Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0007097

Physical Location & Seq

Genomic Coordinates Forward (+)

11967937 .. 11971616

Gene Structure 3680 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G151700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1647 bp

ATGAGTAAAGAAGAGTTCTTGAAGATCCAGAAATGTGTTCTCAAAGTGAACATACACTGTGATGGTTGCAAGCAGAAAGTGAAGAAAATCTTACAGAAAATTGATGGAGTTTTCACCACCGACATAGATGCAGAGCAGGGGAAGGTGACTGTCTCAGGAAATGTAGACCCTTCCATTCTCATTAAGAAGCTTGCAAAATCTGGCAAACATGCAGAGCTCTGGGGTGCTCCAAAGGCTAATAACAACAACAACCAGAGCCACATGGCCAATCAGCTCAAAAACATGCAAATCGACAATGGCAAAGGTGGAAACAACAAAGCCCAGAAGGGTGGTGGTGGAAACAACCAGCCCAAGGGTGGTGGTGGCAACAACCAGCCCAAGGGTGGTCAACCAGGCCAACAACAGCAGCAGCAACAGCAGCAACTTCAGCAACAGCAGCAACTTCAGCAGCAGCAGCAGCAGCAACATCTTCAGCAACTTAAGCAGCTTCAGCAGCTTCAGCAAATGAAAGGGTTCCAAGATCTGAACCTCCCCCAATTGAAGGGCATGCAAATGCCTCCTTTCAAGGGCCCAGACCCAAACCCCAACCAGAAGGCTGTGAAATTCAACTTGCGTGAGGATGAGGATTTGAGTGATGATGATTATGATGACCTTGATGATGAGGACTATGATGATGAGGACTATGATGATGAGTTTGATGATGACATGGATGACCCCCATCATCCTCTCAATAAGATGAAACCTGTGATGGGTAATGGTAAGGTGCCTAATATGATGGCGATGATGAATGGGAACCTTCCACAGATGATGAATATGAATGCTGCCCAAAAGGGTGGGAATGGTGGTCAAAATGGAGGTGGCGGTGGGGGTGGGGGTGGGGGTAATGGGAAAAAGGGTGGTGGTGGGCCTGTGCCTGTTCAGGTGAATATGGGTGGTGGGAACAATGAGGGTAAAAATGGAGGAGGAAAGAAGGGTGGTGGTGGAGGAGATCACAATCAAAATCAAGGTGGTGGAGGTGGAAAAAATGGAGGCAAAAATGGGGGATTTCCCTCAGATGGTAAAAATGGTGGTGGAGCAATTAACAAGGGTGGTCCTAATGCAAACATCAATAACGCCAATGGGGGCAAAAAGGGGGGCGGTGGAGGCGGAGGCGGTGGCGGTGGAGGAATGAGTGAAGCTCAAGCTATGAGCAATGCTTTTCACAGCATGGGTGGGCGCCCCCAGGGCATGCCTGGAGGAGGTAATATGGGTCAGGTGGCCAACATGAACAACATGGCAATGGGGCCAATGGGTGGCATGCCAATGAGCCAAATGGGCAACATTCCAGCTGTTCAAGGCCTGCCGGCAGCACCGATGAATGGTGGCGGTGGCGGAGGCGGGGCCGGCTACTTCCAAGGAGCTGGGCCCGAGGCCATGCCTGGAAACCCCTTCCAGCAACAACAATACTTGCAAGCTGTGATGAACCAGCAAAGGGCAATGGGCAATGAGAGGTTTTCGCCTATGGTGTATGCTAGGCCTCCACCAGCTGTGAATTACATGCCAGCTGGCCCACCACCCCCATACTATCCATACCCTCCTCCTCCACCAGCTGGTGAATACACTCACTTCTTTAGTGATGAGAACACCTCAAGTTGCAATGTGATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HMA

Protein Analysis

549

Amino Acids

57.02

Weight (kDa)

7.64

Isoelectric Point (pI)

58.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007097)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06130 AT3G06130 AT5G19090 AT5G19090 AT5G19090 AT5G19090 AT5G19090
fragaria_vesca	FvH4_4g14520 FvH4_4g14520 FvH4_4g14520
malus_domestica	MD16G1184300.v1.1
prunus_persica	Prupe.1G151700_v2.0.a1 Prupe.1G151700_v2.0.a1
pyrus_communis	pycom13g15870
rosa_chinensis	RchiOBHm_Chr4g0418311
rosa_laevigata	RLG00000007878
rosa_multiflora	Rmu_ssc0000153.1_g000003
rosa_roxburghii	Rroxscaffold_5G00361490
rosa_rugosa	Rorug04G0152000 Rorug04G0152100
rosa_samantha	Rh4AG213500 Rh4BG216800 Rh4CG225200 Rh4DG212100
rosa_wichuraiana	Rw4G018140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	763, 1215
AccB7I	CCANNNNNTGG	2 cut(s)	1292, 1589
AccI	GTMKAC	1 cut(s)	165
AciI	CCGC	8 cut(s)	861, 1137, 1146, 1152, 1158, 1365, 1371, 1377
AclWI	GGATC	1 cut(s)	19
AcoI	YGGCCR	2 cut(s)	264, 1257
AcsI	RAATTY	1 cut(s)	602
AcuI	CTGAAG	5 cut(s)	410, 428, 455, 473, 482
AcyI	GRCGYC	1 cut(s)	1216
AflII	CTTAAG	1 cut(s)	479
AgsI	TTSAA	5 cut(s)	22, 541, 565, 607, 1334
AjnI	CCWGG	4 cut(s)	391, 1221, 1231, 1417
Alw21I	GWGCWC	2 cut(s)	219, 229
Alw26I	GTCTC	1 cut(s)	157
AlwI	GGATC	1 cut(s)	19
Ama87I	CYCGRG	1 cut(s)	1406
ApaI	GGGCCC	2 cut(s)	572, 1407
ApoI	RAATTY	1 cut(s)	602
Asp700I	GAANNNNTTC	1 cut(s)	512
AspLEI	GCGC	1 cut(s)	1218
AspS9I	GGNCC	9 cut(s)	568, 569, 905, 1091, 1283, 1380, 1403, 1404, 1547
AsuHPI	GGTGA	4 cut(s)	106, 157, 934, 1604
AvaI	CYCGRG	1 cut(s)	1406
AvaII	GGWCC	1 cut(s)	1091
BaeGI	GKGCMC	2 cut(s)	572, 1407
BalI	TGGCCA	2 cut(s)	266, 1259
BanI	GGYRCC	2 cut(s)	763, 1215
BanII	GRGCYC	3 cut(s)	219, 572, 1407
Bbv12I	GWGCWC	2 cut(s)	219, 229
BccI	CCATC	6 cut(s)	56, 98, 726, 742, 769, 1049
BcgI	CGANNNNNNTGC	2 cut(s)	110, 144
BciT130I	CCWGG	4 cut(s)	393, 1223, 1233, 1419
BcoDI	GTCTC	1 cut(s)	157
BfaI	CTAG	1 cut(s)	1512
BfoI	RGCGCY	1 cut(s)	1219
BfrI	CTTAAG	1 cut(s)	479
BglI	GCCNNNNNGGC	2 cut(s)	1224, 1314
BglII	AGATCT	1 cut(s)	520
Bme1390I	CCNGG	4 cut(s)	393, 1223, 1233, 1419
Bme18I	GGWCC	1 cut(s)	1091
BmeT110I	CYCGRG	1 cut(s)	1406
BmgT120I	GGNCC	9 cut(s)	568, 569, 905, 1091, 1283, 1380, 1403, 1404, 1547
BmiI	GGNNCC	8 cut(s)	515, 570, 765, 794, 1217, 1284, 1381, 1405
BmrFI	CCNGG	4 cut(s)	393, 1223, 1233, 1419
BmsI	GCATC	1 cut(s)	118
BplI	GAGNNNNNCTC	4 cut(s)	1162, 1194, 1610, 1642
BpmI	CTGGAG	1 cut(s)	1254
BpuEI	CTTGAG	2 cut(s)	1164, 1612
BsaBI	GATNNNNATC	1 cut(s)	993
BsaHI	GRCGYC	1 cut(s)	1216
BsaJI	CCNNGG	6 cut(s)	351, 378, 1221, 1222, 1393, 1407
Bse118I	RCCGGY	2 cut(s)	1342, 1382
Bse3DI	GCAATG	5 cut(s)	1198, 1284, 1482, 1489, 1642
Bse8I	GATNNNNATC	1 cut(s)	993
BseBI	CCWGG	4 cut(s)	393, 1223, 1233, 1419
BseDI	CCNNGG	6 cut(s)	351, 378, 1221, 1222, 1393, 1407
BseGI	GGATG	3 cut(s)	625, 715, 721
BseJI	GATNNNNATC	1 cut(s)	993
BseMI	GCAATG	5 cut(s)	1198, 1284, 1482, 1489, 1642
BseMII	CTCAG	2 cut(s)	168, 1065
BseRI	GAGGAG	5 cut(s)	975, 999, 1251, 1566, 1569
BseSI	GKGCMC	2 cut(s)	572, 1407
BseYI	CCCAGC	1 cut(s)	1400
BshNI	GGYRCC	2 cut(s)	763, 1215
BsiHKAI	GWGCWC	2 cut(s)	219, 229
BsiHKCI	CYCGRG	1 cut(s)	1406
BsiSI	CCGG	2 cut(s)	1343, 1383
BsmAI	GTCTC	1 cut(s)	157
BsmI	GAATGC	1 cut(s)	823
BsoBI	CYCGRG	1 cut(s)	1406
Bsp120I	GGGCCC	2 cut(s)	568, 1403
Bsp1286I	GDGCHC	4 cut(s)	219, 229, 572, 1407
Bsp143I	GATC	3 cut(s)	24, 520, 988
BspACI	CCGC	8 cut(s)	861, 1137, 1146, 1152, 1158, 1365, 1371, 1377
BspCNI	CTCAG	2 cut(s)	167, 1064
BspLI	GGNNCC	8 cut(s)	515, 570, 765, 794, 1217, 1284, 1381, 1405
BspPI	GGATC	1 cut(s)	19
BspT107I	GGYRCC	2 cut(s)	763, 1215
BspTI	CTTAAG	1 cut(s)	479
BsrDI	GCAATG	5 cut(s)	1198, 1284, 1482, 1489, 1642
BsrFI	RCCGGY	2 cut(s)	1342, 1382
BssAI	RCCGGY	2 cut(s)	1342, 1382
BssECI	CCNNGG	6 cut(s)	351, 378, 1221, 1222, 1393, 1407
BssMI	GATC	3 cut(s)	24, 520, 988
BssNI	GRCGYC	1 cut(s)	1216
BssT1I	CCWWGG	3 cut(s)	351, 378, 1393
Bst2UI	CCWGG	4 cut(s)	393, 1223, 1233, 1419
Bst4CI	ACNGT	2 cut(s)	59, 151
Bst6I	CTCTTC	1 cut(s)	6
BstACI	GRCGYC	1 cut(s)	1216
BstAFI	CTTAAG	1 cut(s)	479
BstDEI	CTNAG	2 cut(s)	154, 1051
BstENI	CCTNNNNNAGG	1 cut(s)	1236
BstF5I	GGATG	3 cut(s)	625, 715, 721
BstH2I	RGCGCY	1 cut(s)	1219
BstHHI	GCGC	1 cut(s)	1218
BstKTI	GATC	3 cut(s)	27, 523, 991
BstMAI	GTCTC	1 cut(s)	157
BstMBI	GATC	3 cut(s)	24, 520, 988
BstNI	CCWGG	4 cut(s)	393, 1223, 1233, 1419
BstNSI	RCATGY	6 cut(s)	212, 286, 550, 1231, 1300, 1540
BstSCI	CCNGG	4 cut(s)	391, 1221, 1231, 1417
BstSLI	GKGCMC	2 cut(s)	572, 1407
BstX2I	RGATCY	2 cut(s)	24, 520
BstXI	CCANNNNNNTGG	3 cut(s)	329, 833, 1400
BstYI	RGATCY	2 cut(s)	24, 520
BtgZI	GCGATG	1 cut(s)	794
BtsCI	GGATG	3 cut(s)	625, 715, 721
BtsIMutI	CAGTG	1 cut(s)	55
CfoI	GCGC	1 cut(s)	1218
Cfr10I	RCCGGY	2 cut(s)	1342, 1382
Cfr13I	GGNCC	9 cut(s)	568, 569, 905, 1091, 1283, 1380, 1403, 1404, 1547
CspCI	CAANNNNNGTGG	2 cut(s)	340, 375
DdeI	CTNAG	2 cut(s)	154, 1051
DinI	GGCGCC	1 cut(s)	1217
DpnI	GATC	3 cut(s)	26, 522, 990
DpnII	GATC	3 cut(s)	24, 520, 988
EaeI	YGGCCR	2 cut(s)	264, 1257
Eam1104I	CTCTTC	1 cut(s)	6
EarI	CTCTTC	1 cut(s)	6
EciI	GGCGGA	2 cut(s)	1161, 1386
Ecl136II	GAGCTC	1 cut(s)	217
Eco130I	CCWWGG	3 cut(s)	351, 378, 1393
Eco147I	AGGCCT	2 cut(s)	1338, 1516
Eco24I	GRGCYC	3 cut(s)	219, 572, 1407
Eco47I	GGWCC	1 cut(s)	1091
Eco53kI	GAGCTC	1 cut(s)	217
Eco57I	CTGAAG	5 cut(s)	410, 428, 455, 473, 482
Eco88I	CYCGRG	1 cut(s)	1406
EcoICRI	GAGCTC	1 cut(s)	217
EcoNI	CCTNNNNNAGG	1 cut(s)	1236
EcoO109I	RGGNCCY	1 cut(s)	568
EcoRII	CCWGG	4 cut(s)	391, 1221, 1231, 1417
EcoT14I	CCWWGG	3 cut(s)	351, 378, 1393
EcoT38I	GRGCYC	3 cut(s)	219, 572, 1407
EgeI	GGCGCC	1 cut(s)	1217
EheI	GGCGCC	1 cut(s)	1217
ErhI	CCWWGG	3 cut(s)	351, 378, 1393
FalI	AAGNNNNNCTT	2 cut(s)	74, 106
FauI	CCCGC	1 cut(s)	1370
FblI	GTMKAC	1 cut(s)	165
FokI	GGATG	3 cut(s)	632, 708, 722
FriOI	GRGCYC	3 cut(s)	219, 572, 1407
FspBI	CTAG	1 cut(s)	1512
GlaI	GCGC	1 cut(s)	1217
GsaI	CCCAGC	1 cut(s)	1404
GsuI	CTGGAG	1 cut(s)	1254
HaeII	RGCGCY	1 cut(s)	1219
HapII	CCGG	2 cut(s)	1343, 1383
HhaI	GCGC	1 cut(s)	1218
Hin1I	GRCGYC	1 cut(s)	1216
Hin6I	GCGC	1 cut(s)	1216
HinP1I	GCGC	1 cut(s)	1216
HincII	GTYRAC	1 cut(s)	389
HindII	GTYRAC	1 cut(s)	389
HindIII	AAGCTT	1 cut(s)	188
HpaII	CCGG	2 cut(s)	1343, 1383
HphI	GGTGA	4 cut(s)	106, 157, 934, 1604
Hpy166II	GTNNAC	3 cut(s)	49, 166, 389
Hpy188I	TCNGA	2 cut(s)	525, 1054
Hpy188III	TCNNGA	3 cut(s)	19, 28, 156
Hpy8I	GTNNAC	3 cut(s)	49, 166, 389
HpyAV	CCTTC	8 cut(s)	136, 180, 319, 535, 586, 806, 964, 1438
HpyCH4III	ACNGT	2 cut(s)	59, 151
HpyCH4V	TGCA	9 cut(s)	69, 131, 194, 212, 286, 550, 1100, 1450, 1635
HpyF3I	CTNAG	2 cut(s)	154, 1051
Hsp92I	GRCGYC	1 cut(s)	1216
HspAI	GCGC	1 cut(s)	1216
KasI	GGCGCC	1 cut(s)	1215
KroI	GCCGGC	2 cut(s)	1342, 1382
KroNI	GCCGGC	2 cut(s)	1344, 1384
Kzo9I	GATC	3 cut(s)	24, 520, 988
LmnI	GCTCC	3 cut(s)	232, 1073, 1397
LweI	GCATC	1 cut(s)	118
MaeI	CTAG	1 cut(s)	1512
MaeIII	GTNAC	1 cut(s)	145
MalI	GATC	3 cut(s)	26, 522, 990
MboI	GATC	3 cut(s)	24, 520, 988
MboII	GAAGA	4 cut(s)	23, 34, 94, 461
MfeI	CAATTG	1 cut(s)	536
MflI	RGATCY	2 cut(s)	24, 520
MhlI	GDGCHC	4 cut(s)	219, 229, 572, 1407
MlsI	TGGCCA	2 cut(s)	266, 1259
MluCI	AATT	5 cut(s)	99, 536, 602, 1077, 1531
MluNI	TGGCCA	2 cut(s)	266, 1259
Mly113I	GGCGCC	1 cut(s)	1216
Mox20I	TGGCCA	2 cut(s)	266, 1259
MroNI	GCCGGC	2 cut(s)	1342, 1382
MroXI	GAANNNNTTC	1 cut(s)	512
MscI	TGGCCA	2 cut(s)	266, 1259
MseI	TTAA	3 cut(s)	183, 480, 1080
MslI	CAYNNNNRTG	4 cut(s)	60, 551, 1277, 1301
Msp20I	TGGCCA	2 cut(s)	266, 1259
MspA1I	CMGCKG	4 cut(s)	1328, 1526, 1544, 1589
MspCI	CTTAAG	1 cut(s)	479
MspI	CCGG	2 cut(s)	1343, 1383
MspR9I	CCNGG	4 cut(s)	393, 1223, 1233, 1419
MunI	CAATTG	1 cut(s)	536
Mva1269I	GAATGC	1 cut(s)	823
MvaI	CCWGG	4 cut(s)	393, 1223, 1233, 1419
NaeI	GCCGGC	2 cut(s)	1344, 1384
NarI	GGCGCC	1 cut(s)	1216
NdeII	GATC	3 cut(s)	24, 520, 988
NgoMIV	GCCGGC	2 cut(s)	1342, 1382
NlaIV	GGNNCC	8 cut(s)	515, 570, 765, 794, 1217, 1284, 1381, 1405
NmuCI	GTSAC	1 cut(s)	145
NspI	RCATGY	6 cut(s)	212, 286, 550, 1231, 1300, 1540
PaeI	GCATGC	3 cut(s)	550, 1231, 1300
PasI	CCCWGGG	1 cut(s)	1222
PceI	AGGCCT	2 cut(s)	1338, 1516
PctI	GAATGC	1 cut(s)	823
PdiI	GCCGGC	2 cut(s)	1344, 1384
PdmI	GAANNNNTTC	1 cut(s)	512
PflMI	CCANNNNNTGG	2 cut(s)	1292, 1589
PluTI	GGCGCC	1 cut(s)	1219
Psp124BI	GAGCTC	1 cut(s)	219
Psp6I	CCWGG	4 cut(s)	391, 1221, 1231, 1417
PspFI	CCCAGC	1 cut(s)	1400
PspGI	CCWGG	4 cut(s)	391, 1221, 1231, 1417
PspN4I	GGNNCC	8 cut(s)	515, 570, 765, 794, 1217, 1284, 1381, 1405
PspOMI	GGGCCC	2 cut(s)	568, 1403
PspPI	GGNCC	9 cut(s)	568, 569, 905, 1091, 1283, 1380, 1403, 1404, 1547
PsuI	RGATCY	2 cut(s)	24, 520
PvuII	CAGCTG	4 cut(s)	1328, 1526, 1544, 1589
RseI	CAYNNNNRTG	4 cut(s)	60, 551, 1277, 1301
SacI	GAGCTC	1 cut(s)	219
SaqAI	TTAA	3 cut(s)	183, 480, 1080
Sau3AI	GATC	3 cut(s)	24, 520, 988
Sau96I	GGNCC	9 cut(s)	568, 569, 905, 1091, 1283, 1380, 1403, 1404, 1547
ScrFI	CCNGG	4 cut(s)	393, 1223, 1233, 1419
SduI	GDGCHC	4 cut(s)	219, 229, 572, 1407
SfaNI	GCATC	1 cut(s)	118
SfoI	GGCGCC	1 cut(s)	1217
SinI	GGWCC	1 cut(s)	1091
SmiMI	CAYNNNNRTG	4 cut(s)	60, 551, 1277, 1301
SmlI	CTYRAG	3 cut(s)	479, 1179, 1627
SmoI	CTYRAG	3 cut(s)	479, 1179, 1627
SphI	GCATGC	3 cut(s)	550, 1231, 1300
Sse9I	AATT	5 cut(s)	99, 536, 602, 1077, 1531
SseBI	AGGCCT	2 cut(s)	1338, 1516
SsiI	CCGC	8 cut(s)	861, 1137, 1146, 1152, 1158, 1365, 1371, 1377
SspDI	GGCGCC	1 cut(s)	1215
SspMI	CTAG	1 cut(s)	1512
SstI	GAGCTC	1 cut(s)	219
StuI	AGGCCT	2 cut(s)	1338, 1516
StyD4I	CCNGG	4 cut(s)	391, 1221, 1231, 1417
StyI	CCWWGG	3 cut(s)	351, 378, 1393
TaaI	ACNGT	2 cut(s)	59, 151
TaqI	TCGA	1 cut(s)	291
TasI	AATT	5 cut(s)	99, 536, 602, 1077, 1531
Tru1I	TTAA	3 cut(s)	183, 480, 1080
Tru9I	TTAA	3 cut(s)	183, 480, 1080
TscAI	CASTG	1 cut(s)	62
TseFI	GTSAC	1 cut(s)	145
Tsp45I	GTSAC	1 cut(s)	145
TspDTI	ATGAA	8 cut(s)	521, 752, 800, 824, 830, 1280, 1370, 1475
TspRI	CASTG	1 cut(s)	62
Van91I	CCANNNNNTGG	2 cut(s)	1292, 1589
Vha464I	CTTAAG	1 cut(s)	479
VpaK11BI	GGWCC	1 cut(s)	1091
XagI	CCTNNNNNAGG	1 cut(s)	1236
XapI	RAATTY	1 cut(s)	602
XceI	RCATGY	6 cut(s)	212, 286, 550, 1231, 1300, 1540
XcmI	CCANNNNNNNNNTGG	4 cut(s)	329, 353, 380, 1229
XmiI	GTMKAC	1 cut(s)	165
XmnI	GAANNNNTTC	1 cut(s)	512
XspI	CTAG	1 cut(s)	1512

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.