Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0009597

Physical Location & Seq

Genomic Coordinates Forward (+)

22267271 .. 22269438

Gene Structure 2168 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G208500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 654 bp

ATGTCAGTCCCCATCAAACCAGGAGATGGTAAAGCCAAAAACCCCATAATGCCCTCCAGTTTGGACCAACAGCCATCTGGGTCTTCTTCACTGAGGCCTCATTCTCTTGTCCATCAAAACAACAAGAAGAGCAAACTAGACGTTCCTTGGTTTTGGTCATTGGATGATGATGATGATGATGATGATGATGATGGTGATGATGGTGATGATGTTAATGTTCCAGAAGAGAGCGATGAAGATATGTTCACGGTTCCGGACGTGGAGGCTTTACCTCCTCCTTTCAATAACATCACTTCTAATAATACCTCTTCCACCACCAATGCCACCAGCAACACCACCAATAACAACAACCCAGAAGCTCAGTCTGGCTTTCCGGCAAAACGCCGCAGAGGCCGGAACCCAGTTGATAAGGAGTACAGACGACTCAAGAGATTGCTAAGGAACAGGGTGTCTGCTCAACAAGCTCGGGAAAGAAAGAAGGTTTACGTCAATGAACTGGAATCAAGAGCCAAAGAATTGGAGGATAGCAATTCAAAGTTGGAAGAAAAGATCTCTACACTCGTCAACGAAAACGCCATGCTTCGAAAGGTTCTTATGAATACAAGGCCGAAAGTGGACGAAAGTATTGAGCCAAAGGCAGGATCAGTTAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0001012 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009889 GO:0010224 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0080167 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

bZIP_1

Protein Analysis

218

Amino Acids

24.35

Weight (kDa)

5.16

Isoelectric Point (pI)

56.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009597)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17609 AT3G17609 AT3G17609 AT3G17609
fragaria_vesca	FvH4_4g21800 FvH4_4g21800
malus_domestica	MD16G1132200.v1.1
prunus_persica	Prupe.1G208500_v2.0.a1 Prupe.1G208500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0428031
rosa_laevigata	RLG00000007188
rosa_multiflora	Rmu_sc0005263.1_g000006
rosa_roxburghii	Rroxscaffold_5G00369720
rosa_rugosa	Rorug04G0221300.1 Rorug04G0221400 Rorug04G0221500 Rorug04G0221500
rosa_samantha	Rh4AG278700 Rh4BG284100 Rh4CG300000 Rh4DG281400
rosa_wichuraiana	Rw4G024230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	26
AccIII	TCCGGA	1 cut(s)	253
AciI	CCGC	1 cut(s)	385
AclWI	GGATC	1 cut(s)	649
AfaI	GTAC	1 cut(s)	416
AfiI	CCNNNNNNNGG	2 cut(s)	26, 638
AgsI	TTSAA	2 cut(s)	283, 534
AjiI	CACGTC	1 cut(s)	259
AjnI	CCWGG	1 cut(s)	19
AluBI	AGCT	2 cut(s)	359, 464
AluI	AGCT	2 cut(s)	359, 464
AlwI	GGATC	1 cut(s)	649
Ama87I	CYCGRG	1 cut(s)	465
Aor13HI	TCCGGA	1 cut(s)	253
AoxI	GGCC	3 cut(s)	95, 391, 605
AspS9I	GGNCC	1 cut(s)	64
AsuHPI	GGTGA	2 cut(s)	206, 215
AsuII	TTCGAA	1 cut(s)	583
AvaI	CYCGRG	1 cut(s)	465
AvaII	GGWCC	1 cut(s)	64
BbsI	GAAGAC	1 cut(s)	75
BccI	CCATC	6 cut(s)	20, 20, 82, 120, 185, 194
BciT130I	CCWGG	1 cut(s)	21
BfaI	CTAG	1 cut(s)	137
BglI	GCCNNNNNGGC	1 cut(s)	390
BglII	AGATCT	1 cut(s)	549
BisI	GCNGC	1 cut(s)	385
BlsI	GCNGC	1 cut(s)	386
Bme1390I	CCNGG	1 cut(s)	21
Bme18I	GGWCC	1 cut(s)	64
BmeT110I	CYCGRG	1 cut(s)	465
BmgBI	CACGTC	1 cut(s)	259
BmgT120I	GGNCC	1 cut(s)	64
BmiI	GGNNCC	2 cut(s)	252, 398
BmrFI	CCNGG	1 cut(s)	21
BmrI	ACTGGG	1 cut(s)	395
BmuI	ACTGGG	1 cut(s)	395
BpiI	GAAGAC	1 cut(s)	75
BpmI	CTGGAG	1 cut(s)	40
Bpu10I	CCTNAGC	1 cut(s)	437
Bpu14I	TTCGAA	1 cut(s)	583
BpuEI	CTTGAG	1 cut(s)	410
BsaJI	CCNNGG	1 cut(s)	146
BsaWI	WCCGGW	1 cut(s)	253
Bsc4I	CCNNNNNNNGG	2 cut(s)	26, 638
Bse1I	ACTGG	3 cut(s)	57, 401, 501
BseAI	TCCGGA	1 cut(s)	253
BseBI	CCWGG	1 cut(s)	21
BseDI	CCNNGG	1 cut(s)	146
BseGI	GGATG	1 cut(s)	169
BseLI	CCNNNNNNNGG	2 cut(s)	26, 638
BseMII	CTCAG	2 cut(s)	83, 374
BseNI	ACTGG	3 cut(s)	57, 401, 501
BseRI	GAGGAG	1 cut(s)	264
BshFI	GGCC	3 cut(s)	97, 393, 607
BsiHKCI	CYCGRG	1 cut(s)	465
BsiSI	CCGG	3 cut(s)	254, 374, 394
BslI	CCNNNNNNNGG	2 cut(s)	26, 638
BsnI	GGCC	3 cut(s)	97, 393, 607
BsoBI	CYCGRG	1 cut(s)	465
Bsp119I	TTCGAA	1 cut(s)	583
Bsp13I	TCCGGA	1 cut(s)	253
Bsp143I	GATC	2 cut(s)	549, 641
BspACI	CCGC	1 cut(s)	385
BspANI	GGCC	3 cut(s)	97, 393, 607
BspCNI	CTCAG	2 cut(s)	84, 373
BspEI	TCCGGA	1 cut(s)	253
BspLI	GGNNCC	2 cut(s)	252, 398
BspPI	GGATC	1 cut(s)	649
BspQI	GCTCTTC	1 cut(s)	122
BspT104I	TTCGAA	1 cut(s)	583
BsrI	ACTGG	3 cut(s)	57, 401, 501
BssECI	CCNNGG	1 cut(s)	146
BssMI	GATC	2 cut(s)	549, 641
BssT1I	CCWWGG	1 cut(s)	146
Bst2UI	CCWGG	1 cut(s)	21
Bst4CI	ACNGT	1 cut(s)	250
Bst6I	CTCTTC	3 cut(s)	122, 219, 313
BstBI	TTCGAA	1 cut(s)	583
BstDEI	CTNAG	3 cut(s)	92, 360, 437
BstF5I	GGATG	1 cut(s)	169
BstKTI	GATC	2 cut(s)	552, 644
BstMBI	GATC	2 cut(s)	549, 641
BstMWI	GCNNNNNNNGC	2 cut(s)	390, 461
BstNI	CCWGG	1 cut(s)	21
BstSCI	CCNGG	1 cut(s)	19
BstV2I	GAAGAC	1 cut(s)	75
BstX2I	RGATCY	1 cut(s)	549
BstXI	CCANNNNNNTGG	1 cut(s)	517
BstYI	RGATCY	1 cut(s)	549
BsuRI	GGCC	3 cut(s)	97, 393, 607
BtgZI	GCGATG	1 cut(s)	246
BtrI	CACGTC	1 cut(s)	259
BtsCI	GGATG	1 cut(s)	169
BtsIMutI	CAGTG	1 cut(s)	89
Cfr13I	GGNCC	1 cut(s)	64
Csp6I	GTAC	1 cut(s)	415
CviAII	CATG	1 cut(s)	577
CviQI	GTAC	1 cut(s)	415
DdeI	CTNAG	3 cut(s)	92, 360, 437
DpnI	GATC	2 cut(s)	551, 643
DpnII	GATC	2 cut(s)	549, 641
Eam1104I	CTCTTC	3 cut(s)	122, 219, 313
EarI	CTCTTC	3 cut(s)	122, 219, 313
Eco130I	CCWWGG	1 cut(s)	146
Eco147I	AGGCCT	1 cut(s)	97
Eco47I	GGWCC	1 cut(s)	64
Eco88I	CYCGRG	1 cut(s)	465
EcoRII	CCWGG	1 cut(s)	19
EcoT14I	CCWWGG	1 cut(s)	146
ErhI	CCWWGG	1 cut(s)	146
FaeI	CATG	1 cut(s)	580
FaiI	YATR	4 cut(s)	47, 242, 578, 596
FatI	CATG	1 cut(s)	576
Fnu4HI	GCNGC	1 cut(s)	385
FokI	GGATG	1 cut(s)	176
Fsp4HI	GCNGC	1 cut(s)	385
FspBI	CTAG	1 cut(s)	137
GluI	GCNGC	1 cut(s)	385
GsuI	CTGGAG	1 cut(s)	40
HaeIII	GGCC	3 cut(s)	97, 393, 607
HapII	CCGG	3 cut(s)	254, 374, 394
Hin1II	CATG	1 cut(s)	580
HincII	GTYRAC	1 cut(s)	565
HindII	GTYRAC	1 cut(s)	565
HinfI	GANTC	2 cut(s)	423, 500
HpaII	CCGG	3 cut(s)	254, 374, 394
HphI	GGTGA	2 cut(s)	206, 215
Hpy166II	GTNNAC	4 cut(s)	246, 484, 565, 616
Hpy188III	TCNNGA	5 cut(s)	221, 254, 427, 467, 504
Hpy8I	GTNNAC	4 cut(s)	246, 484, 565, 616
HpyAV	CCTTC	1 cut(s)	472
HpyCH4III	ACNGT	1 cut(s)	250
HpyCH4IV	ACGT	3 cut(s)	141, 258, 486
HpyF10VI	GCNNNNNNNGC	2 cut(s)	390, 461
HpyF3I	CTNAG	3 cut(s)	92, 360, 437
HpySE526I	ACGT	3 cut(s)	141, 258, 486
Hsp92II	CATG	1 cut(s)	580
Kpn2I	TCCGGA	1 cut(s)	253
Kzo9I	GATC	2 cut(s)	549, 641
LguI	GCTCTTC	1 cut(s)	122
MaeI	CTAG	1 cut(s)	137
MaeII	ACGT	3 cut(s)	141, 258, 486
MalI	GATC	2 cut(s)	551, 643
MboI	GATC	2 cut(s)	549, 641
MboII	GAAGA	7 cut(s)	75, 78, 139, 236, 248, 300, 554
MflI	RGATCY	1 cut(s)	549
MluCI	AATT	2 cut(s)	515, 529
MlyI	GAGTC	1 cut(s)	417
MmeI	TCCRAC	1 cut(s)	519
MnlI	CCTC	9 cut(s)	64, 87, 108, 256, 282, 285, 316, 383, 514
MroI	TCCGGA	1 cut(s)	253
MseI	TTAA	2 cut(s)	213, 648
MspI	CCGG	3 cut(s)	254, 374, 394
MspR9I	CCNGG	1 cut(s)	21
MvaI	CCWGG	1 cut(s)	21
MwoI	GCNNNNNNNGC	2 cut(s)	390, 461
NdeII	GATC	2 cut(s)	549, 641
NlaIII	CATG	1 cut(s)	580
NlaIV	GGNNCC	2 cut(s)	252, 398
NspV	TTCGAA	1 cut(s)	583
PceI	AGGCCT	1 cut(s)	97
PciSI	GCTCTTC	1 cut(s)	122
PfeI	GAWTC	1 cut(s)	500
PflMI	CCANNNNNTGG	1 cut(s)	26
PkrI	GCNGC	1 cut(s)	386
PleI	GAGTC	1 cut(s)	417
PpsI	GAGTC	1 cut(s)	417
Psp6I	CCWGG	1 cut(s)	19
PspGI	CCWGG	1 cut(s)	19
PspN4I	GGNNCC	2 cut(s)	252, 398
PspPI	GGNCC	1 cut(s)	64
PsuI	RGATCY	1 cut(s)	549
RsaI	GTAC	1 cut(s)	416
RsaNI	GTAC	1 cut(s)	415
SapI	GCTCTTC	1 cut(s)	122
SaqAI	TTAA	2 cut(s)	213, 648
SatI	GCNGC	1 cut(s)	385
Sau3AI	GATC	2 cut(s)	549, 641
Sau96I	GGNCC	1 cut(s)	64
SchI	GAGTC	1 cut(s)	417
ScrFI	CCNGG	1 cut(s)	21
SetI	ASST	9 cut(s)	144, 261, 274, 308, 361, 466, 483, 489, 591
SfuI	TTCGAA	1 cut(s)	583
SinI	GGWCC	1 cut(s)	64
SmlI	CTYRAG	1 cut(s)	425
SmoI	CTYRAG	1 cut(s)	425
Sse9I	AATT	2 cut(s)	515, 529
SseBI	AGGCCT	1 cut(s)	97
SsiI	CCGC	1 cut(s)	385
SspMI	CTAG	1 cut(s)	137
StuI	AGGCCT	1 cut(s)	97
StyD4I	CCNGG	1 cut(s)	19
StyI	CCWWGG	1 cut(s)	146
TaaI	ACNGT	1 cut(s)	250
TaiI	ACGT	3 cut(s)	144, 261, 489
TaqI	TCGA	1 cut(s)	583
TasI	AATT	2 cut(s)	515, 529
TatI	WGTACW	1 cut(s)	414
TauI	GCSGC	1 cut(s)	387
TfiI	GAWTC	1 cut(s)	500
Tru1I	TTAA	2 cut(s)	213, 648
Tru9I	TTAA	2 cut(s)	213, 648
TscAI	CASTG	1 cut(s)	96
TspDTI	ATGAA	3 cut(s)	249, 507, 611
TspRI	CASTG	1 cut(s)	96
Van91I	CCANNNNNTGG	1 cut(s)	26
VpaK11BI	GGWCC	1 cut(s)	64
XcmI	CCANNNNNNNNNTGG	1 cut(s)	74
XspI	CTAG	1 cut(s)	137

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.