Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0006862

Physical Location & Seq

Genomic Coordinates Reverse (-)

25581028 .. 25584246

Gene Structure 3219 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g29180.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2778 bp

ATGGGTAAGCAGAAAACCCTTCGAGCTCTCATTCTAGCTCTCTCTCTCCTCCTCCTGATCACCACCGCCTCCTCCGCCGCCGACGACTCCGACGTCATGTCAAAACTCGCAGAAGGCCTCAGCCCCGCACCCAAAGACTGGTCCAAAAGCACCGGCTACTGCGATTGGGACGGCGTCAAATGCGACTCTTCAAACAGAATCACCTCCATCAACTTAGCCTCCAAAGCTCTCTCCGGTTCTCTCCCTTCAAATCTGAACTCTCTCTCTCAGCTCACCACTCTCTCTCTCCAGAGCAACTCTCTCTCCGGCGCCTTTCCTTCTTTGGCCAACCTCTCCTTCCTCCAAGAAATCTACCTCGATACCAACAACTTCACCTCCATTCCCGCCGGCTGCTTCAAAGGCCTCTCGAGCTTGCAGATTTTGAGCATGAGCCAGAACATCAATCTCGACTCGTGGGTTTTCCCCTCGGAGCTCACTGAAGCTTCCAGCTTGGTCACTTTGGCTGCTGGCAATGCAAATTTATATGGGCCGTTGCCTGATGTGTTTGATTCGTTTCCGAACTTGCAAAATGTAAGGCTTTCGTACAATAACTTTACTGGGTTTTTGCCCAAAACGTTTTCTGGATCTGGTATTCAGAACCTCTGGCTTAACAATCAGCTATTTGGGTTGTCTGGCACTATTGAGGTCTTAGCAAACATGACCCAGTTGTCCCAGGTTTGGCTCCATAAGAACCAATTCACTGGTCCGATCCCCGACCTCTCAAAGTGCGAAACTTTGTTCGATCTTCAGATCCGGGATAACCAGTTTACTGGCATTGTGCCCTCCACGTTGATGTCCATATCCAGTTTGAAGAACGTCTCTCTGGACAACAACAAACTGCAGGGTCCAATGCCGGTTTTTGGGTCCAATGTGGAAAAGTCCACAGTTGATGGTAATAGCTTTTGTCAAACGACTCCAGGGCGTTGTGATCCGCTGGTCACCACGCTGCTTGAGGTTGCAGGGGCTTTTGGGTACCCGGTTTTGCTTGCTGACTCTTGGGAAGGGAACAAGCCTTGCAGTGGATGGAGCTTCATTGTTTGTGATCCACAGGGAAAGGTTTTCACAGTGAATTTTGAGAACAAGCATTTCAATGGGACCATTTCCCCTGCTTTTGCCAATCTGACATCGTTGAAAAATTTGGTGTTGAGTCGTAACAATTTGGTTGGGTCGATACCAGATAGCTTGCTAAGCTTGGCTCAACTTCAGCTTCTTGATGTTTCCAACAACAATCTAAGTGGGGCAATTCCAAAATTTCCATCTAGGGTGAAGTTAATTACAAATGGTAATGTGTTGATTGGGACTACTCCGAGCACTGGAGGGGAAGGAGGTACTCCGTCGGGTTCTGGTTCTAATGGAACTATTCCTAGTGGGAGTCCAGCTCTGGTATCGAATGGTTCTTCAGTATCGCCTGGTATGATTGCTGGTATAGTTATTGCTGTTATAATTTTCATTGTGGTGGTATTGTTTGTGTCCTTCAAATGCTATACTAGTAAAAAGCATAGGAAATTTGGAAGGGTGGGTAATCCATCAAATGGGACAGAAATTGCTAAGAGTGATGTTATGAGTAGCGCAAATGGGTACATTGGAGTTACAAGTGAACTGCAAAGCCAGAGCAGTGGTGACCTTCACGTTTTTGAGGGTGGAAATGTTGCAATTTCGATCCAAGTTCTTAGACAAGTGACAAAAAATTTTAGCGAGGACAACATATTAGGCAGAGGAGGATTTGGAGTTGTTTATAAAGGCGAATTGCATGATGGGACTAAAGTTGCCGTCAAACGGATGGAATCTGTGGCAGTAGGAACAAAGGGATTGAACGAGTTTCAGGCAGAAATCGCGGTCCTTACTAAGGTCAGGCATAGGCATCTGGTTGCGCTTTTGGGATCCTGTATCAATGGCAACGAGAGACTTTTGGTCTATGAGTACATGCCACAAGGGACTTTAACACAACATTTATTTGAATGGCACGAGACTGGAGTGCCTCCACTAACTTGGAAGCAGAGAGTAACAATAGCATTGGATGTGGCACGAGGAGTGGAATATTTGCACAGCTTGGCTCAACAAAGTTTTATTCACAGAGATTTAAAGCCCTCAAACATACTATTGGGGGATGACATGAGGGCCAAGGTTGCTGACTTTGGTTTGGTTAAAAATGCCCCCGACGGGAAGTATTCTGTTGAGACAAGGCTGGCCGGGACATTCGGGTATCTCGCACCAGAATATGCAGCTACTGGCAGAGTCACTACAAAAGTAGATGTTTATGCATTCGGAGTGGTTTTGATGGAGTTGATGAGTGGTAGAAAAGCTCTAGATGATACAATGCCGGATGAACGGTCTCATTTGGTCTCATGGTTCCGCAGAGTCCTTGTCAACAAAGAAAACATTCCAAAGGCTATTGACCAAACTCTTGACCCCGATGAGGAGACAATGGAGAGCATATACAAAGTTGCTGAGCTGGCAGGACACTGCACTGCTCGTGAGCCATACCAGAGACCGGACATGGGACATGCTGTCAACATCCTGGGTCCTCTTGTTGAGCACTGGAAACCAACCACCCATGAAAAAGAAGAAAACTCTGGCATCGACCTGCACATGAGCCTTCCGCAAGCGTTACAAAGATGGCAAGCCAATGAAGGTACTTCTAGGATGTTTGACGATATGTCCTTCTCTCAAACTCAATCAAGCATCCCTTCAAAACCTTCTGGATTTGCTGACTCGTTCGATTCAATGGATTGTCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

926

Amino Acids

100.04

Weight (kDa)

5.98

Isoelectric Point (pI)

38.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006862)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23750
fragaria_vesca	FvH4_4g13110 FvH4_4g13110
malus_domestica	MD04G1019100.v1.1
prunus_persica	Prupe.1G168400_v2.0.a1 Prupe.1G168500_v2.0.a1 Prupe.1G168500_v2.0.a1
pyrus_communis	pycom04g01540 pycom13g29180
rosa_chinensis	RchiOBHm_Chr4g0412891 RchiOBHm_Chr4g0413671
rosa_laevigata	RLG00000008202 RLG00000008250
rosa_multiflora	Rmu_sc0004133.1_g000014 Rmu_sc0005621.1_g000017 Rmu_sc0012279.1_g000002
rosa_roxburghii	Rroxscaffold_5G00357130
rosa_rugosa	Rorug04G0117300
rosa_samantha	Rh4AG176200 Rh4AG181600 Rh4BG176600 Rh4CG187200 Rh4DG173400 Rh4DG177100
rosa_wichuraiana	Rw4G014790 Rw4G015180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1481, 1776
AasI	GACNNNNNNGTC	2 cut(s)	92, 706
AatII	GACGTC	1 cut(s)	96
Acc36I	ACCTGC	1 cut(s)	2631
Acc65I	GGTACC	1 cut(s)	1011
AccB1I	GGYRCC	2 cut(s)	308, 1011
AccB7I	CCANNNNNTGG	2 cut(s)	138, 1571
AccII	CGCG	1 cut(s)	1874
AciI	CCGC	9 cut(s)	66, 75, 78, 126, 384, 971, 1874, 2392, 2639
AclI	AACGTT	1 cut(s)	614
AclWI	GGATC	8 cut(s)	631, 742, 784, 962, 1076, 1693, 1914, 1927
AcoI	YGGCCR	2 cut(s)	324, 2226
AcsI	RAATTY	6 cut(s)	517, 1108, 1174, 1289, 1544, 1726
AcuI	CTGAAG	4 cut(s)	498, 770, 1226, 1422
AcyI	GRCGYC	3 cut(s)	93, 174, 309
AfaI	GTAC	6 cut(s)	584, 1013, 1369, 1619, 1961, 2674
AhdI	GACNNNNNGTC	4 cut(s)	97, 1949, 2546, 2695
AhlI	ACTAGT	1 cut(s)	1526
AjnI	CCWGG	4 cut(s)	711, 955, 1447, 2556
AjuI	GAANNNNNNNTTGG	2 cut(s)	320, 352
Alw21I	GWGCWC	4 cut(s)	28, 474, 1352, 2577
Alw26I	GTCTC	8 cut(s)	862, 1936, 2000, 2210, 2376, 2386, 2453, 2521
AlwI	GGATC	8 cut(s)	631, 742, 784, 962, 1076, 1693, 1914, 1927
AlwNI	CAGNNNCTG	1 cut(s)	2267
Ama87I	CYCGRG	1 cut(s)	406
AoxI	GGCC	6 cut(s)	115, 324, 400, 527, 2157, 2226
ApeKI	GCWGC	4 cut(s)	390, 503, 985, 2261
ApoI	RAATTY	6 cut(s)	517, 1108, 1174, 1289, 1544, 1726
Asp700I	GAANNNNTTC	2 cut(s)	734, 2418
Asp718I	GGTACC	1 cut(s)	1011
AspLEI	GCGC	3 cut(s)	311, 1610, 1912
AspS9I	GGNCC	9 cut(s)	141, 527, 743, 884, 903, 1134, 1876, 2157, 2561
AsuC2I	CCSGG	3 cut(s)	794, 1016, 2230
AsuHPI	GGTGA	7 cut(s)	52, 193, 265, 364, 970, 1315, 1670
AvaI	CYCGRG	1 cut(s)	406
AvaII	GGWCC	7 cut(s)	141, 743, 884, 903, 1134, 1876, 2561
BaeGI	GKGCMC	1 cut(s)	822
BalI	TGGCCA	1 cut(s)	326
BamHI	GGATCC	1 cut(s)	1919
BanI	GGYRCC	2 cut(s)	308, 1011
BanII	GRGCYC	2 cut(s)	28, 474
BauI	CACGAG	4 cut(s)	451, 2003, 2064, 2511
Bbv12I	GWGCWC	4 cut(s)	28, 474, 1352, 2577
BbvCI	CCTCAGC	1 cut(s)	119
BbvI	GCAGC	4 cut(s)	377, 490, 972, 2273
BccI	CCATC	9 cut(s)	215, 923, 1056, 1303, 1573, 1787, 1813, 2311, 2649
BceAI	ACGGC	3 cut(s)	187, 514, 1793
BciT130I	CCWGG	4 cut(s)	713, 957, 1449, 2558
BclI	TGATCA	1 cut(s)	57
BcnI	CCSGG	3 cut(s)	794, 1016, 2230
BcoDI	GTCTC	8 cut(s)	862, 1936, 2000, 2210, 2376, 2386, 2453, 2521
BcuI	ACTAGT	1 cut(s)	1526
BfaI	CTAG	6 cut(s)	35, 1299, 1404, 1527, 2345, 2679
BfmI	CTRYAG	1 cut(s)	878
BfoI	RGCGCY	1 cut(s)	312
BfuAI	ACCTGC	1 cut(s)	2631
BisI	GCNGC	5 cut(s)	78, 391, 504, 986, 2262
BlpI	GCTNAGC	2 cut(s)	1226, 2487
BlsI	GCNGC	5 cut(s)	79, 392, 505, 987, 2263
Bme1390I	CCNGG	7 cut(s)	713, 794, 957, 1016, 1449, 2230, 2558
Bme18I	GGWCC	7 cut(s)	141, 743, 884, 903, 1134, 1876, 2561
BmeRI	GACNNNNNGTC	4 cut(s)	97, 1949, 2546, 2695
BmeT110I	CYCGRG	1 cut(s)	406
BmgT120I	GGNCC	9 cut(s)	141, 527, 743, 884, 903, 1134, 1876, 2157, 2561
BmiI	GGNNCC	9 cut(s)	310, 722, 885, 904, 1013, 1135, 1921, 2390, 2562
BmrFI	CCNGG	7 cut(s)	713, 794, 957, 1016, 1449, 2230, 2558
BmrI	ACTGGG	2 cut(s)	606, 697
BmsI	GCATC	3 cut(s)	1909, 2625, 2730
BmuI	ACTGGG	2 cut(s)	606, 697
BplI	GAGNNNNNCTC	4 cut(s)	283, 315, 1402, 1434
BpmI	CTGGAG	4 cut(s)	272, 939, 1374, 2031
Bpu10I	CCTNAGC	1 cut(s)	119
Bpu1102I	GCTNAGC	2 cut(s)	1226, 2487
BpuEI	CTTGAG	1 cut(s)	1010
BpuMI	CCSGG	3 cut(s)	794, 1016, 2230
BsaHI	GRCGYC	3 cut(s)	93, 174, 309
BsaI	GGTCTC	3 cut(s)	2376, 2386, 2521
BsaJI	CCNNGG	5 cut(s)	465, 711, 956, 2160, 2557
BsaWI	WCCGGW	2 cut(s)	233, 2530
BsaXI	ACNNNNNCTCC	6 cut(s)	203, 233, 287, 317, 359, 389
Bse118I	RCCGGY	3 cut(s)	152, 386, 892
Bse3DI	GCAATG	1 cut(s)	517
BseBI	CCWGG	4 cut(s)	713, 957, 1449, 2558
BseDI	CCNNGG	5 cut(s)	465, 711, 956, 2160, 2557
BseGI	GGATG	8 cut(s)	1067, 1824, 2062, 2152, 2368, 2553, 2688, 2721
BseMI	GCAATG	1 cut(s)	517
BseMII	CTCAG	3 cut(s)	133, 281, 2478
BseRI	GAGGAG	6 cut(s)	38, 41, 61, 1770, 2082, 2471
BseSI	GKGCMC	1 cut(s)	822
BseXI	GCAGC	4 cut(s)	377, 490, 972, 2273
BsgI	GTGCAG	2 cut(s)	2488, 2609
Bsh1236I	CGCG	1 cut(s)	1874
BshFI	GGCC	6 cut(s)	117, 326, 402, 529, 2159, 2228
BshNI	GGYRCC	2 cut(s)	308, 1011
BsiHKAI	GWGCWC	4 cut(s)	28, 474, 1352, 2577
BsiHKCI	CYCGRG	1 cut(s)	406
BslFI	GGGAC	9 cut(s)	182, 694, 1147, 1351, 1588, 1810, 1987, 2245, 2553
BsmAI	GTCTC	8 cut(s)	862, 1936, 2000, 2210, 2376, 2386, 2453, 2521
BsmBI	CGTCTC	1 cut(s)	862
BsmFI	GGGAC	9 cut(s)	182, 694, 1147, 1351, 1588, 1810, 1987, 2245, 2553
BsmI	GAATGC	1 cut(s)	2300
BsnI	GGCC	6 cut(s)	117, 326, 402, 529, 2159, 2228
Bso31I	GGTCTC	3 cut(s)	2376, 2386, 2521
BsoBI	CYCGRG	1 cut(s)	406
Bsp1286I	GDGCHC	5 cut(s)	28, 474, 822, 1352, 2577
Bsp143I	GATC	9 cut(s)	57, 623, 747, 781, 789, 967, 1081, 1698, 1919
Bsp1720I	GCTNAGC	2 cut(s)	1226, 2487
BspACI	CCGC	9 cut(s)	66, 75, 78, 126, 384, 971, 1874, 2392, 2639
BspANI	GGCC	6 cut(s)	117, 326, 402, 529, 2159, 2228
BspCNI	CTCAG	3 cut(s)	132, 280, 2479
BspFNI	CGCG	1 cut(s)	1874
BspLI	GGNNCC	9 cut(s)	310, 722, 885, 904, 1013, 1135, 1921, 2390, 2562
BspMAI	CTGCAG	1 cut(s)	882
BspMI	ACCTGC	1 cut(s)	2631
BspPI	GGATC	8 cut(s)	631, 742, 784, 962, 1076, 1693, 1914, 1927
BspT107I	GGYRCC	2 cut(s)	308, 1011
BspTNI	GGTCTC	3 cut(s)	2376, 2386, 2521
BsrDI	GCAATG	1 cut(s)	517
BsrFI	RCCGGY	3 cut(s)	152, 386, 892
BssAI	RCCGGY	3 cut(s)	152, 386, 892
BssECI	CCNNGG	5 cut(s)	465, 711, 956, 2160, 2557
BssMI	GATC	9 cut(s)	57, 623, 747, 781, 789, 967, 1081, 1698, 1919
BssNI	GRCGYC	3 cut(s)	93, 174, 309
BssSI	CACGAG	4 cut(s)	451, 2003, 2064, 2511
BssT1I	CCWWGG	1 cut(s)	2160
Bst2BI	CACGAG	4 cut(s)	451, 2003, 2064, 2511
Bst2UI	CCWGG	4 cut(s)	713, 957, 1449, 2558
Bst4CI	ACNGT	3 cut(s)	925, 1105, 2370
Bst6I	CTCTTC	1 cut(s)	193
BstACI	GRCGYC	3 cut(s)	93, 174, 309
BstC8I	GCNNGC	9 cut(s)	388, 413, 508, 1026, 1223, 2226, 2493, 2643, 2661
BstEII	GGTNACC	2 cut(s)	976, 1658
BstENI	CCTNNNNNAGG	1 cut(s)	1883
BstF5I	GGATG	8 cut(s)	1067, 1824, 2062, 2152, 2368, 2553, 2688, 2721
BstFNI	CGCG	1 cut(s)	1874
BstH2I	RGCGCY	1 cut(s)	312
BstHHI	GCGC	3 cut(s)	311, 1610, 1912
BstKTI	GATC	9 cut(s)	60, 626, 750, 784, 792, 970, 1084, 1701, 1922
BstMAI	GTCTC	8 cut(s)	862, 1936, 2000, 2210, 2376, 2386, 2453, 2521
BstMBI	GATC	9 cut(s)	57, 623, 747, 781, 789, 967, 1081, 1698, 1919
BstNI	CCWGG	4 cut(s)	713, 957, 1449, 2558
BstNSI	RCATGY	2 cut(s)	1966, 2546
BstPI	GGTNACC	2 cut(s)	976, 1658
BstSCI	CCNGG	7 cut(s)	711, 792, 955, 1014, 1447, 2228, 2556
BstSFI	CTRYAG	1 cut(s)	878
BstSLI	GKGCMC	1 cut(s)	822
BstUI	CGCG	1 cut(s)	1874
BstV1I	GCAGC	4 cut(s)	377, 490, 972, 2273
BstX2I	RGATCY	3 cut(s)	623, 789, 1919
BstXI	CCANNNNNNTGG	4 cut(s)	740, 809, 1655, 2028
BstYI	RGATCY	3 cut(s)	623, 789, 1919
BsuRI	GGCC	6 cut(s)	117, 326, 402, 529, 2159, 2228
BtsCI	GGATG	8 cut(s)	1067, 1824, 2062, 2152, 2368, 2553, 2688, 2721
BtsI	GCAGTG	4 cut(s)	1063, 1660, 2500, 2505
BtsIMutI	CAGTG	9 cut(s)	474, 738, 1063, 1110, 1350, 1660, 2500, 2505, 2575
BveI	ACCTGC	1 cut(s)	2631
Cac8I	GCNNGC	9 cut(s)	388, 413, 508, 1026, 1223, 2226, 2493, 2643, 2661
CaiI	CAGNNNCTG	1 cut(s)	2267
CfoI	GCGC	3 cut(s)	311, 1610, 1912
Cfr10I	RCCGGY	3 cut(s)	152, 386, 892
Cfr13I	GGNCC	9 cut(s)	141, 527, 743, 884, 903, 1134, 1876, 2157, 2561
CseI	GACGC	1 cut(s)	163
Csp6I	GTAC	6 cut(s)	583, 1012, 1368, 1618, 1960, 2673
CspCI	CAANNNNNGTGG	4 cut(s)	970, 1005, 1255, 1290
CviQI	GTAC	6 cut(s)	583, 1012, 1368, 1618, 1960, 2673
DinI	GGCGCC	1 cut(s)	310
DpnI	GATC	9 cut(s)	59, 625, 749, 783, 791, 969, 1083, 1700, 1921
DpnII	GATC	9 cut(s)	57, 623, 747, 781, 789, 967, 1081, 1698, 1919
DraI	TTTAAA	1 cut(s)	2121
DrdI	GACNNNNNNGTC	2 cut(s)	92, 706
DriI	GACNNNNNGTC	4 cut(s)	97, 1949, 2546, 2695
DseDI	GACNNNNNNGTC	2 cut(s)	92, 706
EaeI	YGGCCR	2 cut(s)	324, 2226
Eam1104I	CTCTTC	1 cut(s)	193
Eam1105I	GACNNNNNGTC	4 cut(s)	97, 1949, 2546, 2695
EarI	CTCTTC	1 cut(s)	193
EciI	GGCGGA	1 cut(s)	64
Ecl136II	GAGCTC	2 cut(s)	26, 472
Eco130I	CCWWGG	1 cut(s)	2160
Eco147I	AGGCCT	2 cut(s)	117, 402
Eco24I	GRGCYC	2 cut(s)	28, 474
Eco31I	GGTCTC	3 cut(s)	2376, 2386, 2521
Eco47I	GGWCC	7 cut(s)	141, 743, 884, 903, 1134, 1876, 2561
Eco53kI	GAGCTC	2 cut(s)	26, 472
Eco57I	CTGAAG	4 cut(s)	498, 770, 1226, 1422
Eco88I	CYCGRG	1 cut(s)	406
Eco91I	GGTNACC	2 cut(s)	976, 1658
EcoICRI	GAGCTC	2 cut(s)	26, 472
EcoNI	CCTNNNNNAGG	1 cut(s)	1883
EcoO109I	RGGNCCY	1 cut(s)	2561
EcoO65I	GGTNACC	2 cut(s)	976, 1658
EcoRII	CCWGG	4 cut(s)	711, 955, 1447, 2556
EcoT14I	CCWWGG	1 cut(s)	2160
EcoT22I	ATGCAT	1 cut(s)	2302
EcoT38I	GRGCYC	2 cut(s)	28, 474
EgeI	GGCGCC	1 cut(s)	310
EheI	GGCGCC	1 cut(s)	310
ErhI	CCWWGG	1 cut(s)	2160
Esp3I	CGTCTC	1 cut(s)	862
FalI	AAGNNNNNCTT	2 cut(s)	2710, 2742
FaqI	GGGAC	9 cut(s)	182, 694, 1147, 1351, 1588, 1810, 1987, 2245, 2553
FauI	CCCGC	2 cut(s)	133, 391
FbaI	TGATCA	1 cut(s)	57
Fnu4HI	GCNGC	5 cut(s)	78, 391, 504, 986, 2262
FokI	GGATG	8 cut(s)	1074, 1831, 2069, 2159, 2375, 2540, 2695, 2708
FriOI	GRGCYC	2 cut(s)	28, 474
Fsp4HI	GCNGC	5 cut(s)	78, 391, 504, 986, 2262
FspBI	CTAG	6 cut(s)	35, 1299, 1404, 1527, 2345, 2679
GlaI	GCGC	3 cut(s)	310, 1609, 1911
GluI	GCNGC	5 cut(s)	78, 391, 504, 986, 2262
GsuI	CTGGAG	4 cut(s)	272, 939, 1374, 2031
HaeII	RGCGCY	1 cut(s)	312
HaeIII	GGCC	6 cut(s)	117, 326, 402, 529, 2159, 2228
HgaI	GACGC	1 cut(s)	163
HhaI	GCGC	3 cut(s)	311, 1610, 1912
Hin1I	GRCGYC	3 cut(s)	93, 174, 309
Hin6I	GCGC	3 cut(s)	309, 1608, 1910
HinP1I	GCGC	3 cut(s)	309, 1608, 1910
HincII	GTYRAC	2 cut(s)	2407, 2551
HindII	GTYRAC	2 cut(s)	2407, 2551
HindIII	AAGCTT	2 cut(s)	480, 1228
HphI	GGTGA	7 cut(s)	52, 193, 265, 364, 970, 1315, 1670
Hpy166II	GTNNAC	5 cut(s)	807, 921, 1637, 2407, 2551
Hpy8I	GTNNAC	5 cut(s)	807, 921, 1637, 2407, 2551
Hpy99I	CGWCG	4 cut(s)	86, 95, 1378, 2201
HpyCH4III	ACNGT	3 cut(s)	925, 1105, 2370
HpyCH4IV	ACGT	5 cut(s)	93, 614, 827, 855, 1668
HpySE526I	ACGT	5 cut(s)	93, 614, 827, 855, 1668
Hsp92I	GRCGYC	3 cut(s)	93, 174, 309
HspAI	GCGC	3 cut(s)	309, 1608, 1910
KasI	GGCGCC	1 cut(s)	308
KpnI	GGTACC	1 cut(s)	1015
KroI	GCCGGC	1 cut(s)	386
KroNI	GCCGGC	1 cut(s)	388
Ksp22I	TGATCA	1 cut(s)	57
Kzo9I	GATC	9 cut(s)	57, 623, 747, 781, 789, 967, 1081, 1698, 1919
LmnI	GCTCC	3 cut(s)	469, 726, 1065
Lsp1109I	GCAGC	4 cut(s)	377, 490, 972, 2273
LweI	GCATC	3 cut(s)	1909, 2625, 2730
MaeI	CTAG	6 cut(s)	35, 1299, 1404, 1527, 2345, 2679
MaeII	ACGT	5 cut(s)	93, 614, 827, 855, 1668
MaeIII	GTNAC	9 cut(s)	493, 976, 1190, 1627, 1658, 1717, 2041, 2275, 2646
MalI	GATC	9 cut(s)	59, 625, 749, 783, 791, 969, 1083, 1700, 1921
MboI	GATC	9 cut(s)	57, 623, 747, 781, 789, 967, 1081, 1698, 1919
MboII	GAAGA	5 cut(s)	180, 776, 862, 1428, 2615
MflI	RGATCY	3 cut(s)	623, 789, 1919
MhlI	GDGCHC	5 cut(s)	28, 474, 822, 1352, 2577
MlsI	TGGCCA	1 cut(s)	326
MluNI	TGGCCA	1 cut(s)	326
Mly113I	GGCGCC	1 cut(s)	309
MmeI	TCCRAC	2 cut(s)	114, 1284
Mox20I	TGGCCA	1 cut(s)	326
Mph1103I	ATGCAT	1 cut(s)	2302
MroNI	GCCGGC	1 cut(s)	386
MroXI	GAANNNNTTC	2 cut(s)	734, 2418
MscI	TGGCCA	1 cut(s)	326
MseI	TTAA	5 cut(s)	648, 1310, 1979, 2120, 2184
MslI	CAYNNNNRTG	3 cut(s)	830, 1128, 1493
Msp20I	TGGCCA	1 cut(s)	326
MspA1I	CMGCKG	1 cut(s)	973
MspR9I	CCNGG	7 cut(s)	713, 794, 957, 1016, 1449, 2230, 2558
Mva1269I	GAATGC	1 cut(s)	2300
MvaI	CCWGG	4 cut(s)	713, 957, 1449, 2558
MvnI	CGCG	1 cut(s)	1874
NaeI	GCCGGC	1 cut(s)	388
NarI	GGCGCC	1 cut(s)	309
NciI	CCSGG	3 cut(s)	794, 1016, 2230
NdeII	GATC	9 cut(s)	57, 623, 747, 781, 789, 967, 1081, 1698, 1919
NgoMIV	GCCGGC	1 cut(s)	386
NlaIV	GGNNCC	9 cut(s)	310, 722, 885, 904, 1013, 1135, 1921, 2390, 2562
NmuCI	GTSAC	5 cut(s)	493, 976, 1658, 1717, 2275
NsiI	ATGCAT	1 cut(s)	2302
NspI	RCATGY	2 cut(s)	1966, 2546
PaeR7I	CTCGAG	1 cut(s)	406
PceI	AGGCCT	2 cut(s)	117, 402
PcsI	WCGNNNNNNNCGW	1 cut(s)	90
PctI	GAATGC	1 cut(s)	2300
PdiI	GCCGGC	1 cut(s)	388
PdmI	GAANNNNTTC	2 cut(s)	734, 2418
PfeI	GAWTC	4 cut(s)	198, 548, 1823, 2759
PflFI	GACNNNGTC	1 cut(s)	173
PflMI	CCANNNNNTGG	2 cut(s)	138, 1571
PfoI	TCCNGGA	1 cut(s)	792
PkrI	GCNGC	5 cut(s)	79, 392, 505, 987, 2263
PluTI	GGCGCC	1 cut(s)	312
PpuMI	RGGWCCY	1 cut(s)	2561
PsiI	TTATAA	2 cut(s)	1481, 1776
Psp124BI	GAGCTC	2 cut(s)	28, 474
Psp1406I	AACGTT	1 cut(s)	614
Psp5II	RGGWCCY	1 cut(s)	2561
Psp6I	CCWGG	4 cut(s)	711, 955, 1447, 2556
PspEI	GGTNACC	2 cut(s)	976, 1658
PspGI	CCWGG	4 cut(s)	711, 955, 1447, 2556
PspN4I	GGNNCC	9 cut(s)	310, 722, 885, 904, 1013, 1135, 1921, 2390, 2562
PspPI	GGNCC	9 cut(s)	141, 527, 743, 884, 903, 1134, 1876, 2157, 2561
PspPPI	RGGWCCY	1 cut(s)	2561
PstI	CTGCAG	1 cut(s)	882
PstNI	CAGNNNCTG	1 cut(s)	2267
PsuI	RGATCY	3 cut(s)	623, 789, 1919
PsyI	GACNNNGTC	1 cut(s)	173
RsaI	GTAC	6 cut(s)	584, 1013, 1369, 1619, 1961, 2674
RsaNI	GTAC	6 cut(s)	583, 1012, 1368, 1618, 1960, 2673
RseI	CAYNNNNRTG	3 cut(s)	830, 1128, 1493
SacI	GAGCTC	2 cut(s)	28, 474
SaqAI	TTAA	5 cut(s)	648, 1310, 1979, 2120, 2184
SatI	GCNGC	5 cut(s)	78, 391, 504, 986, 2262
Sau3AI	GATC	9 cut(s)	57, 623, 747, 781, 789, 967, 1081, 1698, 1919
Sau96I	GGNCC	9 cut(s)	141, 527, 743, 884, 903, 1134, 1876, 2157, 2561
ScrFI	CCNGG	7 cut(s)	713, 794, 957, 1016, 1449, 2230, 2558
SduI	GDGCHC	5 cut(s)	28, 474, 822, 1352, 2577
SfaNI	GCATC	3 cut(s)	1909, 2625, 2730
SfcI	CTRYAG	1 cut(s)	878
SfoI	GGCGCC	1 cut(s)	310
Sfr274I	CTCGAG	1 cut(s)	406
SinI	GGWCC	7 cut(s)	141, 743, 884, 903, 1134, 1876, 2561
SlaI	CTCGAG	1 cut(s)	406
SmiMI	CAYNNNNRTG	3 cut(s)	830, 1128, 1493
SmlI	CTYRAG	2 cut(s)	406, 989
SmoI	CTYRAG	2 cut(s)	406, 989
SpeI	ACTAGT	1 cut(s)	1526
SseBI	AGGCCT	2 cut(s)	117, 402
SsiI	CCGC	9 cut(s)	66, 75, 78, 126, 384, 971, 1874, 2392, 2639
SspDI	GGCGCC	1 cut(s)	308
SspI	AATATT	1 cut(s)	2078
SspMI	CTAG	6 cut(s)	35, 1299, 1404, 1527, 2345, 2679
SstI	GAGCTC	2 cut(s)	28, 474
StuI	AGGCCT	2 cut(s)	117, 402
StyD4I	CCNGG	7 cut(s)	711, 792, 955, 1014, 1447, 2228, 2556
StyI	CCWWGG	1 cut(s)	2160
TaaI	ACNGT	3 cut(s)	925, 1105, 2370
TaiI	ACGT	5 cut(s)	96, 617, 830, 858, 1671
TatI	WGTACW	1 cut(s)	1959
TauI	GCSGC	1 cut(s)	80
TfiI	GAWTC	4 cut(s)	198, 548, 1823, 2759
Tru1I	TTAA	5 cut(s)	648, 1310, 1979, 2120, 2184
Tru9I	TTAA	5 cut(s)	648, 1310, 1979, 2120, 2184
TscAI	CASTG	9 cut(s)	481, 745, 1063, 1110, 1357, 1660, 2507, 2512, 2582
TseFI	GTSAC	5 cut(s)	493, 976, 1658, 1717, 2275
TseI	GCWGC	4 cut(s)	390, 503, 985, 2261
Tsp45I	GTSAC	5 cut(s)	493, 976, 1658, 1717, 2275
TspDTI	ATGAA	5 cut(s)	1060, 1477, 2379, 2610, 2682
TspGWI	ACGGA	2 cut(s)	1362, 1831
TspRI	CASTG	9 cut(s)	481, 745, 1063, 1110, 1357, 1660, 2507, 2512, 2582
Tth111I	GACNNNGTC	1 cut(s)	173
Van91I	CCANNNNNTGG	2 cut(s)	138, 1571
VpaK11BI	GGWCC	7 cut(s)	141, 743, 884, 903, 1134, 1876, 2561
XagI	CCTNNNNNAGG	1 cut(s)	1883
XapI	RAATTY	6 cut(s)	517, 1108, 1174, 1289, 1544, 1726
XbaI	TCTAGA	1 cut(s)	2344
XceI	RCATGY	2 cut(s)	1966, 2546
XhoI	CTCGAG	1 cut(s)	406
XmnI	GAANNNNTTC	2 cut(s)	734, 2418
XspI	CTAG	6 cut(s)	35, 1299, 1404, 1527, 2345, 2679
ZraI	GACGTC	1 cut(s)	94
Zsp2I	ATGCAT	1 cut(s)	2302

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.