Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0010817

Physical Location & Seq

Genomic Coordinates Reverse (-)

30796793 .. 30800147

Gene Structure 3355 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G321700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 660 bp

ATGAAGTTCTTGGAATACACCCCGTTGGAACGATTAAATGATTTCTTTAGTCATTTGAATCTCGGAGGGCGAACCATTAATGGTTGTCTTGAAGCTTACTCTTGTAAACACACGGGATCGGATAAGAAATTGTCTCTCAGTTTGGAGAATGAGATTCTTGATTATCTTGGGAAATCTTCGGACACTGACTCTTCCTCACCTGCTGAATTCCTGCTGACCAGATCCAGCCGGAAGACATTGATTTACCTGGTTTTGACACTCTATCACTTGTATCCGGACTATGACTTCAGTGCAGTAAATGCTCACCAGTTCTTCACAGAGGAAAGCTGGGACAGTTTTAAGCAAATGTTCGATACCTATATGTTTGAAGCATCAAAGGAATGGACAGAGACCAATGAGGGCAGTTCCTTGCTGGAAGCTTTGTACAAGGCTTTGGATGAGGTCGTTAGATTAGCAGAATGTGAAGTTTACAGTTACATTCCCGACTCTGACGCTGATCCGTTTCTTGAGAGAGGAGCTGTATGGTCATTCAACTTCTTTTTCTATAATAGAAAACTTAAACGTGTTGTGAGTTTCCGTCTCAGTTGTGAAAGTAACTTGGTGGCTGATGGGCTGTGCTATGAGGAAGATGGAGAAATTTTTGATGGCATGGACATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Maf1

Protein Analysis

220

Amino Acids

25.34

Weight (kDa)

4.52

Isoelectric Point (pI)

36.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0010817)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13240 AT5G13240 AT5G13240
fragaria_vesca	FvH4_4g26160
malus_domestica	MD13G1028600.v1.1 MD16G1031300.v1.1
prunus_persica	Prupe.1G321700_v2.0.a1 Prupe.1G321700_v2.0.a1
pyrus_communis	pycom13g02690 pycom16g02730
rosa_chinensis	RchiOBHm_Chr4g0433731
rosa_multiflora	Rmu_sc0002912.1_g000001 Rmu_sc0006151.1_g000004
rosa_roxburghii	Rroxscaffold_5G00375170
rosa_rugosa	Rorug04G0271300
rosa_samantha	Rh4AG325600 Rh4BG333400 Rh4CG348600 Rh4DG330000
rosa_wichuraiana	Rw4G028200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	208
Acc36I	ACCTGC	1 cut(s)	208
AccIII	TCCGGA	1 cut(s)	274
AclWI	GGATC	3 cut(s)	124, 216, 491
AcsI	RAATTY	2 cut(s)	206, 636
AcuI	CTGAAG	1 cut(s)	271
AfaI	GTAC	1 cut(s)	425
AflIII	ACRYGT	1 cut(s)	562
AgsI	TTSAA	4 cut(s)	58, 92, 368, 532
AjnI	CCWGG	1 cut(s)	246
AluBI	AGCT	4 cut(s)	95, 327, 419, 518
AluI	AGCT	4 cut(s)	95, 327, 419, 518
Alw26I	GTCTC	3 cut(s)	138, 383, 584
AlwI	GGATC	3 cut(s)	124, 216, 491
Aor13HI	TCCGGA	1 cut(s)	274
ApoI	RAATTY	2 cut(s)	206, 636
AseI	ATTAAT	1 cut(s)	78
AsuHPI	GGTGA	2 cut(s)	189, 296
BbsI	GAAGAC	1 cut(s)	239
BccI	CCATC	3 cut(s)	602, 623, 638
BciT130I	CCWGG	1 cut(s)	248
BciVI	GTATCC	1 cut(s)	282
BcoDI	GTCTC	3 cut(s)	138, 383, 584
BfuAI	ACCTGC	1 cut(s)	208
BfuI	GTATCC	1 cut(s)	282
Bme1390I	CCNGG	1 cut(s)	248
BmrFI	CCNGG	1 cut(s)	248
BmsI	GCATC	1 cut(s)	380
BpiI	GAAGAC	1 cut(s)	239
BpuEI	CTTGAG	1 cut(s)	527
BsaI	GGTCTC	1 cut(s)	383
BsaWI	WCCGGW	1 cut(s)	274
Bse1I	ACTGG	1 cut(s)	307
BseAI	TCCGGA	1 cut(s)	274
BseBI	CCWGG	1 cut(s)	248
BseGI	GGATG	1 cut(s)	442
BseMII	CTCAG	2 cut(s)	151, 595
BseNI	ACTGG	1 cut(s)	307
BseRI	GAGGAG	1 cut(s)	528
BseYI	CCCAGC	1 cut(s)	327
BsgI	GTGCAG	1 cut(s)	312
BsiSI	CCGG	2 cut(s)	229, 275
BslFI	GGGAC	1 cut(s)	344
BsmAI	GTCTC	3 cut(s)	138, 383, 584
BsmBI	CGTCTC	1 cut(s)	584
BsmFI	GGGAC	1 cut(s)	344
Bso31I	GGTCTC	1 cut(s)	383
Bsp13I	TCCGGA	1 cut(s)	274
Bsp1407I	TGTACA	1 cut(s)	423
Bsp143I	GATC	3 cut(s)	116, 221, 496
BspCNI	CTCAG	2 cut(s)	150, 594
BspEI	TCCGGA	1 cut(s)	274
BspMI	ACCTGC	1 cut(s)	208
BspPI	GGATC	3 cut(s)	124, 216, 491
BspTNI	GGTCTC	1 cut(s)	383
BsrGI	TGTACA	1 cut(s)	423
BsrI	ACTGG	1 cut(s)	307
BssMI	GATC	3 cut(s)	116, 221, 496
Bst2UI	CCWGG	1 cut(s)	248
Bst4CI	ACNGT	2 cut(s)	335, 473
Bst6I	CTCTTC	1 cut(s)	196
BstAPI	GCANNNNNTGC	1 cut(s)	299
BstAUI	TGTACA	1 cut(s)	423
BstDEI	CTNAG	2 cut(s)	137, 581
BstF5I	GGATG	1 cut(s)	442
BstKTI	GATC	3 cut(s)	119, 224, 499
BstMAI	GTCTC	3 cut(s)	138, 383, 584
BstMBI	GATC	3 cut(s)	116, 221, 496
BstMWI	GCNNNNNNNGC	1 cut(s)	299
BstNI	CCWGG	1 cut(s)	248
BstSCI	CCNGG	1 cut(s)	246
BstV2I	GAAGAC	1 cut(s)	239
BstX2I	RGATCY	1 cut(s)	221
BstYI	RGATCY	1 cut(s)	221
BsuI	GTATCC	1 cut(s)	282
BtsCI	GGATG	1 cut(s)	442
BtsIMutI	CAGTG	2 cut(s)	183, 295
BveI	ACCTGC	1 cut(s)	208
CseI	GACGC	1 cut(s)	500
CsiI	ACCWGGT	1 cut(s)	246
Csp6I	GTAC	1 cut(s)	424
CviAII	CATG	1 cut(s)	649
CviJI	RGCY	8 cut(s)	95, 228, 327, 419, 431, 518, 605, 613
CviKI_1	RGCY	8 cut(s)	95, 228, 327, 419, 431, 518, 605, 613
CviQI	GTAC	1 cut(s)	424
DdeI	CTNAG	2 cut(s)	137, 581
DpnI	GATC	3 cut(s)	118, 223, 498
DpnII	GATC	3 cut(s)	116, 221, 496
Eam1104I	CTCTTC	1 cut(s)	196
EarI	CTCTTC	1 cut(s)	196
Eco31I	GGTCTC	1 cut(s)	383
Eco57I	CTGAAG	1 cut(s)	271
EcoRI	GAATTC	1 cut(s)	206
EcoRII	CCWGG	1 cut(s)	246
Esp3I	CGTCTC	1 cut(s)	584
FaeI	CATG	1 cut(s)	652
FaiI	YATR	7 cut(s)	282, 360, 362, 523, 546, 621, 650
FaqI	GGGAC	1 cut(s)	344
FatI	CATG	1 cut(s)	648
FokI	GGATG	1 cut(s)	449
GsaI	CCCAGC	1 cut(s)	331
HapII	CCGG	2 cut(s)	229, 275
HgaI	GACGC	1 cut(s)	500
Hin1II	CATG	1 cut(s)	652
HindIII	AAGCTT	2 cut(s)	93, 417
HinfI	GANTC	4 cut(s)	58, 154, 188, 485
HpaII	CCGG	2 cut(s)	229, 275
HphI	GGTGA	2 cut(s)	189, 296
Hpy166II	GTNNAC	2 cut(s)	107, 469
Hpy188I	TCNGA	4 cut(s)	65, 121, 181, 490
Hpy188III	TCNNGA	5 cut(s)	89, 158, 275, 482, 506
Hpy8I	GTNNAC	2 cut(s)	107, 469
HpyCH4III	ACNGT	2 cut(s)	335, 473
HpyCH4IV	ACGT	1 cut(s)	562
HpyCH4V	TGCA	1 cut(s)	293
HpyF10VI	GCNNNNNNNGC	1 cut(s)	299
HpyF3I	CTNAG	2 cut(s)	137, 581
HpySE526I	ACGT	1 cut(s)	562
Hsp92II	CATG	1 cut(s)	652
Kpn2I	TCCGGA	1 cut(s)	274
Kzo9I	GATC	3 cut(s)	116, 221, 496
LmnI	GCTCC	1 cut(s)	515
LweI	GCATC	1 cut(s)	380
MabI	ACCWGGT	1 cut(s)	246
MaeII	ACGT	1 cut(s)	562
MaeIII	GTNAC	2 cut(s)	473, 593
MalI	GATC	3 cut(s)	118, 223, 498
MboI	GATC	3 cut(s)	116, 221, 496
MboII	GAAGA	5 cut(s)	168, 183, 244, 304, 638
MflI	RGATCY	1 cut(s)	221
MluCI	AATT	3 cut(s)	128, 206, 636
MlyI	GAGTC	2 cut(s)	182, 479
MmeI	TCCRAC	1 cut(s)	6
MnlI	CCTC	7 cut(s)	59, 205, 313, 391, 433, 506, 616
MroI	TCCGGA	1 cut(s)	274
MseI	TTAA	4 cut(s)	35, 78, 339, 558
MspI	CCGG	2 cut(s)	229, 275
MspR9I	CCNGG	1 cut(s)	248
MvaI	CCWGG	1 cut(s)	248
MwoI	GCNNNNNNNGC	1 cut(s)	299
NdeII	GATC	3 cut(s)	116, 221, 496
NlaIII	CATG	1 cut(s)	652
PaqCI	CACCTGC	1 cut(s)	208
PfeI	GAWTC	2 cut(s)	58, 154
PleI	GAGTC	2 cut(s)	182, 479
PpsI	GAGTC	2 cut(s)	182, 479
PshBI	ATTAAT	1 cut(s)	78
Psp6I	CCWGG	1 cut(s)	246
PspFI	CCCAGC	1 cut(s)	327
PspGI	CCWGG	1 cut(s)	246
PsuI	RGATCY	1 cut(s)	221
RsaI	GTAC	1 cut(s)	425
RsaNI	GTAC	1 cut(s)	424
SaqAI	TTAA	4 cut(s)	35, 78, 339, 558
Sau3AI	GATC	3 cut(s)	116, 221, 496
SchI	GAGTC	2 cut(s)	182, 479
ScrFI	CCNGG	1 cut(s)	248
SetI	ASST	9 cut(s)	97, 202, 249, 329, 359, 421, 444, 520, 565
SexAI	ACCWGGT	1 cut(s)	246
SfaNI	GCATC	1 cut(s)	380
SmlI	CTYRAG	1 cut(s)	506
SmoI	CTYRAG	1 cut(s)	506
Sse9I	AATT	3 cut(s)	128, 206, 636
StyD4I	CCNGG	1 cut(s)	246
TaaI	ACNGT	2 cut(s)	335, 473
TaiI	ACGT	1 cut(s)	565
TaqI	TCGA	1 cut(s)	351
TasI	AATT	3 cut(s)	128, 206, 636
TatI	WGTACW	1 cut(s)	423
TfiI	GAWTC	2 cut(s)	58, 154
Tru1I	TTAA	4 cut(s)	35, 78, 339, 558
Tru9I	TTAA	4 cut(s)	35, 78, 339, 558
TscAI	CASTG	2 cut(s)	190, 295
TspDTI	ATGAA	1 cut(s)	17
TspGWI	ACGGA	2 cut(s)	489, 566
TspRI	CASTG	2 cut(s)	190, 295
VspI	ATTAAT	1 cut(s)	78
XapI	RAATTY	2 cut(s)	206, 636

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.