Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0006862

Physical Location & Seq

Genomic Coordinates Forward (+)

13717083 .. 13720199

Gene Structure 3117 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G168400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2733 bp

ATGGTTCTGCTGCTGCAAACCAGGCTGGCTTTCTTTCTAGCACTCTGTGTACTCTTCCTCAGCAGCAGCACAGCGGCAGACGACTCAGAAGTGATGTCGAAGCTTGCAGAAGGCCTCAAGAACACACCCGAAGACTGGTCAACAGGAAAAACCTACTGCGGCTGGGAGGGCATCAAATGTGACGGAAACAGAGTCACCTCCATCAACTTATCCTCCATGTCTCTCTCTGGCTCTCTCCCTTCAAATCTCAACTCTCTCACTCAGCTCACCACCCTCTCACTCCAAAGCAACTCTCTTTCTGGCCCCTTTCCTTCTTTAGCCAACCTCTCTTTGCTCCAAGAAATCTATCTTGACACCAACAATTTCACTTCCATTCCTTCTGGGTGTTTTCAAGGCCTCTCAAGCTTGCAGGTTTTGAGCATGAGCCAAAACATCAATCTTGTTCCATGGGTTTTGCCAAATGAGCTCACTCAAGCTTCAAGCTTGGTCACTTTAGATGCAGATAATGCAAACTTATATGGGTATTTGCCTGATATCTTTGATTCCTTTCCAAACTTGCAAAATCTGAGGCTTTCTTACAATAATTTTTCTGGGTTTTTGCCCAAAAGCTTTTCTGGATCTGGGATTCAAAACCTCGGGCTTAACAATCAGCAATTTGGGTTATCTGGTACGATTGAAGTTTTATCAAACATGACCCAGTTAAACCAGGTTTGGCTCCATAAGAACCAATTCACTGGTCCGATCCCAGACATCTCAAGGTGTAAAACTTTGTTTGATCTTCAGCTTCGTGATAACCTGTTAACTGGCATTGTGCCAGCCACATTGATGTCCTCAACTGCCATACTAAACGTTTCTTTGGACAATAACAAGCTGCAGGGTCCTCTGCCTGTGTTTGGGTCCATTGTGACCAAAGCCACATTTGATGGTACTAATAGCTTCTGCCAAACCAAACCAGGACCTTGTGATCCGCAGGTCAACACTCTGCTTGAAGTTGCAGGGGCTTTGGCGTACCCAATTTTGCTTGCTGAGTCTTGGGAAGGAAACAATGCTTGCGATAGATGGAGCTTCATTGTTTGTGATACGCAAGGAAAGGTTATCACTGTGAATTTTGAGAACAAGCATTTCACTGGGATCATTTCGCCTGCTTTTGCCAATTTGACATCTTTGAAAAATTTGGTGTTGAAGAATAACAATTTGACCGGGTCGATACCGGCTAGCTTGTTAACCTTGCAGCAGCTTCAGCTTCTTGATGTTTCCAATAACAATCTTTTTGGGGCAATTCCGAAATTCCCATATACGGTGAAGTTAATTACAACAGGCAATGTCTTGATTGAGACTACTCCGAGCTCTGGAGGTGGAGGAGGAGGAACTCCATCCGGGTCTGGTTCGAATGGAACTACACCCAATGGGAGTCCGAGTCCAGCTCCTGCTTCGGGTGATTCATCAGTGTCTCCTGGTATGATTGCTGGTATAGTTATTGCTGTTGTAATATTCATTGTGGTGATATTGTTTGTGTCCATCAAATGTTATGCTAGTAAAAAGCATGGGAAACTTGGAAGGGTCGATAACCCAATGAATGGTATCAAAATTGCTAAGAGTGATGTGATGAGTAGTGCAAATGGGTATAATGGAGTTCAAAGCGATTTGCATAGCCAGAGCAGTGGTGATCTTCATGTTTTTGAGGGTGGAAATGTTGCAATTTCGATCCACGTTCTTAGAGACGTGACAAACAATTTTAGTGAGGATAACATTTTGGGTAGAGGAGGGTTTGGAGTTGTTTATAAAGGTGAATTGCATGATGGGACTAGAATTGCTGTTAAAAGGATGAAATTTGTGGCAGAGAGCACTGAAGGAATGAATGAGTTCGAGGCAGAAATTGCATTCCTAGCTAAGGTCAAGCATAGGCATCTAGTTGCTCTTTTAGGATACTGCATCAACGGAAATGAGAGGCTTTTGGTGTACGAGTACATGCCACAAGGGACATTAACACAGCACTTGTTTAATTGGCGCGAGACCGGCGTACCTCCTCTTACTTGGAGGCAGAGAATCACAATAGCATTGGATGTGGCAAGAGGAGTTGAATATCTGCATGGCTTAGCTCCACAAAGTTTCATTCACAGAGACTTAAAACCCTCTAACATTCTTCTAGGGGATGACATGAGGGCCAAGGTGGCCGACTTTGGCTTGGTAAAATGTGCCCCTGATGCGAATTCTGTTGAGACTCGGGTAGCAGGGACGTTTGGTTATCTTGCACCAGAATATACAGCTACCGGACGAGTGACAACAAGAGTAGATGTTTATGCATTTGGAGTGGTGTTGATGCAACTTTTGAGTGGGAAGAAGGCCTTAGACTATACAATTCCAGATGAAAGGTCTCTCTTGGTTACATGGTTCCGCAGATTCCTTATTAAGAAGGAATACATTCCAAAGGCTATTGACGAAACTCTTAAGAACCATGATGAGGAGACAATGGAGTGTATATGCAAAGTCGCTCAGCTAGCAGGACATTGCACTGCTCATAATCCATTCCAAAGACCAGAGATGAGCTATGTGGTCAACATGCTGGCTCCTCTGGTTAGGAATTGGAAGCCTACCAGTCATGAAGAAGAAGAAAAGTATGGCATTGATCGGCACATGAGCCTTCCTCAAGGATTGGAATGGCAAGCCAATGAAGATGCTTCTGATGTTGAAGTCTCTTGGCTTACCAGTCTTCCCAGAAGTTTAAGTTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0012505 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0030054 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase_Tyr

Protein Analysis

911

Amino Acids

99.01

Weight (kDa)

5.84

Isoelectric Point (pI)

37.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006862)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23750
fragaria_vesca	FvH4_4g13110 FvH4_4g13110
malus_domestica	MD04G1019100.v1.1
prunus_persica	Prupe.1G168400_v2.0.a1 Prupe.1G168500_v2.0.a1 Prupe.1G168500_v2.0.a1
pyrus_communis	pycom04g01540 pycom13g29180
rosa_chinensis	RchiOBHm_Chr4g0412891 RchiOBHm_Chr4g0413671
rosa_laevigata	RLG00000008202 RLG00000008250
rosa_multiflora	Rmu_sc0004133.1_g000014 Rmu_sc0005621.1_g000017 Rmu_sc0012279.1_g000002
rosa_roxburghii	Rroxscaffold_5G00357130
rosa_rugosa	Rorug04G0117300
rosa_samantha	Rh4AG176200 Rh4AG181600 Rh4BG176600 Rh4CG187200 Rh4DG173400 Rh4DG177100
rosa_wichuraiana	Rw4G014790 Rw4G015180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1782
Acc36I	ACCTGC	2 cut(s)	400, 961
AccB7I	CCANNNNNTGG	1 cut(s)	1577
AccII	CGCG	1 cut(s)	2010
AciI	CCGC	4 cut(s)	74, 159, 968, 2395
AclI	AACGTT	1 cut(s)	849
AclWI	GGATC	5 cut(s)	625, 736, 959, 1139, 1699
AcoI	YGGCCR	1 cut(s)	2172
AcsI	RAATTY	5 cut(s)	1105, 1171, 1286, 1829, 2209
AcuI	CTGAAG	3 cut(s)	764, 1223, 1869
AdeI	CACNNNGTG	1 cut(s)	47
AfaI	GTAC	7 cut(s)	51, 670, 928, 1010, 1961, 1967, 2022
AfiI	CCNNNNNNNGG	8 cut(s)	135, 893, 1297, 1349, 1433, 1577, 1891, 2461
AflII	CTTAAG	1 cut(s)	2447
AjiI	CACGTC	1 cut(s)	1723
AjnI	CCWGG	4 cut(s)	20, 705, 952, 1453
Alw21I	GWGCWC	3 cut(s)	468, 1349, 1847
AlwI	GGATC	5 cut(s)	625, 736, 959, 1139, 1699
AlwNI	CAGNNNCTG	1 cut(s)	1427
Ama87I	CYCGRG	2 cut(s)	635, 2223
AoxI	GGCC	6 cut(s)	112, 301, 394, 2163, 2172, 2343
ApeKI	GCWGC	7 cut(s)	10, 13, 63, 66, 871, 1231, 1234
ApoI	RAATTY	5 cut(s)	1105, 1171, 1286, 1829, 2209
Asp700I	GAANNNNTTC	3 cut(s)	728, 1862, 2421
AspLEI	GCGC	1 cut(s)	2010
AspS9I	GGNCC	6 cut(s)	302, 737, 878, 897, 956, 2163
AsuC2I	CCSGG	2 cut(s)	1201, 1378
AsuHPI	GGTGA	7 cut(s)	187, 259, 1312, 1448, 1513, 1676, 1799
AsuII	TTCGAA	1 cut(s)	1388
AsuNHI	GCTAGC	2 cut(s)	1214, 2497
AvaI	CYCGRG	2 cut(s)	635, 2223
AvaII	GGWCC	4 cut(s)	737, 878, 897, 956
BaeGI	GKGCMC	1 cut(s)	2200
BaeI	ACNNNNGTAYC	2 cut(s)	2004, 2037
BanII	GRGCYC	2 cut(s)	468, 1349
BbsI	GAAGAC	2 cut(s)	138, 2702
Bbv12I	GWGCWC	3 cut(s)	468, 1349, 1847
BbvCI	CCTCAGC	1 cut(s)	59
BbvI	GCAGC	5 cut(s)	75, 78, 858, 1243, 1246
BccI	CCATC	6 cut(s)	209, 917, 1053, 1381, 1526, 1793
BciT130I	CCWGG	4 cut(s)	22, 707, 954, 1455
BciVI	GTATCC	1 cut(s)	1919
BcnI	CCSGG	2 cut(s)	1201, 1378
BfaI	CTAG	8 cut(s)	38, 1215, 1533, 1806, 1886, 1910, 2147, 2498
BfmI	CTRYAG	1 cut(s)	872
BfrI	CTTAAG	1 cut(s)	2447
BfuAI	ACCTGC	2 cut(s)	400, 961
BfuI	GTATCC	1 cut(s)	1919
BglI	GCCNNNNNGGC	1 cut(s)	2171
BisI	GCNGC	9 cut(s)	11, 14, 64, 67, 75, 160, 872, 1232, 1235
BlpI	GCTNAGC	2 cut(s)	2095, 2493
BlsI	GCNGC	9 cut(s)	12, 15, 65, 68, 76, 161, 873, 1233, 1236
Bme1390I	CCNGG	6 cut(s)	22, 707, 954, 1201, 1378, 1455
Bme18I	GGWCC	4 cut(s)	737, 878, 897, 956
BmeT110I	CYCGRG	2 cut(s)	635, 2223
BmgBI	CACGTC	1 cut(s)	1723
BmgT120I	GGNCC	6 cut(s)	302, 737, 878, 897, 956, 2163
BmiI	GGNNCC	6 cut(s)	304, 716, 879, 898, 2393, 2568
BmrFI	CCNGG	6 cut(s)	22, 707, 954, 1201, 1378, 1455
BmrI	ACTGGG	2 cut(s)	691, 1137
BmsI	GCATC	7 cut(s)	180, 487, 1915, 1941, 2194, 2310, 2665
BmtI	GCTAGC	2 cut(s)	1218, 2501
BmuI	ACTGGG	2 cut(s)	691, 1137
BpiI	GAAGAC	2 cut(s)	138, 2702
BplI	GAGNNNNNCTC	4 cut(s)	1408, 1440, 2629, 2661
BpmI	CTGGAG	1 cut(s)	1371
Bpu10I	CCTNAGC	2 cut(s)	59, 1890
Bpu1102I	GCTNAGC	2 cut(s)	2095, 2493
Bpu14I	TTCGAA	1 cut(s)	1388
BpuEI	CTTGAG	5 cut(s)	101, 385, 456, 739, 2631
BpuMI	CCSGG	2 cut(s)	1201, 1378
BsaI	GGTCTC	2 cut(s)	2006, 2379
BsaJI	CCNNGG	3 cut(s)	446, 634, 2166
BsaWI	WCCGGW	1 cut(s)	2270
BsaXI	ACNNNNNCTCC	4 cut(s)	197, 227, 1402, 1432
Bsc4I	CCNNNNNNNGG	8 cut(s)	135, 893, 1297, 1349, 1433, 1577, 1891, 2461
Bse118I	RCCGGY	2 cut(s)	1210, 2015
Bse1I	ACTGG	7 cut(s)	140, 697, 739, 808, 1132, 2595, 2706
Bse3DI	GCAATG	2 cut(s)	1327, 2506
BseBI	CCWGG	4 cut(s)	22, 707, 954, 1455
BseDI	CCNNGG	3 cut(s)	446, 634, 2166
BseGI	GGATG	4 cut(s)	1373, 1830, 2068, 2158
BseLI	CCNNNNNNNGG	8 cut(s)	135, 893, 1297, 1349, 1433, 1577, 1891, 2461
BseMI	GCAATG	2 cut(s)	1327, 2506
BseMII	CTCAG	6 cut(s)	73, 99, 275, 557, 1017, 2507
BseNI	ACTGG	7 cut(s)	140, 697, 739, 808, 1132, 2595, 2706
BseRI	GAGGAG	7 cut(s)	1374, 1377, 1776, 2016, 2088, 2477, 2559
BseSI	GKGCMC	1 cut(s)	2200
BseXI	GCAGC	5 cut(s)	75, 78, 858, 1243, 1246
BseYI	CCCAGC	1 cut(s)	162
Bsh1236I	CGCG	1 cut(s)	2010
BshFI	GGCC	6 cut(s)	114, 303, 396, 2165, 2174, 2345
BsiHKAI	GWGCWC	3 cut(s)	468, 1349, 1847
BsiHKCI	CYCGRG	2 cut(s)	635, 2223
BsiSI	CCGG	5 cut(s)	1200, 1211, 1377, 2016, 2271
BslFI	GGGAC	3 cut(s)	1816, 1993, 2248
BslI	CCNNNNNNNGG	8 cut(s)	135, 893, 1297, 1349, 1433, 1577, 1891, 2461
BsmBI	CGTCTC	1 cut(s)	1713
BsmFI	GGGAC	3 cut(s)	1816, 1993, 2248
BsmI	GAATGC	1 cut(s)	1880
BsnI	GGCC	6 cut(s)	114, 303, 396, 2165, 2174, 2345
Bso31I	GGTCTC	2 cut(s)	2006, 2379
BsoBI	CYCGRG	2 cut(s)	635, 2223
Bsp119I	TTCGAA	1 cut(s)	1388
Bsp1286I	GDGCHC	4 cut(s)	468, 1349, 1847, 2200
Bsp143I	GATC	8 cut(s)	617, 741, 775, 964, 1131, 1666, 1704, 2626
Bsp1720I	GCTNAGC	2 cut(s)	2095, 2493
Bsp19I	CCATGG	1 cut(s)	446
BspACI	CCGC	4 cut(s)	74, 159, 968, 2395
BspANI	GGCC	6 cut(s)	114, 303, 396, 2165, 2174, 2345
BspCNI	CTCAG	6 cut(s)	72, 98, 274, 558, 1018, 2506
BspFNI	CGCG	1 cut(s)	2010
BspHI	TCATGA	1 cut(s)	2599
BspLI	GGNNCC	6 cut(s)	304, 716, 879, 898, 2393, 2568
BspMAI	CTGCAG	1 cut(s)	876
BspMI	ACCTGC	2 cut(s)	400, 961
BspOI	GCTAGC	2 cut(s)	1218, 2501
BspPI	GGATC	5 cut(s)	625, 736, 959, 1139, 1699
BspT104I	TTCGAA	1 cut(s)	1388
BspTI	CTTAAG	1 cut(s)	2447
BspTNI	GGTCTC	2 cut(s)	2006, 2379
BsrDI	GCAATG	2 cut(s)	1327, 2506
BsrFI	RCCGGY	2 cut(s)	1210, 2015
BsrI	ACTGG	7 cut(s)	140, 697, 739, 808, 1132, 2595, 2706
BssAI	RCCGGY	2 cut(s)	1210, 2015
BssECI	CCNNGG	3 cut(s)	446, 634, 2166
BssMI	GATC	8 cut(s)	617, 741, 775, 964, 1131, 1666, 1704, 2626
BssT1I	CCWWGG	2 cut(s)	446, 2166
Bst2UI	CCWGG	4 cut(s)	22, 707, 954, 1455
Bst4CI	ACNGT	2 cut(s)	1102, 1300
Bst6I	CTCTTC	1 cut(s)	59
BstAFI	CTTAAG	1 cut(s)	2447
BstAPI	GCANNNNNTGC	2 cut(s)	506, 1877
BstBI	TTCGAA	1 cut(s)	1388
BstDSI	CCRYGG	1 cut(s)	446
BstENI	CCTNNNNNAGG	1 cut(s)	1889
BstF5I	GGATG	4 cut(s)	1373, 1830, 2068, 2158
BstFNI	CGCG	1 cut(s)	2010
BstHHI	GCGC	1 cut(s)	2010
BstKTI	GATC	8 cut(s)	620, 744, 778, 967, 1134, 1669, 1707, 2629
BstMBI	GATC	8 cut(s)	617, 741, 775, 964, 1131, 1666, 1704, 2626
BstNI	CCWGG	4 cut(s)	22, 707, 954, 1455
BstNSI	RCATGY	2 cut(s)	1972, 2563
BstSCI	CCNGG	6 cut(s)	20, 705, 952, 1199, 1376, 1453
BstSFI	CTRYAG	1 cut(s)	872
BstSLI	GKGCMC	1 cut(s)	2200
BstUI	CGCG	1 cut(s)	2010
BstV1I	GCAGC	5 cut(s)	75, 78, 858, 1243, 1246
BstV2I	GAAGAC	2 cut(s)	138, 2702
BstX2I	RGATCY	1 cut(s)	617
BstXI	CCANNNNNNTGG	2 cut(s)	734, 1661
BstYI	RGATCY	1 cut(s)	617
BsuI	GTATCC	1 cut(s)	1919
BsuRI	GGCC	6 cut(s)	114, 303, 396, 2165, 2174, 2345
BtgI	CCRYGG	1 cut(s)	446
BtrI	CACGTC	1 cut(s)	1723
BtsCI	GGATG	4 cut(s)	1373, 1830, 2068, 2158
BtsI	GCAGTG	2 cut(s)	1666, 2511
BtsIMutI	CAGTG	7 cut(s)	732, 1098, 1125, 1452, 1666, 1845, 2511
BveI	ACCTGC	2 cut(s)	400, 961
CaiI	CAGNNNCTG	1 cut(s)	1427
CciI	TCATGA	1 cut(s)	2599
CfoI	GCGC	1 cut(s)	2010
Cfr10I	RCCGGY	2 cut(s)	1210, 2015
Cfr13I	GGNCC	6 cut(s)	302, 737, 878, 897, 956, 2163
CsiI	ACCWGGT	1 cut(s)	705
Csp6I	GTAC	7 cut(s)	50, 669, 927, 1009, 1960, 1966, 2021
CviQI	GTAC	7 cut(s)	50, 669, 927, 1009, 1960, 1966, 2021
DpnI	GATC	8 cut(s)	619, 743, 777, 966, 1133, 1668, 1706, 2628
DpnII	GATC	8 cut(s)	617, 741, 775, 964, 1131, 1666, 1704, 2626
DraIII	CACNNNGTG	1 cut(s)	47
EaeI	YGGCCR	1 cut(s)	2172
Eam1104I	CTCTTC	1 cut(s)	59
EarI	CTCTTC	1 cut(s)	59
Ecl136II	GAGCTC	2 cut(s)	466, 1347
Eco130I	CCWWGG	2 cut(s)	446, 2166
Eco147I	AGGCCT	3 cut(s)	114, 396, 2345
Eco24I	GRGCYC	2 cut(s)	468, 1349
Eco31I	GGTCTC	2 cut(s)	2006, 2379
Eco32I	GATATC	1 cut(s)	535
Eco47I	GGWCC	4 cut(s)	737, 878, 897, 956
Eco53kI	GAGCTC	2 cut(s)	466, 1347
Eco57I	CTGAAG	3 cut(s)	764, 1223, 1869
Eco88I	CYCGRG	2 cut(s)	635, 2223
EcoICRI	GAGCTC	2 cut(s)	466, 1347
EcoNI	CCTNNNNNAGG	1 cut(s)	1889
EcoO109I	RGGNCCY	2 cut(s)	878, 956
EcoRI	GAATTC	1 cut(s)	2209
EcoRII	CCWGG	4 cut(s)	20, 705, 952, 1453
EcoRV	GATATC	1 cut(s)	535
EcoT14I	CCWWGG	2 cut(s)	446, 2166
EcoT22I	ATGCAT	1 cut(s)	2305
EcoT38I	GRGCYC	2 cut(s)	468, 1349
ErhI	CCWWGG	2 cut(s)	446, 2166
Esp3I	CGTCTC	1 cut(s)	1713
FalI	AAGNNNNNCTT	2 cut(s)	2330, 2362
FaqI	GGGAC	3 cut(s)	1816, 1993, 2248
Fnu4HI	GCNGC	9 cut(s)	11, 14, 64, 67, 75, 160, 872, 1232, 1235
FokI	GGATG	4 cut(s)	1360, 1837, 2075, 2165
FriOI	GRGCYC	2 cut(s)	468, 1349
Fsp4HI	GCNGC	9 cut(s)	11, 14, 64, 67, 75, 160, 872, 1232, 1235
FspBI	CTAG	8 cut(s)	38, 1215, 1533, 1806, 1886, 1910, 2147, 2498
GlaI	GCGC	1 cut(s)	2009
GluI	GCNGC	9 cut(s)	11, 14, 64, 67, 75, 160, 872, 1232, 1235
GsaI	CCCAGC	1 cut(s)	166
GsuI	CTGGAG	1 cut(s)	1371
HaeIII	GGCC	6 cut(s)	114, 303, 396, 2165, 2174, 2345
HapII	CCGG	5 cut(s)	1200, 1211, 1377, 2016, 2271
HhaI	GCGC	1 cut(s)	2010
Hin6I	GCGC	1 cut(s)	2008
HinP1I	GCGC	1 cut(s)	2008
HincII	GTYRAC	5 cut(s)	141, 801, 976, 1224, 2557
HindII	GTYRAC	5 cut(s)	141, 801, 976, 1224, 2557
HindIII	AAGCTT	5 cut(s)	101, 403, 474, 481, 607
HpaI	GTTAAC	2 cut(s)	801, 1224
HpaII	CCGG	5 cut(s)	1200, 1211, 1377, 2016, 2271
HphI	GGTGA	7 cut(s)	187, 259, 1312, 1448, 1513, 1676, 1799
Hpy166II	GTNNAC	7 cut(s)	50, 141, 801, 976, 1224, 1960, 2557
Hpy188I	TCNGA	7 cut(s)	88, 567, 741, 1284, 1344, 1416, 2683
Hpy188III	TCNNGA	9 cut(s)	118, 350, 615, 788, 1247, 1327, 1350, 2363, 2600
Hpy8I	GTNNAC	7 cut(s)	50, 141, 801, 976, 1224, 1960, 2557
HpyCH4III	ACNGT	2 cut(s)	1102, 1300
HpyCH4IV	ACGT	4 cut(s)	849, 1710, 1722, 2237
HpySE526I	ACGT	4 cut(s)	849, 1710, 1722, 2237
HspAI	GCGC	1 cut(s)	2008
KspAI	GTTAAC	2 cut(s)	801, 1224
Kzo9I	GATC	8 cut(s)	617, 741, 775, 964, 1131, 1666, 1704, 2626
LmnI	GCTCC	6 cut(s)	339, 720, 1062, 1429, 2104, 2572
Lsp1109I	GCAGC	5 cut(s)	75, 78, 858, 1243, 1246
LweI	GCATC	7 cut(s)	180, 487, 1915, 1941, 2194, 2310, 2665
MabI	ACCWGGT	1 cut(s)	705
MaeI	CTAG	8 cut(s)	38, 1215, 1533, 1806, 1886, 1910, 2147, 2498
MaeII	ACGT	4 cut(s)	849, 1710, 1722, 2237
MaeIII	GTNAC	7 cut(s)	179, 193, 487, 904, 1723, 2278, 2383
MalI	GATC	8 cut(s)	619, 743, 777, 966, 1133, 1668, 1706, 2628
MboI	GATC	8 cut(s)	617, 741, 775, 964, 1131, 1666, 1704, 2626
MflI	RGATCY	1 cut(s)	617
MhlI	GDGCHC	4 cut(s)	468, 1349, 1847, 2200
MlyI	GAGTC	6 cut(s)	77, 201, 1037, 1420, 1426, 2215
Mph1103I	ATGCAT	1 cut(s)	2305
MroXI	GAANNNNTTC	3 cut(s)	728, 1862, 2421
MslI	CAYNNNNRTG	2 cut(s)	824, 1499
MspA1I	CMGCKG	1 cut(s)	74
MspCI	CTTAAG	1 cut(s)	2447
MspI	CCGG	5 cut(s)	1200, 1211, 1377, 2016, 2271
MspR9I	CCNGG	6 cut(s)	22, 707, 954, 1201, 1378, 1455
Mva1269I	GAATGC	1 cut(s)	1880
MvaI	CCWGG	4 cut(s)	22, 707, 954, 1455
MvnI	CGCG	1 cut(s)	2010
NciI	CCSGG	2 cut(s)	1201, 1378
NcoI	CCATGG	1 cut(s)	446
NdeII	GATC	8 cut(s)	617, 741, 775, 964, 1131, 1666, 1704, 2626
NheI	GCTAGC	2 cut(s)	1214, 2497
NlaIV	GGNNCC	6 cut(s)	304, 716, 879, 898, 2393, 2568
NmuCI	GTSAC	6 cut(s)	179, 193, 487, 904, 1723, 2278
NsiI	ATGCAT	1 cut(s)	2305
NspI	RCATGY	2 cut(s)	1972, 2563
NspV	TTCGAA	1 cut(s)	1388
PagI	TCATGA	1 cut(s)	2599
PceI	AGGCCT	3 cut(s)	114, 396, 2345
PctI	GAATGC	1 cut(s)	1880
PdmI	GAANNNNTTC	3 cut(s)	728, 1862, 2421
PfeI	GAWTC	5 cut(s)	542, 625, 1439, 2046, 2400
PflFI	GACNNNGTC	1 cut(s)	1201
PflMI	CCANNNNNTGG	1 cut(s)	1577
PkrI	GCNGC	9 cut(s)	12, 15, 65, 68, 76, 161, 873, 1233, 1236
PleI	GAGTC	6 cut(s)	77, 200, 1036, 1419, 1425, 2215
PpsI	GAGTC	6 cut(s)	77, 200, 1036, 1419, 1425, 2215
PpuMI	RGGWCCY	2 cut(s)	878, 956
PsiI	TTATAA	1 cut(s)	1782
Psp124BI	GAGCTC	2 cut(s)	468, 1349
Psp1406I	AACGTT	1 cut(s)	849
Psp5II	RGGWCCY	2 cut(s)	878, 956
Psp6I	CCWGG	4 cut(s)	20, 705, 952, 1453
PspFI	CCCAGC	1 cut(s)	162
PspGI	CCWGG	4 cut(s)	20, 705, 952, 1453
PspN4I	GGNNCC	6 cut(s)	304, 716, 879, 898, 2393, 2568
PspPI	GGNCC	6 cut(s)	302, 737, 878, 897, 956, 2163
PspPPI	RGGWCCY	2 cut(s)	878, 956
PstI	CTGCAG	1 cut(s)	876
PstNI	CAGNNNCTG	1 cut(s)	1427
PsuI	RGATCY	1 cut(s)	617
PsyI	GACNNNGTC	1 cut(s)	1201
RsaI	GTAC	7 cut(s)	51, 670, 928, 1010, 1961, 1967, 2022
RsaNI	GTAC	7 cut(s)	50, 669, 927, 1009, 1960, 1966, 2021
RseI	CAYNNNNRTG	2 cut(s)	824, 1499
SacI	GAGCTC	2 cut(s)	468, 1349
SatI	GCNGC	9 cut(s)	11, 14, 64, 67, 75, 160, 872, 1232, 1235
Sau3AI	GATC	8 cut(s)	617, 741, 775, 964, 1131, 1666, 1704, 2626
Sau96I	GGNCC	6 cut(s)	302, 737, 878, 897, 956, 2163
SchI	GAGTC	6 cut(s)	77, 201, 1037, 1420, 1426, 2215
ScrFI	CCNGG	6 cut(s)	22, 707, 954, 1201, 1378, 1455
SduI	GDGCHC	4 cut(s)	468, 1349, 1847, 2200
SexAI	ACCWGGT	1 cut(s)	705
SfaNI	GCATC	7 cut(s)	180, 487, 1915, 1941, 2194, 2310, 2665
SfcI	CTRYAG	1 cut(s)	872
SfiI	GGCCNNNNNGGCC	1 cut(s)	2171
SfuI	TTCGAA	1 cut(s)	1388
SinI	GGWCC	4 cut(s)	737, 878, 897, 956
SmiMI	CAYNNNNRTG	2 cut(s)	824, 1499
SmlI	CTYRAG	6 cut(s)	116, 400, 471, 754, 2447, 2646
SmoI	CTYRAG	6 cut(s)	116, 400, 471, 754, 2447, 2646
SseBI	AGGCCT	3 cut(s)	114, 396, 2345
SsiI	CCGC	4 cut(s)	74, 159, 968, 2395
SspI	AATATT	1 cut(s)	1491
SspMI	CTAG	8 cut(s)	38, 1215, 1533, 1806, 1886, 1910, 2147, 2498
SstI	GAGCTC	2 cut(s)	468, 1349
StuI	AGGCCT	3 cut(s)	114, 396, 2345
StyD4I	CCNGG	6 cut(s)	20, 705, 952, 1199, 1376, 1453
StyI	CCWWGG	2 cut(s)	446, 2166
TaaI	ACNGT	2 cut(s)	1102, 1300
TaiI	ACGT	4 cut(s)	852, 1713, 1725, 2240
TaqI	TCGA	6 cut(s)	98, 1205, 1388, 1563, 1703, 1866
TatI	WGTACW	2 cut(s)	49, 1965
TauI	GCSGC	2 cut(s)	77, 162
TfiI	GAWTC	5 cut(s)	542, 625, 1439, 2046, 2400
TscAI	CASTG	7 cut(s)	739, 1105, 1132, 1452, 1666, 1852, 2518
TseFI	GTSAC	6 cut(s)	179, 193, 487, 904, 1723, 2278
TseI	GCWGC	7 cut(s)	10, 13, 63, 66, 871, 1231, 1234
Tsp45I	GTSAC	6 cut(s)	179, 193, 487, 904, 1723, 2278
TspGWI	ACGGA	2 cut(s)	198, 1953
TspRI	CASTG	7 cut(s)	739, 1105, 1132, 1452, 1666, 1852, 2518
Tth111I	GACNNNGTC	1 cut(s)	1201
Van91I	CCANNNNNTGG	1 cut(s)	1577
Vha464I	CTTAAG	1 cut(s)	2447
VpaK11BI	GGWCC	4 cut(s)	737, 878, 897, 956
XagI	CCTNNNNNAGG	1 cut(s)	1889
XapI	RAATTY	5 cut(s)	1105, 1171, 1286, 1829, 2209
XceI	RCATGY	2 cut(s)	1972, 2563
XmnI	GAANNNNTTC	3 cut(s)	728, 1862, 2421
XspI	CTAG	8 cut(s)	38, 1215, 1533, 1806, 1886, 1910, 2147, 2498
Zsp2I	ATGCAT	1 cut(s)	2305

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.