Prupe.1G269200_v2.0.a1
WRKY Family

WRKY transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
27648447 .. 27651771
3325 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G269200.2

Sequence Viewer

Length: 1905 bp
ATGCCAAAGAGGTGTTCAAAAGCAATGGAGAACAATAATACTGAGGAAAATTCTTTCCTTGGAAATACACCAGTGGAAGACAAAACTAAGAAATCTGATGATGGTCATGATGAAGAGGGTACTTCCATGGAGATGGAAATAAGCAAGTCTTCCTCATCCATGGATATCACAATACAGGGAGGACATGGGTGGCTGGCTGAACCAGAGCAAACAAACACTTTGATGCCGTCTTCTTCTGCTGGAAAAGATAGAGCCCTTCTCAAGCACCCACAGGAGAATGAGCTCCAATCAGCTAAAGCTAAAATGGGGGAGGTTAAAGAAGAGAATGAAAAGTTAAAGCTGTTACTATCGCAAATCGTGAGGAATTACCAGTCTCTTCAGATGCATTTTCTTGGTCTTCTTCAAAAAGATGAAGAAGCTAAGAAATCTATGGATCCTAGTAGTTCTGCTCGTGATCAGTCGAACGAACAAGACGAAGAAGCTGACGAACTTGTGTCCCTTAGCCTTGGAAGAAGCTCAAGCACTGATCAGCCCAGAAAGGATGAACAGATGAAAAAGACTAGCCATTTCAGTAAAAATGGGAAAGGTGACGATCAAGAAGGACTCAACGGAGCTGGACTTGCACTGGAATTGGGCTGCAGATTCGAGCCAGCTGCTGATCAATCAACTGAAGTTGTTATGAAGAATTCAAGCTCTGATAATAGCTGCGGAGACCCCAAGGAAGATGACCCGACTGAGATATGGCCACCTAGCAAGACTTTGAAGACCACAAGAAGTGGGGATGATGAGGTTTCACAACAAACCCATTTGAAGAAAGCTAGGGTTTCTGTCAGAGCTAGATGCGATGCTCCAACGATGCATGATGGATGCCAATGGAGAAAATATGGACAGAAAATAGCAAAAGGAAATCCATGCCCTCGAGCGTACTATCGCTGCACTGTCTCACCATCCTGCCCAGTGAGAAAACAGGTGCAAAGATGTGCTGATGACATGTCCATATTAATCACAACCTACGAAGGAAGCCACAACCATCCACTTCCTATGTCAGCCACAGCCATGGCCTCCACCACCTCCGCTGCGGCTTCCATGCTTCAGTCTCACTCCTCCATCTCCCAACAAGGCCACACCGCCATGGCACCCATCTCTGCCTCCACCAACCTCCAAGGACTAAACTTCAGTACAAGTACTCTCTCCCAAAATTCAAGACTACCACAACACTTCTATTTCCCCAACAGTTCAATCTCAACCACAAATTCCCACCCAACCATCACTCTTGATCTCACTGCTCCATCTCCCTCTCACTTTGGACGATTTCCTGCAGCTGTCTTCTCTTCCAACCCAAGATATCCCTCCACACGTCTCAATTTTTCCTCATCTCCCTCCTCTTCTTTAGACCACAACAACAACACATTGCAGTTGCAAGCACCTTGGAACAACAATCACACTGCAGCTGACTATTTGAACTATGGGAATAGAGTACTTAACCAAGTTGGGTCAACTCTAAACATGGGAAAGCAATCAATATTTCAAGAACCTAATAATTTGTACCAATCTTACATACAAAATCAGAAGCCTCCTCCTCCTCCTCTTCCTCCCCCTCCTCATCAGCAGTTGATGTTGACAGAGACAATAGCCTCTGCAACAAAAACAATCACATCAAACCCTAAATTCCAATCAGCATTAGCAGCTGCACTCACATCATTTGTTGGTACTAATAATGGGGGTAGTGCTACTACTGGGGTCAGAGAAAATCATCATCATCATCAGCATCAAAGTAGCACTTCTACAGAAAGTGCATCTGGGCTGAAATTGAAGTGGGCTGAATCTTTGACAACAAATCCAATCTACCCACCAAGCCCAAATGGAATAGGGTGCGCATCAAGCTACTTGAACAAATCTTCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

635

Amino Acids

69.14

Weight (kDa)

6.52

Isoelectric Point (pI)

53.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1876
AccB1I GGYRCC 1 cut(s) 1135
AciI CCGC 4 cut(s) 708, 1074, 1079, 1128
AclWI GGATC 2 cut(s) 428, 441
AcoI YGGCCR 1 cut(s) 743
AcsI RAATTY 5 cut(s) 49, 685, 1198, 1252, 1667
AcuI CTGAAG 4 cut(s) 362, 690, 1076, 1159
AfaI GTAC 7 cut(s) 121, 926, 1180, 1186, 1479, 1547, 1711
AflIII ACRYGT 2 cut(s) 990, 1355
AjiI CACGTC 1 cut(s) 1358
AjuI GAANNNNNNNTTGG 1 cut(s) 30
Alw21I GWGCWC 1 cut(s) 285
Alw26I GTCTC 6 cut(s) 378, 705, 946, 1101, 1364, 1619
AlwI GGATC 2 cut(s) 428, 441
AlwNI CAGNNNCTG 1 cut(s) 656
Ama87I CYCGRG 1 cut(s) 918
AoxI GGCC 3 cut(s) 743, 1059, 1120
ApeKI GCWGC 9 cut(s) 636, 653, 705, 933, 1076, 1319, 1448, 1685, 1688
ApoI RAATTY 5 cut(s) 49, 685, 1198, 1252, 1667
AseI ATTAAT 1 cut(s) 1001
AspLEI GCGC 1 cut(s) 1877
AsuHPI GGTGA 2 cut(s) 599, 936
AvaI CYCGRG 1 cut(s) 918
BalI TGGCCA 1 cut(s) 745
BamHI GGATCC 1 cut(s) 433
BanI GGYRCC 1 cut(s) 1135
BanII GRGCYC 2 cut(s) 256, 285
BauI CACGAG 1 cut(s) 450
BbsI GAAGAC 6 cut(s) 84, 141, 222, 389, 770, 1318
Bbv12I GWGCWC 1 cut(s) 285
BbvI GCAGC 9 cut(s) 623, 640, 692, 920, 1063, 1331, 1460, 1675, 1697
BccI CCATC 9 cut(s) 95, 127, 857, 955, 1038, 1115, 1148, 1274, 1297
BceAI ACGGC 1 cut(s) 211
BcgI CGANNNNNNTGC 2 cut(s) 635, 669
BclI TGATCA 3 cut(s) 454, 526, 658
BcoDI GTCTC 6 cut(s) 378, 705, 946, 1101, 1364, 1619
BfaI CTAG 5 cut(s) 438, 561, 750, 819, 837
BfmI CTRYAG 4 cut(s) 637, 1317, 1446, 1785
BmcAI AGTACT 2 cut(s) 1186, 1479
BmeT110I CYCGRG 1 cut(s) 918
BmgBI CACGTC 1 cut(s) 1358
BmiI GGNNCC 2 cut(s) 435, 1137
BmrI ACTGGG 2 cut(s) 950, 1746
BmsI GCATC 9 cut(s) 213, 372, 830, 835, 846, 857, 1777, 1805, 1886
BmuI ACTGGG 2 cut(s) 950, 1746
BpiI GAAGAC 6 cut(s) 84, 141, 222, 389, 770, 1318
BplI GAGNNNNNCTC 2 cut(s) 243, 275
Bpu10I CCTNAGC 1 cut(s) 500
BpuEI CTTGAG 2 cut(s) 245, 502
BsaI GGTCTC 1 cut(s) 705
BsaJI CCNNGG 9 cut(s) 58, 126, 159, 505, 717, 1056, 1131, 1162, 1427
Bse1I ACTGG 5 cut(s) 71, 370, 630, 956, 1741
Bse3DI GCAATG 2 cut(s) 30, 1409
BseDI CCNNGG 9 cut(s) 58, 126, 159, 505, 717, 1056, 1131, 1162, 1427
BseGI GGATG 6 cut(s) 155, 547, 787, 872, 947, 1030
BseMI GCAATG 2 cut(s) 30, 1409
BseMII CTCAG 2 cut(s) 33, 726
BseNI ACTGG 5 cut(s) 71, 370, 630, 956, 1741
BseRI GAGGAG 7 cut(s) 1093, 1372, 1566, 1569, 1572, 1575, 1590
BseXI GCAGC 9 cut(s) 623, 640, 692, 920, 1063, 1331, 1460, 1675, 1697
BsgI GTGCAG 2 cut(s) 919, 1674
BshFI GGCC 3 cut(s) 745, 1061, 1122
BshNI GGYRCC 1 cut(s) 1135
BsiHKAI GWGCWC 1 cut(s) 285
BsiHKCI CYCGRG 1 cut(s) 918
BslFI GGGAC 1 cut(s) 481
BsmAI GTCTC 6 cut(s) 378, 705, 946, 1101, 1364, 1619
BsmBI CGTCTC 1 cut(s) 1364
BsmFI GGGAC 1 cut(s) 481
BsnI GGCC 3 cut(s) 745, 1061, 1122
Bso31I GGTCTC 1 cut(s) 705
BsoBI CYCGRG 1 cut(s) 918
Bsp1286I GDGCHC 2 cut(s) 256, 285
Bsp143I GATC 6 cut(s) 433, 454, 526, 592, 658, 1276
Bsp19I CCATGG 4 cut(s) 126, 159, 1056, 1131
BspACI CCGC 4 cut(s) 708, 1074, 1079, 1128
BspANI GGCC 3 cut(s) 745, 1061, 1122
BspCNI CTCAG 2 cut(s) 34, 727
BspHI TCATGA 1 cut(s) 106
BspLI GGNNCC 2 cut(s) 435, 1137
BspMAI CTGCAG 3 cut(s) 641, 1321, 1450
BspPI GGATC 2 cut(s) 428, 441
BspT107I GGYRCC 1 cut(s) 1135
BspTNI GGTCTC 1 cut(s) 705
BsrDI GCAATG 2 cut(s) 30, 1409
BsrI ACTGG 5 cut(s) 71, 370, 630, 956, 1741
BssECI CCNNGG 9 cut(s) 58, 126, 159, 505, 717, 1056, 1131, 1162, 1427
BssMI GATC 6 cut(s) 433, 454, 526, 592, 658, 1276
BssSI CACGAG 1 cut(s) 450
BssT1I CCWWGG 9 cut(s) 58, 126, 159, 505, 717, 1056, 1131, 1162, 1427
Bst2BI CACGAG 1 cut(s) 450
Bst4CI ACNGT 2 cut(s) 940, 1235
Bst6I CTCTTC 6 cut(s) 108, 315, 381, 1336, 1390, 1593
BstC8I GCNNGC 3 cut(s) 195, 651, 1422
BstDEI CTNAG 5 cut(s) 42, 87, 420, 500, 735
BstDSI CCRYGG 4 cut(s) 126, 159, 1056, 1131
BstF5I GGATG 6 cut(s) 155, 547, 787, 872, 947, 1030
BstHHI GCGC 1 cut(s) 1877
BstKTI GATC 6 cut(s) 436, 457, 529, 595, 661, 1279
BstMAI GTCTC 6 cut(s) 378, 705, 946, 1101, 1364, 1619
BstMBI GATC 6 cut(s) 433, 454, 526, 592, 658, 1276
BstMWI GCNNNNNNNGC 3 cut(s) 620, 1685, 1881
BstNSI RCATGY 1 cut(s) 994
BstSFI CTRYAG 4 cut(s) 637, 1317, 1446, 1785
BstV1I GCAGC 9 cut(s) 623, 640, 692, 920, 1063, 1331, 1460, 1675, 1697
BstV2I GAAGAC 6 cut(s) 84, 141, 222, 389, 770, 1318
BstX2I RGATCY 1 cut(s) 433
BstXI CCANNNNNNTGG 2 cut(s) 133, 1057
BstYI RGATCY 1 cut(s) 433
BsuRI GGCC 3 cut(s) 745, 1061, 1122
BtgI CCRYGG 4 cut(s) 126, 159, 1056, 1131
BtgZI GCGATG 1 cut(s) 858
BtrI CACGTC 1 cut(s) 1358
BtsCI GGATG 6 cut(s) 155, 547, 787, 872, 947, 1030
BtsI GCAGTG 2 cut(s) 1281, 1443
BtsIMutI CAGTG 7 cut(s) 78, 522, 623, 936, 963, 1281, 1443
Cac8I GCNNGC 3 cut(s) 195, 651, 1422
CaiI CAGNNNCTG 1 cut(s) 656
CciI TCATGA 1 cut(s) 106
CfoI GCGC 1 cut(s) 1877
Csp6I GTAC 7 cut(s) 120, 925, 1179, 1185, 1478, 1546, 1710
CviQI GTAC 7 cut(s) 120, 925, 1179, 1185, 1478, 1546, 1710
DdeI CTNAG 5 cut(s) 42, 87, 420, 500, 735
DpnI GATC 6 cut(s) 435, 456, 528, 594, 660, 1278
DpnII GATC 6 cut(s) 433, 454, 526, 592, 658, 1276
EaeI YGGCCR 1 cut(s) 743
Eam1104I CTCTTC 6 cut(s) 108, 315, 381, 1336, 1390, 1593
EarI CTCTTC 6 cut(s) 108, 315, 381, 1336, 1390, 1593
Ecl136II GAGCTC 1 cut(s) 283
Eco130I CCWWGG 9 cut(s) 58, 126, 159, 505, 717, 1056, 1131, 1162, 1427
Eco24I GRGCYC 2 cut(s) 256, 285
Eco31I GGTCTC 1 cut(s) 705
Eco32I GATATC 2 cut(s) 166, 1346
Eco53kI GAGCTC 1 cut(s) 283
Eco57I CTGAAG 4 cut(s) 362, 690, 1076, 1159
Eco88I CYCGRG 1 cut(s) 918
EcoICRI GAGCTC 1 cut(s) 283
EcoRI GAATTC 1 cut(s) 685
EcoRV GATATC 2 cut(s) 166, 1346
EcoT14I CCWWGG 9 cut(s) 58, 126, 159, 505, 717, 1056, 1131, 1162, 1427
EcoT22I ATGCAT 2 cut(s) 387, 861
EcoT38I GRGCYC 2 cut(s) 256, 285
ErhI CCWWGG 9 cut(s) 58, 126, 159, 505, 717, 1056, 1131, 1162, 1427
Esp3I CGTCTC 1 cut(s) 1364
FalI AAGNNNNNCTT 4 cut(s) 133, 165, 1765, 1797
FaqI GGGAC 1 cut(s) 481
FbaI TGATCA 3 cut(s) 454, 526, 658
FokI GGATG 6 cut(s) 142, 554, 794, 879, 934, 1017
FriOI GRGCYC 2 cut(s) 256, 285
FspAI RTGCGCAY 1 cut(s) 1876
FspBI CTAG 5 cut(s) 438, 561, 750, 819, 837
FspI TGCGCA 1 cut(s) 1876
GlaI GCGC 1 cut(s) 1876
HaeIII GGCC 3 cut(s) 745, 1061, 1122
HhaI GCGC 1 cut(s) 1877
Hin6I GCGC 1 cut(s) 1875
HinP1I GCGC 1 cut(s) 1875
HincII GTYRAC 2 cut(s) 1497, 1620
HindII GTYRAC 2 cut(s) 1497, 1620
HinfI GANTC 3 cut(s) 603, 642, 1823
HphI GGTGA 2 cut(s) 599, 936
Hpy166II GTNNAC 2 cut(s) 1497, 1620
Hpy188I TCNGA 6 cut(s) 97, 381, 697, 833, 1569, 1745
Hpy188III TCNNGA 8 cut(s) 107, 358, 452, 596, 1203, 1274, 1529, 1902
Hpy8I GTNNAC 2 cut(s) 1497, 1620
HpyAV CCTTC 3 cut(s) 266, 593, 1010
HpyCH4III ACNGT 2 cut(s) 940, 1235
HpyCH4IV ACGT 1 cut(s) 1357
HpyF10VI GCNNNNNNNGC 3 cut(s) 620, 1685, 1881
HpyF3I CTNAG 5 cut(s) 42, 87, 420, 500, 735
HpySE526I ACGT 1 cut(s) 1357
HspAI GCGC 1 cut(s) 1875
Ksp22I TGATCA 3 cut(s) 454, 526, 658
Kzo9I GATC 6 cut(s) 433, 454, 526, 592, 658, 1276
LmnI GCTCC 4 cut(s) 288, 611, 853, 1291
Lsp1109I GCAGC 9 cut(s) 623, 640, 692, 920, 1063, 1331, 1460, 1675, 1697
LweI GCATC 9 cut(s) 213, 372, 830, 835, 846, 857, 1777, 1805, 1886
MaeI CTAG 5 cut(s) 438, 561, 750, 819, 837
MaeII ACGT 1 cut(s) 1357
MaeIII GTNAC 2 cut(s) 342, 587
MalI GATC 6 cut(s) 435, 456, 528, 594, 660, 1278
MboI GATC 6 cut(s) 433, 454, 526, 592, 658, 1276
MflI RGATCY 1 cut(s) 433
MhlI GDGCHC 2 cut(s) 256, 285
MlsI TGGCCA 1 cut(s) 745
MluNI TGGCCA 1 cut(s) 745
MlyI GAGTC 1 cut(s) 597
MmeI TCCRAC 2 cut(s) 875, 1359
Mox20I TGGCCA 1 cut(s) 745
Mph1103I ATGCAT 2 cut(s) 387, 861
MscI TGGCCA 1 cut(s) 745
MseI TTAA 4 cut(s) 315, 335, 1001, 1482
MslI CAYNNNNRTG 4 cut(s) 131, 221, 1055, 1130
Msp20I TGGCCA 1 cut(s) 745
MspA1I CMGCKG 5 cut(s) 653, 1076, 1322, 1451, 1688
MwoI GCNNNNNNNGC 3 cut(s) 620, 1685, 1881
NcoI CCATGG 4 cut(s) 126, 159, 1056, 1131
NdeII GATC 6 cut(s) 433, 454, 526, 592, 658, 1276
NlaIV GGNNCC 2 cut(s) 435, 1137
NmuCI GTSAC 1 cut(s) 587
NsbI TGCGCA 1 cut(s) 1876
NsiI ATGCAT 2 cut(s) 387, 861
NspI RCATGY 1 cut(s) 994
PaeR7I CTCGAG 1 cut(s) 918
PagI TCATGA 1 cut(s) 106
PciI ACATGT 1 cut(s) 990
PcsI WCGNNNNNNNCGW 1 cut(s) 471
PfeI GAWTC 2 cut(s) 642, 1823
PleI GAGTC 1 cut(s) 597
PpsI GAGTC 1 cut(s) 597
PscI ACATGT 1 cut(s) 990
PshBI ATTAAT 1 cut(s) 1001
Psp124BI GAGCTC 1 cut(s) 285
PspN4I GGNNCC 2 cut(s) 435, 1137
PspXI VCTCGAGB 1 cut(s) 918
PstI CTGCAG 3 cut(s) 641, 1321, 1450
PstNI CAGNNNCTG 1 cut(s) 656
PsuI RGATCY 1 cut(s) 433
PvuII CAGCTG 4 cut(s) 653, 1322, 1451, 1688
RsaI GTAC 7 cut(s) 121, 926, 1180, 1186, 1479, 1547, 1711
RsaNI GTAC 7 cut(s) 120, 925, 1179, 1185, 1478, 1546, 1710
RseI CAYNNNNRTG 4 cut(s) 131, 221, 1055, 1130
SacI GAGCTC 1 cut(s) 285
SaqAI TTAA 4 cut(s) 315, 335, 1001, 1482
Sau3AI GATC 6 cut(s) 433, 454, 526, 592, 658, 1276
ScaI AGTACT 2 cut(s) 1186, 1479
SchI GAGTC 1 cut(s) 597
SduI GDGCHC 2 cut(s) 256, 285
SfaNI GCATC 9 cut(s) 213, 372, 830, 835, 846, 857, 1777, 1805, 1886
SfcI CTRYAG 4 cut(s) 637, 1317, 1446, 1785
Sfr274I CTCGAG 1 cut(s) 918
SlaI CTCGAG 1 cut(s) 918
SmiMI CAYNNNNRTG 4 cut(s) 131, 221, 1055, 1130
SmlI CTYRAG 3 cut(s) 260, 517, 918
SmoI CTYRAG 3 cut(s) 260, 517, 918
SsiI CCGC 4 cut(s) 708, 1074, 1079, 1128
SspI AATATT 1 cut(s) 1524
SspMI CTAG 5 cut(s) 438, 561, 750, 819, 837
SstI GAGCTC 1 cut(s) 285
StyI CCWWGG 9 cut(s) 58, 126, 159, 505, 717, 1056, 1131, 1162, 1427
TaaI ACNGT 2 cut(s) 940, 1235
TaiI ACGT 1 cut(s) 1360
TaqI TCGA 3 cut(s) 461, 645, 919
TatI WGTACW 3 cut(s) 1178, 1184, 1477
TauI GCSGC 1 cut(s) 1082
TfiI GAWTC 2 cut(s) 642, 1823
Tru1I TTAA 4 cut(s) 315, 335, 1001, 1482
Tru9I TTAA 4 cut(s) 315, 335, 1001, 1482
TscAI CASTG 7 cut(s) 78, 529, 630, 943, 963, 1288, 1450
TseFI GTSAC 1 cut(s) 587
TseI GCWGC 9 cut(s) 636, 653, 705, 933, 1076, 1319, 1448, 1685, 1688
Tsp45I GTSAC 1 cut(s) 587
TspDTI ATGAA 6 cut(s) 126, 342, 426, 558, 566, 695
TspGWI ACGGA 1 cut(s) 624
TspRI CASTG 7 cut(s) 78, 529, 630, 943, 963, 1288, 1450
VspI ATTAAT 1 cut(s) 1001
XapI RAATTY 5 cut(s) 49, 685, 1198, 1252, 1667
XceI RCATGY 1 cut(s) 994
XhoI CTCGAG 1 cut(s) 918
XspI CTAG 5 cut(s) 438, 561, 750, 819, 837
ZrmI AGTACT 2 cut(s) 1186, 1479
Zsp2I ATGCAT 2 cut(s) 387, 861
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.