WRKY transcription factor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G69810 AT1G69810 |
| fragaria_vesca | FvH4_4g31790 FvH4_4g31790 FvH4_4g31790 |
| malus_domestica | MD13G1077900.v1.1 MD16G1077700.v1.1 |
| prunus_persica | Prupe.1G269200_v2.0.a1 Prupe.1G269200_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0440391 |
| rosa_laevigata | RLG00000006186 |
| rosa_multiflora | Rmu_co8279817.1_g000001 Rmu_co8317961.1_g000001 Rmu_sc0000938.1_g000002 Rmu_sc0001685.1_g000047 |
| rosa_roxburghii | Rroxscaffold_5G00381260 |
| rosa_rugosa | Rorug04G0325900 |
| rosa_samantha | Rh4AG377100 Rh4BG390100 Rh4CG404900 Rh4DG383800 |
| rosa_wichuraiana | Rw4G032290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 266 |
| AccI | GTMKAC | 1 cut(s) | 235 |
| AciI | CCGC | 3 cut(s) | 90, 130, 135 |
| AcyI | GRCGYC | 1 cut(s) | 219 |
| AfaI | GTAC | 2 cut(s) | 125, 176 |
| AgsI | TTSAA | 4 cut(s) | 75, 200, 284, 305 |
| AhlI | ACTAGT | 1 cut(s) | 147 |
| AluBI | AGCT | 1 cut(s) | 81 |
| AluI | AGCT | 1 cut(s) | 81 |
| Alw26I | GTCTC | 1 cut(s) | 21 |
| ApeKI | GCWGC | 1 cut(s) | 87 |
| AseI | ATTAAT | 1 cut(s) | 226 |
| AspLEI | GCGC | 1 cut(s) | 267 |
| AsuHPI | GGTGA | 1 cut(s) | 219 |
| BbvCI | CCTCAGC | 1 cut(s) | 7 |
| BbvI | GCAGC | 1 cut(s) | 99 |
| BccI | CCATC | 1 cut(s) | 248 |
| BcoDI | GTCTC | 1 cut(s) | 21 |
| BcuI | ACTAGT | 1 cut(s) | 147 |
| BfaI | CTAG | 2 cut(s) | 127, 148 |
| BisI | GCNGC | 2 cut(s) | 88, 91 |
| BlsI | GCNGC | 2 cut(s) | 89, 92 |
| BmcAI | AGTACT | 1 cut(s) | 176 |
| BmsI | GCATC | 2 cut(s) | 20, 276 |
| Bpu10I | CCTNAGC | 1 cut(s) | 7 |
| BsaHI | GRCGYC | 1 cut(s) | 219 |
| Bse1I | ACTGG | 1 cut(s) | 231 |
| BseMII | CTCAG | 1 cut(s) | 21 |
| BseNI | ACTGG | 1 cut(s) | 231 |
| BseXI | GCAGC | 1 cut(s) | 99 |
| BsmAI | GTCTC | 1 cut(s) | 21 |
| BspACI | CCGC | 3 cut(s) | 90, 130, 135 |
| BspCNI | CTCAG | 1 cut(s) | 20 |
| BsrI | ACTGG | 1 cut(s) | 231 |
| BssNI | GRCGYC | 1 cut(s) | 219 |
| BstACI | GRCGYC | 1 cut(s) | 219 |
| BstDEI | CTNAG | 2 cut(s) | 7, 67 |
| BstHHI | GCGC | 1 cut(s) | 267 |
| BstMAI | GTCTC | 1 cut(s) | 21 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 48, 87 |
| BstV1I | GCAGC | 1 cut(s) | 99 |
| BtsI | GCAGTG | 1 cut(s) | 37 |
| BtsIMutI | CAGTG | 1 cut(s) | 37 |
| CfoI | GCGC | 1 cut(s) | 267 |
| CseI | GACGC | 1 cut(s) | 227 |
| Csp6I | GTAC | 2 cut(s) | 124, 175 |
| CviJI | RGCY | 4 cut(s) | 36, 81, 191, 277 |
| CviKI_1 | RGCY | 4 cut(s) | 36, 81, 191, 277 |
| CviQI | GTAC | 2 cut(s) | 124, 175 |
| DdeI | CTNAG | 2 cut(s) | 7, 67 |
| FauI | CCCGC | 1 cut(s) | 123 |
| FblI | GTMKAC | 1 cut(s) | 235 |
| Fnu4HI | GCNGC | 2 cut(s) | 88, 91 |
| Fsp4HI | GCNGC | 2 cut(s) | 88, 91 |
| FspAI | RTGCGCAY | 1 cut(s) | 266 |
| FspBI | CTAG | 2 cut(s) | 127, 148 |
| FspI | TGCGCA | 1 cut(s) | 266 |
| GlaI | GCGC | 1 cut(s) | 266 |
| GluI | GCNGC | 2 cut(s) | 88, 91 |
| HgaI | GACGC | 1 cut(s) | 227 |
| HhaI | GCGC | 1 cut(s) | 267 |
| Hin1I | GRCGYC | 1 cut(s) | 219 |
| Hin6I | GCGC | 1 cut(s) | 265 |
| HinP1I | GCGC | 1 cut(s) | 265 |
| HinfI | GANTC | 2 cut(s) | 210, 256 |
| HphI | GGTGA | 1 cut(s) | 219 |
| Hpy166II | GTNNAC | 2 cut(s) | 22, 236 |
| Hpy188I | TCNGA | 1 cut(s) | 141 |
| Hpy8I | GTNNAC | 2 cut(s) | 22, 236 |
| Hpy99I | CGWCG | 1 cut(s) | 299 |
| HpyAV | CCTTC | 1 cut(s) | 245 |
| HpyCH4V | TGCA | 1 cut(s) | 42 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 48, 87 |
| HpyF3I | CTNAG | 2 cut(s) | 7, 67 |
| Hsp92I | GRCGYC | 1 cut(s) | 219 |
| HspAI | GCGC | 1 cut(s) | 265 |
| LpnPI | CCDG | 4 cut(s) | 172, 244, 259, 261 |
| Lsp1109I | GCAGC | 1 cut(s) | 99 |
| LweI | GCATC | 2 cut(s) | 20, 276 |
| MaeI | CTAG | 2 cut(s) | 127, 148 |
| MaeIII | GTNAC | 1 cut(s) | 150 |
| MluCI | AATT | 2 cut(s) | 195, 305 |
| MlyI | GAGTC | 1 cut(s) | 219 |
| MnlI | CCTC | 1 cut(s) | 16 |
| MseI | TTAA | 2 cut(s) | 160, 226 |
| MspA1I | CMGCKG | 1 cut(s) | 90 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 48, 87 |
| NmuCI | GTSAC | 1 cut(s) | 150 |
| NsbI | TGCGCA | 1 cut(s) | 266 |
| PfeI | GAWTC | 1 cut(s) | 256 |
| PkrI | GCNGC | 2 cut(s) | 89, 92 |
| PleI | GAGTC | 1 cut(s) | 218 |
| PpsI | GAGTC | 1 cut(s) | 218 |
| PshBI | ATTAAT | 1 cut(s) | 226 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 167, 199 |
| RsaI | GTAC | 2 cut(s) | 125, 176 |
| RsaNI | GTAC | 2 cut(s) | 124, 175 |
| SaqAI | TTAA | 2 cut(s) | 160, 226 |
| SatI | GCNGC | 2 cut(s) | 88, 91 |
| ScaI | AGTACT | 1 cut(s) | 176 |
| SchI | GAGTC | 1 cut(s) | 219 |
| SetI | ASST | 2 cut(s) | 8, 83 |
| SfaNI | GCATC | 2 cut(s) | 20, 276 |
| SpeI | ACTAGT | 1 cut(s) | 147 |
| Sse9I | AATT | 2 cut(s) | 195, 305 |
| SsiI | CCGC | 3 cut(s) | 90, 130, 135 |
| SspMI | CTAG | 2 cut(s) | 127, 148 |
| TasI | AATT | 2 cut(s) | 195, 305 |
| TatI | WGTACW | 1 cut(s) | 174 |
| TauI | GCSGC | 1 cut(s) | 93 |
| TfiI | GAWTC | 1 cut(s) | 256 |
| Tru1I | TTAA | 2 cut(s) | 160, 226 |
| Tru9I | TTAA | 2 cut(s) | 160, 226 |
| TscAI | CASTG | 1 cut(s) | 44 |
| TseFI | GTSAC | 1 cut(s) | 150 |
| TseI | GCWGC | 1 cut(s) | 87 |
| Tsp45I | GTSAC | 1 cut(s) | 150 |
| TspRI | CASTG | 1 cut(s) | 44 |
| VspI | ATTAAT | 1 cut(s) | 226 |
| XmiI | GTMKAC | 1 cut(s) | 235 |
| XspI | CTAG | 2 cut(s) | 127, 148 |
| ZrmI | AGTACT | 1 cut(s) | 176 |