Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0006862

Physical Location & Seq

Genomic Coordinates Reverse (-)

45297647 .. 45300980

Gene Structure 3334 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG181600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2739 bp

ATGGGTCCTGTGAAAACCCTACAAGCCCTCTTCCTCTTTCTACCCCTCCTCCTCATCTTCACCGCCGCCGACGACGCCGCCGTCATGTCCAAGCTCCTCGAGAACCTCAAACCCAGCGGCTGGTCCTCCTCCGCATCCTACTGCACCTGGGACGGCGTCAAATGCGACTCCGACACTTCCAAACGAGTCACCTCCATCAGCTTAGCCTCCAACTCCCTCTCCGGCTCTCTCCCTTCAAATCTCAACGAACTCACCGAGCTCACCACTCTCTCTCTCCAAAGCAACACTCTCTCCGGCGCCTTACCTTCCCTCGCCAACCTCTCCAACCTCCAAGAAGTCTACCTCGACACCAATAACTTCACTTTCATTCCCCCCGGCTGCTTCGGAGGCTTGACCGGCTTGCAGACCTTGAGCATGAGCAACAATGTCGATCTTGCCCCGTGGGCGTTCCCATCTGAGCTCATCCAGTCTACCAGCCTGGTCACTCTTCAAGCAGGTAGCACCAACATGTATGGCAGCATTCCTGATATTTTCGGCTCTTTTGCAAACTTGCAAAATGTGAGATTGTCTTACAACAATCTTACTGGGCCTCTGCCCAAATCATTTTCTGGATCTGGGATTCAAAACCTCTGGATTAACAATCAGGCCGTTGGGTTATCTGGTACCGTTGAGGTTCTGTCCAACATGACTTCGTTGATTCAAGCGTGGCTGCATAAGAATCAGTTCACTGGTACGATCCCGGACCTTTCGCAATGTACTGCTCTCTCTGATCTTCTGCTTCATGACAATGTCTTTACTGGGATGGTGCCGGCGACGTTGACGGAGTTGTCTTCTTTGCAAAATGTTTCTTTGGACAACAATAAGCTTCAGGGTCCTATGCCGGAGTTTGGGTCCAAGGTGAAGTTCACTCTTGATGGTAATAGCTTTTGCAAAACCACTGCTGGGCCTTGTGATCCACAGGTCACTACGCTGCTTCAGGTTGCAGGGGCTTTTGGGTACCCGGAATTATTGGCTGAGTCTTGGACAGGAGACGATGCATGCGGAGGGTGGAGCTTCGTTATTTGTGATGCTCAGAAGGTAGTTACAGTGAATCTGGACAACAAGGATCTCAATGAGACTATTTCACCTGCCTTTGCCAACCTCACATCGTTGAAAACTTTGGTGCTGAAAAACAACAACTTGACGGGTCCGATACCGGCTACCCTGACAACATTACCTCAGCTGGCGGTTTTTGATGCTTCCAATAACAATTTATATGGGGACATTCCGAAATTTCCTTCTAGGGTGAAGTTGACTACTAGTGGTAATCCATTGATTGGGACTACGCCGAGCTCTGGAGGTGGAGGGAGTGCACCTCCTGGTAACAACTCAACTGCACCGGGTGGGAGTCCGTCTCCATCATCCAACGGTTCTTCAGTGTCGCCCGGTATGATTGCTGGTATAGTTATTGCTGTTGCTATTTTCATTGGAGTGTTGTTGTTTGTATTCATCAAATGTTATTTGAGTAAAAGGCATAGGAAGTTTGGAAGAGTGGATAATACGCTGAATGGAATTGAAATTGCTAAGGGCAACGTGACCAGTTGTGCAAATGGGTACAATGGAGTTGCAAATGAGTTGCATAGCCAGAGCAGGGGTGACCTTCATGTTTCTGTGGGTGGAAATGTCGCCATTTCAATCCTAGTTCTTAGACAAGTGACAAACAATTTTAGTGAGGATAATATATTGGGTAGAGGAGGATTTGGAGTTGTTTATAAAGGTGAGCTACATGATGGGACTAAAATTGCTGTGAAAAAGATGGAATCTGTGGCAGTGGGTACTAAGGGACTGATGAATGGGTTTCAAGCAGAAATTTCAGTCCTCACTAGGGTTAGGCATAGGCATTTGGTTGCTCTGTTAGGATATTGCATTAATGGTAATGAGAGACTTCTAGTGTACGAGTACATGGCACAAGGAACGTTGACACAACATTTGTTTGATTGGCGGGAGAATGGGGTAACTCCTCTTACTTGGAAGCAGAGAGTGACAATAGCTTTGGATGTGGCAAGAGGAGTGGAATATCTACACAGCTTAGCTCAACAAAGTTTCATTCACAGAGATTTGAAACCTTCAAATATACTTCTTGGGGATGCCATGAGGGCGAAGGTTGCGGACTTTGGTTTGGTTAAAAACGCCCCCGACGGAAAGTATTCGGTTGAGACAAGAGTGGCAGGGACATTCGGGTATATTGCACCAGAATATGCAGCTACCGGCAAAGTGACAACAAAGGTGGATGTTTATGCATTTGGAGTAGTGTTGATGGAGTTGATGAGTGGTCGAAAAGCTCTAGATGATACCATGCCAGATGAAAGGTCTCATTTGGTGTCATGGTTTCGCAGAGTCCTTGTCAACAAAGAAAACATTCGCAACTCCATCGACCAAACTCTTGACGCTAATGAGGAGACAATGGAGAGCATATACAAAGTTGCTGAGCTTGCAGAACACTGCACAGCTCCTGAGTCATATCAGAGACCAGACATGGGCCATGCAGTCAAGATCTTGGGTCCTCTTGTTGAGCACTGGAAACCTACAACCCACAAAGAAGAAGATGAAGGTAATTCAAGGATGTTTGATGATCTGTCCTATATGCACATGAACCTTTCTCAAGCAGCGGAAAGATGGGAAGCCGATGAAGGTACTTCAAGGATGTTTGATGATCTGTCCTCTAGCCATACTCAATCAAGCATCCCTTCAAAACCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

912

Amino Acids

98.27

Weight (kDa)

5.69

Isoelectric Point (pI)

37.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	86 - 142	5.4e-09	Leucine rich repeat
LRR_8	PF13855	361 - 418	4.6e-06	Leucine rich repeat
Pkinase	PF00069	570 - 843	1.6e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	572 - 842	3.1e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006862)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23750
fragaria_vesca	FvH4_4g13110 FvH4_4g13110
malus_domestica	MD04G1019100.v1.1
prunus_persica	Prupe.1G168400_v2.0.a1 Prupe.1G168500_v2.0.a1 Prupe.1G168500_v2.0.a1
pyrus_communis	pycom04g01540 pycom13g29180
rosa_chinensis	RchiOBHm_Chr4g0412891 RchiOBHm_Chr4g0413671
rosa_laevigata	RLG00000008202 RLG00000008250
rosa_multiflora	Rmu_sc0004133.1_g000014 Rmu_sc0005621.1_g000017 Rmu_sc0012279.1_g000002
rosa_roxburghii	Rroxscaffold_5G00357130
rosa_rugosa	Rorug04G0117300
rosa_samantha	Rh4AG176200 Rh4AG181600 Rh4BG176600 Rh4CG187200 Rh4DG173400 Rh4DG177100
rosa_wichuraiana	Rw4G014790 Rw4G015180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1752
AarI	CACCTGC	1 cut(s)	1135
AasI	GACNNNNNNGTC	2 cut(s)	80, 826
Acc36I	ACCTGC	2 cut(s)	485, 1135
Acc65I	GGTACC	2 cut(s)	662, 996
AccB1I	GGYRCC	4 cut(s)	296, 662, 805, 996
AccB7I	CCANNNNNTGG	2 cut(s)	120, 1316
AccI	GTMKAC	2 cut(s)	339, 470
AclI	AACGTT	1 cut(s)	1955
AclWI	GGATC	4 cut(s)	619, 730, 947, 1113
AcsI	RAATTY	2 cut(s)	1271, 1848
AcuI	CTGAAG	3 cut(s)	851, 959, 1398
AcyI	GRCGYC	3 cut(s)	75, 156, 297
AdeI	CACNNNGTG	1 cut(s)	1382
AfaI	GTAC	9 cut(s)	664, 733, 757, 998, 1595, 1816, 1934, 1940, 2674
AfiI	CCNNNNNNNGG	8 cut(s)	120, 887, 942, 1316, 1334, 1630, 1864, 2516
AflIII	ACRYGT	1 cut(s)	507
AhlI	ACTAGT	1 cut(s)	1298
AjnI	CCWGG	3 cut(s)	146, 477, 1357
AjuI	GAANNNNNNNTTGG	2 cut(s)	887, 919
Alw21I	GWGCWC	5 cut(s)	261, 462, 1334, 1354, 2556
Alw26I	GTCTC	8 cut(s)	1023, 1109, 1398, 1915, 2189, 2355, 2432, 2500
Alw44I	GTGCAC	1 cut(s)	1350
AlwI	GGATC	4 cut(s)	619, 730, 947, 1113
AlwNI	CAGNNNCTG	2 cut(s)	120, 2492
Ama87I	CYCGRG	1 cut(s)	98
AoxI	GGCC	4 cut(s)	587, 645, 944, 2518
ApaLI	GTGCAC	1 cut(s)	1350
ApeKI	GCWGC	6 cut(s)	378, 516, 709, 970, 2240, 2645
ApoI	RAATTY	2 cut(s)	1271, 1848
ArsI	GACNNNNNNTTYG	4 cut(s)	1951, 1983, 2014, 2046
AseI	ATTAAT	1 cut(s)	1908
Asp700I	GAANNNNTTC	3 cut(s)	722, 2185, 2397
Asp718I	GGTACC	2 cut(s)	662, 996
AspLEI	GCGC	1 cut(s)	299
AsuC2I	CCSGG	5 cut(s)	375, 740, 1001, 1380, 1425
AsuHPI	GGTGA	9 cut(s)	52, 181, 244, 253, 910, 1116, 1297, 1646, 1769
AvaI	CYCGRG	1 cut(s)	98
AvaII	GGWCC	7 cut(s)	5, 123, 742, 872, 891, 1187, 2540
BaeGI	GKGCMC	1 cut(s)	1354
BanI	GGYRCC	4 cut(s)	296, 662, 805, 996
BanII	GRGCYC	3 cut(s)	261, 462, 1334
BbsI	GAAGAC	1 cut(s)	822
Bbv12I	GWGCWC	5 cut(s)	261, 462, 1334, 1354, 2556
BbvCI	CCTCAGC	1 cut(s)	1218
BbvI	GCAGC	6 cut(s)	365, 528, 696, 957, 2252, 2657
BceAI	ACGGC	3 cut(s)	65, 169, 632
BcgI	CGANNNNNNTGC	4 cut(s)	409, 443, 2392, 2426
BciT130I	CCWGG	3 cut(s)	148, 479, 1359
BcnI	CCSGG	5 cut(s)	375, 740, 1001, 1380, 1425
BcoDI	GTCTC	8 cut(s)	1023, 1109, 1398, 1915, 2189, 2355, 2432, 2500
BcuI	ACTAGT	1 cut(s)	1298
BfaI	CTAG	7 cut(s)	1281, 1299, 1679, 1863, 1928, 2324, 2703
BfoI	RGCGCY	1 cut(s)	300
BfuAI	ACCTGC	2 cut(s)	485, 1135
BglI	GCCNNNNNGGC	2 cut(s)	443, 2135
BglII	AGATCT	1 cut(s)	2532
BisI	GCNGC	9 cut(s)	66, 78, 118, 379, 517, 710, 971, 2241, 2646
BlpI	GCTNAGC	3 cut(s)	202, 2068, 2466
BlsI	GCNGC	9 cut(s)	67, 79, 119, 380, 518, 711, 972, 2242, 2647
Bme1390I	CCNGG	8 cut(s)	148, 375, 479, 740, 1001, 1359, 1380, 1425
Bme18I	GGWCC	7 cut(s)	5, 123, 742, 872, 891, 1187, 2540
BmeT110I	CYCGRG	1 cut(s)	98
BmiI	GGNNCC	9 cut(s)	6, 298, 664, 807, 873, 892, 998, 1188, 2541
BmrFI	CCNGG	8 cut(s)	148, 375, 479, 740, 1001, 1359, 1380, 1425
BmrI	ACTGGG	2 cut(s)	594, 807
BmsI	GCATC	6 cut(s)	143, 1024, 1057, 1225, 2116, 2730
BmuI	ACTGGG	2 cut(s)	594, 807
BpiI	GAAGAC	1 cut(s)	822
BplI	GAGNNNNNCTC	4 cut(s)	1339, 1371, 1378, 1410
BpmI	CTGGAG	1 cut(s)	1356
Bpu10I	CCTNAGC	2 cut(s)	1218, 1563
Bpu1102I	GCTNAGC	3 cut(s)	202, 2068, 2466
BpuEI	CTTGAG	2 cut(s)	430, 2625
BpuMI	CCSGG	5 cut(s)	375, 740, 1001, 1380, 1425
BsaHI	GRCGYC	3 cut(s)	75, 156, 297
BsaI	GGTCTC	2 cut(s)	2355, 2500
BsaJI	CCNNGG	4 cut(s)	147, 373, 440, 894
BsaXI	ACNNNNNCTCC	8 cut(s)	33, 63, 203, 233, 275, 305, 875, 905
Bsc4I	CCNNNNNNNGG	8 cut(s)	120, 887, 942, 1316, 1334, 1630, 1864, 2516
Bse118I	RCCGGY	4 cut(s)	395, 808, 1195, 2246
Bse1I	ACTGG	6 cut(s)	466, 589, 733, 802, 1578, 2561
Bse3DI	GCAATG	1 cut(s)	758
BseBI	CCWGG	3 cut(s)	148, 479, 1359
BseDI	CCNNGG	4 cut(s)	147, 373, 440, 894
BseLI	CCNNNNNNNGG	8 cut(s)	120, 887, 942, 1316, 1334, 1630, 1864, 2516
BseMI	GCAATG	1 cut(s)	758
BseMII	CTCAG	6 cut(s)	447, 1005, 1085, 1232, 2457, 2484
BseNI	ACTGG	6 cut(s)	466, 589, 733, 802, 1578, 2561
BseRI	GAGGAG	8 cut(s)	38, 41, 86, 118, 1746, 1989, 2061, 2450
BseSI	GKGCMC	1 cut(s)	1354
BseXI	GCAGC	6 cut(s)	365, 528, 696, 957, 2252, 2657
BseYI	CCCAGC	2 cut(s)	113, 941
BsgI	GTGCAG	3 cut(s)	127, 1359, 2467
BshFI	GGCC	4 cut(s)	589, 647, 946, 2520
BshNI	GGYRCC	4 cut(s)	296, 662, 805, 996
BsiHKAI	GWGCWC	5 cut(s)	261, 462, 1334, 1354, 2556
BsiHKCI	CYCGRG	1 cut(s)	98
BslFI	GGGAC	6 cut(s)	164, 1274, 1333, 1786, 1836, 2224
BslI	CCNNNNNNNGG	8 cut(s)	120, 887, 942, 1316, 1334, 1630, 1864, 2516
BsmAI	GTCTC	8 cut(s)	1023, 1109, 1398, 1915, 2189, 2355, 2432, 2500
BsmBI	CGTCTC	2 cut(s)	1023, 1398
BsmFI	GGGAC	6 cut(s)	164, 1274, 1333, 1786, 1836, 2224
BsmI	GAATGC	1 cut(s)	519
BsnI	GGCC	4 cut(s)	589, 647, 946, 2520
Bso31I	GGTCTC	2 cut(s)	2355, 2500
BsoBI	CYCGRG	1 cut(s)	98
Bsp1286I	GDGCHC	5 cut(s)	261, 462, 1334, 1354, 2556
Bsp143I	GATC	9 cut(s)	430, 611, 735, 769, 952, 1105, 2532, 2611, 2692
Bsp1720I	GCTNAGC	3 cut(s)	202, 2068, 2466
BspANI	GGCC	4 cut(s)	589, 647, 946, 2520
BspCNI	CTCAG	6 cut(s)	448, 1006, 1084, 1231, 2458, 2485
BspHI	TCATGA	1 cut(s)	781
BspLI	GGNNCC	9 cut(s)	6, 298, 664, 807, 873, 892, 998, 1188, 2541
BspMI	ACCTGC	2 cut(s)	485, 1135
BspPI	GGATC	4 cut(s)	619, 730, 947, 1113
BspT107I	GGYRCC	4 cut(s)	296, 662, 805, 996
BspTNI	GGTCTC	2 cut(s)	2355, 2500
BsrDI	GCAATG	1 cut(s)	758
BsrFI	RCCGGY	4 cut(s)	395, 808, 1195, 2246
BsrI	ACTGG	6 cut(s)	466, 589, 733, 802, 1578, 2561
BssAI	RCCGGY	4 cut(s)	395, 808, 1195, 2246
BssECI	CCNNGG	4 cut(s)	147, 373, 440, 894
BssMI	GATC	9 cut(s)	430, 611, 735, 769, 952, 1105, 2532, 2611, 2692
BssNI	GRCGYC	3 cut(s)	75, 156, 297
BssT1I	CCWWGG	1 cut(s)	894
Bst2UI	CCWGG	3 cut(s)	148, 479, 1359
Bst4CI	ACNGT	3 cut(s)	667, 1087, 1409
Bst6I	CTCTTC	3 cut(s)	35, 492, 1522
BstACI	GRCGYC	3 cut(s)	75, 156, 297
BstC8I	GCNNGC	5 cut(s)	401, 810, 1039, 1224, 2472
BstDSI	CCRYGG	1 cut(s)	440
BstEII	GGTNACC	1 cut(s)	1634
BstH2I	RGCGCY	1 cut(s)	300
BstHHI	GCGC	1 cut(s)	299
BstKTI	GATC	9 cut(s)	433, 614, 738, 772, 955, 1108, 2535, 2614, 2695
BstMAI	GTCTC	8 cut(s)	1023, 1109, 1398, 1915, 2189, 2355, 2432, 2500
BstMBI	GATC	9 cut(s)	430, 611, 735, 769, 952, 1105, 2532, 2611, 2692
BstMWI	GCNNNNNNNGC	8 cut(s)	74, 162, 387, 396, 443, 2135, 2144, 2471
BstNI	CCWGG	3 cut(s)	148, 479, 1359
BstNSI	RCATGY	2 cut(s)	511, 1041
BstPI	GGTNACC	1 cut(s)	1634
BstSCI	CCNGG	8 cut(s)	146, 373, 477, 738, 999, 1357, 1378, 1423
BstSLI	GKGCMC	1 cut(s)	1354
BstV1I	GCAGC	6 cut(s)	365, 528, 696, 957, 2252, 2657
BstV2I	GAAGAC	1 cut(s)	822
BstX2I	RGATCY	3 cut(s)	611, 1105, 2532
BstYI	RGATCY	3 cut(s)	611, 1105, 2532
BsuRI	GGCC	4 cut(s)	589, 647, 946, 2520
BtgI	CCRYGG	1 cut(s)	440
BtsI	GCAGTG	3 cut(s)	936, 1815, 2479
BtsIMutI	CAGTG	7 cut(s)	726, 936, 1092, 1422, 1815, 2479, 2554
BveI	ACCTGC	2 cut(s)	485, 1135
Cac8I	GCNNGC	5 cut(s)	401, 810, 1039, 1224, 2472
CaiI	CAGNNNCTG	2 cut(s)	120, 2492
CciI	TCATGA	1 cut(s)	781
CfoI	GCGC	1 cut(s)	299
Cfr10I	RCCGGY	4 cut(s)	395, 808, 1195, 2246
CseI	GACGC	3 cut(s)	83, 145, 2435
Csp6I	GTAC	9 cut(s)	663, 732, 756, 997, 1594, 1815, 1933, 1939, 2673
CspCI	CAANNNNNGTGG	4 cut(s)	2031, 2066, 2247, 2282
CviQI	GTAC	9 cut(s)	663, 732, 756, 997, 1594, 1815, 1933, 1939, 2673
DinI	GGCGCC	1 cut(s)	298
DpnI	GATC	9 cut(s)	432, 613, 737, 771, 954, 1107, 2534, 2613, 2694
DpnII	GATC	9 cut(s)	430, 611, 735, 769, 952, 1105, 2532, 2611, 2692
DraIII	CACNNNGTG	1 cut(s)	1382
DrdI	GACNNNNNNGTC	2 cut(s)	80, 826
DseDI	GACNNNNNNGTC	2 cut(s)	80, 826
Eam1104I	CTCTTC	3 cut(s)	35, 492, 1522
EarI	CTCTTC	3 cut(s)	35, 492, 1522
Ecl136II	GAGCTC	3 cut(s)	259, 460, 1332
Eco130I	CCWWGG	1 cut(s)	894
Eco24I	GRGCYC	3 cut(s)	261, 462, 1334
Eco31I	GGTCTC	2 cut(s)	2355, 2500
Eco47I	GGWCC	7 cut(s)	5, 123, 742, 872, 891, 1187, 2540
Eco53kI	GAGCTC	3 cut(s)	259, 460, 1332
Eco57I	CTGAAG	3 cut(s)	851, 959, 1398
Eco88I	CYCGRG	1 cut(s)	98
Eco91I	GGTNACC	1 cut(s)	1634
EcoICRI	GAGCTC	3 cut(s)	259, 460, 1332
EcoO109I	RGGNCCY	3 cut(s)	5, 872, 2540
EcoO65I	GGTNACC	1 cut(s)	1634
EcoRII	CCWGG	3 cut(s)	146, 477, 1357
EcoT14I	CCWWGG	1 cut(s)	894
EcoT22I	ATGCAT	2 cut(s)	1039, 2281
EcoT38I	GRGCYC	3 cut(s)	261, 462, 1334
EgeI	GGCGCC	1 cut(s)	298
EheI	GGCGCC	1 cut(s)	298
ErhI	CCWWGG	1 cut(s)	894
Esp3I	CGTCTC	2 cut(s)	1023, 1398
FalI	AAGNNNNNCTT	1 cut(s)	2710
FaqI	GGGAC	6 cut(s)	164, 1274, 1333, 1786, 1836, 2224
FauI	CCCGC	1 cut(s)	1974
FblI	GTMKAC	2 cut(s)	339, 470
Fnu4HI	GCNGC	9 cut(s)	66, 78, 118, 379, 517, 710, 971, 2241, 2646
FriOI	GRGCYC	3 cut(s)	261, 462, 1334
Fsp4HI	GCNGC	9 cut(s)	66, 78, 118, 379, 517, 710, 971, 2241, 2646
FspBI	CTAG	7 cut(s)	1281, 1299, 1679, 1863, 1928, 2324, 2703
GlaI	GCGC	1 cut(s)	298
GluI	GCNGC	9 cut(s)	66, 78, 118, 379, 517, 710, 971, 2241, 2646
GsaI	CCCAGC	2 cut(s)	117, 945
GsuI	CTGGAG	1 cut(s)	1356
HaeII	RGCGCY	1 cut(s)	300
HaeIII	GGCC	4 cut(s)	589, 647, 946, 2520
HgaI	GACGC	3 cut(s)	83, 145, 2435
HhaI	GCGC	1 cut(s)	299
Hin1I	GRCGYC	3 cut(s)	75, 156, 297
Hin6I	GCGC	1 cut(s)	297
HinP1I	GCGC	1 cut(s)	297
HincII	GTYRAC	4 cut(s)	819, 1293, 1959, 2386
HindII	GTYRAC	4 cut(s)	819, 1293, 1959, 2386
HindIII	AAGCTT	1 cut(s)	863
HphI	GGTGA	9 cut(s)	52, 181, 244, 253, 910, 1116, 1297, 1646, 1769
Hpy188I	TCNGA	8 cut(s)	172, 386, 457, 769, 1074, 1191, 1269, 2505
Hpy99I	CGWCG	4 cut(s)	74, 77, 817, 2180
HpyCH4III	ACNGT	3 cut(s)	667, 1087, 1409
HpyCH4IV	ACGT	3 cut(s)	815, 1572, 1955
HpyF10VI	GCNNNNNNNGC	8 cut(s)	74, 162, 387, 396, 443, 2135, 2144, 2471
HpySE526I	ACGT	3 cut(s)	815, 1572, 1955
Hsp92I	GRCGYC	3 cut(s)	75, 156, 297
HspAI	GCGC	1 cut(s)	297
KasI	GGCGCC	1 cut(s)	296
KpnI	GGTACC	2 cut(s)	666, 1000
KroI	GCCGGC	1 cut(s)	808
KroNI	GCCGGC	1 cut(s)	810
Kzo9I	GATC	9 cut(s)	430, 611, 735, 769, 952, 1105, 2532, 2611, 2692
LmnI	GCTCC	3 cut(s)	99, 1050, 2494
Lsp1109I	GCAGC	6 cut(s)	365, 528, 696, 957, 2252, 2657
LweI	GCATC	6 cut(s)	143, 1024, 1057, 1225, 2116, 2730
MaeI	CTAG	7 cut(s)	1281, 1299, 1679, 1863, 1928, 2324, 2703
MaeII	ACGT	3 cut(s)	815, 1572, 1955
MalI	GATC	9 cut(s)	432, 613, 737, 771, 954, 1107, 2534, 2613, 2694
MboI	GATC	9 cut(s)	430, 611, 735, 769, 952, 1105, 2532, 2611, 2692
MboII	GAAGA	9 cut(s)	22, 49, 479, 764, 822, 1404, 1539, 2591, 2594
MflI	RGATCY	3 cut(s)	611, 1105, 2532
MhlI	GDGCHC	5 cut(s)	261, 462, 1334, 1354, 2556
MluCI	AATT	9 cut(s)	1004, 1249, 1271, 1551, 1557, 1702, 1779, 1848, 2593
Mly113I	GGCGCC	1 cut(s)	297
MlyI	GAGTC	6 cut(s)	161, 195, 1025, 1396, 2385, 2504
MmeI	TCCRAC	5 cut(s)	195, 234, 348, 705, 1428
Mph1103I	ATGCAT	2 cut(s)	1039, 2281
MroNI	GCCGGC	1 cut(s)	808
MroXI	GAANNNNTTC	3 cut(s)	722, 2185, 2397
MseI	TTAA	3 cut(s)	636, 1908, 2163
MslI	CAYNNNNRTG	3 cut(s)	506, 786, 1469
MspA1I	CMGCKG	3 cut(s)	117, 1222, 2648
MspR9I	CCNGG	8 cut(s)	148, 375, 479, 740, 1001, 1359, 1380, 1425
Mva1269I	GAATGC	1 cut(s)	519
MvaI	CCWGG	3 cut(s)	148, 479, 1359
MwoI	GCNNNNNNNGC	8 cut(s)	74, 162, 387, 396, 443, 2135, 2144, 2471
NaeI	GCCGGC	1 cut(s)	810
NarI	GGCGCC	1 cut(s)	297
NciI	CCSGG	5 cut(s)	375, 740, 1001, 1380, 1425
NdeII	GATC	9 cut(s)	430, 611, 735, 769, 952, 1105, 2532, 2611, 2692
NgoMIV	GCCGGC	1 cut(s)	808
NlaIV	GGNNCC	9 cut(s)	6, 298, 664, 807, 873, 892, 998, 1188, 2541
NmeAIII	GCCGAG	1 cut(s)	1353
NmuCI	GTSAC	8 cut(s)	187, 481, 961, 1573, 1634, 1693, 2020, 2254
NsiI	ATGCAT	2 cut(s)	1039, 2281
NspI	RCATGY	2 cut(s)	511, 1041
PaeI	GCATGC	1 cut(s)	1041
PaeR7I	CTCGAG	1 cut(s)	98
PagI	TCATGA	1 cut(s)	781
PaqCI	CACCTGC	1 cut(s)	1135
PciI	ACATGT	1 cut(s)	507
PcsI	WCGNNNNNNNCGW	2 cut(s)	78, 252
PctI	GAATGC	1 cut(s)	519
PdiI	GCCGGC	1 cut(s)	810
PdmI	GAANNNNTTC	3 cut(s)	722, 2185, 2397
PfeI	GAWTC	5 cut(s)	619, 697, 718, 1090, 1799
PflFI	GACNNNGTC	2 cut(s)	155, 788
PflMI	CCANNNNNTGG	2 cut(s)	120, 1316
PfoI	TCCNGGA	1 cut(s)	738
PkrI	GCNGC	9 cut(s)	67, 79, 119, 380, 518, 711, 972, 2242, 2647
PleI	GAGTC	6 cut(s)	161, 194, 1024, 1395, 2384, 2503
PluTI	GGCGCC	1 cut(s)	300
PpsI	GAGTC	6 cut(s)	161, 194, 1024, 1395, 2384, 2503
PpuMI	RGGWCCY	3 cut(s)	5, 872, 2540
PscI	ACATGT	1 cut(s)	507
PshBI	ATTAAT	1 cut(s)	1908
PsiI	TTATAA	1 cut(s)	1752
Psp124BI	GAGCTC	3 cut(s)	261, 462, 1334
Psp1406I	AACGTT	1 cut(s)	1955
Psp5II	RGGWCCY	3 cut(s)	5, 872, 2540
Psp6I	CCWGG	3 cut(s)	146, 477, 1357
PspEI	GGTNACC	1 cut(s)	1634
PspFI	CCCAGC	2 cut(s)	113, 941
PspGI	CCWGG	3 cut(s)	146, 477, 1357
PspN4I	GGNNCC	9 cut(s)	6, 298, 664, 807, 873, 892, 998, 1188, 2541
PspPPI	RGGWCCY	3 cut(s)	5, 872, 2540
PstNI	CAGNNNCTG	2 cut(s)	120, 2492
PsuI	RGATCY	3 cut(s)	611, 1105, 2532
PsyI	GACNNNGTC	2 cut(s)	155, 788
PvuII	CAGCTG	1 cut(s)	1222
RsaI	GTAC	9 cut(s)	664, 733, 757, 998, 1595, 1816, 1934, 1940, 2674
RsaNI	GTAC	9 cut(s)	663, 732, 756, 997, 1594, 1815, 1933, 1939, 2673
RseI	CAYNNNNRTG	3 cut(s)	506, 786, 1469
SacI	GAGCTC	3 cut(s)	261, 462, 1334
SaqAI	TTAA	3 cut(s)	636, 1908, 2163
SatI	GCNGC	9 cut(s)	66, 78, 118, 379, 517, 710, 971, 2241, 2646
Sau3AI	GATC	9 cut(s)	430, 611, 735, 769, 952, 1105, 2532, 2611, 2692
SchI	GAGTC	6 cut(s)	161, 195, 1025, 1396, 2385, 2504
ScrFI	CCNGG	8 cut(s)	148, 375, 479, 740, 1001, 1359, 1380, 1425
SduI	GDGCHC	5 cut(s)	261, 462, 1334, 1354, 2556
SfaNI	GCATC	6 cut(s)	143, 1024, 1057, 1225, 2116, 2730
SfoI	GGCGCC	1 cut(s)	298
Sfr274I	CTCGAG	1 cut(s)	98
SinI	GGWCC	7 cut(s)	5, 123, 742, 872, 891, 1187, 2540
SlaI	CTCGAG	1 cut(s)	98
SmiMI	CAYNNNNRTG	3 cut(s)	506, 786, 1469
SmlI	CTYRAG	3 cut(s)	98, 409, 2640
SmoI	CTYRAG	3 cut(s)	98, 409, 2640
SpeI	ACTAGT	1 cut(s)	1298
SphI	GCATGC	1 cut(s)	1041
Sse9I	AATT	9 cut(s)	1004, 1249, 1271, 1551, 1557, 1702, 1779, 1848, 2593
SspDI	GGCGCC	1 cut(s)	296
SspMI	CTAG	7 cut(s)	1281, 1299, 1679, 1863, 1928, 2324, 2703
SstI	GAGCTC	3 cut(s)	261, 462, 1334
StyD4I	CCNGG	8 cut(s)	146, 373, 477, 738, 999, 1357, 1378, 1423
StyI	CCWWGG	1 cut(s)	894
TaaI	ACNGT	3 cut(s)	667, 1087, 1409
TaiI	ACGT	3 cut(s)	818, 1575, 1958
TaqI	TCGA	5 cut(s)	99, 345, 429, 2314, 2412
TasI	AATT	9 cut(s)	1004, 1249, 1271, 1551, 1557, 1702, 1779, 1848, 2593
TatI	WGTACW	2 cut(s)	755, 1938
TauI	GCSGC	3 cut(s)	68, 80, 120
TfiI	GAWTC	5 cut(s)	619, 697, 718, 1090, 1799
Tru1I	TTAA	3 cut(s)	636, 1908, 2163
Tru9I	TTAA	3 cut(s)	636, 1908, 2163
TscAI	CASTG	7 cut(s)	733, 943, 1092, 1422, 1815, 2486, 2561
TseFI	GTSAC	8 cut(s)	187, 481, 961, 1573, 1634, 1693, 2020, 2254
TseI	GCWGC	6 cut(s)	378, 516, 709, 970, 2240, 2645
Tsp45I	GTSAC	8 cut(s)	187, 481, 961, 1573, 1634, 1693, 2020, 2254
TspGWI	ACGGA	3 cut(s)	836, 1380, 2193
TspRI	CASTG	7 cut(s)	733, 943, 1092, 1422, 1815, 2486, 2561
Tth111I	GACNNNGTC	2 cut(s)	155, 788
Van91I	CCANNNNNTGG	2 cut(s)	120, 1316
VneI	GTGCAC	1 cut(s)	1350
VpaK11BI	GGWCC	7 cut(s)	5, 123, 742, 872, 891, 1187, 2540
VspI	ATTAAT	1 cut(s)	1908
XapI	RAATTY	2 cut(s)	1271, 1848
XbaI	TCTAGA	1 cut(s)	2323
XceI	RCATGY	2 cut(s)	511, 1041
XhoI	CTCGAG	1 cut(s)	98
XmiI	GTMKAC	2 cut(s)	339, 470
XmnI	GAANNNNTTC	3 cut(s)	722, 2185, 2397
XspI	CTAG	7 cut(s)	1281, 1299, 1679, 1863, 1928, 2324, 2703
Zsp2I	ATGCAT	2 cut(s)	1039, 2281

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.