Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G43480 AT5G24070 |
| fragaria_vesca | FvH4_3g26850 |
| malus_domestica | MD04G1046400.v1.1 |
| prunus_persica | Prupe.1G199900_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0407891 |
| rosa_laevigata | RLG00000008691 |
| rosa_multiflora | Rmu_co8108400.1_g000001 Rmu_sc0029075.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00352430 |
| rosa_rugosa | Rorug04G0082000 |
| rosa_samantha | Rh4AG147100 Rh4BG144600 Rh4CG153900 Rh4DG141100 |
| rosa_wichuraiana | Rw4G012080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 180 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 537 |
| AciI | CCGC | 3 cut(s) | 423, 731, 761 |
| AclI | AACGTT | 2 cut(s) | 379, 697 |
| AclWI | GGATC | 1 cut(s) | 522 |
| AcsI | RAATTY | 1 cut(s) | 1014 |
| AdeI | CACNNNGTG | 1 cut(s) | 187 |
| AfaI | GTAC | 3 cut(s) | 656, 815, 846 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 49, 50, 391, 537, 691, 785 |
| AgsI | TTSAA | 4 cut(s) | 374, 562, 615, 664 |
| AjnI | CCWGG | 3 cut(s) | 385, 969, 987 |
| AluBI | AGCT | 6 cut(s) | 69, 229, 724, 842, 865, 965 |
| AluI | AGCT | 6 cut(s) | 69, 229, 724, 842, 865, 965 |
| Alw21I | GWGCWC | 1 cut(s) | 285 |
| Alw26I | GTCTC | 2 cut(s) | 400, 477 |
| AlwI | GGATC | 1 cut(s) | 522 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 868 |
| Ama87I | CYCGRG | 1 cut(s) | 778 |
| AoxI | GGCC | 1 cut(s) | 487 |
| ApeKI | GCWGC | 3 cut(s) | 92, 545, 908 |
| ApoI | RAATTY | 1 cut(s) | 1014 |
| AspLEI | GCGC | 4 cut(s) | 452, 550, 608, 791 |
| AspS9I | GGNCC | 1 cut(s) | 293 |
| AsuC2I | CCSGG | 2 cut(s) | 779, 780 |
| AsuHPI | GGTGA | 3 cut(s) | 211, 516, 887 |
| AvaI | CYCGRG | 1 cut(s) | 778 |
| AvaII | GGWCC | 1 cut(s) | 293 |
| AxyI | CCTNAGG | 1 cut(s) | 233 |
| BanI | GGYRCC | 1 cut(s) | 180 |
| Bbv12I | GWGCWC | 1 cut(s) | 285 |
| BbvI | GCAGC | 3 cut(s) | 79, 532, 895 |
| BccI | CCATC | 5 cut(s) | 224, 284, 463, 539, 952 |
| BceAI | ACGGC | 2 cut(s) | 419, 502 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 990, 1024 |
| BciT130I | CCWGG | 3 cut(s) | 387, 971, 989 |
| BclI | TGATCA | 1 cut(s) | 856 |
| BcnI | CCSGG | 2 cut(s) | 779, 780 |
| BcoDI | GTCTC | 2 cut(s) | 400, 477 |
| BfaI | CTAG | 6 cut(s) | 56, 77, 426, 498, 567, 822 |
| BisI | GCNGC | 4 cut(s) | 93, 423, 546, 909 |
| BlsI | GCNGC | 4 cut(s) | 94, 424, 547, 910 |
| Bme1390I | CCNGG | 5 cut(s) | 387, 779, 780, 971, 989 |
| Bme18I | GGWCC | 1 cut(s) | 293 |
| BmeT110I | CYCGRG | 1 cut(s) | 778 |
| BmgT120I | GGNCC | 1 cut(s) | 293 |
| BmiI | GGNNCC | 1 cut(s) | 182 |
| BmrFI | CCNGG | 5 cut(s) | 387, 779, 780, 971, 989 |
| BmsI | GCATC | 3 cut(s) | 262, 284, 421 |
| BpuMI | CCSGG | 2 cut(s) | 779, 780 |
| BsaI | GGTCTC | 1 cut(s) | 400 |
| BsaJI | CCNNGG | 6 cut(s) | 385, 510, 601, 778, 779, 988 |
| BsaWI | WCCGGW | 1 cut(s) | 954 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 327, 357 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 49, 50, 391, 537, 691, 785 |
| Bse118I | RCCGGY | 1 cut(s) | 911 |
| Bse21I | CCTNAGG | 1 cut(s) | 233 |
| BseBI | CCWGG | 3 cut(s) | 387, 971, 989 |
| BseDI | CCNNGG | 6 cut(s) | 385, 510, 601, 778, 779, 988 |
| BseGI | GGATG | 3 cut(s) | 506, 583, 963 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 49, 50, 391, 537, 691, 785 |
| BseMII | CTCAG | 3 cut(s) | 56, 247, 315 |
| BseRI | GAGGAG | 2 cut(s) | 221, 590 |
| BseXI | GCAGC | 3 cut(s) | 79, 532, 895 |
| BsgI | GTGCAG | 2 cut(s) | 209, 297 |
| BshFI | GGCC | 1 cut(s) | 489 |
| BshNI | GGYRCC | 1 cut(s) | 180 |
| BsiHKAI | GWGCWC | 1 cut(s) | 285 |
| BsiHKCI | CYCGRG | 1 cut(s) | 778 |
| BsiSI | CCGG | 3 cut(s) | 779, 912, 955 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 49, 50, 391, 537, 691, 785 |
| BsmAI | GTCTC | 2 cut(s) | 400, 477 |
| BsmBI | CGTCTC | 1 cut(s) | 477 |
| BsnI | GGCC | 1 cut(s) | 489 |
| Bso31I | GGTCTC | 1 cut(s) | 400 |
| BsoBI | CYCGRG | 1 cut(s) | 778 |
| Bsp1286I | GDGCHC | 1 cut(s) | 285 |
| Bsp1407I | TGTACA | 1 cut(s) | 654 |
| Bsp143I | GATC | 3 cut(s) | 514, 646, 856 |
| BspACI | CCGC | 3 cut(s) | 423, 731, 761 |
| BspANI | GGCC | 1 cut(s) | 489 |
| BspCNI | CTCAG | 3 cut(s) | 57, 246, 314 |
| BspHI | TCATGA | 1 cut(s) | 157 |
| BspLI | GGNNCC | 1 cut(s) | 182 |
| BspPI | GGATC | 1 cut(s) | 522 |
| BspT107I | GGYRCC | 1 cut(s) | 180 |
| BspTNI | GGTCTC | 1 cut(s) | 400 |
| BsrFI | RCCGGY | 1 cut(s) | 911 |
| BsrGI | TGTACA | 1 cut(s) | 654 |
| BssAI | RCCGGY | 1 cut(s) | 911 |
| BssECI | CCNNGG | 6 cut(s) | 385, 510, 601, 778, 779, 988 |
| BssMI | GATC | 3 cut(s) | 514, 646, 856 |
| Bst2UI | CCWGG | 3 cut(s) | 387, 971, 989 |
| Bst4CI | ACNGT | 2 cut(s) | 528, 870 |
| Bst6I | CTCTTC | 1 cut(s) | 475 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 187 |
| BstAUI | TGTACA | 1 cut(s) | 654 |
| BstC8I | GCNNGC | 3 cut(s) | 448, 543, 731 |
| BstDEI | CTNAG | 4 cut(s) | 65, 233, 301, 885 |
| BstDSI | CCRYGG | 1 cut(s) | 510 |
| BstF5I | GGATG | 3 cut(s) | 506, 583, 963 |
| BstHHI | GCGC | 4 cut(s) | 452, 550, 608, 791 |
| BstKTI | GATC | 3 cut(s) | 517, 649, 859 |
| BstMAI | GTCTC | 2 cut(s) | 400, 477 |
| BstMBI | GATC | 3 cut(s) | 514, 646, 856 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 187, 431, 547, 730 |
| BstNI | CCWGG | 3 cut(s) | 387, 971, 989 |
| BstSCI | CCNGG | 5 cut(s) | 385, 777, 778, 969, 987 |
| BstV1I | GCAGC | 3 cut(s) | 79, 532, 895 |
| BstX2I | RGATCY | 1 cut(s) | 514 |
| BstYI | RGATCY | 1 cut(s) | 514 |
| Bsu36I | CCTNAGG | 1 cut(s) | 233 |
| BsuRI | GGCC | 1 cut(s) | 489 |
| BtgI | CCRYGG | 1 cut(s) | 510 |
| BtsCI | GGATG | 3 cut(s) | 506, 583, 963 |
| BtsIMutI | CAGTG | 1 cut(s) | 285 |
| Cac8I | GCNNGC | 3 cut(s) | 448, 543, 731 |
| CaiI | CAGNNNCTG | 1 cut(s) | 868 |
| CciI | TCATGA | 1 cut(s) | 157 |
| CfoI | GCGC | 4 cut(s) | 452, 550, 608, 791 |
| Cfr10I | RCCGGY | 1 cut(s) | 911 |
| Cfr13I | GGNCC | 1 cut(s) | 293 |
| Cfr9I | CCCGGG | 1 cut(s) | 778 |
| CsiI | ACCWGGT | 1 cut(s) | 969 |
| Csp6I | GTAC | 3 cut(s) | 655, 814, 845 |
| CviAII | CATG | 5 cut(s) | 45, 158, 537, 691, 715 |
| CviQI | GTAC | 3 cut(s) | 655, 814, 845 |
| DdeI | CTNAG | 4 cut(s) | 65, 233, 301, 885 |
| DpnI | GATC | 3 cut(s) | 516, 648, 858 |
| DpnII | GATC | 3 cut(s) | 514, 646, 856 |
| DraIII | CACNNNGTG | 1 cut(s) | 187 |
| Eam1104I | CTCTTC | 1 cut(s) | 475 |
| EarI | CTCTTC | 1 cut(s) | 475 |
| Eco31I | GGTCTC | 1 cut(s) | 400 |
| Eco47I | GGWCC | 1 cut(s) | 293 |
| Eco81I | CCTNAGG | 1 cut(s) | 233 |
| Eco88I | CYCGRG | 1 cut(s) | 778 |
| EcoRI | GAATTC | 1 cut(s) | 1014 |
| EcoRII | CCWGG | 3 cut(s) | 385, 969, 987 |
| EcoT22I | ATGCAT | 1 cut(s) | 277 |
| Esp3I | CGTCTC | 1 cut(s) | 477 |
| FaeI | CATG | 5 cut(s) | 48, 161, 540, 694, 718 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 831, 863 |
| FatI | CATG | 5 cut(s) | 44, 157, 536, 690, 714 |
| FauI | CCCGC | 2 cut(s) | 738, 768 |
| FbaI | TGATCA | 1 cut(s) | 856 |
| Fnu4HI | GCNGC | 4 cut(s) | 93, 423, 546, 909 |
| FokI | GGATG | 3 cut(s) | 493, 590, 970 |
| Fsp4HI | GCNGC | 4 cut(s) | 93, 423, 546, 909 |
| FspBI | CTAG | 6 cut(s) | 56, 77, 426, 498, 567, 822 |
| GlaI | GCGC | 4 cut(s) | 451, 549, 607, 790 |
| GluI | GCNGC | 4 cut(s) | 93, 423, 546, 909 |
| HaeIII | GGCC | 1 cut(s) | 489 |
| HapII | CCGG | 3 cut(s) | 779, 912, 955 |
| HhaI | GCGC | 4 cut(s) | 452, 550, 608, 791 |
| Hin1II | CATG | 5 cut(s) | 48, 161, 540, 694, 718 |
| Hin6I | GCGC | 4 cut(s) | 450, 548, 606, 789 |
| HinP1I | GCGC | 4 cut(s) | 450, 548, 606, 789 |
| HincII | GTYRAC | 1 cut(s) | 123 |
| HindII | GTYRAC | 1 cut(s) | 123 |
| HindIII | AAGCTT | 1 cut(s) | 722 |
| HinfI | GANTC | 2 cut(s) | 809, 825 |
| HpaII | CCGG | 3 cut(s) | 779, 912, 955 |
| HphI | GGTGA | 3 cut(s) | 211, 516, 887 |
| Hpy166II | GTNNAC | 1 cut(s) | 123 |
| Hpy188I | TCNGA | 5 cut(s) | 66, 250, 304, 712, 930 |
| Hpy188III | TCNNGA | 3 cut(s) | 158, 371, 822 |
| Hpy8I | GTNNAC | 1 cut(s) | 123 |
| HpyAV | CCTTC | 1 cut(s) | 739 |
| HpyCH4III | ACNGT | 2 cut(s) | 528, 870 |
| HpyCH4IV | ACGT | 2 cut(s) | 379, 697 |
| HpyCH4V | TGCA | 3 cut(s) | 190, 275, 314 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 187, 431, 547, 730 |
| HpyF3I | CTNAG | 4 cut(s) | 65, 233, 301, 885 |
| HpySE526I | ACGT | 2 cut(s) | 379, 697 |
| Hsp92II | CATG | 5 cut(s) | 48, 161, 540, 694, 718 |
| HspAI | GCGC | 4 cut(s) | 450, 548, 606, 789 |
| Ksp22I | TGATCA | 1 cut(s) | 856 |
| Kzo9I | GATC | 3 cut(s) | 514, 646, 856 |
| LmnI | GCTCC | 3 cut(s) | 234, 288, 962 |
| Lsp1109I | GCAGC | 3 cut(s) | 79, 532, 895 |
| LweI | GCATC | 3 cut(s) | 262, 284, 421 |
| MabI | ACCWGGT | 1 cut(s) | 969 |
| MaeI | CTAG | 6 cut(s) | 56, 77, 426, 498, 567, 822 |
| MaeII | ACGT | 2 cut(s) | 379, 697 |
| MaeIII | GTNAC | 3 cut(s) | 58, 259, 635 |
| MalI | GATC | 3 cut(s) | 516, 648, 858 |
| MboI | GATC | 3 cut(s) | 514, 646, 856 |
| MboII | GAAGA | 4 cut(s) | 90, 489, 492, 509 |
| MflI | RGATCY | 1 cut(s) | 514 |
| MhlI | GDGCHC | 1 cut(s) | 285 |
| MluCI | AATT | 6 cut(s) | 322, 658, 852, 891, 1006, 1014 |
| MlyI | GAGTC | 1 cut(s) | 834 |
| MmeI | TCCRAC | 1 cut(s) | 735 |
| MnlI | CCTC | 5 cut(s) | 242, 329, 532, 611, 913 |
| Mph1103I | ATGCAT | 1 cut(s) | 277 |
| MspA1I | CMGCKG | 1 cut(s) | 763 |
| MspI | CCGG | 3 cut(s) | 779, 912, 955 |
| MspR9I | CCNGG | 5 cut(s) | 387, 779, 780, 971, 989 |
| MvaI | CCWGG | 3 cut(s) | 387, 971, 989 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 187, 431, 547, 730 |
| NciI | CCSGG | 2 cut(s) | 779, 780 |
| NdeII | GATC | 3 cut(s) | 514, 646, 856 |
| NlaIII | CATG | 5 cut(s) | 48, 161, 540, 694, 718 |
| NlaIV | GGNNCC | 1 cut(s) | 182 |
| NmeAIII | GCCGAG | 2 cut(s) | 582, 759 |
| NmuCI | GTSAC | 1 cut(s) | 259 |
| NsiI | ATGCAT | 1 cut(s) | 277 |
| PagI | TCATGA | 1 cut(s) | 157 |
| PfeI | GAWTC | 1 cut(s) | 809 |
| PflFI | GACNNNGTC | 1 cut(s) | 356 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 537 |
| PkrI | GCNGC | 4 cut(s) | 94, 424, 547, 910 |
| PleI | GAGTC | 1 cut(s) | 833 |
| PpsI | GAGTC | 1 cut(s) | 833 |
| Psp1406I | AACGTT | 2 cut(s) | 379, 697 |
| Psp6I | CCWGG | 3 cut(s) | 385, 969, 987 |
| PspGI | CCWGG | 3 cut(s) | 385, 969, 987 |
| PspN4I | GGNNCC | 1 cut(s) | 182 |
| PspPI | GGNCC | 1 cut(s) | 293 |
| PstNI | CAGNNNCTG | 1 cut(s) | 868 |
| PsuI | RGATCY | 1 cut(s) | 514 |
| PsyI | GACNNNGTC | 1 cut(s) | 356 |
| RsaI | GTAC | 3 cut(s) | 656, 815, 846 |
| RsaNI | GTAC | 3 cut(s) | 655, 814, 845 |
| SatI | GCNGC | 4 cut(s) | 93, 423, 546, 909 |
| Sau3AI | GATC | 3 cut(s) | 514, 646, 856 |
| Sau96I | GGNCC | 1 cut(s) | 293 |
| SchI | GAGTC | 1 cut(s) | 834 |
| ScrFI | CCNGG | 5 cut(s) | 387, 779, 780, 971, 989 |
| SduI | GDGCHC | 1 cut(s) | 285 |
| SexAI | ACCWGGT | 1 cut(s) | 969 |
| SfaNI | GCATC | 3 cut(s) | 262, 284, 421 |
| SinI | GGWCC | 1 cut(s) | 293 |
| SmaI | CCCGGG | 1 cut(s) | 780 |
| Sse9I | AATT | 6 cut(s) | 322, 658, 852, 891, 1006, 1014 |
| SsiI | CCGC | 3 cut(s) | 423, 731, 761 |
| SspMI | CTAG | 6 cut(s) | 56, 77, 426, 498, 567, 822 |
| StyD4I | CCNGG | 5 cut(s) | 385, 777, 778, 969, 987 |
| TaaI | ACNGT | 2 cut(s) | 528, 870 |
| TaiI | ACGT | 2 cut(s) | 382, 700 |
| TaqI | TCGA | 1 cut(s) | 351 |
| TasI | AATT | 6 cut(s) | 322, 658, 852, 891, 1006, 1014 |
| TatI | WGTACW | 2 cut(s) | 654, 844 |
| TauI | GCSGC | 1 cut(s) | 425 |
| TfiI | GAWTC | 1 cut(s) | 809 |
| TscAI | CASTG | 1 cut(s) | 285 |
| TseFI | GTSAC | 1 cut(s) | 259 |
| TseI | GCWGC | 3 cut(s) | 92, 545, 908 |
| Tsp45I | GTSAC | 1 cut(s) | 259 |
| TspDTI | ATGAA | 5 cut(s) | 174, 337, 428, 690, 694 |
| TspGWI | ACGGA | 1 cut(s) | 499 |
| TspMI | CCCGGG | 1 cut(s) | 778 |
| TspRI | CASTG | 1 cut(s) | 285 |
| Tth111I | GACNNNGTC | 1 cut(s) | 356 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 537 |
| VpaK11BI | GGWCC | 1 cut(s) | 293 |
| XapI | RAATTY | 1 cut(s) | 1014 |
| XbaI | TCTAGA | 1 cut(s) | 821 |
| XmaI | CCCGGG | 1 cut(s) | 778 |
| XspI | CTAG | 6 cut(s) | 56, 77, 426, 498, 567, 822 |
| Zsp2I | ATGCAT | 1 cut(s) | 277 |