Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0006862

Physical Location & Seq

Genomic Coordinates Reverse (-)

34930426 .. 34933453

Gene Structure 3028 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G015180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2652 bp

ATGGGTCCTCTGAAAACCCTACAAGCCCTCTTCCTCTTTCTACCCCTCCTCCTCATCTTCACCGCCGCCGACGACGCCGCCGTCATGTCCAAGCTCCTCGAGAACCTCAAACCCAGCGGCTGGTCCTCCTCCGCATCCTACTGCACCTGGGACGGCGTCAAATGCGACTCCGATACTTCCAAACGAGTCACCTCCATCAGCTTAGCCTCCAGCTCCCTCTCCGGCTCTCTCCCTTCAAATCTCAACGAACTCACCGAGCTCACCACTCTCTCTCTCCAAAGCAACGCTCTCTACGGCGCCTTACCTTCCCTCGCCAACCTCTCCAACCTCCAAGAAGTCTACCTCGACACCAATAACTTCACTTCCATTCCCGCCGGCTGCTTCGGAGGCTTGACCGGCTTGCAGACCTTGAGCATGAGCAACAATGTCGATCTTGCCCCTTGGGCGTTCCCATCTGAGCTCATCCAGTCTACCAGCCTGGTCACTCTTCAAGCAGGTAGCACCAACATGTATGGCGGCATTCCTGATATTTTCGGCTCTTTTGCAAACTTGCAAAATGTGAGATTGTCTTACAACAATCTTACCGGGCCTCTGCCCAAATCATTTTCTGGATCTGGGATTCAAAACCTCTGGATTAACAATCAGACCGTTGGGTTATCTGGTACCGTTGAGGTGCTGTCCAACATGACTTCGTTGATTCAAGCGTGGCTGCATAAGAATCAGTTCACTGGTACGATCCCGGACCTTTCGCAATGTACTGCTCTCTCTGATCTTCTGCTTCGTGACAATGTCTTTACTGGGATGGTGCCGGCGACGTTGACGGCGTTGTCTTCTTTGCAAAATGTTTCTTTGGACAACAATAAGCTTCAGGGTCCTATACCGGAGTTGGGGTCCAAGGTGAAGCTCACTTTTGATGGTAATAGCTTTTGCAAAACCACTGCTGGGCCCTGTGATCCACAGGTCACTACGCTGCTTCAGGTTGCAGGGGCTTTCGGGTACCCGGAATTATTGGCTGAGTCTTGGACAGGAGACGATGCATGCGGAGGGTGGAGCTTCGTTATTTGTGATGCTCAGAAGGTAGTTAATACAGTGAATCTGGACAACAAGCATCTCAATGGGACTATTTCACCTGCCTTTGCCAACCTCACATCGTTGAAAACTTTGGTGCTGAAAAACAACAACTTGACGGGTCCGATACCGGCTCGCCTGACAACATTACCTCAGCTGGCGGTTTTTGATGCTTCCAATAACAATTTATATGGGGACATTCCAAAATTTTCTTCTGGGGTGAAGGGAGGGAGTCCGTCTCCATCATCCAACGGTTCTTCAGTGTCGCCCGGTATGATTGCTGGTATAGTTATTGCTGTTGCTATTTTCATTGGAGTGTTGTTGTTTGTATTCCTCAAATGTTATTTGAGTAAAAGGCATAGGAAGTTTGGAAGAGTGGATAATACGCTGAATGGAATTGAAATTGCTAAGGGCAACGTGACCAGTTGTGCAAATGGGTACAATGGAGTTGCAAATGAGTTGCATAGCCAGAGCAGGGGTGACCTTCATGTTTCTGTGGGTGGAAATGTCGCCATTTCAATCCTAGTTCTTAGACAAGTGACAAACAATTTTAGTGAGGATAATATATTGGGTAGAGGAGGATTTGGCGTTGTTTATAAAGGTGAGCTACATGATGGGACTAAAATTGCTGTGAAAAAGATGGAATCTGTGGCAGTGGGTACTAAGGGACTGATGAATGGGTTTCAAGCAGAAATTTCAGTCCTCACTAGGGTTAGGCATAGGCATTTGGTTGCTCTGTTAGGATATTGCATTAATGGTAATGAGAGACTTCTAGTGTACGAGTACATGGCACAAGGAACGTTGACACAACATTTGTTTGATTGGCGGGAGAATGGGGTAACTCCTCTTACTTGGAAGCAGAGAGTGACAATAGCTTTGGATGTGGCAAGAGGATTGGAATATCTACACAGCTTAGCTCAACAAAGTTTCATTCACAGAGATTTGAAACCTTCAAATATACTTCTTGGGGATGCCATGAGGGCGAAGGTTGCGGCCTTTGGTTTGGTTAAAAACGCCCCCGACGGAAAGTATTCGGTTGAGACAAGAGTGGCAGGGACATTCGGGTATATTGCACCAGAATATGCAGCTACCGGCAAAGTGACAACAAAGGTGGATGTTTATGCATTTGGAGTAGTGTTGATGGAGTTGATGAGTGGTCGAAAAGCTGTAGATGATACCATGCCAGATGAAAGGTCTCATTTGGTCTCATGGTTTCGCAGAGTCCTTGTCAACAAAGAAAACATTCGCAACTCCATCGACCAAACTCTTGACGCTAATGAGGAGACAATGGAGAGCATATACAAAGTTGCTGAGCTTGCAGAACACTGCACAGCTCCTGAGTCATATCAGAGACCAGACATGGGCCATGCAGTCAAGATCTTGGGTCCTCTTGTTGAGCACTGGAGACCTACAACCCACGAAGAAGAAGATGAAGGTAGTTCAAGGATGTTTGATGATCTGTCCTATATGCACATGAACCTTTCTCAAGCAGCGGAAAGATGGCAAGCCGATGAAGGTACTTCAAGGATGTTTGTTGATCAGTCCTCTAGCCATACTCAATCAAGCATCCATTCAAACCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

883

Amino Acids

95.46

Weight (kDa)

5.98

Isoelectric Point (pI)

37.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	108 - 142	2.3e-06	Leucine rich repeat
Pkinase	PF00069	541 - 814	1.5e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	543 - 813	5.2e-45	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006862)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23750
fragaria_vesca	FvH4_4g13110 FvH4_4g13110
malus_domestica	MD04G1019100.v1.1
prunus_persica	Prupe.1G168400_v2.0.a1 Prupe.1G168500_v2.0.a1 Prupe.1G168500_v2.0.a1
pyrus_communis	pycom04g01540 pycom13g29180
rosa_chinensis	RchiOBHm_Chr4g0412891 RchiOBHm_Chr4g0413671
rosa_laevigata	RLG00000008202 RLG00000008250
rosa_multiflora	Rmu_sc0004133.1_g000014 Rmu_sc0005621.1_g000017 Rmu_sc0012279.1_g000002
rosa_roxburghii	Rroxscaffold_5G00357130
rosa_rugosa	Rorug04G0117300
rosa_samantha	Rh4AG176200 Rh4AG181600 Rh4BG176600 Rh4CG187200 Rh4DG173400 Rh4DG177100
rosa_wichuraiana	Rw4G014790 Rw4G015180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1665
AarI	CACCTGC	1 cut(s)	1138
AasI	GACNNNNNNGTC	2 cut(s)	80, 826
Acc36I	ACCTGC	2 cut(s)	485, 1138
Acc65I	GGTACC	2 cut(s)	662, 996
AccB1I	GGYRCC	4 cut(s)	296, 662, 805, 996
AccB7I	CCANNNNNTGG	1 cut(s)	120
AccI	GTMKAC	2 cut(s)	339, 470
AclI	AACGTT	1 cut(s)	1868
AclWI	GGATC	3 cut(s)	619, 730, 947
AcsI	RAATTY	2 cut(s)	1274, 1761
AcuI	CTGAAG	3 cut(s)	851, 959, 1311
AcyI	GRCGYC	3 cut(s)	75, 156, 297
AfaI	GTAC	9 cut(s)	664, 733, 757, 998, 1508, 1729, 1847, 1853, 2587
AfiI	CCNNNNNNNGG	6 cut(s)	120, 887, 942, 1543, 1777, 2429
AflIII	ACRYGT	1 cut(s)	507
AjnI	CCWGG	2 cut(s)	146, 477
AjuI	GAANNNNNNNTTGG	2 cut(s)	1264, 1296
Alw21I	GWGCWC	3 cut(s)	261, 462, 2469
Alw26I	GTCTC	9 cut(s)	1023, 1311, 1828, 2102, 2268, 2278, 2345, 2413, 2467
AlwI	GGATC	3 cut(s)	619, 730, 947
AlwNI	CAGNNNCTG	2 cut(s)	120, 2405
Ama87I	CYCGRG	1 cut(s)	98
AoxI	GGCC	4 cut(s)	587, 944, 2061, 2431
ApaI	GGGCCC	1 cut(s)	948
ApeKI	GCWGC	5 cut(s)	378, 709, 970, 2153, 2558
ApoI	RAATTY	2 cut(s)	1274, 1761
ArsI	GACNNNNNNTTYG	4 cut(s)	1864, 1896, 1927, 1959
AseI	ATTAAT	1 cut(s)	1821
Asp700I	GAANNNNTTC	3 cut(s)	722, 2098, 2310
Asp718I	GGTACC	2 cut(s)	662, 996
AspLEI	GCGC	1 cut(s)	299
AsuC2I	CCSGG	4 cut(s)	586, 740, 1001, 1338
AsuHPI	GGTGA	9 cut(s)	52, 181, 244, 253, 910, 1119, 1300, 1559, 1682
AvaI	CYCGRG	1 cut(s)	98
AvaII	GGWCC	7 cut(s)	5, 123, 742, 872, 891, 1190, 2453
BaeGI	GKGCMC	1 cut(s)	948
BanI	GGYRCC	4 cut(s)	296, 662, 805, 996
BanII	GRGCYC	3 cut(s)	261, 462, 948
BbsI	GAAGAC	1 cut(s)	822
Bbv12I	GWGCWC	3 cut(s)	261, 462, 2469
BbvCI	CCTCAGC	1 cut(s)	1221
BbvI	GCAGC	5 cut(s)	365, 696, 957, 2165, 2570
BceAI	ACGGC	4 cut(s)	65, 169, 310, 837
BcgI	CGANNNNNNTGC	4 cut(s)	409, 443, 2305, 2339
BciT130I	CCWGG	2 cut(s)	148, 479
BclI	TGATCA	1 cut(s)	2605
BcnI	CCSGG	4 cut(s)	586, 740, 1001, 1338
BcoDI	GTCTC	9 cut(s)	1023, 1311, 1828, 2102, 2268, 2278, 2345, 2413, 2467
BfaI	CTAG	4 cut(s)	1592, 1776, 1841, 2616
BfmI	CTRYAG	1 cut(s)	2235
BfoI	RGCGCY	1 cut(s)	300
BfuAI	ACCTGC	2 cut(s)	485, 1138
BglI	GCCNNNNNGGC	2 cut(s)	443, 2048
BglII	AGATCT	1 cut(s)	2445
BlpI	GCTNAGC	3 cut(s)	202, 1981, 2379
Bme1390I	CCNGG	6 cut(s)	148, 479, 586, 740, 1001, 1338
Bme18I	GGWCC	7 cut(s)	5, 123, 742, 872, 891, 1190, 2453
BmeT110I	CYCGRG	1 cut(s)	98
BmrFI	CCNGG	6 cut(s)	148, 479, 586, 740, 1001, 1338
BmrI	ACTGGG	1 cut(s)	807
BmsI	GCATC	7 cut(s)	143, 1024, 1057, 1117, 1228, 2029, 2643
BmuI	ACTGGG	1 cut(s)	807
BpiI	GAAGAC	1 cut(s)	822
BplI	GAGNNNNNCTC	2 cut(s)	1291, 1323
BpmI	CTGGAG	2 cut(s)	193, 2491
Bpu10I	CCTNAGC	2 cut(s)	1221, 1476
Bpu1102I	GCTNAGC	3 cut(s)	202, 1981, 2379
BpuEI	CTTGAG	2 cut(s)	430, 2538
BpuMI	CCSGG	4 cut(s)	586, 740, 1001, 1338
BsaHI	GRCGYC	3 cut(s)	75, 156, 297
BsaI	GGTCTC	4 cut(s)	2268, 2278, 2413, 2467
BsaJI	CCNNGG	3 cut(s)	147, 440, 894
BsaWI	WCCGGW	1 cut(s)	880
BsaXI	ACNNNNNCTCC	4 cut(s)	33, 63, 875, 905
Bsc4I	CCNNNNNNNGG	6 cut(s)	120, 887, 942, 1543, 1777, 2429
Bse118I	RCCGGY	5 cut(s)	374, 395, 808, 1198, 2159
Bse1I	ACTGG	5 cut(s)	466, 733, 802, 1491, 2474
Bse3DI	GCAATG	1 cut(s)	758
BseBI	CCWGG	2 cut(s)	148, 479
BseDI	CCNNGG	3 cut(s)	147, 440, 894
BseLI	CCNNNNNNNGG	6 cut(s)	120, 887, 942, 1543, 1777, 2429
BseMI	GCAATG	1 cut(s)	758
BseMII	CTCAG	6 cut(s)	447, 1005, 1085, 1235, 2370, 2397
BseNI	ACTGG	5 cut(s)	466, 733, 802, 1491, 2474
BseRI	GAGGAG	7 cut(s)	38, 41, 86, 118, 1659, 1902, 2363
BseSI	GKGCMC	1 cut(s)	948
BseXI	GCAGC	5 cut(s)	365, 696, 957, 2165, 2570
BseYI	CCCAGC	2 cut(s)	113, 941
BsgI	GTGCAG	2 cut(s)	127, 2380
BshFI	GGCC	4 cut(s)	589, 946, 2063, 2433
BshNI	GGYRCC	4 cut(s)	296, 662, 805, 996
BsiHKAI	GWGCWC	3 cut(s)	261, 462, 2469
BsiHKCI	CYCGRG	1 cut(s)	98
BslFI	GGGAC	6 cut(s)	164, 1132, 1277, 1699, 1749, 2137
BslI	CCNNNNNNNGG	6 cut(s)	120, 887, 942, 1543, 1777, 2429
BsmAI	GTCTC	9 cut(s)	1023, 1311, 1828, 2102, 2268, 2278, 2345, 2413, 2467
BsmBI	CGTCTC	2 cut(s)	1023, 1311
BsmFI	GGGAC	6 cut(s)	164, 1132, 1277, 1699, 1749, 2137
BsmI	GAATGC	1 cut(s)	519
BsnI	GGCC	4 cut(s)	589, 946, 2063, 2433
Bso31I	GGTCTC	4 cut(s)	2268, 2278, 2413, 2467
BsoBI	CYCGRG	1 cut(s)	98
Bsp120I	GGGCCC	1 cut(s)	944
Bsp1286I	GDGCHC	4 cut(s)	261, 462, 948, 2469
Bsp143I	GATC	8 cut(s)	430, 611, 735, 769, 952, 2445, 2524, 2605
Bsp1720I	GCTNAGC	3 cut(s)	202, 1981, 2379
BspANI	GGCC	4 cut(s)	589, 946, 2063, 2433
BspCNI	CTCAG	6 cut(s)	448, 1006, 1084, 1234, 2371, 2398
BspMI	ACCTGC	2 cut(s)	485, 1138
BspPI	GGATC	3 cut(s)	619, 730, 947
BspT107I	GGYRCC	4 cut(s)	296, 662, 805, 996
BspTNI	GGTCTC	4 cut(s)	2268, 2278, 2413, 2467
BsrDI	GCAATG	1 cut(s)	758
BsrFI	RCCGGY	5 cut(s)	374, 395, 808, 1198, 2159
BsrI	ACTGG	5 cut(s)	466, 733, 802, 1491, 2474
BssAI	RCCGGY	5 cut(s)	374, 395, 808, 1198, 2159
BssECI	CCNNGG	3 cut(s)	147, 440, 894
BssMI	GATC	8 cut(s)	430, 611, 735, 769, 952, 2445, 2524, 2605
BssNI	GRCGYC	3 cut(s)	75, 156, 297
BssT1I	CCWWGG	2 cut(s)	440, 894
Bst2UI	CCWGG	2 cut(s)	148, 479
Bst4CI	ACNGT	4 cut(s)	649, 667, 1090, 1322
Bst6I	CTCTTC	3 cut(s)	35, 492, 1435
BstACI	GRCGYC	3 cut(s)	75, 156, 297
BstC8I	GCNNGC	8 cut(s)	376, 401, 810, 1039, 1204, 1227, 2385, 2574
BstEII	GGTNACC	1 cut(s)	1547
BstH2I	RGCGCY	1 cut(s)	300
BstHHI	GCGC	1 cut(s)	299
BstKTI	GATC	8 cut(s)	433, 614, 738, 772, 955, 2448, 2527, 2608
BstMAI	GTCTC	9 cut(s)	1023, 1311, 1828, 2102, 2268, 2278, 2345, 2413, 2467
BstMBI	GATC	8 cut(s)	430, 611, 735, 769, 952, 2445, 2524, 2605
BstMWI	GCNNNNNNNGC	8 cut(s)	74, 162, 387, 396, 443, 2048, 2057, 2384
BstNI	CCWGG	2 cut(s)	148, 479
BstNSI	RCATGY	2 cut(s)	511, 1041
BstPI	GGTNACC	1 cut(s)	1547
BstSCI	CCNGG	6 cut(s)	146, 477, 584, 738, 999, 1336
BstSFI	CTRYAG	1 cut(s)	2235
BstSLI	GKGCMC	1 cut(s)	948
BstV1I	GCAGC	5 cut(s)	365, 696, 957, 2165, 2570
BstV2I	GAAGAC	1 cut(s)	822
BstX2I	RGATCY	2 cut(s)	611, 2445
BstYI	RGATCY	2 cut(s)	611, 2445
BsuRI	GGCC	4 cut(s)	589, 946, 2063, 2433
BtsI	GCAGTG	3 cut(s)	936, 1728, 2392
BtsIMutI	CAGTG	7 cut(s)	726, 936, 1095, 1335, 1728, 2392, 2467
BveI	ACCTGC	2 cut(s)	485, 1138
Cac8I	GCNNGC	8 cut(s)	376, 401, 810, 1039, 1204, 1227, 2385, 2574
CaiI	CAGNNNCTG	2 cut(s)	120, 2405
CfoI	GCGC	1 cut(s)	299
Cfr10I	RCCGGY	5 cut(s)	374, 395, 808, 1198, 2159
CseI	GACGC	3 cut(s)	83, 145, 2348
Csp6I	GTAC	9 cut(s)	663, 732, 756, 997, 1507, 1728, 1846, 1852, 2586
CspCI	CAANNNNNGTGG	2 cut(s)	2160, 2195
CviQI	GTAC	9 cut(s)	663, 732, 756, 997, 1507, 1728, 1846, 1852, 2586
DinI	GGCGCC	1 cut(s)	298
DpnI	GATC	8 cut(s)	432, 613, 737, 771, 954, 2447, 2526, 2607
DpnII	GATC	8 cut(s)	430, 611, 735, 769, 952, 2445, 2524, 2605
DrdI	GACNNNNNNGTC	2 cut(s)	80, 826
DseDI	GACNNNNNNGTC	2 cut(s)	80, 826
Eam1104I	CTCTTC	3 cut(s)	35, 492, 1435
EarI	CTCTTC	3 cut(s)	35, 492, 1435
Ecl136II	GAGCTC	2 cut(s)	259, 460
Eco130I	CCWWGG	2 cut(s)	440, 894
Eco24I	GRGCYC	3 cut(s)	261, 462, 948
Eco31I	GGTCTC	4 cut(s)	2268, 2278, 2413, 2467
Eco47I	GGWCC	7 cut(s)	5, 123, 742, 872, 891, 1190, 2453
Eco53kI	GAGCTC	2 cut(s)	259, 460
Eco57I	CTGAAG	3 cut(s)	851, 959, 1311
Eco88I	CYCGRG	1 cut(s)	98
Eco91I	GGTNACC	1 cut(s)	1547
EcoICRI	GAGCTC	2 cut(s)	259, 460
EcoO109I	RGGNCCY	4 cut(s)	5, 872, 945, 2453
EcoO65I	GGTNACC	1 cut(s)	1547
EcoRII	CCWGG	2 cut(s)	146, 477
EcoT14I	CCWWGG	2 cut(s)	440, 894
EcoT22I	ATGCAT	2 cut(s)	1039, 2194
EcoT38I	GRGCYC	3 cut(s)	261, 462, 948
EgeI	GGCGCC	1 cut(s)	298
EheI	GGCGCC	1 cut(s)	298
ErhI	CCWWGG	2 cut(s)	440, 894
Esp3I	CGTCTC	2 cut(s)	1023, 1311
FaqI	GGGAC	6 cut(s)	164, 1132, 1277, 1699, 1749, 2137
FauI	CCCGC	2 cut(s)	379, 1887
FbaI	TGATCA	1 cut(s)	2605
FblI	GTMKAC	2 cut(s)	339, 470
FriOI	GRGCYC	3 cut(s)	261, 462, 948
FspBI	CTAG	4 cut(s)	1592, 1776, 1841, 2616
GlaI	GCGC	1 cut(s)	298
GsaI	CCCAGC	2 cut(s)	117, 945
GsuI	CTGGAG	2 cut(s)	193, 2491
HaeII	RGCGCY	1 cut(s)	300
HaeIII	GGCC	4 cut(s)	589, 946, 2063, 2433
HgaI	GACGC	3 cut(s)	83, 145, 2348
HhaI	GCGC	1 cut(s)	299
Hin1I	GRCGYC	3 cut(s)	75, 156, 297
Hin6I	GCGC	1 cut(s)	297
HinP1I	GCGC	1 cut(s)	297
HincII	GTYRAC	3 cut(s)	819, 1872, 2299
HindII	GTYRAC	3 cut(s)	819, 1872, 2299
HindIII	AAGCTT	1 cut(s)	863
HphI	GGTGA	9 cut(s)	52, 181, 244, 253, 910, 1119, 1300, 1559, 1682
Hpy166II	GTNNAC	7 cut(s)	340, 471, 726, 819, 1846, 1872, 2299
Hpy188I	TCNGA	9 cut(s)	12, 172, 386, 457, 645, 769, 1074, 1194, 2418
Hpy188III	TCNNGA	9 cut(s)	100, 524, 609, 631, 782, 1097, 2336, 2405, 2443
Hpy8I	GTNNAC	7 cut(s)	340, 471, 726, 819, 1846, 1872, 2299
Hpy99I	CGWCG	4 cut(s)	74, 77, 817, 2093
HpyAV	CCTTC	9 cut(s)	243, 315, 1069, 1285, 1562, 2028, 2047, 2495, 2576
HpyCH4III	ACNGT	4 cut(s)	649, 667, 1090, 1322
HpyCH4IV	ACGT	3 cut(s)	815, 1485, 1868
HpyF10VI	GCNNNNNNNGC	8 cut(s)	74, 162, 387, 396, 443, 2048, 2057, 2384
HpySE526I	ACGT	3 cut(s)	815, 1485, 1868
Hsp92I	GRCGYC	3 cut(s)	75, 156, 297
HspAI	GCGC	1 cut(s)	297
KasI	GGCGCC	1 cut(s)	296
KpnI	GGTACC	2 cut(s)	666, 1000
KroI	GCCGGC	2 cut(s)	374, 808
KroNI	GCCGGC	2 cut(s)	376, 810
Ksp22I	TGATCA	1 cut(s)	2605
Kzo9I	GATC	8 cut(s)	430, 611, 735, 769, 952, 2445, 2524, 2605
LmnI	GCTCC	4 cut(s)	99, 218, 1050, 2407
Lsp1109I	GCAGC	5 cut(s)	365, 696, 957, 2165, 2570
LweI	GCATC	7 cut(s)	143, 1024, 1057, 1117, 1228, 2029, 2643
MaeI	CTAG	4 cut(s)	1592, 1776, 1841, 2616
MaeII	ACGT	3 cut(s)	815, 1485, 1868
MalI	GATC	8 cut(s)	432, 613, 737, 771, 954, 2447, 2526, 2607
MboI	GATC	8 cut(s)	430, 611, 735, 769, 952, 2445, 2524, 2605
MflI	RGATCY	2 cut(s)	611, 2445
MhlI	GDGCHC	4 cut(s)	261, 462, 948, 2469
MluCI	AATT	8 cut(s)	1004, 1252, 1274, 1464, 1470, 1615, 1692, 1761
Mly113I	GGCGCC	1 cut(s)	297
MlyI	GAGTC	6 cut(s)	161, 195, 1025, 1309, 2298, 2417
MmeI	TCCRAC	3 cut(s)	348, 705, 1341
Mph1103I	ATGCAT	2 cut(s)	1039, 2194
MroNI	GCCGGC	2 cut(s)	374, 808
MroXI	GAANNNNTTC	3 cut(s)	722, 2098, 2310
MseI	TTAA	4 cut(s)	636, 1083, 1821, 2076
MslI	CAYNNNNRTG	3 cut(s)	506, 1113, 1382
MspA1I	CMGCKG	3 cut(s)	117, 1225, 2561
MspR9I	CCNGG	6 cut(s)	148, 479, 586, 740, 1001, 1338
Mva1269I	GAATGC	1 cut(s)	519
MvaI	CCWGG	2 cut(s)	148, 479
MwoI	GCNNNNNNNGC	8 cut(s)	74, 162, 387, 396, 443, 2048, 2057, 2384
NaeI	GCCGGC	2 cut(s)	376, 810
NarI	GGCGCC	1 cut(s)	297
NciI	CCSGG	4 cut(s)	586, 740, 1001, 1338
NdeII	GATC	8 cut(s)	430, 611, 735, 769, 952, 2445, 2524, 2605
NgoMIV	GCCGGC	2 cut(s)	374, 808
NmuCI	GTSAC	9 cut(s)	187, 481, 782, 961, 1486, 1547, 1606, 1933, 2167
NsiI	ATGCAT	2 cut(s)	1039, 2194
NspI	RCATGY	2 cut(s)	511, 1041
PaeI	GCATGC	1 cut(s)	1041
PaeR7I	CTCGAG	1 cut(s)	98
PaqCI	CACCTGC	1 cut(s)	1138
PciI	ACATGT	1 cut(s)	507
PcsI	WCGNNNNNNNCGW	3 cut(s)	78, 252, 821
PctI	GAATGC	1 cut(s)	519
PdiI	GCCGGC	2 cut(s)	376, 810
PdmI	GAANNNNTTC	3 cut(s)	722, 2098, 2310
PfeI	GAWTC	5 cut(s)	619, 697, 718, 1093, 1712
PflFI	GACNNNGTC	2 cut(s)	155, 788
PflMI	CCANNNNNTGG	1 cut(s)	120
PfoI	TCCNGGA	1 cut(s)	738
PleI	GAGTC	6 cut(s)	161, 194, 1024, 1308, 2297, 2416
PluTI	GGCGCC	1 cut(s)	300
PpsI	GAGTC	6 cut(s)	161, 194, 1024, 1308, 2297, 2416
PpuMI	RGGWCCY	3 cut(s)	5, 872, 2453
PscI	ACATGT	1 cut(s)	507
PshBI	ATTAAT	1 cut(s)	1821
PsiI	TTATAA	1 cut(s)	1665
Psp124BI	GAGCTC	2 cut(s)	261, 462
Psp1406I	AACGTT	1 cut(s)	1868
Psp5II	RGGWCCY	3 cut(s)	5, 872, 2453
Psp6I	CCWGG	2 cut(s)	146, 477
PspEI	GGTNACC	1 cut(s)	1547
PspFI	CCCAGC	2 cut(s)	113, 941
PspGI	CCWGG	2 cut(s)	146, 477
PspOMI	GGGCCC	1 cut(s)	944
PspPPI	RGGWCCY	3 cut(s)	5, 872, 2453
PstNI	CAGNNNCTG	2 cut(s)	120, 2405
PsuI	RGATCY	2 cut(s)	611, 2445
PsyI	GACNNNGTC	2 cut(s)	155, 788
PvuII	CAGCTG	1 cut(s)	1225
RsaI	GTAC	9 cut(s)	664, 733, 757, 998, 1508, 1729, 1847, 1853, 2587
RsaNI	GTAC	9 cut(s)	663, 732, 756, 997, 1507, 1728, 1846, 1852, 2586
RseI	CAYNNNNRTG	3 cut(s)	506, 1113, 1382
SacI	GAGCTC	2 cut(s)	261, 462
SaqAI	TTAA	4 cut(s)	636, 1083, 1821, 2076
Sau3AI	GATC	8 cut(s)	430, 611, 735, 769, 952, 2445, 2524, 2605
SchI	GAGTC	6 cut(s)	161, 195, 1025, 1309, 2298, 2417
ScrFI	CCNGG	6 cut(s)	148, 479, 586, 740, 1001, 1338
SduI	GDGCHC	4 cut(s)	261, 462, 948, 2469
SfaNI	GCATC	7 cut(s)	143, 1024, 1057, 1117, 1228, 2029, 2643
SfcI	CTRYAG	1 cut(s)	2235
SfoI	GGCGCC	1 cut(s)	298
Sfr274I	CTCGAG	1 cut(s)	98
SinI	GGWCC	7 cut(s)	5, 123, 742, 872, 891, 1190, 2453
SlaI	CTCGAG	1 cut(s)	98
SmiMI	CAYNNNNRTG	3 cut(s)	506, 1113, 1382
SmlI	CTYRAG	3 cut(s)	98, 409, 2553
SmoI	CTYRAG	3 cut(s)	98, 409, 2553
SphI	GCATGC	1 cut(s)	1041
Sse9I	AATT	8 cut(s)	1004, 1252, 1274, 1464, 1470, 1615, 1692, 1761
SspDI	GGCGCC	1 cut(s)	296
SspMI	CTAG	4 cut(s)	1592, 1776, 1841, 2616
SstI	GAGCTC	2 cut(s)	261, 462
StyD4I	CCNGG	6 cut(s)	146, 477, 584, 738, 999, 1336
StyI	CCWWGG	2 cut(s)	440, 894
TaaI	ACNGT	4 cut(s)	649, 667, 1090, 1322
TaiI	ACGT	3 cut(s)	818, 1488, 1871
TaqI	TCGA	5 cut(s)	99, 345, 429, 2227, 2325
TasI	AATT	8 cut(s)	1004, 1252, 1274, 1464, 1470, 1615, 1692, 1761
TatI	WGTACW	2 cut(s)	755, 1851
TauI	GCSGC	5 cut(s)	68, 80, 120, 519, 2063
TfiI	GAWTC	5 cut(s)	619, 697, 718, 1093, 1712
Tru1I	TTAA	4 cut(s)	636, 1083, 1821, 2076
Tru9I	TTAA	4 cut(s)	636, 1083, 1821, 2076
TscAI	CASTG	7 cut(s)	733, 943, 1095, 1335, 1728, 2399, 2474
TseFI	GTSAC	9 cut(s)	187, 481, 782, 961, 1486, 1547, 1606, 1933, 2167
TseI	GCWGC	5 cut(s)	378, 709, 970, 2153, 2558
Tsp45I	GTSAC	9 cut(s)	187, 481, 782, 961, 1486, 1547, 1606, 1933, 2167
TspDTI	ATGAA	8 cut(s)	1366, 1544, 1757, 1987, 2271, 2514, 2558, 2595
TspGWI	ACGGA	2 cut(s)	1293, 2106
TspRI	CASTG	7 cut(s)	733, 943, 1095, 1335, 1728, 2399, 2474
Tth111I	GACNNNGTC	2 cut(s)	155, 788
Van91I	CCANNNNNTGG	1 cut(s)	120
VpaK11BI	GGWCC	7 cut(s)	5, 123, 742, 872, 891, 1190, 2453
VspI	ATTAAT	1 cut(s)	1821
XapI	RAATTY	2 cut(s)	1274, 1761
XceI	RCATGY	2 cut(s)	511, 1041
XhoI	CTCGAG	1 cut(s)	98
XmiI	GTMKAC	2 cut(s)	339, 470
XmnI	GAANNNNTTC	3 cut(s)	722, 2098, 2310
XspI	CTAG	4 cut(s)	1592, 1776, 1841, 2616
Zsp2I	ATGCAT	2 cut(s)	1039, 2194

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.