Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0013627

Physical Location & Seq

Genomic Coordinates Forward (+)

32899176 .. 32905305

Gene Structure 6130 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G354000.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2496 bp

ATGTTGGGTTCTTTGGTTCTTCATCATCCCAATCCTGCTGCTGCTGCTGCTCTTGGATCCTTAACCAGCAACAACTACCTGAGACTGAGGGCCTTGAAGATTAATCGACACTCTGGCAAAAAGCAAGCACCACCAGTAACCTTTGGATCTCAAAACTCATCGCTTGGGTACCGCAGACTTGTTTCCCCGTCAACAAGTTCAATATGTGCCGCGGTGGGGGAGGATAGTTTCAAAAGTTCAGCTGTTTTCACAGACGACAGCTCCGCAGTGACAATGACTGATGAAGAGATGGAAAGTATTGGAATCTTGAGCATCGATCAAGCCTTGGAACCATACAAGGAGCACTTCAAGTATAGAATAAAGAAATATGTGGATCAGAAAGGGCTTATTGAGACATATGAAGGAGGTCTAGAGGAATTTGCTCAAGGTTATGTGAAATTTGGATTTAACAGAGAAGAAGATGGAATTGTGTACCGTGAATGGGCTCCTGCTGCTCAGGAGGCACAGCTTATTGGGGACTTTAATGGATGGGATGGCTCCAAACACAAGATGGAGAAAAACCAATATGGGGTTTGGAGTATCAAGATACCAAATTCTGGTGGAAATTCAGCCATTCCTCACAATTCAAGGGTTAAATTCCGGTTCAAGCATGGAAATGAAGTTTGGGTTGATCGTATCCCTGCTTGGATTAAATATGCCACCGTGGACCCAGCCAGGTTCGCAGCACCATATGATGGTGTGTACTGGGATCCACCACCATCAGAAAGGTTTCAGTTTAAGCATCCTCATCCTCCAAAACCCAAAGCTCCGCGAATATATGAGGCTCATGTTGGAATGAGTAGCTCAGAACCCCAGATCAGTTCATACAGAGAATTTGCTGATGATGTTTTGCCTCGTATCCGAGCAAATAACTATAACACAGTCCAGTTGATGGCTGTGATGGAGCATTCCTATTATGCATCATTCGGCTATCATGTGACAAACTTCTTTGCCGTAAGCAGTAGATCTGGAACACCTGAGGACCTTAAATATCTAATTGATAAAGCCCATTGTCTAGGCCTGCGGGTATTGATGGATGTTGTTCACAGCCATGCAAGTAACAACGTTACTGATGGCCTCAATGGCTTTGAAGTTGGTCAAAGCTCACAAGAGTCCTACTTCCACACAGGGGATAGAGGCTACCATAAGTTATGGGATAGCCGACTTTTCAACTATTCTAATTGGGAAGTTCTCCGCTTCCTTTTATCCAACTTGAGGTGGTGGCTGGAGGAGTTTAAATTTGATGGGTTTCGATTTGATGGAGTAACTTCAATGTTATATCATCACCATGGGATAAACATGGCATTTACAGGGGATTATCATGAGTATTTTAGTGAGGCAACAGATGTTGATGCTGTGGTTTATTTGATGCTTGCCAACTATCTGATCCATAAGATTTTGCCAGATGCAACTGTAATTGCTGAAGATGTTTCTGGTATGCCTGGACTTGGTCGGCCTGTCTCTGAAGGTGGTATTGGTTTTGATTACCGGCTGGCAATGGCCATCCCTGACAAATGGATTGATTACCTGAAAAACAAGAATGATGAAGAGTGGTCAATGAACGAAATTTCATGCAGCTTGACAAATAGGAGATACACTGAGAAGTGTATCTCCTATGCGGAGAGTCATGACCAGGCAATTGTGGGTGACAAGACAATTGCGTTCTTTTTGATGGATAGAGAAATGTATTCTGGCATGTCTTGCTTAACTGATGCTTCTCCTACTATTGAGCGAGGGATAGCGCTTCACAAGATGATACATTTTCTAACTATGGCATTAGGAGGTGAGGGCTACCTTAATTTTATGGGAAATGAGTTTGGCCATCCTGAATGGGTCGACTTTCCAAGAGAAGGCAATGGGTGGAGTTATGAAAAGTGCAGACGCCAATGGAACCTGGTGGATACAGATCACTTGAGATATAAGTTTATGAATGCATTTGACAGAGCTATGAATTTGCTTGATGAAAAATTTTCATTCCTGTCATCGACACAGCAGATAGTGAGTAGCACAAATGAAGAAGACAAGGTTATTGTCTTTGAGCGTGGAGATTTAGTTTTTGTGTTCAATTTTCATCCAGAAAACACATATGATGGGTATAAAGTTGGGTGTGACTTACCTGGGAAGTACAGAGTTGCACTAGATAGTGATGCTTATGAGTTTGGTGGACATGGAAGAGTAGGCCATGATGTTGACCACTTCACATTCCCAGAAGGAATACCAGGGGTTCCTGAAACTAATTTTAACAACCGTCCCAACTCCTTCAAAGTACTCTCACCGGCTCACACATGCGTGGTTTATTATCGAGTGGATGAAAGTCTGGAGGCAGATGTGGATGAGACATCAATAGCAGAAGTTGTGGTTGGGAAGGAGAATTTTGAAGAGTTGGGTTCCGTGATAGATGATGGCAATGTTGGTCCAAGAGCAGAAAAGAGTGGCGAAGGGTCATCAGATGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003844 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0006073 GO:0008150 GO:0008152 GO:0009501 GO:0009507 GO:0009536 GO:0009987 GO:0016740 GO:0016757 GO:0016758 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 map00500 map01100 map01110

Pfam Domains

Protein Families

Alpha-amylase Alpha-amylase_C CBM_48

Protein Analysis

832

Amino Acids

94.08

Weight (kDa)

5.36

Isoelectric Point (pI)

30.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013627)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g37381 FvH4_2g37410
malus_domestica	MD08G1002300.v1.1
prunus_persica	Prupe.1G354000_v2.0.a1 Prupe.1G354000_v2.0.a1 Prupe.1G354000_v2.0.a1
pyrus_communis	pycom08g00150
rosa_chinensis	RchiOBHm_Chr6g0304311
rosa_laevigata	RLG00000010992
rosa_multiflora	Rmu_ssc0000218.1_g000037
rosa_roxburghii	Rroxscaffold_7G00163850
rosa_rugosa	Rorug06G0329900 Rorug06G0330000
rosa_samantha	Rh6AG443300 Rh6BG459100 Rh6CG456100 Rh6DG442800
rosa_wichuraiana	Rw6G038470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	168
AccB1I	GGYRCC	1 cut(s)	168
AccB7I	CCANNNNNTGG	3 cut(s)	596, 734, 931
AccI	GTMKAC	1 cut(s)	1875
AccII	CGCG	2 cut(s)	212, 811
AciI	CCGC	8 cut(s)	172, 210, 212, 264, 809, 1063, 1234, 1658
AclI	AACGTT	1 cut(s)	1104
AclWI	GGATC	7 cut(s)	51, 64, 154, 381, 743, 756, 1420
AcoI	YGGCCR	2 cut(s)	1539, 1858
AcuI	CTGAAG	2 cut(s)	1482, 1524
AcyI	GRCGYC	1 cut(s)	1921
AfaI	GTAC	5 cut(s)	170, 473, 743, 2165, 2307
AfeI	AGCGCT	1 cut(s)	1782
AjnI	CCWGG	6 cut(s)	713, 1480, 1671, 1932, 2155, 2257
AjuI	GAANNNNNNNTTGG	6 cut(s)	646, 678, 1497, 1529, 2382, 2414
AleI	CACNNNNGTG	1 cut(s)	2327
AluBI	AGCT	8 cut(s)	242, 261, 508, 806, 843, 1143, 1617, 1985
AluI	AGCT	8 cut(s)	242, 261, 508, 806, 843, 1143, 1617, 1985
Alw21I	GWGCWC	1 cut(s)	345
Alw26I	GTCTC	4 cut(s)	76, 386, 1504, 2369
AlwI	GGATC	7 cut(s)	51, 64, 154, 381, 743, 756, 1420
Aor51HI	AGCGCT	1 cut(s)	1782
AoxI	GGCC	7 cut(s)	90, 1057, 1114, 1493, 1539, 1858, 2218
ApeKI	GCWGC	7 cut(s)	38, 41, 44, 47, 491, 722, 1614
AseI	ATTAAT	1 cut(s)	102
Asp700I	GAANNNNTTC	1 cut(s)	768
Asp718I	GGTACC	1 cut(s)	168
AspLEI	GCGC	1 cut(s)	1783
AspS9I	GGNCC	4 cut(s)	90, 706, 1021, 2453
AsuHPI	GGTGA	4 cut(s)	1316, 1697, 1835, 2304
AvaII	GGWCC	3 cut(s)	706, 1021, 2453
AxyI	CCTNAGG	1 cut(s)	1017
BalI	TGGCCA	2 cut(s)	1541, 1860
BamHI	GGATCC	2 cut(s)	56, 748
BanI	GGYRCC	1 cut(s)	168
BanII	GRGCYC	1 cut(s)	487
BbsI	GAAGAC	1 cut(s)	2064
Bbv12I	GWGCWC	1 cut(s)	345
BbvI	GCAGC	7 cut(s)	25, 28, 31, 34, 478, 734, 1626
BceAI	ACGGC	1 cut(s)	977
BciT130I	CCWGG	6 cut(s)	715, 1482, 1673, 1934, 2157, 2259
BciVI	GTATCC	3 cut(s)	686, 908, 1933
BcoDI	GTCTC	4 cut(s)	76, 386, 1504, 2369
BfaI	CTAG	3 cut(s)	410, 1055, 2177
BfoI	RGCGCY	1 cut(s)	1784
BfuI	GTATCC	3 cut(s)	686, 908, 1933
BglI	GCCNNNNNGGC	1 cut(s)	1122
BglII	AGATCT	1 cut(s)	1004
BisI	GCNGC	8 cut(s)	39, 42, 45, 48, 210, 492, 723, 1615
BlsI	GCNGC	8 cut(s)	40, 43, 46, 49, 211, 493, 724, 1616
BmcAI	AGTACT	1 cut(s)	2307
Bme1390I	CCNGG	6 cut(s)	715, 1482, 1673, 1934, 2157, 2259
Bme18I	GGWCC	3 cut(s)	706, 1021, 2453
BmgT120I	GGNCC	4 cut(s)	90, 706, 1021, 2453
BmrFI	CCNGG	6 cut(s)	715, 1482, 1673, 1934, 2157, 2259
BmrI	ACTGGG	1 cut(s)	754
BmsI	GCATC	8 cut(s)	321, 790, 968, 1381, 1398, 1435, 1741, 2176
BmuI	ACTGGG	1 cut(s)	754
BpiI	GAAGAC	1 cut(s)	2064
BpmI	CTGGAG	2 cut(s)	1286, 2378
Bpu10I	CCTNAGC	1 cut(s)	495
BpuEI	CTTGAG	4 cut(s)	328, 408, 1273, 1972
Bsa29I	ATCGAT	1 cut(s)	315
BsaBI	GATNNNNATC	1 cut(s)	1944
BsaHI	GRCGYC	1 cut(s)	1921
BsaJI	CCNNGG	6 cut(s)	210, 324, 702, 1327, 2156, 2258
BsaWI	WCCGGW	1 cut(s)	639
BsaXI	ACNNNNNCTCC	4 cut(s)	245, 275, 2076, 2106
Bse118I	RCCGGY	2 cut(s)	1527, 2314
Bse1I	ACTGG	3 cut(s)	134, 749, 925
Bse21I	CCTNAGG	1 cut(s)	1017
Bse3DI	GCAATG	3 cut(s)	1542, 1900, 2452
Bse8I	GATNNNNATC	1 cut(s)	1944
BseBI	CCWGG	6 cut(s)	715, 1482, 1673, 1934, 2157, 2259
BseCI	ATCGAT	1 cut(s)	315
BseDI	CCNNGG	6 cut(s)	210, 324, 702, 1327, 2156, 2258
BseJI	GATNNNNATC	1 cut(s)	1944
BseMI	GCAATG	3 cut(s)	1542, 1900, 2452
BseMII	CTCAG	6 cut(s)	71, 77, 509, 858, 1008, 1629
BseNI	ACTGG	3 cut(s)	134, 749, 925
BseRI	GAGGAG	1 cut(s)	1283
BseXI	GCAGC	7 cut(s)	25, 28, 31, 34, 478, 734, 1626
BseYI	CCCAGC	1 cut(s)	709
BsgI	GTGCAG	1 cut(s)	1936
Bsh1236I	CGCG	2 cut(s)	212, 811
BshFI	GGCC	7 cut(s)	92, 1059, 1116, 1495, 1541, 1860, 2220
BshNI	GGYRCC	1 cut(s)	168
BshVI	ATCGAT	1 cut(s)	315
BsiHKAI	GWGCWC	1 cut(s)	345
BsiSI	CCGG	3 cut(s)	640, 1528, 2315
BslFI	GGGAC	2 cut(s)	530, 2274
BsmAI	GTCTC	4 cut(s)	76, 386, 1504, 2369
BsmFI	GGGAC	2 cut(s)	530, 2274
BsmI	GAATGC	2 cut(s)	946, 1975
BsnI	GGCC	7 cut(s)	92, 1059, 1116, 1495, 1541, 1860, 2220
Bsp1286I	GDGCHC	2 cut(s)	345, 487
Bsp19I	CCATGG	1 cut(s)	1327
BspACI	CCGC	8 cut(s)	172, 210, 212, 264, 809, 1063, 1234, 1658
BspANI	GGCC	7 cut(s)	92, 1059, 1116, 1495, 1541, 1860, 2220
BspCNI	CTCAG	6 cut(s)	72, 78, 508, 857, 1009, 1630
BspDI	ATCGAT	1 cut(s)	315
BspFNI	CGCG	2 cut(s)	212, 811
BspHI	TCATGA	2 cut(s)	1360, 1666
BspPI	GGATC	7 cut(s)	51, 64, 154, 381, 743, 756, 1420
BspT107I	GGYRCC	1 cut(s)	168
BsrDI	GCAATG	3 cut(s)	1542, 1900, 2452
BsrFI	RCCGGY	2 cut(s)	1527, 2314
BsrI	ACTGG	3 cut(s)	134, 749, 925
BssAI	RCCGGY	2 cut(s)	1527, 2314
BssECI	CCNNGG	6 cut(s)	210, 324, 702, 1327, 2156, 2258
BssNI	GRCGYC	1 cut(s)	1921
BssT1I	CCWWGG	2 cut(s)	324, 1327
Bst2UI	CCWGG	6 cut(s)	715, 1482, 1673, 1934, 2157, 2259
Bst4CI	ACNGT	5 cut(s)	476, 703, 922, 1453, 2288
Bst6I	CTCTTC	4 cut(s)	279, 1581, 2206, 2412
BstACI	GRCGYC	1 cut(s)	1921
BstAPI	GCANNNNNTGC	1 cut(s)	1740
BstC8I	GCNNGC	4 cut(s)	126, 1061, 1413, 1533
BstDEI	CTNAG	6 cut(s)	80, 86, 495, 844, 1017, 1638
BstDSI	CCRYGG	3 cut(s)	210, 702, 1327
BstFNI	CGCG	2 cut(s)	212, 811
BstH2I	RGCGCY	1 cut(s)	1784
BstHHI	GCGC	1 cut(s)	1783
BstMAI	GTCTC	4 cut(s)	76, 386, 1504, 2369
BstMWI	GCNNNNNNNGC	7 cut(s)	44, 47, 491, 500, 719, 1122, 1740
BstNI	CCWGG	6 cut(s)	715, 1482, 1673, 1934, 2157, 2259
BstNSI	RCATGY	2 cut(s)	1738, 2328
BstSCI	CCNGG	6 cut(s)	713, 1480, 1671, 1932, 2155, 2257
BstUI	CGCG	2 cut(s)	212, 811
BstV1I	GCAGC	7 cut(s)	25, 28, 31, 34, 478, 734, 1626
BstV2I	GAAGAC	1 cut(s)	2064
BstX2I	RGATCY	4 cut(s)	56, 146, 748, 1004
BstYI	RGATCY	4 cut(s)	56, 146, 748, 1004
Bsu15I	ATCGAT	1 cut(s)	315
Bsu36I	CCTNAGG	1 cut(s)	1017
BsuI	GTATCC	3 cut(s)	686, 908, 1933
BsuRI	GGCC	7 cut(s)	92, 1059, 1116, 1495, 1541, 1860, 2220
BsuTUI	ATCGAT	1 cut(s)	315
BtgI	CCRYGG	3 cut(s)	210, 702, 1327
BtgZI	GCGATG	1 cut(s)	144
BtsI	GCAGTG	1 cut(s)	273
BtsIMutI	CAGTG	2 cut(s)	273, 1635
Cac8I	GCNNGC	4 cut(s)	126, 1061, 1413, 1533
CciI	TCATGA	2 cut(s)	1360, 1666
CfoI	GCGC	1 cut(s)	1783
Cfr10I	RCCGGY	2 cut(s)	1527, 2314
Cfr13I	GGNCC	4 cut(s)	90, 706, 1021, 2453
Cfr42I	CCGCGG	1 cut(s)	213
ClaI	ATCGAT	1 cut(s)	315
CseI	GACGC	1 cut(s)	1929
CsiI	ACCWGGT	1 cut(s)	1932
Csp6I	GTAC	5 cut(s)	169, 472, 742, 2164, 2306
CviQI	GTAC	5 cut(s)	169, 472, 742, 2164, 2306
DdeI	CTNAG	6 cut(s)	80, 86, 495, 844, 1017, 1638
DraI	TTTAAA	1 cut(s)	1276
EaeI	YGGCCR	2 cut(s)	1539, 1858
Eam1104I	CTCTTC	4 cut(s)	279, 1581, 2206, 2412
EarI	CTCTTC	4 cut(s)	279, 1581, 2206, 2412
Eco130I	CCWWGG	2 cut(s)	324, 1327
Eco147I	AGGCCT	1 cut(s)	1059
Eco24I	GRGCYC	1 cut(s)	487
Eco47I	GGWCC	3 cut(s)	706, 1021, 2453
Eco47III	AGCGCT	1 cut(s)	1782
Eco57I	CTGAAG	2 cut(s)	1482, 1524
Eco81I	CCTNAGG	1 cut(s)	1017
EcoO109I	RGGNCCY	2 cut(s)	90, 1021
EcoRII	CCWGG	6 cut(s)	713, 1480, 1671, 1932, 2155, 2257
EcoT14I	CCWWGG	2 cut(s)	324, 1327
EcoT22I	ATGCAT	2 cut(s)	961, 1975
EcoT38I	GRGCYC	1 cut(s)	487
ErhI	CCWWGG	2 cut(s)	324, 1327
FalI	AAGNNNNNCTT	2 cut(s)	329, 361
FaqI	GGGAC	2 cut(s)	530, 2274
FauI	CCCGC	1 cut(s)	1056
FauNDI	CATATG	3 cut(s)	397, 730, 2125
FblI	GTMKAC	1 cut(s)	1875
Fnu4HI	GCNGC	8 cut(s)	39, 42, 45, 48, 210, 492, 723, 1615
FriOI	GRGCYC	1 cut(s)	487
Fsp4HI	GCNGC	8 cut(s)	39, 42, 45, 48, 210, 492, 723, 1615
FspBI	CTAG	3 cut(s)	410, 1055, 2177
GlaI	GCGC	1 cut(s)	1782
GluI	GCNGC	8 cut(s)	39, 42, 45, 48, 210, 492, 723, 1615
GsaI	CCCAGC	1 cut(s)	713
GsuI	CTGGAG	2 cut(s)	1286, 2378
HaeII	RGCGCY	1 cut(s)	1784
HaeIII	GGCC	7 cut(s)	92, 1059, 1116, 1495, 1541, 1860, 2220
HapII	CCGG	3 cut(s)	640, 1528, 2315
HgaI	GACGC	1 cut(s)	1929
HhaI	GCGC	1 cut(s)	1783
Hin1I	GRCGYC	1 cut(s)	1921
Hin6I	GCGC	1 cut(s)	1781
HinP1I	GCGC	1 cut(s)	1781
HincII	GTYRAC	3 cut(s)	192, 1876, 2230
HindII	GTYRAC	3 cut(s)	192, 1876, 2230
HinfI	GANTC	3 cut(s)	303, 1151, 1663
HpaII	CCGG	3 cut(s)	640, 1528, 2315
HphI	GGTGA	4 cut(s)	1316, 1697, 1835, 2304
Hpy166II	GTNNAC	8 cut(s)	192, 472, 706, 742, 1084, 1876, 2204, 2230
Hpy188I	TCNGA	7 cut(s)	378, 763, 847, 902, 1425, 1504, 2488
Hpy8I	GTNNAC	8 cut(s)	192, 472, 706, 742, 1084, 1876, 2204, 2230
HpyAV	CCTTC	7 cut(s)	395, 1499, 1883, 2243, 2308, 2398, 2471
HpyCH4III	ACNGT	5 cut(s)	476, 703, 922, 1453, 2288
HpyCH4IV	ACGT	1 cut(s)	1104
HpyCH4V	TGCA	7 cut(s)	959, 1094, 1448, 1614, 1917, 1973, 2174
HpyF10VI	GCNNNNNNNGC	7 cut(s)	44, 47, 491, 500, 719, 1122, 1740
HpyF3I	CTNAG	6 cut(s)	80, 86, 495, 844, 1017, 1638
HpySE526I	ACGT	1 cut(s)	1104
Hsp92I	GRCGYC	1 cut(s)	1921
HspAI	GCGC	1 cut(s)	1781
KpnI	GGTACC	1 cut(s)	172
KspI	CCGCGG	1 cut(s)	213
LmnI	GCTCC	6 cut(s)	266, 340, 490, 542, 811, 943
Lsp1109I	GCAGC	7 cut(s)	25, 28, 31, 34, 478, 734, 1626
LweI	GCATC	8 cut(s)	321, 790, 968, 1381, 1398, 1435, 1741, 2176
MabI	ACCWGGT	1 cut(s)	1932
MaeI	CTAG	3 cut(s)	410, 1055, 2177
MaeII	ACGT	1 cut(s)	1104
MaeIII	GTNAC	8 cut(s)	136, 268, 976, 1097, 1105, 1303, 1685, 2147
MfeI	CAATTG	2 cut(s)	1677, 1695
MflI	RGATCY	4 cut(s)	56, 146, 748, 1004
MhlI	GDGCHC	2 cut(s)	345, 487
MlsI	TGGCCA	2 cut(s)	1541, 1860
MluNI	TGGCCA	2 cut(s)	1541, 1860
MlyI	GAGTC	2 cut(s)	1160, 1672
MmeI	TCCRAC	2 cut(s)	811, 1272
Mox20I	TGGCCA	2 cut(s)	1541, 1860
Mph1103I	ATGCAT	2 cut(s)	961, 1975
MroXI	GAANNNNTTC	1 cut(s)	768
MscI	TGGCCA	2 cut(s)	1541, 1860
MslI	CAYNNNNRTG	4 cut(s)	654, 1089, 1326, 2327
Msp20I	TGGCCA	2 cut(s)	1541, 1860
MspA1I	CMGCKG	2 cut(s)	212, 242
MspI	CCGG	3 cut(s)	640, 1528, 2315
MspR9I	CCNGG	6 cut(s)	715, 1482, 1673, 1934, 2157, 2259
MunI	CAATTG	2 cut(s)	1677, 1695
Mva1269I	GAATGC	2 cut(s)	946, 1975
MvaI	CCWGG	6 cut(s)	715, 1482, 1673, 1934, 2157, 2259
MvnI	CGCG	2 cut(s)	212, 811
MwoI	GCNNNNNNNGC	7 cut(s)	44, 47, 491, 500, 719, 1122, 1740
NcoI	CCATGG	1 cut(s)	1327
NdeI	CATATG	3 cut(s)	397, 730, 2125
NmuCI	GTSAC	4 cut(s)	268, 976, 1685, 2147
NsiI	ATGCAT	2 cut(s)	961, 1975
NspI	RCATGY	2 cut(s)	1738, 2328
OliI	CACNNNNGTG	1 cut(s)	2327
PagI	TCATGA	2 cut(s)	1360, 1666
PceI	AGGCCT	1 cut(s)	1059
PctI	GAATGC	2 cut(s)	946, 1975
PdmI	GAANNNNTTC	1 cut(s)	768
PfeI	GAWTC	1 cut(s)	303
PflFI	GACNNNGTC	1 cut(s)	1488
PflMI	CCANNNNNTGG	3 cut(s)	596, 734, 931
PkrI	GCNGC	8 cut(s)	40, 43, 46, 49, 211, 493, 724, 1616
PleI	GAGTC	2 cut(s)	1159, 1671
PpsI	GAGTC	2 cut(s)	1159, 1671
PpuMI	RGGWCCY	1 cut(s)	1021
PshBI	ATTAAT	1 cut(s)	102
Psp1406I	AACGTT	1 cut(s)	1104
Psp5II	RGGWCCY	1 cut(s)	1021
Psp6I	CCWGG	6 cut(s)	713, 1480, 1671, 1932, 2155, 2257
PspFI	CCCAGC	1 cut(s)	709
PspGI	CCWGG	6 cut(s)	713, 1480, 1671, 1932, 2155, 2257
PspPI	GGNCC	4 cut(s)	90, 706, 1021, 2453
PspPPI	RGGWCCY	1 cut(s)	1021
PsuI	RGATCY	4 cut(s)	56, 146, 748, 1004
PsyI	GACNNNGTC	1 cut(s)	1488
PvuII	CAGCTG	1 cut(s)	242
RsaI	GTAC	5 cut(s)	170, 473, 743, 2165, 2307
RsaNI	GTAC	5 cut(s)	169, 472, 742, 2164, 2306
RseI	CAYNNNNRTG	4 cut(s)	654, 1089, 1326, 2327
SacII	CCGCGG	1 cut(s)	213
SalI	GTCGAC	1 cut(s)	1874
SatI	GCNGC	8 cut(s)	39, 42, 45, 48, 210, 492, 723, 1615
Sau96I	GGNCC	4 cut(s)	90, 706, 1021, 2453
ScaI	AGTACT	1 cut(s)	2307
SchI	GAGTC	2 cut(s)	1160, 1672
ScrFI	CCNGG	6 cut(s)	715, 1482, 1673, 1934, 2157, 2259
SduI	GDGCHC	2 cut(s)	345, 487
SexAI	ACCWGGT	1 cut(s)	1932
SfaNI	GCATC	8 cut(s)	321, 790, 968, 1381, 1398, 1435, 1741, 2176
Sfr303I	CCGCGG	1 cut(s)	213
SgrBI	CCGCGG	1 cut(s)	213
SinI	GGWCC	3 cut(s)	706, 1021, 2453
SmiMI	CAYNNNNRTG	4 cut(s)	654, 1089, 1326, 2327
SmlI	CTYRAG	4 cut(s)	307, 423, 1252, 1951
SmoI	CTYRAG	4 cut(s)	307, 423, 1252, 1951
SseBI	AGGCCT	1 cut(s)	1059
SsiI	CCGC	8 cut(s)	172, 210, 212, 264, 809, 1063, 1234, 1658
SspMI	CTAG	3 cut(s)	410, 1055, 2177
StuI	AGGCCT	1 cut(s)	1059
StyD4I	CCNGG	6 cut(s)	713, 1480, 1671, 1932, 2155, 2257
StyI	CCWWGG	2 cut(s)	324, 1327
TaaI	ACNGT	5 cut(s)	476, 703, 922, 1453, 2288
TaiI	ACGT	1 cut(s)	1107
TaqI	TCGA	6 cut(s)	106, 315, 1291, 1875, 2024, 2341
TatI	WGTACW	3 cut(s)	741, 2163, 2305
TauI	GCSGC	1 cut(s)	212
TfiI	GAWTC	1 cut(s)	303
TscAI	CASTG	2 cut(s)	273, 1642
TseFI	GTSAC	4 cut(s)	268, 976, 1685, 2147
TseI	GCWGC	7 cut(s)	38, 41, 44, 47, 491, 722, 1614
Tsp45I	GTSAC	4 cut(s)	268, 976, 1685, 2147
TspGWI	ACGGA	1 cut(s)	2419
TspRI	CASTG	2 cut(s)	273, 1642
Tth111I	GACNNNGTC	1 cut(s)	1488
Van91I	CCANNNNNTGG	3 cut(s)	596, 734, 931
VpaK11BI	GGWCC	3 cut(s)	706, 1021, 2453
VspI	ATTAAT	1 cut(s)	102
XbaI	TCTAGA	1 cut(s)	409
XceI	RCATGY	2 cut(s)	1738, 2328
XcmI	CCANNNNNNNNNTGG	1 cut(s)	547
XmiI	GTMKAC	1 cut(s)	1875
XmnI	GAANNNNTTC	1 cut(s)	768
XspI	CTAG	3 cut(s)	410, 1055, 2177
ZrmI	AGTACT	1 cut(s)	2307
Zsp2I	ATGCAT	2 cut(s)	961, 1975

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.