Prupe.1G177400_v2.0.a1

phosphatase 2c

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
15141339 .. 15146940
5602 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G177400.1

Sequence Viewer

Length: 1230 bp
ATGGTGGGGTTGGAGTGCTTTCTGGACTTGGTCAGGGCACTCGGCATGGGCTCCTGCCTCTCCCTGGAAGGCGGGTCAGCCTACGGCCCAGTCCCTTCCTCCCCGGGGGCGGGCAACAAGAGGAGGAAGAGGAGGGTGACTGGGAACTCCTCTGCCACGGTGGTGGCGCCGCCTTCCAATAATCTGGAGATGTGGCTGCACAGAGTCCCTGGCAGGCAGTTCCAGAATGGTTCCTCTGATTTTGCTTCCTTGTTCTGCAAGCAAGGCAAGAAAGGGGTCAATCAGGACGCCATGATTGCTTGGGAGAATTTTGGTTCCCCGGATACTATATTTTGTGGTGTTTTTGATGGGCATGGCCCTTTTGGCCATGTGGTTGCAAAGAAGGTGAGGGATGCTCTACCTTTGAAGTTGACTTCACAATGGGTATTGACTAATAACGCCAAGAAAGGGGCTGCTGATGATACCAACGAGGCTGCTTCATATCAAGACCACAAGGATAACGAGCACTGTGAGCTTTTTGTGACATTGAAAGATTCTTTTCTGAAGGCTTTTAAGGTCATGGACAAGGAGCTCAAATTGCATCCTCGTATTGATTGCTATTGCAGTGGGACAACTGCTGTTACCTTGGTCAAGCAGGGTCAGGATCTTGTTATTGCAAATGTTGGGGACTCTAGAGCTCTACTAGGCACCAGAGATGAAGATGGCTCCCTCGTTGCTGTTCAGTTGACTGTAGACCTCAAACCAAATCTTCCAAGGGAAGCAGAGAGGATTATGCGATGTAAAGGACGAGTATTTGCTCTCCAAAACGAGCCTGAGGTCGCTCGAGTTTGGTTGCCCAACAGTAATTCACCTGGCCTAGCCATGGCACGGGCTTTTGGAGATTTCTGCCTAAAGGACTTTGGTTTAATCTCTGTCCCTGATATTTCTTATCGTCGCCTCACTGAGAATGATGAATTTGTAGTATTGGCTACTGATGGGATATGGGATGTCCTCTCAAATGAAGAAGTGGTAAAAATAGTAGCATTAGCTCCACGAGCCTCTGCTGCTCGAGCCCTGGTAGAGTCAGCAACTCGAGCTTGGAGATCAAAATACCCGTATGTTAAGGTTGATGATTGTGCTGTAGTTTGCCTCTTCCTCACCTCCAGTACATCTGACATTAGTTCCGATTTCTCACCAACCGGAGAGGAAATGAGCTCTGGAAATTCTTCCCAATATCAGGATGGGAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

410

Amino Acids

44.47

Weight (kDa)

6.13

Isoelectric Point (pI)

33.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 166, 686
AccI GTMKAC 1 cut(s) 732
AciI CCGC 3 cut(s) 72, 110, 170
AclWI GGATC 1 cut(s) 651
AcoI YGGCCR 1 cut(s) 364
AcsI RAATTY 3 cut(s) 307, 953, 1201
AcuI CTGAAG 1 cut(s) 563
AcyI GRCGYC 2 cut(s) 167, 288
AfaI GTAC 1 cut(s) 1147
AfiI CCNNNNNNNGG 8 cut(s) 64, 105, 109, 110, 447, 862, 867, 1216
AgsI TTSAA 2 cut(s) 406, 529
AjnI CCWGG 4 cut(s) 63, 208, 850, 1053
AleI CACNNNNGTG 1 cut(s) 161
AluBI AGCT 6 cut(s) 514, 571, 677, 1028, 1076, 1194
AluI AGCT 6 cut(s) 514, 571, 677, 1028, 1076, 1194
Alw21I GWGCWC 4 cut(s) 507, 573, 679, 1196
AlwI GGATC 1 cut(s) 651
Ama87I CYCGRG 4 cut(s) 103, 822, 1047, 1071
AoxI GGCC 4 cut(s) 85, 355, 364, 853
ApeKI GCWGC 4 cut(s) 196, 452, 473, 1043
ApoI RAATTY 3 cut(s) 307, 953, 1201
Asp700I GAANNNNTTC 1 cut(s) 1204
AspLEI GCGC 1 cut(s) 169
AspS9I GGNCC 2 cut(s) 86, 356
AsuC2I CCSGG 3 cut(s) 104, 105, 320
AsuHPI GGTGA 5 cut(s) 148, 397, 840, 1129, 1164
AvaI CYCGRG 4 cut(s) 103, 822, 1047, 1071
AxyI CCTNAGG 1 cut(s) 813
BaeGI GKGCMC 1 cut(s) 40
BalI TGGCCA 1 cut(s) 366
BanI GGYRCC 2 cut(s) 166, 686
BanII GRGCYC 5 cut(s) 53, 573, 679, 1054, 1196
BauI CACGAG 1 cut(s) 1032
Bbv12I GWGCWC 4 cut(s) 507, 573, 679, 1196
BbvI GCAGC 4 cut(s) 183, 439, 460, 1030
BccI CCATC 4 cut(s) 341, 695, 968, 1214
BceAI ACGGC 1 cut(s) 100
BciT130I CCWGG 4 cut(s) 65, 210, 852, 1055
BciVI GTATCC 1 cut(s) 316
BcnI CCSGG 3 cut(s) 104, 105, 320
BfaI CTAG 3 cut(s) 672, 683, 857
BfmI CTRYAG 2 cut(s) 729, 1119
BfoI RGCGCY 1 cut(s) 170
BfuI GTATCC 1 cut(s) 316
BglI GCCNNNNNGGC 1 cut(s) 363
BisI GCNGC 5 cut(s) 170, 197, 453, 474, 1044
BlsI GCNGC 5 cut(s) 171, 198, 454, 475, 1045
Bme1390I CCNGG 7 cut(s) 65, 104, 105, 210, 320, 852, 1055
BmeT110I CYCGRG 4 cut(s) 103, 822, 1047, 1071
BmgT120I GGNCC 2 cut(s) 86, 356
BmiI GGNNCC 6 cut(s) 52, 168, 232, 316, 688, 706
BmrFI CCNGG 7 cut(s) 65, 104, 105, 210, 320, 852, 1055
BmrI ACTGGG 2 cut(s) 83, 150
BmsI GCATC 2 cut(s) 382, 589
BmuI ACTGGG 2 cut(s) 83, 150
BplI GAGNNNNNCTC 2 cut(s) 379, 411
BpmI CTGGAG 2 cut(s) 206, 1126
BpuMI CCSGG 3 cut(s) 104, 105, 320
BsaHI GRCGYC 2 cut(s) 167, 288
BsaWI WCCGGW 1 cut(s) 1178
Bsc4I CCNNNNNNNGG 8 cut(s) 64, 105, 109, 110, 447, 862, 867, 1216
Bse1I ACTGG 3 cut(s) 89, 145, 1143
Bse21I CCTNAGG 1 cut(s) 813
BseBI CCWGG 4 cut(s) 65, 210, 852, 1055
BseGI GGATG 4 cut(s) 397, 580, 991, 1225
BseLI CCNNNNNNNGG 8 cut(s) 64, 105, 109, 110, 447, 862, 867, 1216
BseMII CTCAG 2 cut(s) 804, 933
BseNI ACTGG 3 cut(s) 89, 145, 1143
BseRI GAGGAG 3 cut(s) 136, 139, 145
BseSI GKGCMC 1 cut(s) 40
BseXI GCAGC 4 cut(s) 183, 439, 460, 1030
BsgI GTGCAG 1 cut(s) 182
BshFI GGCC 4 cut(s) 87, 357, 366, 855
BshNI GGYRCC 2 cut(s) 166, 686
BsiHKAI GWGCWC 4 cut(s) 507, 573, 679, 1196
BsiHKCI CYCGRG 4 cut(s) 103, 822, 1047, 1071
BsiSI CCGG 3 cut(s) 104, 320, 1179
BslFI GGGAC 5 cut(s) 77, 191, 622, 680, 899
BslI CCNNNNNNNGG 8 cut(s) 64, 105, 109, 110, 447, 862, 867, 1216
BsmFI GGGAC 5 cut(s) 77, 191, 622, 680, 899
BsnI GGCC 4 cut(s) 87, 357, 366, 855
BsoBI CYCGRG 4 cut(s) 103, 822, 1047, 1071
Bsp1286I GDGCHC 7 cut(s) 40, 53, 507, 573, 679, 1054, 1196
Bsp143I GATC 2 cut(s) 643, 1082
Bsp19I CCATGG 1 cut(s) 861
BspACI CCGC 3 cut(s) 72, 110, 170
BspANI GGCC 4 cut(s) 87, 357, 366, 855
BspCNI CTCAG 2 cut(s) 805, 934
BspLI GGNNCC 6 cut(s) 52, 168, 232, 316, 688, 706
BspPI GGATC 1 cut(s) 651
BspT107I GGYRCC 2 cut(s) 166, 686
BsrI ACTGG 3 cut(s) 89, 145, 1143
BssMI GATC 2 cut(s) 643, 1082
BssNI GRCGYC 2 cut(s) 167, 288
BssSI CACGAG 1 cut(s) 1032
BssT1I CCWWGG 3 cut(s) 624, 752, 861
Bst2BI CACGAG 1 cut(s) 1032
Bst2UI CCWGG 4 cut(s) 65, 210, 852, 1055
Bst4CI ACNGT 4 cut(s) 160, 509, 730, 842
Bst6I CTCTTC 2 cut(s) 122, 1136
BstACI GRCGYC 2 cut(s) 167, 288
BstC8I GCNNGC 3 cut(s) 112, 215, 260
BstDEI CTNAG 2 cut(s) 813, 942
BstDSI CCRYGG 2 cut(s) 156, 861
BstF5I GGATG 4 cut(s) 397, 580, 991, 1225
BstH2I RGCGCY 1 cut(s) 170
BstHHI GCGC 1 cut(s) 169
BstKTI GATC 2 cut(s) 646, 1085
BstMBI GATC 2 cut(s) 643, 1082
BstMWI GCNNNNNNNGC 9 cut(s) 264, 296, 363, 511, 577, 1034, 1043, 1049, 1073
BstNI CCWGG 4 cut(s) 65, 210, 852, 1055
BstSCI CCNGG 7 cut(s) 63, 102, 103, 208, 318, 850, 1053
BstSFI CTRYAG 2 cut(s) 729, 1119
BstSLI GKGCMC 1 cut(s) 40
BstV1I GCAGC 4 cut(s) 183, 439, 460, 1030
BstX2I RGATCY 1 cut(s) 643
BstXI CCANNNNNNTGG 2 cut(s) 163, 184
BstYI RGATCY 1 cut(s) 643
Bsu36I CCTNAGG 1 cut(s) 813
BsuI GTATCC 1 cut(s) 316
BsuRI GGCC 4 cut(s) 87, 357, 366, 855
BtgI CCRYGG 2 cut(s) 156, 861
BtgZI GCGATG 1 cut(s) 790
BtsCI GGATG 4 cut(s) 397, 580, 991, 1225
BtsI GCAGTG 1 cut(s) 610
BtsIMutI CAGTG 3 cut(s) 505, 610, 939
Cac8I GCNNGC 3 cut(s) 112, 215, 260
CfoI GCGC 1 cut(s) 169
Cfr13I GGNCC 2 cut(s) 86, 356
Cfr9I CCCGGG 1 cut(s) 103
CseI GACGC 1 cut(s) 296
Csp6I GTAC 1 cut(s) 1146
CviAII CATG 6 cut(s) 46, 292, 353, 368, 559, 862
CviQI GTAC 1 cut(s) 1146
DdeI CTNAG 2 cut(s) 813, 942
DinI GGCGCC 1 cut(s) 168
DpnI GATC 2 cut(s) 645, 1084
DpnII GATC 2 cut(s) 643, 1082
EaeI YGGCCR 1 cut(s) 364
Eam1104I CTCTTC 2 cut(s) 122, 1136
EarI CTCTTC 2 cut(s) 122, 1136
Ecl136II GAGCTC 3 cut(s) 571, 677, 1194
Eco130I CCWWGG 3 cut(s) 624, 752, 861
Eco24I GRGCYC 5 cut(s) 53, 573, 679, 1054, 1196
Eco53kI GAGCTC 3 cut(s) 571, 677, 1194
Eco57I CTGAAG 1 cut(s) 563
Eco81I CCTNAGG 1 cut(s) 813
Eco88I CYCGRG 4 cut(s) 103, 822, 1047, 1071
EcoICRI GAGCTC 3 cut(s) 571, 677, 1194
EcoRII CCWGG 4 cut(s) 63, 208, 850, 1053
EcoT14I CCWWGG 3 cut(s) 624, 752, 861
EcoT38I GRGCYC 5 cut(s) 53, 573, 679, 1054, 1196
EgeI GGCGCC 1 cut(s) 168
EheI GGCGCC 1 cut(s) 168
ErhI CCWWGG 3 cut(s) 624, 752, 861
FaeI CATG 6 cut(s) 49, 295, 356, 371, 562, 865
FaqI GGGAC 5 cut(s) 77, 191, 622, 680, 899
FatI CATG 6 cut(s) 45, 291, 352, 367, 558, 861
FauI CCCGC 2 cut(s) 65, 103
FblI GTMKAC 1 cut(s) 732
Fnu4HI GCNGC 5 cut(s) 170, 197, 453, 474, 1044
FokI GGATG 3 cut(s) 404, 567, 998
FriOI GRGCYC 5 cut(s) 53, 573, 679, 1054, 1196
Fsp4HI GCNGC 5 cut(s) 170, 197, 453, 474, 1044
FspBI CTAG 3 cut(s) 672, 683, 857
GlaI GCGC 1 cut(s) 168
GluI GCNGC 5 cut(s) 170, 197, 453, 474, 1044
GsuI CTGGAG 2 cut(s) 206, 1126
HaeII RGCGCY 1 cut(s) 170
HaeIII GGCC 4 cut(s) 87, 357, 366, 855
HapII CCGG 3 cut(s) 104, 320, 1179
HgaI GACGC 1 cut(s) 296
HhaI GCGC 1 cut(s) 169
Hin1I GRCGYC 2 cut(s) 167, 288
Hin1II CATG 6 cut(s) 49, 295, 356, 371, 562, 865
Hin6I GCGC 1 cut(s) 167
HinP1I GCGC 1 cut(s) 167
HincII GTYRAC 2 cut(s) 411, 726
HindII GTYRAC 2 cut(s) 411, 726
HinfI GANTC 4 cut(s) 204, 533, 668, 1061
HpaII CCGG 3 cut(s) 104, 320, 1179
HphI GGTGA 5 cut(s) 148, 397, 840, 1129, 1164
Hpy166II GTNNAC 3 cut(s) 411, 726, 733
Hpy188I TCNGA 4 cut(s) 238, 543, 1153, 1165
Hpy188III TCNNGA 9 cut(s) 23, 185, 223, 284, 485, 641, 672, 1197, 1217
Hpy8I GTNNAC 3 cut(s) 411, 726, 733
Hpy99I CGWCG 1 cut(s) 936
HpyAV CCTTC 5 cut(s) 62, 105, 183, 376, 538
HpyCH4III ACNGT 4 cut(s) 160, 509, 730, 842
HpyCH4V TGCA 6 cut(s) 199, 258, 377, 580, 603, 656
HpyF10VI GCNNNNNNNGC 9 cut(s) 264, 296, 363, 511, 577, 1034, 1043, 1049, 1073
HpyF3I CTNAG 2 cut(s) 813, 942
Hsp92I GRCGYC 2 cut(s) 167, 288
Hsp92II CATG 6 cut(s) 49, 295, 356, 371, 562, 865
HspAI GCGC 1 cut(s) 167
KasI GGCGCC 1 cut(s) 166
Kzo9I GATC 2 cut(s) 643, 1082
LmnI GCTCC 4 cut(s) 56, 568, 710, 1033
Lsp1109I GCAGC 4 cut(s) 183, 439, 460, 1030
LweI GCATC 2 cut(s) 382, 589
MaeI CTAG 3 cut(s) 672, 683, 857
MaeIII GTNAC 3 cut(s) 136, 520, 619
MalI GATC 2 cut(s) 645, 1084
MboI GATC 2 cut(s) 643, 1082
MboII GAAGA 6 cut(s) 139, 710, 740, 1013, 1123, 1197
MflI RGATCY 1 cut(s) 643
MhlI GDGCHC 7 cut(s) 40, 53, 507, 573, 679, 1054, 1196
MlsI TGGCCA 1 cut(s) 366
MluCI AATT 5 cut(s) 307, 575, 844, 953, 1201
MluNI TGGCCA 1 cut(s) 366
Mly113I GGCGCC 1 cut(s) 167
MlyI GAGTC 3 cut(s) 213, 662, 1070
Mox20I TGGCCA 1 cut(s) 366
MroXI GAANNNNTTC 1 cut(s) 1204
MscI TGGCCA 1 cut(s) 366
MseI TTAA 3 cut(s) 552, 905, 1101
MslI CAYNNNNRTG 1 cut(s) 161
Msp20I TGGCCA 1 cut(s) 366
MspI CCGG 3 cut(s) 104, 320, 1179
MspR9I CCNGG 7 cut(s) 65, 104, 105, 210, 320, 852, 1055
MvaI CCWGG 4 cut(s) 65, 210, 852, 1055
MwoI GCNNNNNNNGC 9 cut(s) 264, 296, 363, 511, 577, 1034, 1043, 1049, 1073
NarI GGCGCC 1 cut(s) 167
NciI CCSGG 3 cut(s) 104, 105, 320
NcoI CCATGG 1 cut(s) 861
NdeII GATC 2 cut(s) 643, 1082
NlaIII CATG 6 cut(s) 49, 295, 356, 371, 562, 865
NlaIV GGNNCC 6 cut(s) 52, 168, 232, 316, 688, 706
NmeAIII GCCGAG 1 cut(s) 21
NmuCI GTSAC 2 cut(s) 136, 520
OliI CACNNNNGTG 1 cut(s) 161
PaeR7I CTCGAG 3 cut(s) 822, 1047, 1071
PdmI GAANNNNTTC 1 cut(s) 1204
PfeI GAWTC 1 cut(s) 533
PflFI GACNNNGTC 1 cut(s) 29
PkrI GCNGC 5 cut(s) 171, 198, 454, 475, 1045
PleI GAGTC 3 cut(s) 212, 662, 1069
PluTI GGCGCC 1 cut(s) 170
PpsI GAGTC 3 cut(s) 212, 662, 1069
Psp124BI GAGCTC 3 cut(s) 573, 679, 1196
Psp6I CCWGG 4 cut(s) 63, 208, 850, 1053
PspGI CCWGG 4 cut(s) 63, 208, 850, 1053
PspN4I GGNNCC 6 cut(s) 52, 168, 232, 316, 688, 706
PspPI GGNCC 2 cut(s) 86, 356
PspXI VCTCGAGB 3 cut(s) 822, 1047, 1071
PsuI RGATCY 1 cut(s) 643
PsyI GACNNNGTC 1 cut(s) 29
RsaI GTAC 1 cut(s) 1147
RsaNI GTAC 1 cut(s) 1146
RseI CAYNNNNRTG 1 cut(s) 161
SacI GAGCTC 3 cut(s) 573, 679, 1196
SaqAI TTAA 3 cut(s) 552, 905, 1101
SatI GCNGC 5 cut(s) 170, 197, 453, 474, 1044
Sau3AI GATC 2 cut(s) 643, 1082
Sau96I GGNCC 2 cut(s) 86, 356
SchI GAGTC 3 cut(s) 213, 662, 1070
ScrFI CCNGG 7 cut(s) 65, 104, 105, 210, 320, 852, 1055
SduI GDGCHC 7 cut(s) 40, 53, 507, 573, 679, 1054, 1196
SfaNI GCATC 2 cut(s) 382, 589
SfcI CTRYAG 2 cut(s) 729, 1119
SfiI GGCCNNNNNGGCC 1 cut(s) 363
SfoI GGCGCC 1 cut(s) 168
Sfr274I CTCGAG 3 cut(s) 822, 1047, 1071
SlaI CTCGAG 3 cut(s) 822, 1047, 1071
SmaI CCCGGG 1 cut(s) 105
SmiMI CAYNNNNRTG 1 cut(s) 161
SmlI CTYRAG 3 cut(s) 822, 1047, 1071
SmoI CTYRAG 3 cut(s) 822, 1047, 1071
Sse9I AATT 5 cut(s) 307, 575, 844, 953, 1201
SsiI CCGC 3 cut(s) 72, 110, 170
SspDI GGCGCC 1 cut(s) 166
SspMI CTAG 3 cut(s) 672, 683, 857
SstI GAGCTC 3 cut(s) 573, 679, 1196
StyD4I CCNGG 7 cut(s) 63, 102, 103, 208, 318, 850, 1053
StyI CCWWGG 3 cut(s) 624, 752, 861
TaaI ACNGT 4 cut(s) 160, 509, 730, 842
TaqI TCGA 3 cut(s) 823, 1048, 1072
TasI AATT 5 cut(s) 307, 575, 844, 953, 1201
TatI WGTACW 1 cut(s) 1145
TauI GCSGC 1 cut(s) 172
TfiI GAWTC 1 cut(s) 533
Tru1I TTAA 3 cut(s) 552, 905, 1101
Tru9I TTAA 3 cut(s) 552, 905, 1101
TscAI CASTG 3 cut(s) 512, 610, 946
TseFI GTSAC 2 cut(s) 136, 520
TseI GCWGC 4 cut(s) 196, 452, 473, 1043
Tsp45I GTSAC 2 cut(s) 136, 520
TspDTI ATGAA 4 cut(s) 468, 711, 966, 1014
TspMI CCCGGG 1 cut(s) 103
TspRI CASTG 3 cut(s) 512, 610, 946
Tth111I GACNNNGTC 1 cut(s) 29
XapI RAATTY 3 cut(s) 307, 953, 1201
XbaI TCTAGA 1 cut(s) 671
XcmI CCANNNNNNNNNTGG 1 cut(s) 1217
XhoI CTCGAG 3 cut(s) 822, 1047, 1071
XmaI CCCGGG 1 cut(s) 103
XmiI GTMKAC 1 cut(s) 732
XmnI GAANNNNTTC 1 cut(s) 1204
XspI CTAG 3 cut(s) 672, 683, 857
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.