Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0012279.1

Orthogroup ID

OG0006862

Physical Location & Seq

Genomic Coordinates Forward (+)

12378 .. 15398

Gene Structure 3021 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0012279.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2718 bp

atgggtcctgtgaaaaccctacaagccctcttcctctttctacccgtcctcctcatcttcaccgccgccgacgacgccgccgtcatgtccaagctcctcgagaacctcaaacccagcggctggtcctcctccgcatcctactgcacctgggacggcgtcaaatgcgactccgatacttccaaacgagtcacctccatcagcttagcctccagctccctctccggctctctcccttcaaatctcaacgaactcaccaagctcaccactctctctctccaaagcaacactctctccggcgccttaccttccctcgccaacctctccaacctccaagaagtctacctcgacaccaataacttcacttccattccccccggctgcttcgaaggcttgaccggcttgcagaccttgagcatgagcaacaatgtcgatcttgccccgtgggcgttcccatctgggctcatccagtctaccagcctggtcactcttcaagcaggtagcaccaacatgtatggcggcattcctgatattttcggctcttttgcaaacttgcaaaatgtgagattgtcttacaacaaccttaccgggcctctgcccaaatcattttctggatctgggattcaaaacctctggattaacaatcaggccgttgggttatctggtaccgttgaggtgctgtccaacatgacttcgttgattcaagcgtggctgcataagaatcagttcactggtacgatcccggacctttcgcaatgtattgctctctttgatcttcagcttcgtgacaatgtctttactgggatggtgccggcgacgttgacggcgttgtcttctttgcaaaatgtttctttggacaacaataagcttcagggtcctatgccggagtttgggtccaaggtgaagaaggccacttttgatggtaatagcttttgcaaaaccactgctgggccttgtgatccacaggtcactacgctgcttcaggttgcaggggctttcgggtacccggaattattggctgagtcttggacaggagacaatgcatgcggagggtggagcttcgttatttgtgatgctcagaaggtagttaatacagtgaatctggacaacaagcatctcaatgggactatttcacctgcctttgccaacctcacatcgttgaaaactttggtgctgaaaaacaacaacttgacgggtccgataccggctagcctgacaacattacctcagctggcggtttttgatgcttccaataacaatttatatggggacattccgaaatttccttctgcggtgaagttgactaccagtggtaatccattgattgggactacgccgagctctggaggtggagggagtgcacctcctggtaacaactcaactgcaccgggtatgattgctggtatagttattgctgttgctattttcattggagtgttgttgtttgtattcatcaaatgttatttgagtaaaaggcataggaagtttggaagagtggataatacgctgaatggaattgaaattgccaagagtgacgtgaccagttgtgcaaatgggtacaatggagttgcaagtgagttgcatagccagagcagtggtgaccttcatgtgtttgagggtggaaatgtcgccatttcgatccaagttcttagacaagtgacaaacaattttagtgaggataatatattgggtagaggaggatttggagttgtttataaaggtgaattgcatgatgggactaaaattgctgttaaaaggatggaatctgtggcagtgggtactaagggattgaatgagtttcaagcagaaattgcagtcctcactaaggttaggcataggcatttggttgctctgttaggatattgcattaatggtaatgagagacttttagtgtacgagtacatgccacaaggaacgttgacacaacatttgtttgattggcgagagaatgaggtaactcctcttacttggaagcagagagtgacaatagctttggatgtggcaagaggagtggaatatctacacagcttagctcagcaaagtttcattcacagagatttgaaaccttcaaatatacttcttggtgatgacatgagggcgaaggttgcggactttggtttggttaaaaatgcccccgacggaaagtattcagttgagacacgattggcagggacatttgggtatcttgcaccagaatatgcagctactggcagagtgacaacaaaggtggatgtttatgcatttggagtggtgttgatggagttgatgagtggtcgaaaagctctagatgataccatgccagatgaaaggtctcatttggtctcatggtttcgcagagtccttgtcaacaaagaaaacatccccaagtccatcgacgaaactcttgaccctgatgaggagacaatggagagcatatacaaagttgccgagcttgcgggacactgcacagctcgtgagccatatcagagaccagacatgggccatgcagtcaacatcttgggtcctcttgttgagcactggaaacctacaacccatgaagaagaagatgaaaacagtggcattaacatgcacatgaacctttcacaagcagtgcaaagatggcaagctgatgaaggtacttcaaggatgtttgatgatctgtcctatagccatactcaatcaagcatcccttcaaaaccttccgggtttgcagactcatttgattcaatggactgccgatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

905

Amino Acids

97.78

Weight (kDa)

5.63

Isoelectric Point (pI)

36.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006862)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23750
fragaria_vesca	FvH4_4g13110 FvH4_4g13110
malus_domestica	MD04G1019100.v1.1
prunus_persica	Prupe.1G168400_v2.0.a1 Prupe.1G168500_v2.0.a1 Prupe.1G168500_v2.0.a1
pyrus_communis	pycom04g01540 pycom13g29180
rosa_chinensis	RchiOBHm_Chr4g0412891 RchiOBHm_Chr4g0413671
rosa_laevigata	RLG00000008202 RLG00000008250
rosa_multiflora	Rmu_sc0004133.1_g000014 Rmu_sc0005621.1_g000017 Rmu_sc0012279.1_g000002
rosa_roxburghii	Rroxscaffold_5G00357130
rosa_rugosa	Rorug04G0117300
rosa_samantha	Rh4AG176200 Rh4AG181600 Rh4BG176600 Rh4CG187200 Rh4DG173400 Rh4DG177100
rosa_wichuraiana	Rw4G014790 Rw4G015180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1713
AarI	CACCTGC	1 cut(s)	1141
AasI	GACNNNNNNGTC	2 cut(s)	80, 826
Acc36I	ACCTGC	2 cut(s)	485, 1141
Acc65I	GGTACC	2 cut(s)	662, 999
AccB1I	GGYRCC	4 cut(s)	296, 662, 805, 999
AccB7I	CCANNNNNTGG	2 cut(s)	120, 1322
AccI	GTMKAC	2 cut(s)	339, 470
AclI	AACGTT	1 cut(s)	1913
AclWI	GGATC	4 cut(s)	619, 730, 950, 1630
AcsI	RAATTY	1 cut(s)	1277
AcuI	CTGAAG	3 cut(s)	758, 851, 962
AcyI	GRCGYC	3 cut(s)	75, 156, 297
AfaI	GTAC	8 cut(s)	664, 733, 1001, 1556, 1777, 1892, 1898, 2614
AfiI	CCNNNNNNNGG	8 cut(s)	120, 887, 945, 1322, 1340, 1822, 2392, 2474
AflIII	ACRYGT	1 cut(s)	507
AjiI	CACGTC	1 cut(s)	1534
AjnI	CCWGG	3 cut(s)	146, 477, 1363
Alw21I	GWGCWC	3 cut(s)	1340, 1360, 2514
Alw26I	GTCTC	7 cut(s)	1026, 1873, 2147, 2313, 2323, 2390, 2458
Alw44I	GTGCAC	1 cut(s)	1356
AlwI	GGATC	4 cut(s)	619, 730, 950, 1630
AlwNI	CAGNNNCTG	2 cut(s)	120, 2204
Ama87I	CYCGRG	1 cut(s)	98
AoxI	GGCC	5 cut(s)	587, 645, 906, 947, 2476
ApaLI	GTGCAC	1 cut(s)	1356
ApeKI	GCWGC	4 cut(s)	378, 709, 973, 2198
ApoI	RAATTY	1 cut(s)	1277
ArsI	GACNNNNNNTTYG	4 cut(s)	1909, 1941, 1972, 2004
AseI	ATTAAT	1 cut(s)	1866
Asp700I	GAANNNNTTC	2 cut(s)	722, 2143
Asp718I	GGTACC	2 cut(s)	662, 999
AspLEI	GCGC	1 cut(s)	299
AsuC2I	CCSGG	6 cut(s)	375, 586, 740, 1004, 1386, 2680
AsuII	TTCGAA	1 cut(s)	384
AsuNHI	GCTAGC	1 cut(s)	1205
AvaI	CYCGRG	1 cut(s)	98
AvaII	GGWCC	7 cut(s)	5, 123, 742, 872, 891, 1193, 2498
BaeGI	GKGCMC	1 cut(s)	1360
BanI	GGYRCC	4 cut(s)	296, 662, 805, 999
BanII	GRGCYC	2 cut(s)	462, 1340
BauI	CACGAG	1 cut(s)	2448
BbsI	GAAGAC	1 cut(s)	822
Bbv12I	GWGCWC	3 cut(s)	1340, 1360, 2514
BbvCI	CCTCAGC	1 cut(s)	1224
BbvI	GCAGC	4 cut(s)	365, 696, 960, 2210
BccI	CCATC	9 cut(s)	203, 460, 796, 911, 1724, 1750, 2248, 2375, 2589
BceAI	ACGGC	4 cut(s)	65, 169, 632, 837
BcgI	CGANNNNNNTGC	2 cut(s)	409, 443
BciT130I	CCWGG	3 cut(s)	148, 479, 1365
BcnI	CCSGG	6 cut(s)	375, 586, 740, 1004, 1386, 2680
BcoDI	GTCTC	7 cut(s)	1026, 1873, 2147, 2313, 2323, 2390, 2458
BfaI	CTAG	2 cut(s)	1206, 2282
BfmI	CTRYAG	1 cut(s)	2641
BfoI	RGCGCY	1 cut(s)	300
BfuAI	ACCTGC	2 cut(s)	485, 1141
BglI	GCCNNNNNGGC	1 cut(s)	443
BisI	GCNGC	8 cut(s)	66, 78, 118, 379, 517, 710, 974, 2199
BlpI	GCTNAGC	3 cut(s)	202, 2026, 2031
BlsI	GCNGC	8 cut(s)	67, 79, 119, 380, 518, 711, 975, 2200
Bme1390I	CCNGG	9 cut(s)	148, 375, 479, 586, 740, 1004, 1365, 1386, 2680
Bme18I	GGWCC	7 cut(s)	5, 123, 742, 872, 891, 1193, 2498
BmeT110I	CYCGRG	1 cut(s)	98
BmgBI	CACGTC	1 cut(s)	1534
BmiI	GGNNCC	9 cut(s)	6, 298, 664, 807, 873, 892, 1001, 1194, 2499
BmrFI	CCNGG	9 cut(s)	148, 375, 479, 586, 740, 1004, 1365, 1386, 2680
BmrI	ACTGGG	1 cut(s)	807
BmsI	GCATC	5 cut(s)	143, 1060, 1120, 1231, 2670
BmtI	GCTAGC	1 cut(s)	1209
BmuI	ACTGGG	1 cut(s)	807
BpiI	GAAGAC	1 cut(s)	822
BplI	GAGNNNNNCTC	2 cut(s)	1345, 1377
BpmI	CTGGAG	2 cut(s)	193, 1362
Bpu10I	CCTNAGC	1 cut(s)	1224
Bpu1102I	GCTNAGC	3 cut(s)	202, 2026, 2031
Bpu14I	TTCGAA	1 cut(s)	384
BpuEI	CTTGAG	1 cut(s)	430
BpuMI	CCSGG	6 cut(s)	375, 586, 740, 1004, 1386, 2680
BsaHI	GRCGYC	3 cut(s)	75, 156, 297
BsaI	GGTCTC	3 cut(s)	2313, 2323, 2458
BsaJI	CCNNGG	4 cut(s)	147, 373, 440, 894
BsaXI	ACNNNNNCTCC	6 cut(s)	33, 63, 275, 305, 875, 905
Bsc4I	CCNNNNNNNGG	8 cut(s)	120, 887, 945, 1322, 1340, 1822, 2392, 2474
Bse118I	RCCGGY	3 cut(s)	395, 808, 1201
Bse1I	ACTGG	7 cut(s)	466, 733, 802, 1305, 1539, 2209, 2519
Bse3DI	GCAATG	1 cut(s)	758
BseBI	CCWGG	3 cut(s)	148, 479, 1365
BseDI	CCNNGG	4 cut(s)	147, 373, 440, 894
BseGI	GGATG	9 cut(s)	134, 462, 807, 1761, 1999, 2233, 2355, 2628, 2661
BseLI	CCNNNNNNNGG	8 cut(s)	120, 887, 945, 1322, 1340, 1822, 2392, 2474
BseMI	GCAATG	1 cut(s)	758
BseMII	CTCAG	4 cut(s)	1008, 1088, 1238, 2045
BseNI	ACTGG	7 cut(s)	466, 733, 802, 1305, 1539, 2209, 2519
BseRI	GAGGAG	7 cut(s)	41, 86, 118, 1707, 1947, 2019, 2408
BseSI	GKGCMC	1 cut(s)	1360
BseXI	GCAGC	4 cut(s)	365, 696, 960, 2210
BseYI	CCCAGC	2 cut(s)	113, 944
BsgI	GTGCAG	3 cut(s)	127, 1365, 2425
BshFI	GGCC	5 cut(s)	589, 647, 908, 949, 2478
BshNI	GGYRCC	4 cut(s)	296, 662, 805, 999
BsiHKAI	GWGCWC	3 cut(s)	1340, 1360, 2514
BsiHKCI	CYCGRG	1 cut(s)	98
BslFI	GGGAC	7 cut(s)	164, 1135, 1280, 1339, 1747, 2182, 2448
BslI	CCNNNNNNNGG	8 cut(s)	120, 887, 945, 1322, 1340, 1822, 2392, 2474
BsmAI	GTCTC	7 cut(s)	1026, 1873, 2147, 2313, 2323, 2390, 2458
BsmFI	GGGAC	7 cut(s)	164, 1135, 1280, 1339, 1747, 2182, 2448
BsmI	GAATGC	1 cut(s)	519
BsnI	GGCC	5 cut(s)	589, 647, 908, 949, 2478
Bso31I	GGTCTC	3 cut(s)	2313, 2323, 2458
BsoBI	CYCGRG	1 cut(s)	98
Bsp119I	TTCGAA	1 cut(s)	384
Bsp1286I	GDGCHC	4 cut(s)	462, 1340, 1360, 2514
Bsp143I	GATC	7 cut(s)	430, 611, 735, 769, 955, 1635, 2632
Bsp1720I	GCTNAGC	3 cut(s)	202, 2026, 2031
BspANI	GGCC	5 cut(s)	589, 647, 908, 949, 2478
BspCNI	CTCAG	4 cut(s)	1009, 1087, 1237, 2044
BspLI	GGNNCC	9 cut(s)	6, 298, 664, 807, 873, 892, 1001, 1194, 2499
BspMI	ACCTGC	2 cut(s)	485, 1141
BspOI	GCTAGC	1 cut(s)	1209
BspPI	GGATC	4 cut(s)	619, 730, 950, 1630
BspT104I	TTCGAA	1 cut(s)	384
BspT107I	GGYRCC	4 cut(s)	296, 662, 805, 999
BspTNI	GGTCTC	3 cut(s)	2313, 2323, 2458
BsrDI	GCAATG	1 cut(s)	758
BsrFI	RCCGGY	3 cut(s)	395, 808, 1201
BsrI	ACTGG	7 cut(s)	466, 733, 802, 1305, 1539, 2209, 2519
BssAI	RCCGGY	3 cut(s)	395, 808, 1201
BssECI	CCNNGG	4 cut(s)	147, 373, 440, 894
BssMI	GATC	7 cut(s)	430, 611, 735, 769, 955, 1635, 2632
BssNI	GRCGYC	3 cut(s)	75, 156, 297
BssSI	CACGAG	1 cut(s)	2448
BssT1I	CCWWGG	1 cut(s)	894
Bst2BI	CACGAG	1 cut(s)	2448
Bst2UI	CCWGG	3 cut(s)	148, 479, 1365
Bst4CI	ACNGT	3 cut(s)	667, 1093, 2552
Bst6I	CTCTTC	3 cut(s)	35, 492, 1483
BstACI	GRCGYC	3 cut(s)	75, 156, 297
BstAPI	GCANNNNNTGC	1 cut(s)	1808
BstBI	TTCGAA	1 cut(s)	384
BstC8I	GCNNGC	7 cut(s)	401, 810, 1042, 1207, 1230, 2430, 2601
BstDEI	CTNAG	9 cut(s)	202, 1017, 1074, 1224, 1646, 1779, 1821, 2026, 2031
BstDSI	CCRYGG	1 cut(s)	440
BstEII	GGTNACC	1 cut(s)	1595
BstENI	CCTNNNNNAGG	1 cut(s)	1820
BstF5I	GGATG	9 cut(s)	134, 462, 807, 1761, 1999, 2233, 2355, 2628, 2661
BstH2I	RGCGCY	1 cut(s)	300
BstHHI	GCGC	1 cut(s)	299
BstKTI	GATC	7 cut(s)	433, 614, 738, 772, 958, 1638, 2635
BstMAI	GTCTC	7 cut(s)	1026, 1873, 2147, 2313, 2323, 2390, 2458
BstMBI	GATC	7 cut(s)	430, 611, 735, 769, 955, 1635, 2632
BstMWI	GCNNNNNNNGC	9 cut(s)	74, 162, 387, 396, 443, 1808, 2102, 2429, 2596
BstNI	CCWGG	3 cut(s)	148, 479, 1365
BstNSI	RCATGY	4 cut(s)	511, 1044, 1903, 2566
BstPI	GGTNACC	1 cut(s)	1595
BstSCI	CCNGG	9 cut(s)	146, 373, 477, 584, 738, 1002, 1363, 1384, 2678
BstSFI	CTRYAG	1 cut(s)	2641
BstSLI	GKGCMC	1 cut(s)	1360
BstV1I	GCAGC	4 cut(s)	365, 696, 960, 2210
BstV2I	GAAGAC	1 cut(s)	822
BstX2I	RGATCY	1 cut(s)	611
BstXI	CCANNNNNNTGG	1 cut(s)	1592
BstYI	RGATCY	1 cut(s)	611
BsuRI	GGCC	5 cut(s)	589, 647, 908, 949, 2478
BtgI	CCRYGG	1 cut(s)	440
BtrI	CACGTC	1 cut(s)	1534
BtsCI	GGATG	9 cut(s)	134, 462, 807, 1761, 1999, 2233, 2355, 2628, 2661
BtsI	GCAGTG	5 cut(s)	939, 1597, 1776, 2437, 2592
BveI	ACCTGC	2 cut(s)	485, 1141
Cac8I	GCNNGC	7 cut(s)	401, 810, 1042, 1207, 1230, 2430, 2601
CaiI	CAGNNNCTG	2 cut(s)	120, 2204
CfoI	GCGC	1 cut(s)	299
Cfr10I	RCCGGY	3 cut(s)	395, 808, 1201
CseI	GACGC	2 cut(s)	83, 145
Csp6I	GTAC	8 cut(s)	663, 732, 1000, 1555, 1776, 1891, 1897, 2613
CspCI	CAANNNNNGTGG	4 cut(s)	1989, 2024, 2205, 2240
CviQI	GTAC	8 cut(s)	663, 732, 1000, 1555, 1776, 1891, 1897, 2613
DdeI	CTNAG	9 cut(s)	202, 1017, 1074, 1224, 1646, 1779, 1821, 2026, 2031
DinI	GGCGCC	1 cut(s)	298
DpnI	GATC	7 cut(s)	432, 613, 737, 771, 957, 1637, 2634
DpnII	GATC	7 cut(s)	430, 611, 735, 769, 955, 1635, 2632
DrdI	GACNNNNNNGTC	2 cut(s)	80, 826
DseDI	GACNNNNNNGTC	2 cut(s)	80, 826
Eam1104I	CTCTTC	3 cut(s)	35, 492, 1483
EarI	CTCTTC	3 cut(s)	35, 492, 1483
Ecl136II	GAGCTC	1 cut(s)	1338
Eco130I	CCWWGG	1 cut(s)	894
Eco24I	GRGCYC	2 cut(s)	462, 1340
Eco31I	GGTCTC	3 cut(s)	2313, 2323, 2458
Eco47I	GGWCC	7 cut(s)	5, 123, 742, 872, 891, 1193, 2498
Eco53kI	GAGCTC	1 cut(s)	1338
Eco57I	CTGAAG	3 cut(s)	758, 851, 962
Eco88I	CYCGRG	1 cut(s)	98
Eco91I	GGTNACC	1 cut(s)	1595
EcoICRI	GAGCTC	1 cut(s)	1338
EcoNI	CCTNNNNNAGG	1 cut(s)	1820
EcoO109I	RGGNCCY	3 cut(s)	5, 872, 2498
EcoO65I	GGTNACC	1 cut(s)	1595
EcoRII	CCWGG	3 cut(s)	146, 477, 1363
EcoT14I	CCWWGG	1 cut(s)	894
EcoT22I	ATGCAT	2 cut(s)	1042, 2239
EcoT38I	GRGCYC	2 cut(s)	462, 1340
EgeI	GGCGCC	1 cut(s)	298
EheI	GGCGCC	1 cut(s)	298
ErhI	CCWWGG	1 cut(s)	894
FalI	AAGNNNNNCTT	2 cut(s)	2650, 2682
FaqI	GGGAC	7 cut(s)	164, 1135, 1280, 1339, 1747, 2182, 2448
FauI	CCCGC	1 cut(s)	2425
FblI	GTMKAC	2 cut(s)	339, 470
Fnu4HI	GCNGC	8 cut(s)	66, 78, 118, 379, 517, 710, 974, 2199
FokI	GGATG	9 cut(s)	121, 449, 814, 1768, 2006, 2240, 2342, 2635, 2648
FriOI	GRGCYC	2 cut(s)	462, 1340
Fsp4HI	GCNGC	8 cut(s)	66, 78, 118, 379, 517, 710, 974, 2199
FspBI	CTAG	2 cut(s)	1206, 2282
GlaI	GCGC	1 cut(s)	298
GluI	GCNGC	8 cut(s)	66, 78, 118, 379, 517, 710, 974, 2199
GsaI	CCCAGC	2 cut(s)	117, 948
GsuI	CTGGAG	2 cut(s)	193, 1362
HaeII	RGCGCY	1 cut(s)	300
HaeIII	GGCC	5 cut(s)	589, 647, 908, 949, 2478
HgaI	GACGC	2 cut(s)	83, 145
HhaI	GCGC	1 cut(s)	299
Hin1I	GRCGYC	3 cut(s)	75, 156, 297
Hin6I	GCGC	1 cut(s)	297
HinP1I	GCGC	1 cut(s)	297
HincII	GTYRAC	5 cut(s)	819, 1299, 1917, 2344, 2488
HindII	GTYRAC	5 cut(s)	819, 1299, 1917, 2344, 2488
HindIII	AAGCTT	1 cut(s)	863
Hpy188I	TCNGA	5 cut(s)	172, 1077, 1197, 1275, 2463
Hpy99I	CGWCG	5 cut(s)	74, 77, 817, 2138, 2375
HpyCH4III	ACNGT	3 cut(s)	667, 1093, 2552
HpyCH4IV	ACGT	3 cut(s)	815, 1533, 1913
HpyF10VI	GCNNNNNNNGC	9 cut(s)	74, 162, 387, 396, 443, 1808, 2102, 2429, 2596
HpyF3I	CTNAG	9 cut(s)	202, 1017, 1074, 1224, 1646, 1779, 1821, 2026, 2031
HpySE526I	ACGT	3 cut(s)	815, 1533, 1913
Hsp92I	GRCGYC	3 cut(s)	75, 156, 297
HspAI	GCGC	1 cut(s)	297
KasI	GGCGCC	1 cut(s)	296
KpnI	GGTACC	2 cut(s)	666, 1003
KroI	GCCGGC	1 cut(s)	808
KroNI	GCCGGC	1 cut(s)	810
Kzo9I	GATC	7 cut(s)	430, 611, 735, 769, 955, 1635, 2632
LmnI	GCTCC	3 cut(s)	99, 218, 1053
Lsp1109I	GCAGC	4 cut(s)	365, 696, 960, 2210
LweI	GCATC	5 cut(s)	143, 1060, 1120, 1231, 2670
MaeI	CTAG	2 cut(s)	1206, 2282
MaeII	ACGT	3 cut(s)	815, 1533, 1913
MalI	GATC	7 cut(s)	432, 613, 737, 771, 957, 1637, 2634
MboI	GATC	7 cut(s)	430, 611, 735, 769, 955, 1635, 2632
MflI	RGATCY	1 cut(s)	611
MhlI	GDGCHC	4 cut(s)	462, 1340, 1360, 2514
MluCI	AATT	9 cut(s)	1007, 1255, 1277, 1512, 1518, 1663, 1721, 1740, 1806
Mly113I	GGCGCC	1 cut(s)	297
MlyI	GAGTC	5 cut(s)	161, 195, 1028, 2343, 2684
MmeI	TCCRAC	2 cut(s)	348, 705
Mph1103I	ATGCAT	2 cut(s)	1042, 2239
MroNI	GCCGGC	1 cut(s)	808
MroXI	GAANNNNTTC	2 cut(s)	722, 2143
MseI	TTAA	6 cut(s)	636, 1086, 1749, 1866, 2121, 2559
MslI	CAYNNNNRTG	5 cut(s)	506, 1116, 1430, 2561, 2567
MspA1I	CMGCKG	2 cut(s)	117, 1228
MspR9I	CCNGG	9 cut(s)	148, 375, 479, 586, 740, 1004, 1365, 1386, 2680
Mva1269I	GAATGC	1 cut(s)	519
MvaI	CCWGG	3 cut(s)	148, 479, 1365
MwoI	GCNNNNNNNGC	9 cut(s)	74, 162, 387, 396, 443, 1808, 2102, 2429, 2596
NaeI	GCCGGC	1 cut(s)	810
NarI	GGCGCC	1 cut(s)	297
NciI	CCSGG	6 cut(s)	375, 586, 740, 1004, 1386, 2680
NdeII	GATC	7 cut(s)	430, 611, 735, 769, 955, 1635, 2632
NgoMIV	GCCGGC	1 cut(s)	808
NheI	GCTAGC	1 cut(s)	1205
NlaIV	GGNNCC	9 cut(s)	6, 298, 664, 807, 873, 892, 1001, 1194, 2499
NmeAIII	GCCGAG	2 cut(s)	1359, 2449
NsiI	ATGCAT	2 cut(s)	1042, 2239
NspI	RCATGY	4 cut(s)	511, 1044, 1903, 2566
NspV	TTCGAA	1 cut(s)	384
PaeI	GCATGC	1 cut(s)	1044
PaeR7I	CTCGAG	1 cut(s)	98
PaqCI	CACCTGC	1 cut(s)	1141
PciI	ACATGT	1 cut(s)	507
PcsI	WCGNNNNNNNCGW	2 cut(s)	78, 821
PctI	GAATGC	1 cut(s)	519
PdiI	GCCGGC	1 cut(s)	810
PdmI	GAANNNNTTC	2 cut(s)	722, 2143
PfeI	GAWTC	6 cut(s)	619, 697, 718, 1096, 1760, 2699
PflFI	GACNNNGTC	2 cut(s)	155, 788
PflMI	CCANNNNNTGG	2 cut(s)	120, 1322
PfoI	TCCNGGA	1 cut(s)	738
PkrI	GCNGC	8 cut(s)	67, 79, 119, 380, 518, 711, 975, 2200
PleI	GAGTC	5 cut(s)	161, 194, 1027, 2342, 2684
PluTI	GGCGCC	1 cut(s)	300
PpsI	GAGTC	5 cut(s)	161, 194, 1027, 2342, 2684
PpuMI	RGGWCCY	3 cut(s)	5, 872, 2498
PscI	ACATGT	1 cut(s)	507
PshBI	ATTAAT	1 cut(s)	1866
PsiI	TTATAA	1 cut(s)	1713
Psp124BI	GAGCTC	1 cut(s)	1340
Psp1406I	AACGTT	1 cut(s)	1913
Psp5II	RGGWCCY	3 cut(s)	5, 872, 2498
Psp6I	CCWGG	3 cut(s)	146, 477, 1363
PspEI	GGTNACC	1 cut(s)	1595
PspFI	CCCAGC	2 cut(s)	113, 944
PspGI	CCWGG	3 cut(s)	146, 477, 1363
PspN4I	GGNNCC	9 cut(s)	6, 298, 664, 807, 873, 892, 1001, 1194, 2499
PspPPI	RGGWCCY	3 cut(s)	5, 872, 2498
PstNI	CAGNNNCTG	2 cut(s)	120, 2204
PsuI	RGATCY	1 cut(s)	611
PsyI	GACNNNGTC	2 cut(s)	155, 788
PvuII	CAGCTG	1 cut(s)	1228
RsaI	GTAC	8 cut(s)	664, 733, 1001, 1556, 1777, 1892, 1898, 2614
RsaNI	GTAC	8 cut(s)	663, 732, 1000, 1555, 1776, 1891, 1897, 2613
RseI	CAYNNNNRTG	5 cut(s)	506, 1116, 1430, 2561, 2567
SacI	GAGCTC	1 cut(s)	1340
SaqAI	TTAA	6 cut(s)	636, 1086, 1749, 1866, 2121, 2559
SatI	GCNGC	8 cut(s)	66, 78, 118, 379, 517, 710, 974, 2199
Sau3AI	GATC	7 cut(s)	430, 611, 735, 769, 955, 1635, 2632
SchI	GAGTC	5 cut(s)	161, 195, 1028, 2343, 2684
ScrFI	CCNGG	9 cut(s)	148, 375, 479, 586, 740, 1004, 1365, 1386, 2680
SduI	GDGCHC	4 cut(s)	462, 1340, 1360, 2514
SfaNI	GCATC	5 cut(s)	143, 1060, 1120, 1231, 2670
SfcI	CTRYAG	1 cut(s)	2641
SfoI	GGCGCC	1 cut(s)	298
Sfr274I	CTCGAG	1 cut(s)	98
SfuI	TTCGAA	1 cut(s)	384
SinI	GGWCC	7 cut(s)	5, 123, 742, 872, 891, 1193, 2498
SlaI	CTCGAG	1 cut(s)	98
SmiMI	CAYNNNNRTG	5 cut(s)	506, 1116, 1430, 2561, 2567
SmlI	CTYRAG	2 cut(s)	98, 409
SmoI	CTYRAG	2 cut(s)	98, 409
SphI	GCATGC	1 cut(s)	1044
Sse9I	AATT	9 cut(s)	1007, 1255, 1277, 1512, 1518, 1663, 1721, 1740, 1806
SspDI	GGCGCC	1 cut(s)	296
SspMI	CTAG	2 cut(s)	1206, 2282
SstI	GAGCTC	1 cut(s)	1340
StyD4I	CCNGG	9 cut(s)	146, 373, 477, 584, 738, 1002, 1363, 1384, 2678
StyI	CCWWGG	1 cut(s)	894
TaaI	ACNGT	3 cut(s)	667, 1093, 2552
TaiI	ACGT	3 cut(s)	818, 1536, 1916
TaqI	TCGA	7 cut(s)	99, 345, 384, 429, 1634, 2272, 2370
TasI	AATT	9 cut(s)	1007, 1255, 1277, 1512, 1518, 1663, 1721, 1740, 1806
TatI	WGTACW	1 cut(s)	1896
TauI	GCSGC	4 cut(s)	68, 80, 120, 519
TfiI	GAWTC	6 cut(s)	619, 697, 718, 1096, 1760, 2699
Tru1I	TTAA	6 cut(s)	636, 1086, 1749, 1866, 2121, 2559
Tru9I	TTAA	6 cut(s)	636, 1086, 1749, 1866, 2121, 2559
TseI	GCWGC	4 cut(s)	378, 709, 973, 2198
TspDTI	ATGAA	9 cut(s)	1414, 1438, 1592, 2032, 2316, 2547, 2559, 2585, 2622
TspGWI	ACGGA	1 cut(s)	2151
Tth111I	GACNNNGTC	2 cut(s)	155, 788
Van91I	CCANNNNNTGG	2 cut(s)	120, 1322
VneI	GTGCAC	1 cut(s)	1356
VpaK11BI	GGWCC	7 cut(s)	5, 123, 742, 872, 891, 1193, 2498
VspI	ATTAAT	1 cut(s)	1866
XagI	CCTNNNNNAGG	1 cut(s)	1820
XapI	RAATTY	1 cut(s)	1277
XbaI	TCTAGA	1 cut(s)	2281
XceI	RCATGY	4 cut(s)	511, 1044, 1903, 2566
XhoI	CTCGAG	1 cut(s)	98
XmiI	GTMKAC	2 cut(s)	339, 470
XmnI	GAANNNNTTC	2 cut(s)	722, 2143
XspI	CTAG	2 cut(s)	1206, 2282
Zsp2I	ATGCAT	2 cut(s)	1042, 2239

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.