Rmu_sc0002111.1_g000034

phosphatase 2c

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002111.1
Physical Location & Seq
Forward (+)
185106 .. 189545
4440 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002111.1_g000034.1.cds

Sequence Viewer

Length: 1335 bp
ctgatcggagagactctgcaaatcggtaaagggagggtgagactttgtgattggtccaaaacgacgacggatcaggcggcggagacgaggacggagccggactgtatggtaggtccggtgggggaggcaagaaggggtggatatgactgtgtggttgggttggactgttttctggacatcgtcagggctttagggatgggctcgtgtctctccatcaccggtgacaactccgccggctacggccgggtgtcttccccggcgcagggcaacaagaggaggaagaggttgaccggcaactcgtcgtcaccggtttcgtcggcggcggcgagttccatggagatgtggctgcacaggattccggggaggttgttcctgaatggcttctctgatgtggcttccctgttcagcaagcaaggcaagaagggtgtcaatcaggacgctatgattgcttgggagaatttcggctccaaggaagatacaatattttgtggtgtttttgatgggcatggtccttgtggtcatatggtggcgaagaaggtgagggattctctacctttgaaggtcagctcacaatgggtgctgaacaccagcgccgcggatactaaccacgccggtgcatctgtggagaacaaggacagccatggtgaatttttcgccacattgaaagattcgtttttgaaggcttttaaggtcatggacaaggagcttaagttgcatcctcgtattgattgctattgcagtgggacaactgcagttacgttggtcaagcagggtcaggatcttgttattgcaaatattggggactctagagctgtgctaggcacaagagatgaagggggttctcttgttgcagttcagttgaccgtagacttaaaaccaaatcttccaagggaagccgagaggattacgttatgtaaaggtcgagtatttgctctccacaacgagcctgatgtcactcgagtttggctgcccaacagtaattcacctgggcttgctatggcccgggcttttggagatttctgcctaaaggattatggtttaatctctgtccctgatgtttcttatcgtcgcctcactgagaaggatgaatttgtagtactggctacagatgggatctgggatgttctctcaaacaaagaagttgtggatatagtggcagcaaccccacgaccctctgctgctcgagccctggtggagtcagccaatcgagcttggagatttaaacacccatatgccaaggttgatgattgtgccgttgtttgcctcttcctcacttccggtgcttcagacaatacttccctttcctcaccagaggagaagatgaactcaatataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

444

Amino Acids

48.02

Weight (kDa)

7.61

Isoelectric Point (pI)

30.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 867
AccII CGCG 1 cut(s) 596
AciI CCGC 7 cut(s) 77, 80, 231, 320, 323, 594, 596
AclWI GGATC 3 cut(s) 78, 786, 1121
AcoI YGGCCR 1 cut(s) 241
AcsI RAATTY 3 cut(s) 457, 647, 1088
AcuI CTGAAG 1 cut(s) 1269
AfaI GTAC 1 cut(s) 1098
AfiI CCNNNNNNNGG 2 cut(s) 262, 263
AflII CTTAAG 1 cut(s) 707
AgeI ACCGGT 2 cut(s) 218, 307
AgsI TTSAA 3 cut(s) 559, 664, 679
AjnI CCWGG 2 cut(s) 985, 1188
AleI CACNNNNGTG 1 cut(s) 612
AluBI AGCT 4 cut(s) 567, 706, 812, 1211
AluI AGCT 4 cut(s) 567, 706, 812, 1211
Alw26I GTCTC 4 cut(s) 5, 34, 77, 212
AlwI GGATC 3 cut(s) 78, 786, 1121
Ama87I CYCGRG 3 cut(s) 957, 1002, 1182
AoxI GGCC 2 cut(s) 241, 999
ApeKI GCWGC 4 cut(s) 346, 967, 1157, 1178
ApoI RAATTY 3 cut(s) 457, 647, 1088
AsiGI ACCGGT 2 cut(s) 218, 307
Asp700I GAANNNNTTC 1 cut(s) 380
AspLEI GCGC 2 cut(s) 262, 593
AspS9I GGNCC 4 cut(s) 54, 113, 509, 1000
AsuC2I CCSGG 5 cut(s) 245, 257, 360, 1003, 1004
AsuHPI GGTGA 8 cut(s) 49, 208, 233, 297, 550, 656, 975, 1299
AvaI CYCGRG 3 cut(s) 957, 1002, 1182
AvaII GGWCC 3 cut(s) 54, 113, 509
BanII GRGCYC 2 cut(s) 203, 1189
BauI CACGAG 1 cut(s) 202
BbsI GAAGAC 1 cut(s) 243
BbvI GCAGC 4 cut(s) 333, 954, 1165, 1169
BccI CCATC 4 cut(s) 190, 221, 494, 1103
BceAI ACGGC 2 cut(s) 256, 1238
BciT130I CCWGG 2 cut(s) 987, 1190
BciVI GTATCC 1 cut(s) 592
BcnI CCSGG 5 cut(s) 245, 257, 360, 1003, 1004
BcoDI GTCTC 4 cut(s) 5, 34, 77, 212
BfaI CTAG 2 cut(s) 807, 818
BfmI CTRYAG 2 cut(s) 750, 1104
BfoI RGCGCY 1 cut(s) 594
BfrI CTTAAG 1 cut(s) 707
BfuI GTATCC 1 cut(s) 592
BisI GCNGC 8 cut(s) 78, 321, 324, 347, 594, 968, 1158, 1179
BlsI GCNGC 8 cut(s) 79, 322, 325, 348, 595, 969, 1159, 1180
BmcAI AGTACT 1 cut(s) 1098
Bme1390I CCNGG 7 cut(s) 245, 257, 360, 987, 1003, 1004, 1190
Bme18I GGWCC 3 cut(s) 54, 113, 509
BmeT110I CYCGRG 3 cut(s) 957, 1002, 1182
BmgT120I GGNCC 4 cut(s) 54, 113, 509, 1000
BmiI GGNNCC 2 cut(s) 96, 466
BmrFI CCNGG 7 cut(s) 245, 257, 360, 987, 1003, 1004, 1190
BmsI GCATC 2 cut(s) 626, 724
BpiI GAAGAC 1 cut(s) 243
BplI GAGNNNNNCTC 2 cut(s) 532, 564
BpuMI CCSGG 5 cut(s) 245, 257, 360, 1003, 1004
BsaWI WCCGGW 4 cut(s) 115, 218, 307, 1277
BsaXI ACNNNNNCTCC 2 cut(s) 695, 725
Bsc4I CCNNNNNNNGG 2 cut(s) 262, 263
Bse118I RCCGGY 5 cut(s) 218, 233, 290, 307, 611
Bse1I ACTGG 1 cut(s) 1104
BseBI CCWGG 2 cut(s) 987, 1190
BseGI GGATG 4 cut(s) 201, 715, 1090, 1126
BseLI CCNNNNNNNGG 2 cut(s) 262, 263
BseMII CTCAG 1 cut(s) 1068
BseNI ACTGG 1 cut(s) 1104
BseRI GAGGAG 2 cut(s) 289, 1328
BseX3I CGGCCG 1 cut(s) 241
BseXI GCAGC 4 cut(s) 333, 954, 1165, 1169
BsgI GTGCAG 1 cut(s) 332
Bsh1236I CGCG 1 cut(s) 596
Bsh1285I CGRYCG 1 cut(s) 244
BshFI GGCC 2 cut(s) 243, 1001
BshTI ACCGGT 2 cut(s) 218, 307
BsiEI CGRYCG 1 cut(s) 244
BsiHKCI CYCGRG 3 cut(s) 957, 1002, 1182
BslFI GGGAC 3 cut(s) 757, 815, 1034
BslI CCNNNNNNNGG 2 cut(s) 262, 263
BsmAI GTCTC 4 cut(s) 5, 34, 77, 212
BsmBI CGTCTC 1 cut(s) 77
BsmFI GGGAC 3 cut(s) 757, 815, 1034
BsnI GGCC 2 cut(s) 243, 1001
BsoBI CYCGRG 3 cut(s) 957, 1002, 1182
Bsp1286I GDGCHC 2 cut(s) 203, 1189
Bsp143I GATC 4 cut(s) 3, 70, 778, 1113
Bsp19I CCATGG 2 cut(s) 333, 640
BspACI CCGC 7 cut(s) 77, 80, 231, 320, 323, 594, 596
BspANI GGCC 2 cut(s) 243, 1001
BspCNI CTCAG 1 cut(s) 1069
BspFNI CGCG 1 cut(s) 596
BspLI GGNNCC 2 cut(s) 96, 466
BspMAI CTGCAG 1 cut(s) 754
BspPI GGATC 3 cut(s) 78, 786, 1121
BspTI CTTAAG 1 cut(s) 707
BsrFI RCCGGY 5 cut(s) 218, 233, 290, 307, 611
BsrI ACTGG 1 cut(s) 1104
BssAI RCCGGY 5 cut(s) 218, 233, 290, 307, 611
BssMI GATC 4 cut(s) 3, 70, 778, 1113
BssSI CACGAG 1 cut(s) 202
BssT1I CCWWGG 5 cut(s) 333, 468, 640, 887, 1236
Bst2BI CACGAG 1 cut(s) 202
Bst2UI CCWGG 2 cut(s) 987, 1190
Bst4CI ACNGT 5 cut(s) 104, 149, 167, 865, 977
Bst6I CTCTTC 2 cut(s) 275, 1271
BstAFI CTTAAG 1 cut(s) 707
BstC8I GCNNGC 3 cut(s) 235, 410, 993
BstDEI CTNAG 1 cut(s) 1077
BstDSI CCRYGG 3 cut(s) 333, 594, 640
BstF5I GGATG 4 cut(s) 201, 715, 1090, 1126
BstFNI CGCG 1 cut(s) 596
BstH2I RGCGCY 1 cut(s) 594
BstHHI GCGC 2 cut(s) 262, 593
BstKTI GATC 4 cut(s) 6, 73, 781, 1116
BstMAI GTCTC 4 cut(s) 5, 34, 77, 212
BstMBI GATC 4 cut(s) 3, 70, 778, 1113
BstMCI CGRYCG 1 cut(s) 244
BstMWI GCNNNNNNNGC 5 cut(s) 414, 446, 712, 1184, 1208
BstNI CCWGG 2 cut(s) 987, 1190
BstSCI CCNGG 7 cut(s) 243, 255, 358, 985, 1001, 1002, 1188
BstSFI CTRYAG 2 cut(s) 750, 1104
BstUI CGCG 1 cut(s) 596
BstV1I GCAGC 4 cut(s) 333, 954, 1165, 1169
BstV2I GAAGAC 1 cut(s) 243
BstX2I RGATCY 2 cut(s) 778, 1113
BstYI RGATCY 2 cut(s) 778, 1113
BstZI CGGCCG 1 cut(s) 241
BsuI GTATCC 1 cut(s) 592
BsuRI GGCC 2 cut(s) 243, 1001
BtgI CCRYGG 3 cut(s) 333, 594, 640
BtsCI GGATG 4 cut(s) 201, 715, 1090, 1126
BtsI GCAGTG 1 cut(s) 745
BtsIMutI CAGTG 2 cut(s) 745, 1074
Cac8I GCNNGC 3 cut(s) 235, 410, 993
CfoI GCGC 2 cut(s) 262, 593
Cfr10I RCCGGY 5 cut(s) 218, 233, 290, 307, 611
Cfr13I GGNCC 4 cut(s) 54, 113, 509, 1000
Cfr42I CCGCGG 1 cut(s) 597
Cfr9I CCCGGG 1 cut(s) 1002
CseI GACGC 1 cut(s) 446
Csp6I GTAC 1 cut(s) 1097
CspAI ACCGGT 2 cut(s) 218, 307
CviAII CATG 4 cut(s) 334, 506, 641, 694
CviQI GTAC 1 cut(s) 1097
DdeI CTNAG 1 cut(s) 1077
DpnI GATC 4 cut(s) 5, 72, 780, 1115
DpnII GATC 4 cut(s) 3, 70, 778, 1113
DraI TTTAAA 1 cut(s) 1222
EaeI YGGCCR 1 cut(s) 241
EagI CGGCCG 1 cut(s) 241
Eam1104I CTCTTC 2 cut(s) 275, 1271
EarI CTCTTC 2 cut(s) 275, 1271
EciI GGCGGA 2 cut(s) 95, 220
EclXI CGGCCG 1 cut(s) 241
Eco130I CCWWGG 5 cut(s) 333, 468, 640, 887, 1236
Eco24I GRGCYC 2 cut(s) 203, 1189
Eco47I GGWCC 3 cut(s) 54, 113, 509
Eco52I CGGCCG 1 cut(s) 241
Eco57I CTGAAG 1 cut(s) 1269
Eco88I CYCGRG 3 cut(s) 957, 1002, 1182
EcoRII CCWGG 2 cut(s) 985, 1188
EcoT14I CCWWGG 5 cut(s) 333, 468, 640, 887, 1236
EcoT38I GRGCYC 2 cut(s) 203, 1189
ErhI CCWWGG 5 cut(s) 333, 468, 640, 887, 1236
Esp3I CGTCTC 1 cut(s) 77
FaeI CATG 4 cut(s) 337, 509, 644, 697
FaqI GGGAC 3 cut(s) 757, 815, 1034
FatI CATG 4 cut(s) 333, 505, 640, 693
FauNDI CATATG 2 cut(s) 522, 1231
FblI GTMKAC 1 cut(s) 867
Fnu4HI GCNGC 8 cut(s) 78, 321, 324, 347, 594, 968, 1158, 1179
FokI GGATG 4 cut(s) 208, 702, 1097, 1133
FriOI GRGCYC 2 cut(s) 203, 1189
Fsp4HI GCNGC 8 cut(s) 78, 321, 324, 347, 594, 968, 1158, 1179
FspBI CTAG 2 cut(s) 807, 818
GlaI GCGC 2 cut(s) 261, 592
GluI GCNGC 8 cut(s) 78, 321, 324, 347, 594, 968, 1158, 1179
HaeII RGCGCY 1 cut(s) 594
HaeIII GGCC 2 cut(s) 243, 1001
HgaI GACGC 1 cut(s) 446
HhaI GCGC 2 cut(s) 262, 593
Hin1II CATG 4 cut(s) 337, 509, 644, 697
Hin6I GCGC 2 cut(s) 260, 591
HinP1I GCGC 2 cut(s) 260, 591
HincII GTYRAC 2 cut(s) 288, 861
HindII GTYRAC 2 cut(s) 288, 861
HinfI GANTC 6 cut(s) 13, 355, 545, 668, 803, 1196
HphI GGTGA 8 cut(s) 49, 208, 233, 297, 550, 656, 975, 1299
Hpy166II GTNNAC 3 cut(s) 288, 861, 868
Hpy188I TCNGA 3 cut(s) 8, 388, 1288
Hpy188III TCNNGA 5 cut(s) 173, 373, 434, 776, 807
Hpy8I GTNNAC 3 cut(s) 288, 861, 868
Hpy99I CGWCG 5 cut(s) 67, 70, 304, 319, 1071
HpyAV CCTTC 7 cut(s) 126, 415, 529, 553, 673, 827, 1075
HpyCH4III ACNGT 5 cut(s) 104, 149, 167, 865, 977
HpyCH4IV ACGT 2 cut(s) 758, 908
HpyCH4V TGCA 8 cut(s) 19, 349, 617, 715, 738, 752, 791, 851
HpyF10VI GCNNNNNNNGC 5 cut(s) 414, 446, 712, 1184, 1208
HpyF3I CTNAG 1 cut(s) 1077
HpySE526I ACGT 2 cut(s) 758, 908
Hsp92II CATG 4 cut(s) 337, 509, 644, 697
HspAI GCGC 2 cut(s) 260, 591
KroI GCCGGC 1 cut(s) 233
KroNI GCCGGC 1 cut(s) 235
KspI CCGCGG 1 cut(s) 597
Kzo9I GATC 4 cut(s) 3, 70, 778, 1113
LmnI GCTCC 3 cut(s) 94, 470, 703
Lsp1109I GCAGC 4 cut(s) 333, 954, 1165, 1169
LweI GCATC 2 cut(s) 626, 724
MaeI CTAG 2 cut(s) 807, 818
MaeII ACGT 2 cut(s) 758, 908
MaeIII GTNAC 4 cut(s) 221, 303, 754, 952
MalI GATC 4 cut(s) 5, 72, 780, 1115
MboI GATC 4 cut(s) 3, 70, 778, 1113
MboII GAAGA 7 cut(s) 243, 292, 485, 544, 875, 1258, 1330
MflI RGATCY 2 cut(s) 778, 1113
MhlI GDGCHC 2 cut(s) 203, 1189
MluCI AATT 4 cut(s) 457, 647, 979, 1088
MlyI GAGTC 3 cut(s) 7, 797, 1205
MmeI TCCRAC 1 cut(s) 141
MroNI GCCGGC 1 cut(s) 233
MroXI GAANNNNTTC 1 cut(s) 380
MseI TTAA 5 cut(s) 687, 708, 872, 1040, 1221
MslI CAYNNNNRTG 3 cut(s) 338, 612, 1230
MspA1I CMGCKG 1 cut(s) 596
MspCI CTTAAG 1 cut(s) 707
MspR9I CCNGG 7 cut(s) 245, 257, 360, 987, 1003, 1004, 1190
MvaI CCWGG 2 cut(s) 987, 1190
MvnI CGCG 1 cut(s) 596
MwoI GCNNNNNNNGC 5 cut(s) 414, 446, 712, 1184, 1208
NaeI GCCGGC 1 cut(s) 235
NciI CCSGG 5 cut(s) 245, 257, 360, 1003, 1004
NcoI CCATGG 2 cut(s) 333, 640
NdeI CATATG 2 cut(s) 522, 1231
NdeII GATC 4 cut(s) 3, 70, 778, 1113
NgoMIV GCCGGC 1 cut(s) 233
NlaIII CATG 4 cut(s) 337, 509, 644, 697
NlaIV GGNNCC 2 cut(s) 96, 466
NmeAIII GCCGAG 1 cut(s) 922
NmuCI GTSAC 3 cut(s) 221, 303, 952
OliI CACNNNNGTG 1 cut(s) 612
PaeR7I CTCGAG 2 cut(s) 957, 1182
PcsI WCGNNNNNNNCGW 1 cut(s) 323
PdiI GCCGGC 1 cut(s) 235
PdmI GAANNNNTTC 1 cut(s) 380
PfeI GAWTC 3 cut(s) 355, 545, 668
PflFI GACNNNGTC 1 cut(s) 179
PinAI ACCGGT 2 cut(s) 218, 307
PkrI GCNGC 8 cut(s) 79, 322, 325, 348, 595, 969, 1159, 1180
PleI GAGTC 3 cut(s) 7, 797, 1204
PpsI GAGTC 3 cut(s) 7, 797, 1204
Psp6I CCWGG 2 cut(s) 985, 1188
PspGI CCWGG 2 cut(s) 985, 1188
PspN4I GGNNCC 2 cut(s) 96, 466
PspPI GGNCC 4 cut(s) 54, 113, 509, 1000
PspXI VCTCGAGB 2 cut(s) 957, 1182
PstI CTGCAG 1 cut(s) 754
PsuI RGATCY 2 cut(s) 778, 1113
PsyI GACNNNGTC 1 cut(s) 179
RsaI GTAC 1 cut(s) 1098
RsaNI GTAC 1 cut(s) 1097
RseI CAYNNNNRTG 3 cut(s) 338, 612, 1230
SacII CCGCGG 1 cut(s) 597
SaqAI TTAA 5 cut(s) 687, 708, 872, 1040, 1221
SatI GCNGC 8 cut(s) 78, 321, 324, 347, 594, 968, 1158, 1179
Sau3AI GATC 4 cut(s) 3, 70, 778, 1113
Sau96I GGNCC 4 cut(s) 54, 113, 509, 1000
ScaI AGTACT 1 cut(s) 1098
SchI GAGTC 3 cut(s) 7, 797, 1205
ScrFI CCNGG 7 cut(s) 245, 257, 360, 987, 1003, 1004, 1190
SduI GDGCHC 2 cut(s) 203, 1189
SfaNI GCATC 2 cut(s) 626, 724
SfcI CTRYAG 2 cut(s) 750, 1104
Sfr274I CTCGAG 2 cut(s) 957, 1182
Sfr303I CCGCGG 1 cut(s) 597
SgrAI CRCCGGYG 2 cut(s) 218, 611
SgrBI CCGCGG 1 cut(s) 597
SinI GGWCC 3 cut(s) 54, 113, 509
SlaI CTCGAG 2 cut(s) 957, 1182
SmaI CCCGGG 1 cut(s) 1004
SmiMI CAYNNNNRTG 3 cut(s) 338, 612, 1230
SmlI CTYRAG 3 cut(s) 707, 957, 1182
SmoI CTYRAG 3 cut(s) 707, 957, 1182
SrfI GCCCGGGC 1 cut(s) 1004
Sse9I AATT 4 cut(s) 457, 647, 979, 1088
SsiI CCGC 7 cut(s) 77, 80, 231, 320, 323, 594, 596
SspI AATATT 2 cut(s) 483, 796
SspMI CTAG 2 cut(s) 807, 818
StyD4I CCNGG 7 cut(s) 243, 255, 358, 985, 1001, 1002, 1188
StyI CCWWGG 5 cut(s) 333, 468, 640, 887, 1236
TaaI ACNGT 5 cut(s) 104, 149, 167, 865, 977
TaiI ACGT 2 cut(s) 761, 911
TaqI TCGA 4 cut(s) 922, 958, 1183, 1207
TasI AATT 4 cut(s) 457, 647, 979, 1088
TatI WGTACW 1 cut(s) 1096
TauI GCSGC 4 cut(s) 80, 323, 326, 596
TfiI GAWTC 3 cut(s) 355, 545, 668
Tru1I TTAA 5 cut(s) 687, 708, 872, 1040, 1221
Tru9I TTAA 5 cut(s) 687, 708, 872, 1040, 1221
TscAI CASTG 2 cut(s) 745, 1081
TseFI GTSAC 3 cut(s) 221, 303, 952
TseI GCWGC 4 cut(s) 346, 967, 1157, 1178
Tsp45I GTSAC 3 cut(s) 221, 303, 952
TspDTI ATGAA 2 cut(s) 846, 1101
TspGWI ACGGA 2 cut(s) 83, 107
TspMI CCCGGG 1 cut(s) 1002
TspRI CASTG 2 cut(s) 745, 1081
Tth111I GACNNNGTC 1 cut(s) 179
Vha464I CTTAAG 1 cut(s) 707
VpaK11BI GGWCC 3 cut(s) 54, 113, 509
XapI RAATTY 3 cut(s) 457, 647, 1088
XbaI TCTAGA 1 cut(s) 806
XhoI CTCGAG 2 cut(s) 957, 1182
XmaI CCCGGG 1 cut(s) 1002
XmiI GTMKAC 1 cut(s) 867
XmnI GAANNNNTTC 1 cut(s) 380
XspI CTAG 2 cut(s) 807, 818
ZrmI AGTACT 1 cut(s) 1098
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.