Photosystem II stability assembly factor HCF136
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G23120 AT5G23120 |
| fragaria_vesca | FvH4_4g36890 FvH4_4g36890 |
| malus_domestica | MD00G1043400.v1.1 MD13G1005900.v1.1 MD15G1106700.v1.1 MD16G1002000.v1.1 |
| prunus_persica | Prupe.1G347100_v2.0.a1 |
| pyrus_communis | pycom13g00490 pycom16g00370 |
| rosa_chinensis | RchiOBHm_Chr4g0446671 |
| rosa_laevigata | RLG00000005641 |
| rosa_multiflora | Rmu_sc0001753.1_g000042 Rmu_sc0001753.1_g000043 |
| rosa_roxburghii | Rroxscaffold_5G00387030 |
| rosa_rugosa | Rorug04G0373600 |
| rosa_samantha | Rh4AG435000 Rh4BG444000 Rh4CG461300 Rh4DG442800 |
| rosa_wichuraiana | Rw4G037190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 37 |
| Acc36I | ACCTGC | 1 cut(s) | 529 |
| Acc65I | GGTACC | 1 cut(s) | 1050 |
| AccB1I | GGYRCC | 1 cut(s) | 1050 |
| AccBSI | CCGCTC | 1 cut(s) | 795 |
| AciI | CCGC | 5 cut(s) | 203, 273, 572, 753, 793 |
| AclWI | GGATC | 2 cut(s) | 237, 250 |
| AcoI | YGGCCR | 2 cut(s) | 255, 859 |
| AcsI | RAATTY | 3 cut(s) | 74, 903, 1178 |
| AcuI | CTGAAG | 1 cut(s) | 468 |
| AfaI | GTAC | 3 cut(s) | 982, 1052, 1195 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 239, 362, 1024, 1060 |
| AgsI | TTSAA | 8 cut(s) | 74, 127, 435, 463, 475, 490, 908, 1004 |
| AjnI | CCWGG | 3 cut(s) | 380, 589, 856 |
| Alw26I | GTCTC | 6 cut(s) | 191, 216, 392, 408, 701, 826 |
| AlwI | GGATC | 2 cut(s) | 237, 250 |
| Ama87I | CYCGRG | 1 cut(s) | 347 |
| AoxI | GGCC | 2 cut(s) | 255, 859 |
| ApeKI | GCWGC | 5 cut(s) | 695, 874, 1076, 1142, 1157 |
| ApoI | RAATTY | 3 cut(s) | 74, 903, 1178 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 323, 355 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 736, 1008 |
| Asp718I | GGTACC | 1 cut(s) | 1050 |
| AspLEI | GCGC | 1 cut(s) | 208 |
| AspS9I | GGNCC | 3 cut(s) | 352, 378, 1128 |
| AsuC2I | CCSGG | 2 cut(s) | 315, 1025 |
| AsuHPI | GGTGA | 4 cut(s) | 70, 184, 632, 652 |
| AvaI | CYCGRG | 1 cut(s) | 347 |
| AvaII | GGWCC | 3 cut(s) | 352, 378, 1128 |
| BaeGI | GKGCMC | 1 cut(s) | 348 |
| BalI | TGGCCA | 1 cut(s) | 861 |
| BamHI | GGATCC | 1 cut(s) | 242 |
| BanI | GGYRCC | 1 cut(s) | 1050 |
| BbsI | GAAGAC | 1 cut(s) | 456 |
| BbvI | GCAGC | 5 cut(s) | 682, 886, 1088, 1154, 1169 |
| BccI | CCATC | 5 cut(s) | 401, 631, 797, 923, 1211 |
| BceAI | ACGGC | 2 cut(s) | 217, 813 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 35 |
| BciT130I | CCWGG | 3 cut(s) | 382, 591, 858 |
| BciVI | GTATCC | 1 cut(s) | 561 |
| BcnI | CCSGG | 2 cut(s) | 315, 1025 |
| BcoDI | GTCTC | 6 cut(s) | 191, 216, 392, 408, 701, 826 |
| BfaI | CTAG | 2 cut(s) | 138, 741 |
| BfmI | CTRYAG | 1 cut(s) | 466 |
| BfoI | RGCGCY | 1 cut(s) | 209 |
| BfuAI | ACCTGC | 1 cut(s) | 529 |
| BfuI | GTATCC | 1 cut(s) | 561 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 871 |
| BisI | GCNGC | 6 cut(s) | 204, 696, 875, 1077, 1143, 1158 |
| BlpI | GCTNAGC | 1 cut(s) | 575 |
| BlsI | GCNGC | 6 cut(s) | 205, 697, 876, 1078, 1144, 1159 |
| Bme1390I | CCNGG | 5 cut(s) | 315, 382, 591, 858, 1025 |
| Bme18I | GGWCC | 3 cut(s) | 352, 378, 1128 |
| BmeT110I | CYCGRG | 1 cut(s) | 347 |
| BmgT120I | GGNCC | 3 cut(s) | 352, 378, 1128 |
| BmiI | GGNNCC | 7 cut(s) | 244, 354, 379, 426, 855, 1052, 1130 |
| BmrFI | CCNGG | 5 cut(s) | 315, 382, 591, 858, 1025 |
| BpiI | GAAGAC | 1 cut(s) | 456 |
| BpmI | CTGGAG | 1 cut(s) | 612 |
| Bpu10I | CCTNAGC | 1 cut(s) | 357 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 575 |
| BpuEI | CTTGAG | 1 cut(s) | 808 |
| BpuMI | CCSGG | 2 cut(s) | 315, 1025 |
| Bsa29I | ATCGAT | 1 cut(s) | 1185 |
| BsaJI | CCNNGG | 4 cut(s) | 313, 348, 829, 1024 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 281, 311, 585, 615 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 239, 362, 1024, 1060 |
| Bse118I | RCCGGY | 1 cut(s) | 253 |
| Bse1I | ACTGG | 3 cut(s) | 622, 692, 1013 |
| Bse3DI | GCAATG | 3 cut(s) | 94, 333, 1152 |
| BseBI | CCWGG | 3 cut(s) | 382, 591, 858 |
| BseCI | ATCGAT | 1 cut(s) | 1185 |
| BseDI | CCNNGG | 4 cut(s) | 313, 348, 829, 1024 |
| BseGI | GGATG | 2 cut(s) | 412, 1069 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 239, 362, 1024, 1060 |
| BseMI | GCAATG | 3 cut(s) | 94, 333, 1152 |
| BseMII | CTCAG | 2 cut(s) | 596, 962 |
| BseNI | ACTGG | 3 cut(s) | 622, 692, 1013 |
| BseRI | GAGGAG | 3 cut(s) | 78, 972, 1010 |
| BseSI | GKGCMC | 1 cut(s) | 348 |
| BseXI | GCAGC | 5 cut(s) | 682, 886, 1088, 1154, 1169 |
| BseYI | CCCAGC | 3 cut(s) | 558, 1079, 1207 |
| BsgI | GTGCAG | 1 cut(s) | 651 |
| BshFI | GGCC | 2 cut(s) | 257, 861 |
| BshNI | GGYRCC | 1 cut(s) | 1050 |
| BshVI | ATCGAT | 1 cut(s) | 1185 |
| BsiHKCI | CYCGRG | 1 cut(s) | 347 |
| BsiSI | CCGG | 3 cut(s) | 254, 315, 1024 |
| BslFI | GGGAC | 2 cut(s) | 283, 391 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 239, 362, 1024, 1060 |
| BsmAI | GTCTC | 6 cut(s) | 191, 216, 392, 408, 701, 826 |
| BsmFI | GGGAC | 2 cut(s) | 283, 391 |
| BsmI | GAATGC | 1 cut(s) | 1035 |
| BsnI | GGCC | 2 cut(s) | 257, 861 |
| BsoBI | CYCGRG | 1 cut(s) | 347 |
| Bsp1286I | GDGCHC | 1 cut(s) | 348 |
| Bsp143I | GATC | 2 cut(s) | 242, 1055 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 575 |
| BspACI | CCGC | 5 cut(s) | 203, 273, 572, 753, 793 |
| BspANI | GGCC | 2 cut(s) | 257, 861 |
| BspCNI | CTCAG | 2 cut(s) | 595, 963 |
| BspDI | ATCGAT | 1 cut(s) | 1185 |
| BspLI | GGNNCC | 7 cut(s) | 244, 354, 379, 426, 855, 1052, 1130 |
| BspMI | ACCTGC | 1 cut(s) | 529 |
| BspPI | GGATC | 2 cut(s) | 237, 250 |
| BspT107I | GGYRCC | 1 cut(s) | 1050 |
| BsrBI | CCGCTC | 1 cut(s) | 795 |
| BsrDI | GCAATG | 3 cut(s) | 94, 333, 1152 |
| BsrFI | RCCGGY | 1 cut(s) | 253 |
| BsrI | ACTGG | 3 cut(s) | 622, 692, 1013 |
| BssAI | RCCGGY | 1 cut(s) | 253 |
| BssECI | CCNNGG | 4 cut(s) | 313, 348, 829, 1024 |
| BssMI | GATC | 2 cut(s) | 242, 1055 |
| Bst2UI | CCWGG | 3 cut(s) | 382, 591, 858 |
| Bst4CI | ACNGT | 5 cut(s) | 365, 712, 736, 892, 1193 |
| Bst6I | CTCTTC | 4 cut(s) | 154, 160, 261, 620 |
| BstC8I | GCNNGC | 3 cut(s) | 82, 797, 863 |
| BstDEI | CTNAG | 4 cut(s) | 357, 575, 582, 971 |
| BstDSI | CCRYGG | 1 cut(s) | 829 |
| BstF5I | GGATG | 2 cut(s) | 412, 1069 |
| BstH2I | RGCGCY | 1 cut(s) | 209 |
| BstHHI | GCGC | 1 cut(s) | 208 |
| BstKTI | GATC | 2 cut(s) | 245, 1058 |
| BstMAI | GTCTC | 6 cut(s) | 191, 216, 392, 408, 701, 826 |
| BstMBI | GATC | 2 cut(s) | 242, 1055 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 862, 871, 1076 |
| BstNI | CCWGG | 3 cut(s) | 382, 591, 858 |
| BstSCI | CCNGG | 5 cut(s) | 313, 380, 589, 856, 1023 |
| BstSFI | CTRYAG | 1 cut(s) | 466 |
| BstSLI | GKGCMC | 1 cut(s) | 348 |
| BstV1I | GCAGC | 5 cut(s) | 682, 886, 1088, 1154, 1169 |
| BstV2I | GAAGAC | 1 cut(s) | 456 |
| BstX2I | RGATCY | 1 cut(s) | 242 |
| BstYI | RGATCY | 1 cut(s) | 242 |
| Bsu15I | ATCGAT | 1 cut(s) | 1185 |
| BsuI | GTATCC | 1 cut(s) | 561 |
| BsuRI | GGCC | 2 cut(s) | 257, 861 |
| BsuTUI | ATCGAT | 1 cut(s) | 1185 |
| BtgI | CCRYGG | 1 cut(s) | 829 |
| BtsCI | GGATG | 2 cut(s) | 412, 1069 |
| BtsIMutI | CAGTG | 1 cut(s) | 792 |
| BveI | ACCTGC | 1 cut(s) | 529 |
| Cac8I | GCNNGC | 3 cut(s) | 82, 797, 863 |
| CfoI | GCGC | 1 cut(s) | 208 |
| Cfr10I | RCCGGY | 1 cut(s) | 253 |
| Cfr13I | GGNCC | 3 cut(s) | 352, 378, 1128 |
| ClaI | ATCGAT | 1 cut(s) | 1185 |
| Csp6I | GTAC | 3 cut(s) | 981, 1051, 1194 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 36, 71 |
| CviAII | CATG | 2 cut(s) | 913, 1125 |
| CviQI | GTAC | 3 cut(s) | 981, 1051, 1194 |
| DdeI | CTNAG | 4 cut(s) | 357, 575, 582, 971 |
| DpnI | GATC | 2 cut(s) | 244, 1057 |
| DpnII | GATC | 2 cut(s) | 242, 1055 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 37 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 37 |
| EaeI | YGGCCR | 2 cut(s) | 255, 859 |
| Eam1104I | CTCTTC | 4 cut(s) | 154, 160, 261, 620 |
| EarI | CTCTTC | 4 cut(s) | 154, 160, 261, 620 |
| EciI | GGCGGA | 1 cut(s) | 262 |
| Eco47I | GGWCC | 3 cut(s) | 352, 378, 1128 |
| Eco57I | CTGAAG | 1 cut(s) | 468 |
| Eco88I | CYCGRG | 1 cut(s) | 347 |
| EcoO109I | RGGNCCY | 1 cut(s) | 352 |
| EcoRI | GAATTC | 2 cut(s) | 74, 903 |
| EcoRII | CCWGG | 3 cut(s) | 380, 589, 856 |
| FaeI | CATG | 2 cut(s) | 916, 1128 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 285, 317 |
| FaqI | GGGAC | 2 cut(s) | 283, 391 |
| FatI | CATG | 2 cut(s) | 912, 1124 |
| Fnu4HI | GCNGC | 6 cut(s) | 204, 696, 875, 1077, 1143, 1158 |
| FokI | GGATG | 2 cut(s) | 419, 1076 |
| Fsp4HI | GCNGC | 6 cut(s) | 204, 696, 875, 1077, 1143, 1158 |
| FspBI | CTAG | 2 cut(s) | 138, 741 |
| GlaI | GCGC | 1 cut(s) | 207 |
| GluI | GCNGC | 6 cut(s) | 204, 696, 875, 1077, 1143, 1158 |
| GsaI | CCCAGC | 3 cut(s) | 562, 1083, 1211 |
| GsuI | CTGGAG | 1 cut(s) | 612 |
| HaeII | RGCGCY | 1 cut(s) | 209 |
| HaeIII | GGCC | 2 cut(s) | 257, 861 |
| HapII | CCGG | 3 cut(s) | 254, 315, 1024 |
| HhaI | GCGC | 1 cut(s) | 208 |
| Hin1II | CATG | 2 cut(s) | 916, 1128 |
| Hin6I | GCGC | 1 cut(s) | 206 |
| HinP1I | GCGC | 1 cut(s) | 206 |
| HincII | GTYRAC | 1 cut(s) | 990 |
| HindII | GTYRAC | 1 cut(s) | 990 |
| HindIII | AAGCTT | 1 cut(s) | 1068 |
| HinfI | GANTC | 5 cut(s) | 161, 175, 269, 471, 545 |
| HpaI | GTTAAC | 1 cut(s) | 990 |
| HpaII | CCGG | 3 cut(s) | 254, 315, 1024 |
| HphI | GGTGA | 4 cut(s) | 70, 184, 632, 652 |
| Hpy166II | GTNNAC | 2 cut(s) | 790, 990 |
| Hpy188I | TCNGA | 7 cut(s) | 160, 196, 216, 265, 283, 544, 972 |
| Hpy188III | TCNNGA | 5 cut(s) | 71, 329, 549, 704, 1040 |
| Hpy8I | GTNNAC | 2 cut(s) | 790, 990 |
| Hpy99I | CGWCG | 1 cut(s) | 34 |
| HpyAV | CCTTC | 5 cut(s) | 311, 335, 490, 644, 685 |
| HpyCH4III | ACNGT | 5 cut(s) | 365, 712, 736, 892, 1193 |
| HpyCH4IV | ACGT | 1 cut(s) | 430 |
| HpyCH4V | TGCA | 8 cut(s) | 22, 524, 535, 632, 656, 758, 896, 1157 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 862, 871, 1076 |
| HpyF3I | CTNAG | 4 cut(s) | 357, 575, 582, 971 |
| HpySE526I | ACGT | 1 cut(s) | 430 |
| Hsp92II | CATG | 2 cut(s) | 916, 1128 |
| HspAI | GCGC | 1 cut(s) | 206 |
| KpnI | GGTACC | 1 cut(s) | 1054 |
| KspAI | GTTAAC | 1 cut(s) | 990 |
| Kzo9I | GATC | 2 cut(s) | 242, 1055 |
| LmnI | GCTCC | 1 cut(s) | 853 |
| Lsp1109I | GCAGC | 5 cut(s) | 682, 886, 1088, 1154, 1169 |
| MaeI | CTAG | 2 cut(s) | 138, 741 |
| MaeII | ACGT | 1 cut(s) | 430 |
| MaeIII | GTNAC | 4 cut(s) | 640, 761, 833, 1133 |
| MalI | GATC | 2 cut(s) | 244, 1057 |
| MbiI | CCGCTC | 1 cut(s) | 795 |
| MboI | GATC | 2 cut(s) | 242, 1055 |
| MboII | GAAGA | 9 cut(s) | 141, 147, 156, 278, 461, 467, 637, 912, 1016 |
| MflI | RGATCY | 1 cut(s) | 242 |
| MhlI | GDGCHC | 1 cut(s) | 348 |
| MlsI | TGGCCA | 1 cut(s) | 861 |
| MluCI | AATT | 9 cut(s) | 51, 74, 435, 475, 525, 657, 781, 903, 1178 |
| MluNI | TGGCCA | 1 cut(s) | 861 |
| MlyI | GAGTC | 2 cut(s) | 184, 278 |
| MmeI | TCCRAC | 4 cut(s) | 243, 485, 493, 899 |
| Mox20I | TGGCCA | 1 cut(s) | 861 |
| MroXI | GAANNNNTTC | 2 cut(s) | 736, 1008 |
| MscI | TGGCCA | 1 cut(s) | 861 |
| MseI | TTAA | 3 cut(s) | 726, 780, 989 |
| Msp20I | TGGCCA | 1 cut(s) | 861 |
| MspA1I | CMGCKG | 4 cut(s) | 446, 558, 1079, 1145 |
| MspI | CCGG | 3 cut(s) | 254, 315, 1024 |
| MspR9I | CCNGG | 5 cut(s) | 315, 382, 591, 858, 1025 |
| Mva1269I | GAATGC | 1 cut(s) | 1035 |
| MvaI | CCWGG | 3 cut(s) | 382, 591, 858 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 862, 871, 1076 |
| NciI | CCSGG | 2 cut(s) | 315, 1025 |
| NdeII | GATC | 2 cut(s) | 242, 1055 |
| NlaIII | CATG | 2 cut(s) | 916, 1128 |
| NlaIV | GGNNCC | 7 cut(s) | 244, 354, 379, 426, 855, 1052, 1130 |
| NmuCI | GTSAC | 2 cut(s) | 640, 1133 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 97, 315 |
| PctI | GAATGC | 1 cut(s) | 1035 |
| PdmI | GAANNNNTTC | 2 cut(s) | 736, 1008 |
| PfeI | GAWTC | 3 cut(s) | 161, 471, 545 |
| PfoI | TCCNGGA | 1 cut(s) | 589 |
| PkrI | GCNGC | 6 cut(s) | 205, 697, 876, 1078, 1144, 1159 |
| PleI | GAGTC | 2 cut(s) | 183, 277 |
| PpsI | GAGTC | 2 cut(s) | 183, 277 |
| PpuMI | RGGWCCY | 1 cut(s) | 352 |
| Psp5II | RGGWCCY | 1 cut(s) | 352 |
| Psp6I | CCWGG | 3 cut(s) | 380, 589, 856 |
| PspFI | CCCAGC | 3 cut(s) | 558, 1079, 1207 |
| PspGI | CCWGG | 3 cut(s) | 380, 589, 856 |
| PspN4I | GGNNCC | 7 cut(s) | 244, 354, 379, 426, 855, 1052, 1130 |
| PspPI | GGNCC | 3 cut(s) | 352, 378, 1128 |
| PspPPI | RGGWCCY | 1 cut(s) | 352 |
| PsuI | RGATCY | 1 cut(s) | 242 |
| PvuII | CAGCTG | 4 cut(s) | 446, 558, 1079, 1145 |
| RsaI | GTAC | 3 cut(s) | 982, 1052, 1195 |
| RsaNI | GTAC | 3 cut(s) | 981, 1051, 1194 |
| SaqAI | TTAA | 3 cut(s) | 726, 780, 989 |
| SatI | GCNGC | 6 cut(s) | 204, 696, 875, 1077, 1143, 1158 |
| Sau3AI | GATC | 2 cut(s) | 242, 1055 |
| Sau96I | GGNCC | 3 cut(s) | 352, 378, 1128 |
| SchI | GAGTC | 2 cut(s) | 184, 278 |
| ScrFI | CCNGG | 5 cut(s) | 315, 382, 591, 858, 1025 |
| SduI | GDGCHC | 1 cut(s) | 348 |
| SfcI | CTRYAG | 1 cut(s) | 466 |
| SinI | GGWCC | 3 cut(s) | 352, 378, 1128 |
| SmlI | CTYRAG | 1 cut(s) | 823 |
| SmoI | CTYRAG | 1 cut(s) | 823 |
| Sse9I | AATT | 9 cut(s) | 51, 74, 435, 475, 525, 657, 781, 903, 1178 |
| SsiI | CCGC | 5 cut(s) | 203, 273, 572, 753, 793 |
| SspI | AATATT | 1 cut(s) | 133 |
| SspMI | CTAG | 2 cut(s) | 138, 741 |
| StyD4I | CCNGG | 5 cut(s) | 313, 380, 589, 856, 1023 |
| TaaI | ACNGT | 5 cut(s) | 365, 712, 736, 892, 1193 |
| TaiI | ACGT | 1 cut(s) | 433 |
| TaqI | TCGA | 3 cut(s) | 309, 330, 1185 |
| TasI | AATT | 9 cut(s) | 51, 74, 435, 475, 525, 657, 781, 903, 1178 |
| TatI | WGTACW | 1 cut(s) | 1193 |
| TauI | GCSGC | 1 cut(s) | 206 |
| TfiI | GAWTC | 3 cut(s) | 161, 471, 545 |
| Tru1I | TTAA | 3 cut(s) | 726, 780, 989 |
| Tru9I | TTAA | 3 cut(s) | 726, 780, 989 |
| TscAI | CASTG | 1 cut(s) | 792 |
| TseFI | GTSAC | 2 cut(s) | 640, 1133 |
| TseI | GCWGC | 5 cut(s) | 695, 874, 1076, 1142, 1157 |
| Tsp45I | GTSAC | 2 cut(s) | 640, 1133 |
| TspDTI | ATGAA | 2 cut(s) | 17, 1080 |
| TspGWI | ACGGA | 2 cut(s) | 47, 429 |
| TspRI | CASTG | 1 cut(s) | 792 |
| VpaK11BI | GGWCC | 3 cut(s) | 352, 378, 1128 |
| XapI | RAATTY | 3 cut(s) | 74, 903, 1178 |
| XmnI | GAANNNNTTC | 2 cut(s) | 736, 1008 |
| XspI | CTAG | 2 cut(s) | 138, 741 |