuI CTGGAG 1 cut(s) 1015
HaeIII GGCC 2 cut(s) 240, 681
HapII CCGG 2 cut(s) 63, 420
HgaI GACGC 3 cut(s) 48, 114, 977
HhaI GCGC 2 cut(s) 82, 103
Hin1I GRCGYC 2 cut(s) 106, 988
Hin1II CATG 7 cut(s) 281, 575, 640, 656, 724, 848, 932
Hin6I GCGC 2 cut(s) 80, 101
HinP1I GCGC 2 cut(s) 80, 101
HindIII AAGCTT 1 cut(s) 21
HinfI GANTC 4 cut(s) 161, 479, 823, 1003
HpaII CCGG 2 cut(s) 63, 420
HphI GGTGA 1 cut(s) 200
Hpy188I TCNGA 8 cut(s) 117, 427, 501, 634, 645, 687, 784, 871
Hpy188III TCNNGA 2 cut(s) 292, 401
Hpy99I CGWCG 1 cut(s) 108
HpyAV CCTTC 1 cut(s) 361
HpyCH4III ACNGT 2 cut(s) 744, 968
HpyCH4V TGCA 3 cut(s) 124, 176, 802
HpyF10VI GCNNNNNNNGC 1 cut(s) 50
HpyF3I CTNAG 2 cut(s) 204, 349
Hsp92I GRCGYC 2 cut(s) 106, 988
Hsp92II CATG 7 cut(s) 281, 575, 640, 656, 724, 848, 932
HspAI GCGC 2 cut(s) 80, 101
Ksp22I TGATCA 2 cut(s) 288, 496
Kzo9I GATC 4 cut(s) 156, 288, 496, 911
LguI GCTCTTC 1 cut(s) 267
LmnI GCTCC 1 cut(s) 421
Lsp1109I GCAGC 1 cut(s) 130
LweI GCATC 1 cut(s) 185
MaeI CTAG 1 cut(s) 666
MaeIII GTNAC 3 cut(s) 8, 65, 989
MalI GATC 4 cut(s) 158, 290, 498, 913
MboI GATC 4 cut(s) 156, 288, 496, 911
MboII GAAGA 8 cut(s) 59, 166, 171, 284, 307, 440, 764, 817
MfeI CAATTG 1 cut(s) 54
MlsI TGGCCA 1 cut(s) 681
MluCI AATT 8 cut(s) 54, 86, 233, 380, 518, 753, 854, 886
MluNI TGGCCA 1 cut(s) 681
Mox20I TGGCCA 1 cut(s) 681
MscI TGGCCA 1 cut(s) 681
MseI TTAA 6 cut(s) 111, 129, 210, 300, 438, 864
Msp20I TGGCCA 1 cut(s) 681
MspI CCGG 2 cut(s) 63, 420
MspR9I CCNGG 2 cut(s) 222, 420
MunI CAATTG 1 cut(s) 54
MvaI CCWGG 1 cut(s) 222
MvnI CGCG 1 cut(s) 103
MwoI GCNNNNNNNGC 1 cut(s) 50
NciI CCSGG 1 cut(s) 420
NdeII GATC 4 cut(s) 156, 288, 496, 911
NlaIII CATG 7 cut(s) 281, 575, 640, 656, 724, 848, 932
NlaIV GGNNCC 2 cut(s) 417, 711
NmuCI GTSAC 1 cut(s) 989
NspI RCATGY 2 cut(s) 281, 640
PciI ACATGT 1 cut(s) 636
PciSI GCTCTTC 1 cut(s) 267
PfeI GAWTC 4 cut(s) 161, 479, 823, 1003
PkrI GCNGC 1 cut(s) 145
PpuMI RGGWCCY 1 cut(s) 710
PscI ACATGT 1 cut(s) 636
Psp5II RGGWCCY 1 cut(s) 710
Psp6I CCWGG 1 cut(s) 220
PspFI CCCAGC 1 cut(s) 566
PspGI CCWGG 1 cut(s) 220
PspN4I GGNNCC 2 cut(s) 417, 711
PspPI GGNCC 2 cut(s) 238, 710
PspPPI RGGWCCY 1 cut(s) 710
RsaI GTAC 1 cut(s) 527
RsaNI GTAC 1 cut(s) 526
SapI GCTCTTC 1 cut(s) 267
SaqAI TTAA 6 cut(s) 111, 129, 210, 300, 438, 864
SatI GCNGC 1 cut(s) 144
Sau3AI GATC 4 cut(s) 156, 288, 496, 911
Sau96I GGNCC 2 cut(s) 238, 710
ScrFI CCNGG 2 cut(s) 222, 420
SetI ASST 6 cut(s) 25, 247, 568, 699, 715, 1041
SfaNI GCATC 1 cut(s) 185
SinI GGWCC 1 cut(s) 710
SpeI ACTAGT 1 cut(s) 665
Sse9I AATT 8 cut(s) 54, 86, 233, 380, 518, 753, 854, 886
SspMI CTAG 1 cut(s) 666
StyD4I CCNGG 2 cut(s) 220, 418
StyI CCWWGG 3 cut(s) 241, 895, 1039
TaaI ACNGT 2 cut(s) 744, 968
TaqI TCGA 3 cut(s) 159, 594, 910
TasI AATT 8 cut(s) 54, 86, 233, 380, 518, 753, 854, 886
TatI WGTACW 1 cut(s) 525
TfiI GAWTC 4 cut(s) 161, 479, 823, 1003
Tru1I TTAA 6 cut(s) 111, 129, 210, 300, 438, 864
Tru9I TTAA 6 cut(s) 111, 129, 210, 300, 438, 864
TscAI CASTG 2 cut(s) 998, 1025
TseFI GTSAC 1 cut(s) 989
TseI GCWGC 1 cut(s) 143
Tsp45I GTSAC 1 cut(s) 989
TspDTI ATGAA 5 cut(s) 33, 147, 386, 531, 897
TspRI CASTG 2 cut(s) 998, 1025
VpaK11BI GGWCC 1 cut(s) 710
XapI RAATTY 3 cut(s) 86, 518, 854
XceI RCATGY 2 cut(s) 281, 640
XcmI CCANNNNNNNNNTGG 2 cut(s) 248, 331
XspI CTAG 1 cut(s) 666
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.