WRKY transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G69810 AT1G69810 |
| fragaria_vesca | FvH4_4g31790 FvH4_4g31790 FvH4_4g31790 |
| malus_domestica | MD13G1077900.v1.1 MD16G1077700.v1.1 |
| prunus_persica | Prupe.1G269200_v2.0.a1 Prupe.1G269200_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0440391 |
| rosa_laevigata | RLG00000006186 |
| rosa_multiflora | Rmu_co8279817.1_g000001 Rmu_co8317961.1_g000001 Rmu_sc0000938.1_g000002 Rmu_sc0001685.1_g000047 |
| rosa_roxburghii | Rroxscaffold_5G00381260 |
| rosa_rugosa | Rorug04G0325900 |
| rosa_samantha | Rh4AG377100 Rh4BG390100 Rh4CG404900 Rh4DG383800 |
| rosa_wichuraiana | Rw4G032290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1855 |
| AclWI | GGATC | 2 cut(s) | 654, 806 |
| AcoI | YGGCCR | 3 cut(s) | 842, 1032, 1153 |
| AcsI | RAATTY | 3 cut(s) | 190, 1189, 1567 |
| AcuI | CTGAAG | 5 cut(s) | 309, 455, 588, 1055, 1305 |
| AcyI | GRCGYC | 1 cut(s) | 1808 |
| AfaI | GTAC | 7 cut(s) | 538, 616, 622, 1348, 1464, 1714, 1765 |
| AflIII | ACRYGT | 1 cut(s) | 969 |
| AhlI | ACTAGT | 2 cut(s) | 617, 1736 |
| AjiI | CACGTC | 1 cut(s) | 1689 |
| AjnI | CCWGG | 1 cut(s) | 462 |
| Alw21I | GWGCWC | 1 cut(s) | 343 |
| Alw26I | GTCTC | 5 cut(s) | 34, 1080, 1184, 1192, 1610 |
| AlwI | GGATC | 2 cut(s) | 654, 806 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 752, 1586 |
| Ama87I | CYCGRG | 3 cut(s) | 107, 607, 1342 |
| AoxI | GGCC | 5 cut(s) | 842, 1032, 1038, 1099, 1153 |
| ApoI | RAATTY | 3 cut(s) | 190, 1189, 1567 |
| AseI | ATTAAT | 2 cut(s) | 795, 1815 |
| AspLEI | GCGC | 2 cut(s) | 445, 1856 |
| AspS9I | GGNCC | 1 cut(s) | 1160 |
| AsuC2I | CCSGG | 1 cut(s) | 116 |
| AsuHPI | GGTGA | 6 cut(s) | 94, 239, 312, 1162, 1261, 1808 |
| AvaI | CYCGRG | 3 cut(s) | 107, 607, 1342 |
| AvaII | GGWCC | 1 cut(s) | 1160 |
| BalI | TGGCCA | 1 cut(s) | 1155 |
| BanII | GRGCYC | 1 cut(s) | 343 |
| BbsI | GAAGAC | 4 cut(s) | 828, 869, 972, 1497 |
| Bbv12I | GWGCWC | 1 cut(s) | 343 |
| BbvCI | CCTCAGC | 1 cut(s) | 1596 |
| BccI | CCATC | 5 cut(s) | 218, 1017, 1133, 1297, 1837 |
| BceAI | ACGGC | 1 cut(s) | 1047 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 915, 949 |
| BciT130I | CCWGG | 1 cut(s) | 464 |
| BciVI | GTATCC | 1 cut(s) | 520 |
| BclI | TGATCA | 4 cut(s) | 544, 628, 757, 981 |
| BcnI | CCSGG | 1 cut(s) | 116 |
| BcoDI | GTCTC | 5 cut(s) | 34, 1080, 1184, 1192, 1610 |
| BcuI | ACTAGT | 2 cut(s) | 617, 1736 |
| BfaI | CTAG | 6 cut(s) | 618, 849, 912, 930, 1716, 1737 |
| BfmI | CTRYAG | 2 cut(s) | 311, 1437 |
| BfuI | GTATCC | 1 cut(s) | 520 |
| BmcAI | AGTACT | 3 cut(s) | 616, 622, 1765 |
| Bme1390I | CCNGG | 2 cut(s) | 116, 464 |
| Bme18I | GGWCC | 1 cut(s) | 1160 |
| BmeT110I | CYCGRG | 3 cut(s) | 107, 607, 1342 |
| BmgBI | CACGTC | 1 cut(s) | 1689 |
| BmgT120I | GGNCC | 1 cut(s) | 1160 |
| BmiI | GGNNCC | 2 cut(s) | 29, 113 |
| BmrFI | CCNGG | 2 cut(s) | 116, 464 |
| BmsI | GCATC | 7 cut(s) | 465, 719, 923, 928, 1070, 1609, 1865 |
| BpiI | GAAGAC | 4 cut(s) | 828, 869, 972, 1497 |
| Bpu10I | CCTNAGC | 2 cut(s) | 590, 1596 |
| BpuMI | CCSGG | 1 cut(s) | 116 |
| BsaBI | GATNNNNATC | 2 cut(s) | 217, 733 |
| BsaHI | GRCGYC | 1 cut(s) | 1808 |
| BsaJI | CCNNGG | 5 cut(s) | 595, 1029, 1035, 1150, 1156 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 258, 288 |
| Bse1I | ACTGG | 2 cut(s) | 381, 531 |
| Bse8I | GATNNNNATC | 2 cut(s) | 217, 733 |
| BseBI | CCWGG | 1 cut(s) | 464 |
| BseDI | CCNNGG | 5 cut(s) | 595, 1029, 1035, 1150, 1156 |
| BseGI | GGATG | 5 cut(s) | 734, 1009, 1061, 1082, 1488 |
| BseJI | GATNNNNATC | 2 cut(s) | 217, 733 |
| BseMII | CTCAG | 4 cut(s) | 356, 652, 1586, 1610 |
| BseNI | ACTGG | 2 cut(s) | 381, 531 |
| BseRI | GAGGAG | 1 cut(s) | 282 |
| BseYI | CCCAGC | 1 cut(s) | 184 |
| BshFI | GGCC | 5 cut(s) | 844, 1034, 1040, 1101, 1155 |
| BsiHKAI | GWGCWC | 1 cut(s) | 343 |
| BsiHKCI | CYCGRG | 3 cut(s) | 107, 607, 1342 |
| BsiSI | CCGG | 1 cut(s) | 115 |
| BslFI | GGGAC | 2 cut(s) | 571, 1471 |
| BsmAI | GTCTC | 5 cut(s) | 34, 1080, 1184, 1192, 1610 |
| BsmFI | GGGAC | 2 cut(s) | 571, 1471 |
| BsnI | GGCC | 5 cut(s) | 844, 1034, 1040, 1101, 1155 |
| BsoBI | CYCGRG | 3 cut(s) | 107, 607, 1342 |
| Bsp1286I | GDGCHC | 1 cut(s) | 343 |
| Bsp143I | GATC | 9 cut(s) | 544, 628, 646, 669, 734, 757, 811, 981, 1276 |
| Bsp19I | CCATGG | 3 cut(s) | 1035, 1150, 1156 |
| BspANI | GGCC | 5 cut(s) | 844, 1034, 1040, 1101, 1155 |
| BspCNI | CTCAG | 4 cut(s) | 355, 651, 1585, 1609 |
| BspHI | TCATGA | 3 cut(s) | 625, 652, 760 |
| BspLI | GGNNCC | 2 cut(s) | 29, 113 |
| BspMAI | CTGCAG | 2 cut(s) | 315, 1441 |
| BspPI | GGATC | 2 cut(s) | 654, 806 |
| BsrI | ACTGG | 2 cut(s) | 381, 531 |
| BssECI | CCNNGG | 5 cut(s) | 595, 1029, 1035, 1150, 1156 |
| BssMI | GATC | 9 cut(s) | 544, 628, 646, 669, 734, 757, 811, 981, 1276 |
| BssNI | GRCGYC | 1 cut(s) | 1808 |
| BssT1I | CCWWGG | 4 cut(s) | 595, 1035, 1150, 1156 |
| Bst2UI | CCWGG | 1 cut(s) | 464 |
| Bst4CI | ACNGT | 7 cut(s) | 559, 949, 1212, 1218, 1235, 1267, 1462 |
| Bst6I | CTCTTC | 2 cut(s) | 198, 1384 |
| BstACI | GRCGYC | 1 cut(s) | 1808 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1586 |
| BstC8I | GCNNGC | 3 cut(s) | 350, 747, 1441 |
| BstDEI | CTNAG | 8 cut(s) | 342, 590, 638, 834, 1310, 1572, 1596, 1656 |
| BstDSI | CCRYGG | 4 cut(s) | 1029, 1035, 1150, 1156 |
| BstEII | GGTNACC | 2 cut(s) | 998, 1326 |
| BstF5I | GGATG | 5 cut(s) | 734, 1009, 1061, 1082, 1488 |
| BstHHI | GCGC | 2 cut(s) | 445, 1856 |
| BstKTI | GATC | 9 cut(s) | 547, 631, 649, 672, 737, 760, 814, 984, 1279 |
| BstMAI | GTCTC | 5 cut(s) | 34, 1080, 1184, 1192, 1610 |
| BstMBI | GATC | 9 cut(s) | 544, 628, 646, 669, 734, 757, 811, 981, 1276 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 713, 1586, 1637, 1676 |
| BstNI | CCWGG | 1 cut(s) | 464 |
| BstNSI | RCATGY | 1 cut(s) | 973 |
| BstPI | GGTNACC | 2 cut(s) | 998, 1326 |
| BstSCI | CCNGG | 2 cut(s) | 114, 462 |
| BstSFI | CTRYAG | 2 cut(s) | 311, 1437 |
| BstV2I | GAAGAC | 4 cut(s) | 828, 869, 972, 1497 |
| BstX2I | RGATCY | 1 cut(s) | 811 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 1036, 1157, 1496 |
| BstYI | RGATCY | 1 cut(s) | 811 |
| BsuI | GTATCC | 1 cut(s) | 520 |
| BsuRI | GGCC | 5 cut(s) | 844, 1034, 1040, 1101, 1155 |
| BtgI | CCRYGG | 4 cut(s) | 1029, 1035, 1150, 1156 |
| BtgZI | GCGATG | 1 cut(s) | 951 |
| BtrI | CACGTC | 1 cut(s) | 1689 |
| BtsCI | GGATG | 5 cut(s) | 734, 1009, 1061, 1082, 1488 |
| BtsI | GCAGTG | 1 cut(s) | 1281 |
| BtsIMutI | CAGTG | 2 cut(s) | 954, 1281 |
| Cac8I | GCNNGC | 3 cut(s) | 350, 747, 1441 |
| CaiI | CAGNNNCTG | 2 cut(s) | 752, 1586 |
| CciI | TCATGA | 3 cut(s) | 625, 652, 760 |
| CfoI | GCGC | 2 cut(s) | 445, 1856 |
| Cfr13I | GGNCC | 1 cut(s) | 1160 |
| CseI | GACGC | 1 cut(s) | 1816 |
| Csp6I | GTAC | 7 cut(s) | 537, 615, 621, 1347, 1463, 1713, 1764 |
| CviQI | GTAC | 7 cut(s) | 537, 615, 621, 1347, 1463, 1713, 1764 |
| DdeI | CTNAG | 8 cut(s) | 342, 590, 638, 834, 1310, 1572, 1596, 1656 |
| DpnI | GATC | 9 cut(s) | 546, 630, 648, 671, 736, 759, 813, 983, 1278 |
| DpnII | GATC | 9 cut(s) | 544, 628, 646, 669, 734, 757, 811, 981, 1276 |
| EaeI | YGGCCR | 3 cut(s) | 842, 1032, 1153 |
| Eam1104I | CTCTTC | 2 cut(s) | 198, 1384 |
| EarI | CTCTTC | 2 cut(s) | 198, 1384 |
| Ecl136II | GAGCTC | 1 cut(s) | 341 |
| Eco130I | CCWWGG | 4 cut(s) | 595, 1035, 1150, 1156 |
| Eco147I | AGGCCT | 1 cut(s) | 1101 |
| Eco24I | GRGCYC | 1 cut(s) | 343 |
| Eco47I | GGWCC | 1 cut(s) | 1160 |
| Eco53kI | GAGCTC | 1 cut(s) | 341 |
| Eco57I | CTGAAG | 5 cut(s) | 309, 455, 588, 1055, 1305 |
| Eco88I | CYCGRG | 3 cut(s) | 107, 607, 1342 |
| Eco91I | GGTNACC | 2 cut(s) | 998, 1326 |
| EcoICRI | GAGCTC | 1 cut(s) | 341 |
| EcoO65I | GGTNACC | 2 cut(s) | 998, 1326 |
| EcoRI | GAATTC | 1 cut(s) | 1189 |
| EcoRII | CCWGG | 1 cut(s) | 462 |
| EcoT14I | CCWWGG | 4 cut(s) | 595, 1035, 1150, 1156 |
| EcoT22I | ATGCAT | 1 cut(s) | 480 |
| EcoT38I | GRGCYC | 1 cut(s) | 343 |
| ErhI | CCWWGG | 4 cut(s) | 595, 1035, 1150, 1156 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 696, 728, 1303, 1335 |
| FaqI | GGGAC | 2 cut(s) | 571, 1471 |
| FauI | CCCGC | 2 cut(s) | 1438, 1712 |
| FbaI | TGATCA | 4 cut(s) | 544, 628, 757, 981 |
| FokI | GGATG | 5 cut(s) | 741, 996, 1048, 1069, 1495 |
| FriOI | GRGCYC | 1 cut(s) | 343 |
| FspAI | RTGCGCAY | 1 cut(s) | 1855 |
| FspBI | CTAG | 6 cut(s) | 618, 849, 912, 930, 1716, 1737 |
| FspI | TGCGCA | 1 cut(s) | 1855 |
| GlaI | GCGC | 2 cut(s) | 444, 1855 |
| GsaI | CCCAGC | 1 cut(s) | 188 |
| HaeIII | GGCC | 5 cut(s) | 844, 1034, 1040, 1101, 1155 |
| HapII | CCGG | 1 cut(s) | 115 |
| HgaI | GACGC | 1 cut(s) | 1816 |
| HhaI | GCGC | 2 cut(s) | 445, 1856 |
| Hin1I | GRCGYC | 1 cut(s) | 1808 |
| Hin6I | GCGC | 2 cut(s) | 443, 1854 |
| HinP1I | GCGC | 2 cut(s) | 443, 1854 |
| HincII | GTYRAC | 1 cut(s) | 1108 |
| HindII | GTYRAC | 1 cut(s) | 1108 |
| HinfI | GANTC | 3 cut(s) | 233, 1799, 1845 |
| HpaII | CCGG | 1 cut(s) | 115 |
| HphI | GGTGA | 6 cut(s) | 94, 239, 312, 1162, 1261, 1808 |
| Hpy166II | GTNNAC | 2 cut(s) | 1108, 1611 |
| Hpy188III | TCNNGA | 8 cut(s) | 109, 451, 485, 626, 653, 761, 1197, 1535 |
| Hpy8I | GTNNAC | 2 cut(s) | 1108, 1611 |
| Hpy99I | CGWCG | 2 cut(s) | 1375, 1888 |
| HpyAV | CCTTC | 7 cut(s) | 12, 233, 284, 327, 448, 766, 1329 |
| HpyCH4III | ACNGT | 7 cut(s) | 559, 949, 1212, 1218, 1235, 1267, 1462 |
| HpyCH4IV | ACGT | 1 cut(s) | 1688 |
| HpyCH4V | TGCA | 7 cut(s) | 313, 478, 716, 732, 952, 1439, 1631 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 713, 1586, 1637, 1676 |
| HpyF3I | CTNAG | 8 cut(s) | 342, 590, 638, 834, 1310, 1572, 1596, 1656 |
| HpySE526I | ACGT | 1 cut(s) | 1688 |
| Hsp92I | GRCGYC | 1 cut(s) | 1808 |
| HspAI | GCGC | 2 cut(s) | 443, 1854 |
| Ksp22I | TGATCA | 4 cut(s) | 544, 628, 757, 981 |
| Kzo9I | GATC | 9 cut(s) | 544, 628, 646, 669, 734, 757, 811, 981, 1276 |
| LmnI | GCTCC | 7 cut(s) | 111, 127, 791, 946, 1291, 1588, 1594 |
| LweI | GCATC | 7 cut(s) | 465, 719, 923, 928, 1070, 1609, 1865 |
| MaeI | CTAG | 6 cut(s) | 618, 849, 912, 930, 1716, 1737 |
| MaeII | ACGT | 1 cut(s) | 1688 |
| MaeIII | GTNAC | 7 cut(s) | 553, 829, 998, 1212, 1267, 1326, 1739 |
| MalI | GATC | 9 cut(s) | 546, 630, 648, 671, 736, 759, 813, 983, 1278 |
| MboI | GATC | 9 cut(s) | 544, 628, 646, 669, 734, 757, 811, 981, 1276 |
| MflI | RGATCY | 1 cut(s) | 811 |
| MhlI | GDGCHC | 1 cut(s) | 343 |
| MlsI | TGGCCA | 1 cut(s) | 1155 |
| MluNI | TGGCCA | 1 cut(s) | 1155 |
| MlyI | GAGTC | 1 cut(s) | 1808 |
| MmeI | TCCRAC | 1 cut(s) | 968 |
| Mox20I | TGGCCA | 1 cut(s) | 1155 |
| Mph1103I | ATGCAT | 1 cut(s) | 480 |
| MscI | TGGCCA | 1 cut(s) | 1155 |
| MseI | TTAA | 6 cut(s) | 777, 795, 1422, 1512, 1749, 1815 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1034, 1155 |
| Msp20I | TGGCCA | 1 cut(s) | 1155 |
| MspA1I | CMGCKG | 5 cut(s) | 542, 749, 1055, 1433, 1679 |
| MspI | CCGG | 1 cut(s) | 115 |
| MspR9I | CCNGG | 2 cut(s) | 116, 464 |
| MvaI | CCWGG | 1 cut(s) | 464 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 713, 1586, 1637, 1676 |
| NciI | CCSGG | 1 cut(s) | 116 |
| NcoI | CCATGG | 3 cut(s) | 1035, 1150, 1156 |
| NdeII | GATC | 9 cut(s) | 544, 628, 646, 669, 734, 757, 811, 981, 1276 |
| NlaIV | GGNNCC | 2 cut(s) | 29, 113 |
| NmuCI | GTSAC | 3 cut(s) | 1212, 1267, 1739 |
| NsbI | TGCGCA | 1 cut(s) | 1855 |
| NsiI | ATGCAT | 1 cut(s) | 480 |
| NspI | RCATGY | 1 cut(s) | 973 |
| PaeR7I | CTCGAG | 2 cut(s) | 607, 1342 |
| PagI | TCATGA | 3 cut(s) | 625, 652, 760 |
| PceI | AGGCCT | 1 cut(s) | 1101 |
| PciI | ACATGT | 1 cut(s) | 969 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1370 |
| PfeI | GAWTC | 2 cut(s) | 233, 1845 |
| PleI | GAGTC | 1 cut(s) | 1807 |
| PpsI | GAGTC | 1 cut(s) | 1807 |
| PscI | ACATGT | 1 cut(s) | 969 |
| PshBI | ATTAAT | 2 cut(s) | 795, 1815 |
| Psp124BI | GAGCTC | 1 cut(s) | 343 |
| Psp6I | CCWGG | 1 cut(s) | 462 |
| PspEI | GGTNACC | 2 cut(s) | 998, 1326 |
| PspFI | CCCAGC | 1 cut(s) | 184 |
| PspGI | CCWGG | 1 cut(s) | 462 |
| PspN4I | GGNNCC | 2 cut(s) | 29, 113 |
| PspPI | GGNCC | 1 cut(s) | 1160 |
| PspXI | VCTCGAGB | 2 cut(s) | 607, 1342 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1756, 1788 |
| PstI | CTGCAG | 2 cut(s) | 315, 1441 |
| PstNI | CAGNNNCTG | 2 cut(s) | 752, 1586 |
| PsuI | RGATCY | 1 cut(s) | 811 |
| PvuII | CAGCTG | 2 cut(s) | 542, 749 |
| RsaI | GTAC | 7 cut(s) | 538, 616, 622, 1348, 1464, 1714, 1765 |
| RsaNI | GTAC | 7 cut(s) | 537, 615, 621, 1347, 1463, 1713, 1764 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1034, 1155 |
| SacI | GAGCTC | 1 cut(s) | 343 |
| SaqAI | TTAA | 6 cut(s) | 777, 795, 1422, 1512, 1749, 1815 |
| Sau3AI | GATC | 9 cut(s) | 544, 628, 646, 669, 734, 757, 811, 981, 1276 |
| Sau96I | GGNCC | 1 cut(s) | 1160 |
| ScaI | AGTACT | 3 cut(s) | 616, 622, 1765 |
| SchI | GAGTC | 1 cut(s) | 1808 |
| ScrFI | CCNGG | 2 cut(s) | 116, 464 |
| SduI | GDGCHC | 1 cut(s) | 343 |
| SfaNI | GCATC | 7 cut(s) | 465, 719, 923, 928, 1070, 1609, 1865 |
| SfcI | CTRYAG | 2 cut(s) | 311, 1437 |
| Sfr274I | CTCGAG | 2 cut(s) | 607, 1342 |
| SinI | GGWCC | 1 cut(s) | 1160 |
| SlaI | CTCGAG | 2 cut(s) | 607, 1342 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1034, 1155 |
| SmlI | CTYRAG | 2 cut(s) | 607, 1342 |
| SmoI | CTYRAG | 2 cut(s) | 607, 1342 |
| SpeI | ACTAGT | 2 cut(s) | 617, 1736 |
| SseBI | AGGCCT | 1 cut(s) | 1101 |
| SspMI | CTAG | 6 cut(s) | 618, 849, 912, 930, 1716, 1737 |
| SstI | GAGCTC | 1 cut(s) | 343 |
| StuI | AGGCCT | 1 cut(s) | 1101 |
| StyD4I | CCNGG | 2 cut(s) | 114, 462 |
| StyI | CCWWGG | 4 cut(s) | 595, 1035, 1150, 1156 |
| TaaI | ACNGT | 7 cut(s) | 559, 949, 1212, 1218, 1235, 1267, 1462 |
| TaiI | ACGT | 1 cut(s) | 1691 |
| TaqI | TCGA | 4 cut(s) | 608, 1196, 1343, 1386 |
| TatI | WGTACW | 5 cut(s) | 536, 614, 620, 1346, 1763 |
| TauI | GCSGC | 4 cut(s) | 809, 847, 1061, 1682 |
| TfiI | GAWTC | 2 cut(s) | 233, 1845 |
| Tru1I | TTAA | 6 cut(s) | 777, 795, 1422, 1512, 1749, 1815 |
| Tru9I | TTAA | 6 cut(s) | 777, 795, 1422, 1512, 1749, 1815 |
| TscAI | CASTG | 2 cut(s) | 954, 1288 |
| TseFI | GTSAC | 3 cut(s) | 1212, 1267, 1739 |
| Tsp45I | GTSAC | 3 cut(s) | 1212, 1267, 1739 |
| TspDTI | ATGAA | 9 cut(s) | 387, 591, 677, 713, 717, 777, 785, 1182, 1499 |
| TspGWI | ACGGA | 1 cut(s) | 1533 |
| TspRI | CASTG | 2 cut(s) | 954, 1288 |
| VpaK11BI | GGWCC | 1 cut(s) | 1160 |
| VspI | ATTAAT | 2 cut(s) | 795, 1815 |
| XapI | RAATTY | 3 cut(s) | 190, 1189, 1567 |
| XceI | RCATGY | 1 cut(s) | 973 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1496 |
| XhoI | CTCGAG | 2 cut(s) | 607, 1342 |
| XspI | CTAG | 6 cut(s) | 618, 849, 912, 930, 1716, 1737 |
| ZrmI | AGTACT | 3 cut(s) | 616, 622, 1765 |
| Zsp2I | ATGCAT | 1 cut(s) | 480 |