Prupe.1G239500_v2.0.a1

Methyltransferase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0014962
Physical Location & Seq
Reverse (-)
25381167 .. 25382378
1212 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G239500.1

Sequence Viewer

Length: 795 bp
ATGAAAACCAGCACTCAACCAAAACTTCTCACTTTCAAATACGTGTTTCTCTCTCTCCTTCTCACTCTCCCCATTCTCCTTCTTGTACTCCGTCTTCAACCTCAAAACCTCCGCTGGACCGCCGCCTCACCCGGTAACATCCGCCCGCCAACCGTACCCAACATAACCACCCGAGGCATCCGAATCCGACCCGGCTACACCTCGTACGAAGCCTACATCCAGCGCCAGGTCAACAAGACCCTCAACCCTAGGCTGCGACAAGTTTGGATCACCCGCGACTGGGACCGGAAGATCCAAGTCTTCTCCCAATTCTTCCAGAACCTAAAGCGCCGGAGCCTCCTCTCCAACGACTCCAAATCCCTCTGCATCGGCGCACGAGTCGGCCAGGAGGTCGAGGCGCTGCGCCGAGTCGGCGTGTCCGACTCAGTCGGCATCGACCTCGTGCCCTACCCGCCGCTGGTCGTGAAAGGGGACTTCCACAACCAGCCCTTCGGCAACGACACCTTCGACTTCGAGTTCTCCAACGTGTTCGACCACGCGCTGTTGCCGGACAAGTTCGTTGCGGAGATCGAGCGGACGTTGAAGCCACGTGGCGTCTGCGTTCTACACGTGGCGGTTGCGAGGCGGACGGATAAGTACTCGGCGAATGACCTGTTTAGTATCAAGCCGTTGGTGGAGATGTTTCGGAGGTCTGAGTTGGTTCAGGTTAGGGAGATTGACGGGTTTGGGGCTAACACGGAGGCGGTTTTTATGAAACGGGAAACGGGATACGGGGAACACATCCAACGGTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_11

Protein Analysis

265

Amino Acids

30.33

Weight (kDa)

9.99

Isoelectric Point (pI)

47.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014962)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G24480 AT4G24805
fragaria_vesca FvH4_4g25070
malus_domestica MD13G1106800.v1.1 MD16G1106900.v1.1
prunus_persica Prupe.1G239500_v2.0.a1
pyrus_communis pycom13g09260
rosa_chinensis RchiOBHm_Chr4g0432251
rosa_laevigata RLG00000006859
rosa_multiflora Rmu_co8384597.1_g000001
rosa_roxburghii Rroxscaffold_5G00373700
rosa_rugosa Rorug04G0255600
rosa_samantha Rh4BG320200 Rh4CG335400 Rh4DG315600
rosa_wichuraiana Rw4G027180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 574
AccII CGCG 2 cut(s) 276, 539
AclWI GGATC 2 cut(s) 275, 286
AcoI YGGCCR 1 cut(s) 382
AcvI CACGTG 2 cut(s) 590, 610
AcyI GRCGYC 1 cut(s) 594
AfaI GTAC 4 cut(s) 87, 156, 206, 638
AfiI CCNNNNNNNGG 4 cut(s) 226, 279, 280, 457
AflIII ACRYGT 3 cut(s) 42, 525, 607
AgsI TTSAA 3 cut(s) 37, 98, 583
AjnI CCWGG 2 cut(s) 225, 384
AlwI GGATC 2 cut(s) 275, 286
Ama87I CYCGRG 1 cut(s) 171
AoxI GGCC 1 cut(s) 382
ApeKI GCWGC 2 cut(s) 253, 400
AspA2I CCTAGG 1 cut(s) 248
AspLEI GCGC 6 cut(s) 225, 330, 374, 400, 405, 541
AspS9I GGNCC 2 cut(s) 117, 283
AsuC2I CCSGG 2 cut(s) 132, 192
AsuHPI GGTGA 2 cut(s) 120, 262
AvaI CYCGRG 1 cut(s) 171
AvaII GGWCC 2 cut(s) 117, 283
AvrII CCTAGG 1 cut(s) 248
BaeGI GKGCMC 1 cut(s) 447
BarI GAAGNNNNNNTAC 2 cut(s) 78, 110
BauI CACGAG 2 cut(s) 375, 440
BbrPI CACGTG 2 cut(s) 590, 610
BbsI GAAGAC 2 cut(s) 86, 292
BbvI GCAGC 2 cut(s) 240, 387
BceAI ACGGC 1 cut(s) 652
BcgI CGANNNNNNTGC 2 cut(s) 421, 455
BciT130I CCWGG 2 cut(s) 227, 386
BciVI GTATCC 1 cut(s) 761
BcnI CCSGG 2 cut(s) 132, 192
BfaI CTAG 1 cut(s) 249
BfoI RGCGCY 3 cut(s) 226, 331, 401
BfuI GTATCC 1 cut(s) 761
BglI GCCNNNNNGGC 1 cut(s) 411
BisI GCNGC 4 cut(s) 123, 254, 401, 455
BlnI CCTAGG 1 cut(s) 248
BlsI GCNGC 4 cut(s) 124, 255, 402, 456
BmcAI AGTACT 1 cut(s) 638
Bme1390I CCNGG 4 cut(s) 132, 192, 227, 386
Bme18I GGWCC 2 cut(s) 117, 283
BmeT110I CYCGRG 1 cut(s) 171
BmgT120I GGNCC 2 cut(s) 117, 283
BmiI GGNNCC 2 cut(s) 284, 335
BmrFI CCNGG 4 cut(s) 132, 192, 227, 386
BmrI ACTGGG 1 cut(s) 289
BmsI GCATC 3 cut(s) 186, 375, 441
BmuI ACTGGG 1 cut(s) 289
BpiI GAAGAC 2 cut(s) 86, 292
BpuMI CCSGG 2 cut(s) 132, 192
BsaAI YACGTR 3 cut(s) 43, 590, 610
BsaHI GRCGYC 1 cut(s) 594
BsaJI CCNNGG 2 cut(s) 172, 248
BsaWI WCCGGW 1 cut(s) 285
Bsc4I CCNNNNNNNGG 4 cut(s) 226, 279, 280, 457
Bse1I ACTGG 1 cut(s) 284
BseBI CCWGG 2 cut(s) 227, 386
BseDI CCNNGG 2 cut(s) 172, 248
BseGI GGATG 4 cut(s) 138, 177, 216, 780
BseLI CCNNNNNNNGG 4 cut(s) 226, 279, 280, 457
BseMII CTCAG 2 cut(s) 438, 684
BseNI ACTGG 1 cut(s) 284
BseRI GAGGAG 1 cut(s) 329
BseSI GKGCMC 1 cut(s) 447
BseXI GCAGC 2 cut(s) 240, 387
Bsh1236I CGCG 2 cut(s) 276, 539
BshFI GGCC 1 cut(s) 384
BsiHKCI CYCGRG 1 cut(s) 171
BsiSI CCGG 5 cut(s) 132, 192, 286, 331, 548
BsiWI CGTACG 1 cut(s) 204
BslFI GGGAC 2 cut(s) 296, 485
BslI CCNNNNNNNGG 4 cut(s) 226, 279, 280, 457
BsmFI GGGAC 2 cut(s) 296, 485
BsnI GGCC 1 cut(s) 384
BsoBI CYCGRG 1 cut(s) 171
Bsp1286I GDGCHC 1 cut(s) 447
Bsp143I GATC 3 cut(s) 267, 291, 567
BspANI GGCC 1 cut(s) 384
BspCNI CTCAG 2 cut(s) 437, 685
BspFNI CGCG 2 cut(s) 276, 539
BspLI GGNNCC 2 cut(s) 284, 335
BspPI GGATC 2 cut(s) 275, 286
BsrBI CCGCTC 1 cut(s) 574
BsrI ACTGG 1 cut(s) 284
BssECI CCNNGG 2 cut(s) 172, 248
BssMI GATC 3 cut(s) 267, 291, 567
BssNI GRCGYC 1 cut(s) 594
BssSI CACGAG 2 cut(s) 375, 440
BssT1I CCWWGG 1 cut(s) 248
Bst2BI CACGAG 2 cut(s) 375, 440
Bst2UI CCWGG 2 cut(s) 227, 386
Bst4CI ACNGT 2 cut(s) 154, 789
BstACI GRCGYC 1 cut(s) 594
BstBAI YACGTR 3 cut(s) 43, 590, 610
BstC8I GCNNGC 1 cut(s) 146
BstDEI CTNAG 2 cut(s) 424, 693
BstF5I GGATG 4 cut(s) 138, 177, 216, 780
BstFNI CGCG 2 cut(s) 276, 539
BstH2I RGCGCY 3 cut(s) 226, 331, 401
BstHHI GCGC 6 cut(s) 225, 330, 374, 400, 405, 541
BstKTI GATC 3 cut(s) 270, 294, 570
BstMBI GATC 3 cut(s) 267, 291, 567
BstMWI GCNNNNNNNGC 2 cut(s) 411, 451
BstNI CCWGG 2 cut(s) 227, 386
BstSCI CCNGG 4 cut(s) 130, 190, 225, 384
BstSLI GKGCMC 1 cut(s) 447
BstUI CGCG 2 cut(s) 276, 539
BstV1I GCAGC 2 cut(s) 240, 387
BstV2I GAAGAC 2 cut(s) 86, 292
BstX2I RGATCY 1 cut(s) 291
BstYI RGATCY 1 cut(s) 291
BsuI GTATCC 1 cut(s) 761
BsuRI GGCC 1 cut(s) 384
BtsCI GGATG 4 cut(s) 138, 177, 216, 780
Cac8I GCNNGC 1 cut(s) 146
CfoI GCGC 6 cut(s) 225, 330, 374, 400, 405, 541
Cfr13I GGNCC 2 cut(s) 117, 283
CseI GACGC 1 cut(s) 583
Csp6I GTAC 4 cut(s) 86, 155, 205, 637
CviJI RGCY 9 cut(s) 195, 212, 253, 336, 384, 487, 586, 667, 731
CviKI_1 RGCY 9 cut(s) 195, 212, 253, 336, 384, 487, 586, 667, 731
CviQI GTAC 4 cut(s) 86, 155, 205, 637
DdeI CTNAG 2 cut(s) 424, 693
DpnI GATC 3 cut(s) 269, 293, 569
DpnII GATC 3 cut(s) 267, 291, 567
EaeI YGGCCR 1 cut(s) 382
EciI GGCGGA 2 cut(s) 131, 640
Eco130I CCWWGG 1 cut(s) 248
Eco47I GGWCC 2 cut(s) 117, 283
Eco72I CACGTG 2 cut(s) 590, 610
Eco88I CYCGRG 1 cut(s) 171
EcoRII CCWGG 2 cut(s) 225, 384
EcoT14I CCWWGG 1 cut(s) 248
ErhI CCWWGG 1 cut(s) 248
FaiI YATR 2 cut(s) 164, 752
FaqI GGGAC 2 cut(s) 296, 485
FauI CCCGC 3 cut(s) 153, 281, 459
Fnu4HI GCNGC 4 cut(s) 123, 254, 401, 455
FokI GGATG 4 cut(s) 125, 164, 203, 767
Fsp4HI GCNGC 4 cut(s) 123, 254, 401, 455
FspBI CTAG 1 cut(s) 249
GlaI GCGC 6 cut(s) 224, 329, 373, 399, 404, 540
GluI GCNGC 4 cut(s) 123, 254, 401, 455
HaeII RGCGCY 3 cut(s) 226, 331, 401
HaeIII GGCC 1 cut(s) 384
HapII CCGG 5 cut(s) 132, 192, 286, 331, 548
HgaI GACGC 1 cut(s) 583
HhaI GCGC 6 cut(s) 225, 330, 374, 400, 405, 541
Hin1I GRCGYC 1 cut(s) 594
Hin6I GCGC 6 cut(s) 223, 328, 372, 398, 403, 539
HinP1I GCGC 6 cut(s) 223, 328, 372, 398, 403, 539
HincII GTYRAC 1 cut(s) 232
HindII GTYRAC 1 cut(s) 232
HinfI GANTC 5 cut(s) 183, 350, 378, 408, 422
HpaII CCGG 5 cut(s) 132, 192, 286, 331, 548
HphI GGTGA 2 cut(s) 120, 262
Hpy166II GTNNAC 1 cut(s) 232
Hpy188I TCNGA 5 cut(s) 182, 188, 421, 687, 694
Hpy188III TCNNGA 3 cut(s) 316, 463, 792
Hpy8I GTNNAC 1 cut(s) 232
HpyAV CCTTC 4 cut(s) 68, 89, 499, 514
HpyCH4III ACNGT 2 cut(s) 154, 789
HpyCH4IV ACGT 5 cut(s) 42, 525, 578, 589, 609
HpyCH4V TGCA 1 cut(s) 366
HpyF10VI GCNNNNNNNGC 2 cut(s) 411, 451
HpyF3I CTNAG 2 cut(s) 424, 693
HpySE526I ACGT 5 cut(s) 42, 525, 578, 589, 609
Hsp92I GRCGYC 1 cut(s) 594
HspAI GCGC 6 cut(s) 223, 328, 372, 398, 403, 539
Kzo9I GATC 3 cut(s) 267, 291, 567
LmnI GCTCC 1 cut(s) 333
Lsp1109I GCAGC 2 cut(s) 240, 387
LweI GCATC 3 cut(s) 186, 375, 441
MaeI CTAG 1 cut(s) 249
MaeII ACGT 5 cut(s) 42, 525, 578, 589, 609
MaeIII GTNAC 1 cut(s) 134
MalI GATC 3 cut(s) 269, 293, 569
MbiI CCGCTC 1 cut(s) 574
MboI GATC 3 cut(s) 267, 291, 567
MboII GAAGA 4 cut(s) 86, 292, 301, 304
MflI RGATCY 1 cut(s) 291
MhlI GDGCHC 1 cut(s) 447
MluCI AATT 1 cut(s) 308
MlyI GAGTC 4 cut(s) 344, 387, 416, 417
MmeI TCCRAC 4 cut(s) 211, 369, 444, 546
MspA1I CMGCKG 2 cut(s) 114, 457
MspI CCGG 5 cut(s) 132, 192, 286, 331, 548
MspR9I CCNGG 4 cut(s) 132, 192, 227, 386
MteI GCGCNGCGC 1 cut(s) 401
MvaI CCWGG 2 cut(s) 227, 386
MvnI CGCG 2 cut(s) 276, 539
MwoI GCNNNNNNNGC 2 cut(s) 411, 451
NciI CCSGG 2 cut(s) 132, 192
NdeII GATC 3 cut(s) 267, 291, 567
NlaIV GGNNCC 2 cut(s) 284, 335
NmeAIII GCCGAG 2 cut(s) 431, 620
PcsI WCGNNNNNNNCGW 2 cut(s) 417, 504
PfeI GAWTC 1 cut(s) 183
Pfl23II CGTACG 1 cut(s) 204
PflFI GACNNNGTC 1 cut(s) 425
PkrI GCNGC 4 cut(s) 124, 255, 402, 456
PleI GAGTC 4 cut(s) 344, 386, 416, 416
PmaCI CACGTG 2 cut(s) 590, 610
PmlI CACGTG 2 cut(s) 590, 610
PpsI GAGTC 4 cut(s) 344, 386, 416, 416
Ppu21I YACGTR 3 cut(s) 43, 590, 610
Psp6I CCWGG 2 cut(s) 225, 384
PspCI CACGTG 2 cut(s) 590, 610
PspGI CCWGG 2 cut(s) 225, 384
PspLI CGTACG 1 cut(s) 204
PspN4I GGNNCC 2 cut(s) 284, 335
PspPI GGNCC 2 cut(s) 117, 283
PsuI RGATCY 1 cut(s) 291
PsyI GACNNNGTC 1 cut(s) 425
RsaI GTAC 4 cut(s) 87, 156, 206, 638
RsaNI GTAC 4 cut(s) 86, 155, 205, 637
SatI GCNGC 4 cut(s) 123, 254, 401, 455
Sau3AI GATC 3 cut(s) 267, 291, 567
Sau96I GGNCC 2 cut(s) 117, 283
ScaI AGTACT 1 cut(s) 638
SchI GAGTC 4 cut(s) 344, 387, 416, 417
ScrFI CCNGG 4 cut(s) 132, 192, 227, 386
SduI GDGCHC 1 cut(s) 447
SfaNI GCATC 3 cut(s) 186, 375, 441
SinI GGWCC 2 cut(s) 117, 283
Sse9I AATT 1 cut(s) 308
SspMI CTAG 1 cut(s) 249
StyD4I CCNGG 4 cut(s) 130, 190, 225, 384
StyI CCWWGG 1 cut(s) 248
TaaI ACNGT 2 cut(s) 154, 789
TaiI ACGT 5 cut(s) 45, 528, 581, 592, 612
TaqI TCGA 6 cut(s) 393, 435, 507, 513, 531, 570
TasI AATT 1 cut(s) 308
TatI WGTACW 2 cut(s) 85, 636
TauI GCSGC 2 cut(s) 125, 457
TfiI GAWTC 1 cut(s) 183
TseI GCWGC 2 cut(s) 253, 400
TspDTI ATGAA 2 cut(s) 17, 767
TspGWI ACGGA 3 cut(s) 80, 644, 752
Tth111I GACNNNGTC 1 cut(s) 425
VpaK11BI GGWCC 2 cut(s) 117, 283
XmaJI CCTAGG 1 cut(s) 248
XspI CTAG 1 cut(s) 249
ZrmI AGTACT 1 cut(s) 638
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.