Prupe.1G224300_v2.0.a1

Histidine kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0014276
Physical Location & Seq
Reverse (-)
23790270 .. 23797640
7371 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G224300.1

Sequence Viewer

Length: 3114 bp
ATGAGTTTTTTCCATGTCTTTGGGTTTGGTTTGAAGGTGGGGCATCTACTTTGGATGCTATGTTGCTGGATTATATCTGTGATTTCCATGAACTGGTACCTTACTGGTGGGATTATGGACACCAAGGCTGGTTTGCTTGGTGATGGTGGAAAGATGTGCCTCAAATGGTGGGAGAAGATCCCAATGAATATTAGTAAGATCCGTCATCATTACTACCAGTATATTGGGTCCAAGAGAGTCCGCAAAACTTGGTGGAAAAGGCTTTTGGTTTCATGGGTGGTTGGTTGGACGATTGGGAGCCTATGGATCTTCTGGTACATGAGCTCACAAGCTAATGAGAAGAGGAAAGAAACTCTTTCAAGTATGTGTGATGAGAGGGCAAGGATGTTGCAGGATCAATTTAATGTGAGCATGAACCATATTCAGGCCATGTCCATGCTGATCTCGACTTTCCACCATGCCAAGTACCCATCTGCTATTGACCAGGAAACTTTTGCGAGGTACACTGAAAGAACTGCTTTTGAGAGGCCCCTCACGAGTGGTGTGGCATATGCTGTAAGGGTGCTCCACTCGGAAAAGGAACAATTTGAGAAGCAGCAGGGCTGGACTATCAAGAGAATGGATACCCTCGAACAAAACCCAGATCATAAGAATGACTATTCCCCAGAAGCCTTGGAACCATCCCCAGTTCAGGAAGAATATGCTCCTGTCATCTTTGCACAGGATACCGTCTCACACATCATCTCTTTTGATATGCTGACGGGGAAGGAAGATCGAGAAAATGTGCTGCGCGCAAGAGAATCGGGAAAGGGGGTTCTAACTGCTCCTTTTCGGCTGCTTAAAACAAAGCGCCTTGGAGTAATATTGACGTTTGCTGTCTACAAAAGAGATCTGCCTTCAAATGCAACTCCAAATGAAAGAATTCAAGCTACTGATGGGTATCTTGGTGGAGTCTTTCATATCGAGTCACTTGTGGAGAAGTTACTTCAACAACTCGCAAGCAAGCAAACCATCCTAGTGAATGTGTATGACATTACCAATAATTCGCATCCAATCAGCATGTATGGTTCAAATGTTTCAGATGATGAAATGCAGCATATTAGCACCTTAAGTTTTGGAGATCCCTTAAGGATCCATGAGATGCGCTGCAGGTTCAAGCACAGGCCACCATGGCCGTGGTTAGCCATTACAACTTCAATTGGGATCCTCATTATTGCATTGCTTGTTGGGCATATATTTCATGCAACTGTAAATAGGATTGCCAAAGTGGAGGATGATTTCCATAAGATGATGGAGCTCAAGAAACAGGCTGAGGCAGCCGATGTTGCCAAATCTCAGTTCCTTGCAACTGTTTCCCATGAGATCAGAACGCCAATGAATGGTGTCCTAGGAATGTTACACATGCTAATGGACACAGACCTGGATGTAACCCAACAAGATTATGTTAAAACTGCCCAGGCCAGCGGAAAAGCACTAGTCGCACTTATAAATGAGGTCTTGGACCAAGCAAAGATTGAATCTGGTAAGCTGGAGCTCGAGGCAGTGCGTTTTGATCTGCGGGCAATTCTGGATGATGTTTTATCACTCTTTTCTGGGAAGTCTCAAGAAAAAGGAGTAGAGTTGGCAGTATACATCTCAGATCAGGTTCCTGAAATGCTTATTGGCGATCCCGGAAGGTTTCGGCAAATTATCACCAACCTCATGGGGAACTCAATCAAATTCACAGAGAAAGGACACATCTTTGTGACGGTTCATCTTGTCAACGAGCTGATCGGCTCAATAGATGTTGAGACTGAATCATCATCGAAGAACACTTTGAGTGGTTTCCCTGTTGCAGATAGACACCGTAGCTGGGGTGGATTCAGGTGTTTCAGTCAAGAGGGATCCGCAAGCCATTTCGCATCGTCCTCTGATCTCATTAATGTTATTGTATCTGTTGAGGACACAGGAGTAGGAATCCCTCTAGAAGCCCAATCTCGCGTTTTCACTCCTTTTATGCAGGTTGGACCATCCATCTCACGTACACATGGAGGAACAGGAATTGGGCTAAGCATAAGCAAGTGTTTGGTTGGCCTCATGAAAGGGGAAATCGGATTTGTGAGCATTCCAAAGATTGGTTCCACATTTACATTTACTGCTGTTTTCACCAAGGCCTTCTGTAATTCAGATGATTTTAAGATCCAGCAAATCAACAGCCAATCAAATGCTCCATCCTCAGAATTTCATGGCATGACAGCATTAGTTGTGGACCAAAGACCTGTTAGGGCCAAGATGTCAAGATATCATATCCAACGGCTTGGAATTCGTGTTGAAGTAGTTTCTGATTTGGATCAGGGTTTATCCAGTTTGAGCTGTGGGAATACATCTGTCGATATGGTCCTTGTTGAACAGGAAGTTTGGGATAAAGATTCGGGCACTTCAGCTCTCTTCATCAATAATTTAAGGAAAATTCGTTGCCGTCCACCGAATCTGTTCATTCTTACTAATTCTAGTAGCTCTTGCAGAATAAACTCTGCAACTTCAGTTGTCTCTAACCCAACTGTCATCATGAAGCCTCTCAGGGCAAGTATGCTTGCTGCCTCACTACAAAGAGCCATGGGAGTTGGCAACAAGGGTAATCCTCGAAATGGGGAGCTCCCAAGTTTGACTCTCCGCAAACTTCTACTTGGGAGAAAAATTCTTATTATAGATGATAATAATGTCAATCTAAGAGTAGCTGCTGGTGCTTTGAAAAAGTATGGGGCTGAAGTGGTCTGTGCAGACAGTGGTAGAAAGGCAATCTCACTGCTTACACCGCCCCACCATTTTGATGCCTGCTTCATGGATATCCAAATGCCAGAGATGGATGGGTTTGAAGCTACAAGACGAATACGCGATATGGAACGCAATATCAGCAACAGTATTCAAAATGGCAAAGTTTCTGCCGAGGATTATGGAAATATTTTAACATGGCATGTCCCAATTCTGGCCATGACTGCGGATGTAATTCAGGCCACCCATGAAGAATGCACAAAGTGTGGAATGGATGGATATGTTTCCAAACCATTTGAAGCTGAACAGCTCTATCGTGAAGTTTCACGTTTTTTCCAATCAACTTCAAAGGGGAATTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004673 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009266 GO:0009267 GO:0009409 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009737 GO:0009743 GO:0009744 GO:0009755 GO:0009884 GO:0009888 GO:0009894 GO:0009909 GO:0009987 GO:0009991 GO:0010029 GO:0010033 GO:0010035 GO:0010087 GO:0010150 GO:0010271 GO:0010959 GO:0012505 GO:0016020 GO:0016036 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016775 GO:0018106 GO:0018193 GO:0018202 GO:0019222 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0031323 GO:0031329 GO:0031667 GO:0031668 GO:0031669 GO:0031984 GO:0032501 GO:0032502 GO:0032870 GO:0032879 GO:0033554 GO:0033993 GO:0034285 GO:0034756 GO:0034757 GO:0036211 GO:0038023 GO:0040007 GO:0042175 GO:0042221 GO:0042594 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043271 GO:0043412 GO:0043424 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0048366 GO:0048367 GO:0048509 GO:0048519 GO:0048580 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051049 GO:0051051 GO:0051171 GO:0051193 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0070417 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071322 GO:0071324 GO:0071329 GO:0071368 GO:0071396 GO:0071495 GO:0071496 GO:0071704 GO:0071944 GO:0080117 GO:0080190 GO:0090056 GO:0090693 GO:0097305 GO:0097306 GO:0098542 GO:0098827 GO:0099402 GO:0140096 GO:1900140 GO:1901401 GO:1901404 GO:1901564 GO:1901700 GO:1901701 GO:2000026 GO:2000241
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
CHASE HATPase_c HisKA Response_reg

Protein Analysis

1038

Amino Acids

116.08

Weight (kDa)

8.2

Isoelectric Point (pI)

40.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014276)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G27320
fragaria_vesca FvH4_4g23590 FvH4_4g23590 FvH4_4g23590 FvH4_4g23590
malus_domestica MD13G1120900.v1.1 MD16G1068400.v1.1 MD16G1120900.v1.1
prunus_persica Prupe.1G224300_v2.0.a1
pyrus_communis pycom13g10520
rosa_chinensis RchiOBHm_Chr4g0430011
rosa_laevigata RLG00000007014
rosa_roxburghii Rroxscaffold_5G00371820
rosa_rugosa Rorug04G0239800
rosa_samantha Rh4BG302900 Rh4CG318400
rosa_wichuraiana Rw4G025680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1487
Acc36I ACCTGC 2 cut(s) 1140, 1990
Acc65I GGTACC 1 cut(s) 96
AccB1I GGYRCC 1 cut(s) 96
AccB7I CCANNNNNTGG 3 cut(s) 93, 1379, 2114
AccI GTMKAC 2 cut(s) 879, 1629
AccII CGCG 3 cut(s) 792, 1980, 2874
AciI CCGC 7 cut(s) 241, 1464, 1558, 1887, 2653, 2795, 2978
AcoI YGGCCR 2 cut(s) 1172, 2967
AcsI RAATTY 7 cut(s) 921, 1718, 2219, 2301, 2448, 2676, 3106
AcuI CTGAAG 3 cut(s) 2403, 2505, 2766
AdeI CACNNNGTG 1 cut(s) 3015
AfaI GTAC 5 cut(s) 98, 317, 467, 503, 2023
AfiI CCNNNNNNNGG 8 cut(s) 93, 424, 691, 1379, 1852, 2114, 2627, 2965
AflII CTTAAG 2 cut(s) 1108, 1126
AhlI ACTAGT 1 cut(s) 1474
AjnI CCWGG 3 cut(s) 483, 1419, 1455
AjuI GAANNNNNNNTTGG 8 cut(s) 248, 280, 1322, 1354, 1644, 1676, 2101, 2133
AloI GAACNNNNNNTCC 2 cut(s) 798, 830
Alw21I GWGCWC 5 cut(s) 326, 567, 1299, 1536, 2637
Alw26I GTCTC 4 cut(s) 736, 1605, 1784, 2533
Ama87I CYCGRG 1 cut(s) 1535
ApeKI GCWGC 8 cut(s) 595, 787, 835, 1093, 1146, 1316, 2576, 2717
ApoI RAATTY 7 cut(s) 921, 1718, 2219, 2301, 2448, 2676, 3106
AseI ATTAAT 1 cut(s) 1920
Asp700I GAANNNNTTC 2 cut(s) 921, 2471
Asp718I GGTACC 1 cut(s) 96
AspA2I CCTAGG 1 cut(s) 1387
AspLEI GCGC 4 cut(s) 792, 794, 852, 1146
AspS9I GGNCC 7 cut(s) 228, 528, 1501, 2006, 2248, 2265, 2377
AsuC2I CCSGG 1 cut(s) 1671
AsuHPI GGTGA 3 cut(s) 152, 1684, 2137
AvaI CYCGRG 1 cut(s) 1535
AvaII GGWCC 5 cut(s) 228, 1501, 2006, 2248, 2377
AvrII CCTAGG 1 cut(s) 1387
BaeGI GKGCMC 1 cut(s) 2417
BalI TGGCCA 1 cut(s) 2969
BamHI GGATCC 3 cut(s) 1131, 1203, 1883
BanI GGYRCC 1 cut(s) 96
BanII GRGCYC 4 cut(s) 326, 1299, 1536, 2637
BauI CACGAG 1 cut(s) 535
Bbv12I GWGCWC 5 cut(s) 326, 567, 1299, 1536, 2637
BbvCI CCTCAGC 1 cut(s) 1311
BbvI GCAGC 8 cut(s) 607, 774, 822, 1105, 1133, 1328, 2563, 2704
BceAI ACGGC 3 cut(s) 1159, 2309, 2442
BcgI CGANNNNNNTGC 2 cut(s) 783, 817
BciT130I CCWGG 3 cut(s) 485, 1421, 1457
BciVI GTATCC 2 cut(s) 616, 718
BcnI CCSGG 1 cut(s) 1671
BcoDI GTCTC 4 cut(s) 736, 1605, 1784, 2533
BcuI ACTAGT 1 cut(s) 1474
BfaI CTAG 5 cut(s) 1016, 1388, 1475, 1964, 2490
BfmI CTRYAG 1 cut(s) 1147
BfoI RGCGCY 1 cut(s) 853
BfrI CTTAAG 2 cut(s) 1108, 1126
BfuAI ACCTGC 2 cut(s) 1140, 1990
BfuI GTATCC 2 cut(s) 616, 718
BglI GCCNNNNNGGC 1 cut(s) 1171
BglII AGATCT 1 cut(s) 889
BisI GCNGC 8 cut(s) 596, 788, 836, 1094, 1147, 1317, 2577, 2718
BlnI CCTAGG 1 cut(s) 1387
BlpI GCTNAGC 1 cut(s) 2048
BlsI GCNGC 8 cut(s) 597, 789, 837, 1095, 1148, 1318, 2578, 2719
Bme1390I CCNGG 4 cut(s) 485, 1421, 1457, 1671
Bme18I GGWCC 5 cut(s) 228, 1501, 2006, 2248, 2377
BmeT110I CYCGRG 1 cut(s) 1535
BmgT120I GGNCC 7 cut(s) 228, 528, 1501, 2006, 2248, 2265, 2377
BmrFI CCNGG 4 cut(s) 485, 1421, 1457, 1671
BmrI ACTGGG 1 cut(s) 680
BmsI GCATC 6 cut(s) 45, 52, 1057, 1131, 1910, 2800
BmuI ACTGGG 1 cut(s) 680
BpmI CTGGAG 1 cut(s) 1550
Bpu10I CCTNAGC 1 cut(s) 1311
Bpu1102I GCTNAGC 1 cut(s) 2048
BpuEI CTTGAG 2 cut(s) 1283, 1587
BpuMI CCSGG 1 cut(s) 1671
BsaAI YACGTR 1 cut(s) 2021
BsaBI GATNNNNATC 2 cut(s) 939, 2328
Bsc4I CCNNNNNNNGG 8 cut(s) 93, 424, 691, 1379, 1852, 2114, 2627, 2965
Bse1I ACTGG 5 cut(s) 98, 109, 217, 686, 2343
Bse3DI GCAATG 1 cut(s) 1217
Bse8I GATNNNNATC 2 cut(s) 939, 2328
BseBI CCWGG 3 cut(s) 485, 1421, 1457
BseJI GATNNNNATC 2 cut(s) 939, 2328
BseLI CCNNNNNNNGG 8 cut(s) 93, 424, 691, 1379, 1852, 2114, 2627, 2965
BseMI GCAATG 1 cut(s) 1217
BseMII CTCAG 5 cut(s) 1302, 1349, 1650, 2229, 2572
BseNI ACTGG 5 cut(s) 98, 109, 217, 686, 2343
BsePI GCGCGC 1 cut(s) 790
BseSI GKGCMC 1 cut(s) 2417
BseXI GCAGC 8 cut(s) 607, 774, 822, 1105, 1133, 1328, 2563, 2704
BseYI CCCAGC 1 cut(s) 1851
BsgI GTGCAG 1 cut(s) 2778
Bsh1236I CGCG 3 cut(s) 792, 1980, 2874
BshNI GGYRCC 1 cut(s) 96
BsiHKAI GWGCWC 5 cut(s) 326, 567, 1299, 1536, 2637
BsiHKCI CYCGRG 1 cut(s) 1535
BsiSI CCGG 1 cut(s) 1671
BslFI GGGAC 1 cut(s) 2942
BslI CCNNNNNNNGG 8 cut(s) 93, 424, 691, 1379, 1852, 2114, 2627, 2965
BsmAI GTCTC 4 cut(s) 736, 1605, 1784, 2533
BsmBI CGTCTC 1 cut(s) 736
BsmFI GGGAC 1 cut(s) 2942
BsmI GAATGC 2 cut(s) 2103, 3011
BsoBI CYCGRG 1 cut(s) 1535
Bsp1286I GDGCHC 6 cut(s) 326, 567, 1299, 1536, 2417, 2637
Bsp1720I GCTNAGC 1 cut(s) 2048
Bsp19I CCATGG 2 cut(s) 1169, 2595
BspACI CCGC 7 cut(s) 241, 1464, 1558, 1887, 2653, 2795, 2978
BspCNI CTCAG 5 cut(s) 1303, 1348, 1649, 2228, 2571
BspFNI CGCG 3 cut(s) 792, 1980, 2874
BspHI TCATGA 2 cut(s) 2076, 2547
BspMAI CTGCAG 1 cut(s) 1151
BspMI ACCTGC 2 cut(s) 1140, 1990
BspT107I GGYRCC 1 cut(s) 96
BspTI CTTAAG 2 cut(s) 1108, 1126
BsrDI GCAATG 1 cut(s) 1217
BsrI ACTGG 5 cut(s) 98, 109, 217, 686, 2343
BssHII GCGCGC 1 cut(s) 790
BssNAI GTATAC 1 cut(s) 1630
BssSI CACGAG 1 cut(s) 535
BssT1I CCWWGG 7 cut(s) 123, 672, 853, 1169, 1387, 2148, 2595
Bst1107I GTATAC 1 cut(s) 1630
Bst2BI CACGAG 1 cut(s) 535
Bst2UI CCWGG 3 cut(s) 485, 1421, 1457
Bst4CI ACNGT 8 cut(s) 730, 1249, 1351, 1750, 1847, 2542, 2765, 2900
Bst6I CTCTTC 2 cut(s) 335, 2432
BstAFI CTTAAG 2 cut(s) 1108, 1126
BstBAI YACGTR 1 cut(s) 2021
BstC8I GCNNGC 8 cut(s) 792, 1000, 1004, 1462, 1560, 1891, 2574, 2815
BstDEI CTNAG 7 cut(s) 1311, 1335, 1636, 2048, 2215, 2558, 2708
BstDSI CCRYGG 3 cut(s) 1169, 1175, 2595
BstFNI CGCG 3 cut(s) 792, 1980, 2874
BstH2I RGCGCY 1 cut(s) 853
BstHHI GCGC 4 cut(s) 792, 794, 852, 1146
BstMAI GTCTC 4 cut(s) 736, 1605, 1784, 2533
BstMWI GCNNNNNNNGC 9 cut(s) 1171, 1228, 1316, 1325, 1478, 2723, 2794, 2892, 2975
BstNI CCWGG 3 cut(s) 485, 1421, 1457
BstNSI RCATGY 3 cut(s) 1063, 1405, 2957
BstSCI CCNGG 4 cut(s) 483, 1419, 1455, 1669
BstSFI CTRYAG 1 cut(s) 1147
BstSLI GKGCMC 1 cut(s) 2417
BstUI CGCG 3 cut(s) 792, 1980, 2874
BstV1I GCAGC 8 cut(s) 607, 774, 822, 1105, 1133, 1328, 2563, 2704
BstX2I RGATCY 9 cut(s) 177, 198, 306, 889, 1120, 1131, 1203, 1883, 2178
BstXI CCANNNNNNTGG 5 cut(s) 20, 224, 1176, 1702, 2297
BstYI RGATCY 9 cut(s) 177, 198, 306, 889, 1120, 1131, 1203, 1883, 2178
BstZ17I GTATAC 1 cut(s) 1630
BsuI GTATCC 2 cut(s) 616, 718
BtgI CCRYGG 3 cut(s) 1169, 1175, 2595
BtsI GCAGTG 2 cut(s) 1548, 2783
BtsIMutI CAGTG 4 cut(s) 504, 1548, 2770, 2783
BveI ACCTGC 2 cut(s) 1140, 1990
Cac8I GCNNGC 8 cut(s) 792, 1000, 1004, 1462, 1560, 1891, 2574, 2815
CciI TCATGA 2 cut(s) 2076, 2547
CfoI GCGC 4 cut(s) 792, 794, 852, 1146
Cfr13I GGNCC 7 cut(s) 228, 528, 1501, 2006, 2248, 2265, 2377
Csp6I GTAC 5 cut(s) 97, 316, 466, 502, 2022
CviQI GTAC 5 cut(s) 97, 316, 466, 502, 2022
DdeI CTNAG 7 cut(s) 1311, 1335, 1636, 2048, 2215, 2558, 2708
DraIII CACNNNGTG 1 cut(s) 3015
EaeI YGGCCR 2 cut(s) 1172, 2967
Eam1104I CTCTTC 2 cut(s) 335, 2432
EarI CTCTTC 2 cut(s) 335, 2432
Ecl136II GAGCTC 4 cut(s) 324, 1297, 1534, 2635
Eco130I CCWWGG 7 cut(s) 123, 672, 853, 1169, 1387, 2148, 2595
Eco147I AGGCCT 1 cut(s) 2153
Eco24I GRGCYC 4 cut(s) 326, 1299, 1536, 2637
Eco32I GATATC 2 cut(s) 2282, 2827
Eco47I GGWCC 5 cut(s) 228, 1501, 2006, 2248, 2377
Eco53kI GAGCTC 4 cut(s) 324, 1297, 1534, 2635
Eco57I CTGAAG 3 cut(s) 2403, 2505, 2766
Eco88I CYCGRG 1 cut(s) 1535
EcoICRI GAGCTC 4 cut(s) 324, 1297, 1534, 2635
EcoO109I RGGNCCY 1 cut(s) 528
EcoRI GAATTC 2 cut(s) 921, 2301
EcoRII CCWGG 3 cut(s) 483, 1419, 1455
EcoRV GATATC 2 cut(s) 2282, 2827
EcoT14I CCWWGG 7 cut(s) 123, 672, 853, 1169, 1387, 2148, 2595
EcoT38I GRGCYC 4 cut(s) 326, 1299, 1536, 2637
ErhI CCWWGG 7 cut(s) 123, 672, 853, 1169, 1387, 2148, 2595
Esp3I CGTCTC 1 cut(s) 736
FalI AAGNNNNNCTT 4 cut(s) 339, 371, 502, 534
FaqI GGGAC 1 cut(s) 2942
FauI CCCGC 1 cut(s) 1551
FauNDI CATATG 1 cut(s) 550
FblI GTMKAC 2 cut(s) 879, 1629
Fnu4HI GCNGC 8 cut(s) 596, 788, 836, 1094, 1147, 1317, 2577, 2718
FriOI GRGCYC 4 cut(s) 326, 1299, 1536, 2637
Fsp4HI GCNGC 8 cut(s) 596, 788, 836, 1094, 1147, 1317, 2577, 2718
FspBI CTAG 5 cut(s) 1016, 1388, 1475, 1964, 2490
GlaI GCGC 4 cut(s) 791, 793, 851, 1145
GluI GCNGC 8 cut(s) 596, 788, 836, 1094, 1147, 1317, 2577, 2718
GsaI CCCAGC 1 cut(s) 1855
GsuI CTGGAG 1 cut(s) 1550
HaeII RGCGCY 1 cut(s) 853
HapII CCGG 1 cut(s) 1671
HhaI GCGC 4 cut(s) 792, 794, 852, 1146
Hin6I GCGC 4 cut(s) 790, 792, 850, 1144
HinP1I GCGC 4 cut(s) 790, 792, 850, 1144
HincII GTYRAC 1 cut(s) 1762
HindII GTYRAC 1 cut(s) 1762
HpaII CCGG 1 cut(s) 1671
HphI GGTGA 3 cut(s) 152, 1684, 2137
Hpy166II GTNNAC 7 cut(s) 504, 880, 1630, 1762, 2024, 2248, 2462
Hpy188I TCNGA 9 cut(s) 574, 1081, 1367, 1639, 1912, 2093, 2167, 2218, 2323
Hpy8I GTNNAC 7 cut(s) 504, 880, 1630, 1762, 2024, 2248, 2462
HpyAV CCTTC 5 cut(s) 28, 760, 906, 1668, 2164
HpyCH4III ACNGT 8 cut(s) 730, 1249, 1351, 1750, 1847, 2542, 2765, 2900
HpyCH4IV ACGT 3 cut(s) 869, 2020, 3079
HpyF10VI GCNNNNNNNGC 9 cut(s) 1171, 1228, 1316, 1325, 1478, 2723, 2794, 2892, 2975
HpyF3I CTNAG 7 cut(s) 1311, 1335, 1636, 2048, 2215, 2558, 2708
HpySE526I ACGT 3 cut(s) 869, 2020, 3079
HspAI GCGC 4 cut(s) 790, 792, 850, 1144
KpnI GGTACC 1 cut(s) 100
LmnI GCTCC 9 cut(s) 297, 570, 709, 829, 1294, 1531, 2212, 2632, 2640
Lsp1109I GCAGC 8 cut(s) 607, 774, 822, 1105, 1133, 1328, 2563, 2704
LweI GCATC 6 cut(s) 45, 52, 1057, 1131, 1910, 2800
MaeI CTAG 5 cut(s) 1016, 1388, 1475, 1964, 2490
MaeII ACGT 3 cut(s) 869, 2020, 3079
MaeIII GTNAC 5 cut(s) 966, 981, 1395, 1426, 1744
MboII GAAGA 8 cut(s) 187, 301, 352, 707, 782, 1819, 2419, 3014
MfeI CAATTG 1 cut(s) 1197
MflI RGATCY 9 cut(s) 177, 198, 306, 889, 1120, 1131, 1203, 1883, 2178
MhlI GDGCHC 6 cut(s) 326, 567, 1299, 1536, 2417, 2637
MlsI TGGCCA 1 cut(s) 2969
MluNI TGGCCA 1 cut(s) 2969
MlyI GAGTC 4 cut(s) 246, 960, 974, 2641
MmeI TCCRAC 3 cut(s) 266, 1984, 2314
Mox20I TGGCCA 1 cut(s) 2969
MroXI GAANNNNTTC 2 cut(s) 921, 2471
MscI TGGCCA 1 cut(s) 2969
MseI TTAA 9 cut(s) 402, 840, 1109, 1127, 1446, 1920, 2175, 2441, 2945
MslI CAYNNNNRTG 7 cut(s) 434, 651, 1016, 1174, 1406, 1742, 2808
Msp20I TGGCCA 1 cut(s) 2969
MspA1I CMGCKG 1 cut(s) 1464
MspCI CTTAAG 2 cut(s) 1108, 1126
MspI CCGG 1 cut(s) 1671
MspR9I CCNGG 4 cut(s) 485, 1421, 1457, 1671
MunI CAATTG 1 cut(s) 1197
Mva1269I GAATGC 2 cut(s) 2103, 3011
MvaI CCWGG 3 cut(s) 485, 1421, 1457
MvnI CGCG 3 cut(s) 792, 1980, 2874
MwoI GCNNNNNNNGC 9 cut(s) 1171, 1228, 1316, 1325, 1478, 2723, 2794, 2892, 2975
NciI CCSGG 1 cut(s) 1671
NcoI CCATGG 2 cut(s) 1169, 2595
NdeI CATATG 1 cut(s) 550
NmeAIII GCCGAG 1 cut(s) 2950
NmuCI GTSAC 2 cut(s) 966, 1744
NspI RCATGY 3 cut(s) 1063, 1405, 2957
PaeR7I CTCGAG 1 cut(s) 1535
PagI TCATGA 2 cut(s) 2076, 2547
PauI GCGCGC 1 cut(s) 790
PceI AGGCCT 1 cut(s) 2153
PctI GAATGC 2 cut(s) 2103, 3011
PdmI GAANNNNTTC 2 cut(s) 921, 2471
PfeI GAWTC 7 cut(s) 800, 1517, 1796, 1860, 1956, 2408, 2467
PflMI CCANNNNNTGG 3 cut(s) 93, 1379, 2114
PfoI TCCNGGA 1 cut(s) 1669
PkrI GCNGC 8 cut(s) 597, 789, 837, 1095, 1148, 1318, 2578, 2719
PleI GAGTC 4 cut(s) 245, 959, 973, 2641
PpsI GAGTC 4 cut(s) 245, 959, 973, 2641
Ppu21I YACGTR 1 cut(s) 2021
PshBI ATTAAT 1 cut(s) 1920
PsiI TTATAA 1 cut(s) 1487
Psp124BI GAGCTC 4 cut(s) 326, 1299, 1536, 2637
Psp6I CCWGG 3 cut(s) 483, 1419, 1455
PspFI CCCAGC 1 cut(s) 1851
PspGI CCWGG 3 cut(s) 483, 1419, 1455
PspPI GGNCC 7 cut(s) 228, 528, 1501, 2006, 2248, 2265, 2377
PspXI VCTCGAGB 1 cut(s) 1535
PstI CTGCAG 1 cut(s) 1151
PsuI RGATCY 9 cut(s) 177, 198, 306, 889, 1120, 1131, 1203, 1883, 2178
PteI GCGCGC 1 cut(s) 790
RsaI GTAC 5 cut(s) 98, 317, 467, 503, 2023
RsaNI GTAC 5 cut(s) 97, 316, 466, 502, 2022
RseI CAYNNNNRTG 7 cut(s) 434, 651, 1016, 1174, 1406, 1742, 2808
SacI GAGCTC 4 cut(s) 326, 1299, 1536, 2637
SaqAI TTAA 9 cut(s) 402, 840, 1109, 1127, 1446, 1920, 2175, 2441, 2945
SatI GCNGC 8 cut(s) 596, 788, 836, 1094, 1147, 1317, 2577, 2718
Sau96I GGNCC 7 cut(s) 228, 528, 1501, 2006, 2248, 2265, 2377
SchI GAGTC 4 cut(s) 246, 960, 974, 2641
ScrFI CCNGG 4 cut(s) 485, 1421, 1457, 1671
SduI GDGCHC 6 cut(s) 326, 567, 1299, 1536, 2417, 2637
SfaNI GCATC 6 cut(s) 45, 52, 1057, 1131, 1910, 2800
SfcI CTRYAG 1 cut(s) 1147
SfiI GGCCNNNNNGGCC 1 cut(s) 1171
Sfr274I CTCGAG 1 cut(s) 1535
SinI GGWCC 5 cut(s) 228, 1501, 2006, 2248, 2377
SlaI CTCGAG 1 cut(s) 1535
SmiMI CAYNNNNRTG 7 cut(s) 434, 651, 1016, 1174, 1406, 1742, 2808
SmlI CTYRAG 5 cut(s) 1108, 1126, 1298, 1535, 1602
SmoI CTYRAG 5 cut(s) 1108, 1126, 1298, 1535, 1602
SpeI ACTAGT 1 cut(s) 1474
SseBI AGGCCT 1 cut(s) 2153
SsiI CCGC 7 cut(s) 241, 1464, 1558, 1887, 2653, 2795, 2978
SspI AATATT 3 cut(s) 190, 864, 2941
SspMI CTAG 5 cut(s) 1016, 1388, 1475, 1964, 2490
SstI GAGCTC 4 cut(s) 326, 1299, 1536, 2637
StuI AGGCCT 1 cut(s) 2153
StyD4I CCNGG 4 cut(s) 483, 1419, 1455, 1669
StyI CCWWGG 7 cut(s) 123, 672, 853, 1169, 1387, 2148, 2595
TaaI ACNGT 8 cut(s) 730, 1249, 1351, 1750, 1847, 2542, 2765, 2900
TaiI ACGT 3 cut(s) 872, 2023, 3082
TaqI TCGA 8 cut(s) 446, 630, 775, 963, 1536, 1805, 2370, 2623
TfiI GAWTC 7 cut(s) 800, 1517, 1796, 1860, 1956, 2408, 2467
Tru1I TTAA 9 cut(s) 402, 840, 1109, 1127, 1446, 1920, 2175, 2441, 2945
Tru9I TTAA 9 cut(s) 402, 840, 1109, 1127, 1446, 1920, 2175, 2441, 2945
TscAI CASTG 4 cut(s) 511, 1548, 2770, 2790
TseFI GTSAC 2 cut(s) 966, 1744
TseI GCWGC 8 cut(s) 595, 787, 835, 1093, 1146, 1316, 2576, 2717
Tsp45I GTSAC 2 cut(s) 966, 1744
TspGWI ACGGA 1 cut(s) 191
TspRI CASTG 4 cut(s) 511, 1548, 2770, 2790
Van91I CCANNNNNTGG 3 cut(s) 93, 1379, 2114
Vha464I CTTAAG 2 cut(s) 1108, 1126
VpaK11BI GGWCC 5 cut(s) 228, 1501, 2006, 2248, 2377
VspI ATTAAT 1 cut(s) 1920
XapI RAATTY 7 cut(s) 921, 1718, 2219, 2301, 2448, 2676, 3106
XbaI TCTAGA 1 cut(s) 1963
XceI RCATGY 3 cut(s) 1063, 1405, 2957
XcmI CCANNNNNNNNNTGG 1 cut(s) 1173
XhoI CTCGAG 1 cut(s) 1535
XmaJI CCTAGG 1 cut(s) 1387
XmiI GTMKAC 2 cut(s) 879, 1629
XmnI GAANNNNTTC 2 cut(s) 921, 2471
XspI CTAG 5 cut(s) 1016, 1388, 1475, 1964, 2490
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.