Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0010925

Physical Location & Seq

Genomic Coordinates Forward (+)

33036333 .. 33037734

Gene Structure 1402 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G356400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 765 bp

ATGGCAGAGGAGTACAACAAAAGCCAAGATCGTGGCTATGAAGGGAAGGCTGGTGAATATGAGGAGGGATCAGGCGCGCGCGCAGCTGAATGTGGTGAGATCAAGGATCGGGGCTTGTTTGATTTCCTGGGGAAGAAAGAGGCGGAGAAGCCTCAGGAGGAGGTGATCGTCACTGAGTTTGAGAAGGTCAAAGTGTCTGATCACGAGGCACCTCATCCTCATCATCATGAACCAGAGTCATACAAAGTAGAACAAGAGGAGGATAAGGAGAAGAAGCACGGTAGTCTTTTGGAGAAGCTTCACCGATCCGACAGCAGCTCTAGCTCTTCGAGCGATGAAGAGGAAGGTGAAGGAGGAGAGAAAAAGAAGAAGAAGAAAGAAAAGAAGGGATTGAAGGAGAAGATCTGTGGTGATCATGATCAGAAGGTGGAGGACACAGCCGTCCCAGTGGAGAAGATCTACGAGGAGCCAACTCATGAAGAAAAGAAAGAGGAAGAGAAGAAGGGTTTCCTTGAGAAAATAAAGGAAAAGCTACCAGGGCAGCAGAAGAAGCCAGAAGAGATTCCAGCTTCGTATGATGATCAGCAGTGTCATGCTCAGCATGCTGAGCCCGCTGAGCCTGCAGGTGTAGGTTGCGAGCCCAAGGAGAAGAAGGGTATCTTGGAGAAGATCAAGGAAAAGATTCCTGGTTACCACCCTAAGACGGAGGAAGAGAAGGAGGCCATCAAGGAGAAGGAGAAGGAAAAGGAAACGTCTTCCTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0001786 GO:0003674 GO:0003779 GO:0005488 GO:0005507 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005911 GO:0006950 GO:0008092 GO:0008150 GO:0008289 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009506 GO:0009628 GO:0009631 GO:0009719 GO:0009725 GO:0009737 GO:0010029 GO:0010033 GO:0010035 GO:0016020 GO:0016151 GO:0019898 GO:0030054 GO:0031210 GO:0031647 GO:0033993 GO:0042221 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0046872 GO:0046914 GO:0048580 GO:0050789 GO:0050793 GO:0050821 GO:0050896 GO:0050997 GO:0051239 GO:0055044 GO:0065007 GO:0065008 GO:0070405 GO:0072341 GO:0090559 GO:0097305 GO:1900140 GO:1901700 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dehydrin

Protein Analysis

255

Amino Acids

28.94

Weight (kDa)

5.27

Isoelectric Point (pI)

48.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010925)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20440 AT1G20450 AT1G20450 AT1G76180 AT1G76180
fragaria_vesca	FvH4_2g37690
malus_domestica	MD08G1004500.v1.1 MD15G1003900.v1.1
prunus_persica	Prupe.1G356400_v2.0.a1
pyrus_communis	pycom15g00280
rosa_chinensis	RchiOBHm_Chr6g0304041
rosa_laevigata	RLG00000011023
rosa_multiflora	Rmu_sc0003805.1_g000015
rosa_roxburghii	Rroxscaffold_7G00164160
rosa_rugosa	Rorug06G0327200
rosa_samantha	Rh6AG441000 Rh6BG461800 Rh6CG453200 Rh6DG440500
rosa_wichuraiana	Rw6G038210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	614
AasI	GACNNNNNNGTC	1 cut(s)	440
Acc36I	ACCTGC	1 cut(s)	614
AccB1I	GGYRCC	1 cut(s)	208
AccII	CGCG	3 cut(s)	77, 79, 81
AciI	CCGC	2 cut(s)	143, 612
AclWI	GGATC	3 cut(s)	76, 114, 300
AfaI	GTAC	1 cut(s)	14
AfiI	CCNNNNNNNGG	1 cut(s)	703
AgsI	TTSAA	1 cut(s)	394
AjnI	CCWGG	3 cut(s)	126, 535, 685
AjuI	GAANNNNNNNTTGG	2 cut(s)	644, 676
AluBI	AGCT	6 cut(s)	86, 298, 318, 324, 532, 569
AluI	AGCT	6 cut(s)	86, 298, 318, 324, 532, 569
AlwI	GGATC	3 cut(s)	76, 114, 300
AoxI	GGCC	1 cut(s)	720
ApeKI	GCWGC	3 cut(s)	83, 315, 541
Asp700I	GAANNNNTTC	3 cut(s)	506, 561, 681
AspLEI	GCGC	4 cut(s)	77, 79, 81, 83
AsuHPI	GGTGA	6 cut(s)	65, 107, 175, 293, 359, 422
AxyI	CCTNAGG	1 cut(s)	153
BanI	GGYRCC	1 cut(s)	208
BanII	GRGCYC	2 cut(s)	612, 642
BauI	CACGAG	1 cut(s)	203
BbsI	GAAGAC	1 cut(s)	747
BbvI	GCAGC	3 cut(s)	95, 327, 553
BccI	CCATC	1 cut(s)	731
BceAI	ACGGC	1 cut(s)	425
BciT130I	CCWGG	3 cut(s)	128, 537, 687
BclI	TGATCA	4 cut(s)	199, 412, 418, 580
BfaI	CTAG	1 cut(s)	321
BfmI	CTRYAG	1 cut(s)	621
BfuAI	ACCTGC	1 cut(s)	614
BglII	AGATCT	2 cut(s)	402, 456
BisI	GCNGC	3 cut(s)	84, 316, 542
BlpI	GCTNAGC	3 cut(s)	597, 606, 615
BlsI	GCNGC	3 cut(s)	85, 317, 543
Bme1390I	CCNGG	3 cut(s)	128, 537, 687
BmiI	GGNNCC	2 cut(s)	210, 468
BmrFI	CCNGG	3 cut(s)	128, 537, 687
BmrI	ACTGGG	1 cut(s)	440
BmuI	ACTGGG	1 cut(s)	440
BpiI	GAAGAC	1 cut(s)	747
Bpu1102I	GCTNAGC	3 cut(s)	597, 606, 615
BpuEI	CTTGAG	1 cut(s)	533
BsaBI	GATNNNNATC	1 cut(s)	417
BsaJI	CCNNGG	3 cut(s)	127, 536, 642
Bsc4I	CCNNNNNNNGG	1 cut(s)	703
Bse1I	ACTGG	1 cut(s)	446
Bse21I	CCTNAGG	1 cut(s)	153
Bse8I	GATNNNNATC	1 cut(s)	417
BseBI	CCWGG	3 cut(s)	128, 537, 687
BseDI	CCNNGG	3 cut(s)	127, 536, 642
BseGI	GGATG	1 cut(s)	214
BseJI	GATNNNNATC	1 cut(s)	417
BseLI	CCNNNNNNNGG	1 cut(s)	703
BseMII	CTCAG	5 cut(s)	165, 167, 597, 606, 611
BseNI	ACTGG	1 cut(s)	446
BsePI	GCGCGC	3 cut(s)	75, 77, 79
BseRI	GAGGAG	6 cut(s)	23, 77, 173, 272, 369, 479
BseXI	GCAGC	3 cut(s)	95, 327, 553
Bsh1236I	CGCG	3 cut(s)	77, 79, 81
BshFI	GGCC	1 cut(s)	722
BshNI	GGYRCC	1 cut(s)	208
BslFI	GGGAC	1 cut(s)	428
BslI	CCNNNNNNNGG	1 cut(s)	703
BsmFI	GGGAC	1 cut(s)	428
BsnI	GGCC	1 cut(s)	722
Bsp1286I	GDGCHC	2 cut(s)	612, 642
Bsp1720I	GCTNAGC	3 cut(s)	597, 606, 615
BspACI	CCGC	2 cut(s)	143, 612
BspANI	GGCC	1 cut(s)	722
BspCNI	CTCAG	5 cut(s)	166, 166, 598, 607, 610
BspFNI	CGCG	3 cut(s)	77, 79, 81
BspHI	TCATGA	3 cut(s)	226, 415, 475
BspLI	GGNNCC	2 cut(s)	210, 468
BspMAI	CTGCAG	1 cut(s)	625
BspMI	ACCTGC	1 cut(s)	614
BspPI	GGATC	3 cut(s)	76, 114, 300
BspQI	GCTCTTC	1 cut(s)	331
BspT107I	GGYRCC	1 cut(s)	208
BsrI	ACTGG	1 cut(s)	446
BssECI	CCNNGG	3 cut(s)	127, 536, 642
BssHII	GCGCGC	3 cut(s)	75, 77, 79
BssSI	CACGAG	1 cut(s)	203
BssT1I	CCWWGG	1 cut(s)	642
Bst2BI	CACGAG	1 cut(s)	203
Bst2UI	CCWGG	3 cut(s)	128, 537, 687
Bst4CI	ACNGT	1 cut(s)	281
Bst6I	CTCTTC	5 cut(s)	331, 333, 489, 552, 705
BstC8I	GCNNGC	7 cut(s)	77, 79, 81, 603, 612, 621, 638
BstDEI	CTNAG	6 cut(s)	153, 174, 597, 606, 615, 699
BstEII	GGTNACC	1 cut(s)	689
BstF5I	GGATG	1 cut(s)	214
BstFNI	CGCG	3 cut(s)	77, 79, 81
BstHHI	GCGC	4 cut(s)	77, 79, 81, 83
BstNI	CCWGG	3 cut(s)	128, 537, 687
BstNSI	RCATGY	1 cut(s)	605
BstPI	GGTNACC	1 cut(s)	689
BstSCI	CCNGG	3 cut(s)	126, 535, 685
BstSFI	CTRYAG	1 cut(s)	621
BstUI	CGCG	3 cut(s)	77, 79, 81
BstV1I	GCAGC	3 cut(s)	95, 327, 553
BstV2I	GAAGAC	1 cut(s)	747
BstX2I	RGATCY	2 cut(s)	402, 456
BstXI	CCANNNNNNTGG	1 cut(s)	32
BstYI	RGATCY	2 cut(s)	402, 456
Bsu36I	CCTNAGG	1 cut(s)	153
BsuRI	GGCC	1 cut(s)	722
BtgZI	GCGATG	1 cut(s)	348
BtsCI	GGATG	1 cut(s)	214
BtsI	GCAGTG	1 cut(s)	593
BtsIMutI	CAGTG	3 cut(s)	171, 453, 593
BveI	ACCTGC	1 cut(s)	614
Cac8I	GCNNGC	7 cut(s)	77, 79, 81, 603, 612, 621, 638
CciI	TCATGA	3 cut(s)	226, 415, 475
CfoI	GCGC	4 cut(s)	77, 79, 81, 83
Csp6I	GTAC	1 cut(s)	13
CviAII	CATG	5 cut(s)	227, 416, 476, 593, 602
CviQI	GTAC	1 cut(s)	13
DdeI	CTNAG	6 cut(s)	153, 174, 597, 606, 615, 699
DrdI	GACNNNNNNGTC	1 cut(s)	440
DseDI	GACNNNNNNGTC	1 cut(s)	440
Eam1104I	CTCTTC	5 cut(s)	331, 333, 489, 552, 705
EarI	CTCTTC	5 cut(s)	331, 333, 489, 552, 705
EciI	GGCGGA	1 cut(s)	158
Eco130I	CCWWGG	1 cut(s)	642
Eco24I	GRGCYC	2 cut(s)	612, 642
Eco81I	CCTNAGG	1 cut(s)	153
Eco91I	GGTNACC	1 cut(s)	689
EcoO65I	GGTNACC	1 cut(s)	689
EcoRII	CCWGG	3 cut(s)	126, 535, 685
EcoT14I	CCWWGG	1 cut(s)	642
EcoT38I	GRGCYC	2 cut(s)	612, 642
ErhI	CCWWGG	1 cut(s)	642
FaeI	CATG	5 cut(s)	230, 419, 479, 596, 605
FaiI	YATR	9 cut(s)	39, 60, 228, 241, 417, 477, 576, 594, 603
FalI	AAGNNNNNCTT	2 cut(s)	644, 676
FaqI	GGGAC	1 cut(s)	428
FatI	CATG	5 cut(s)	226, 415, 475, 592, 601
FauI	CCCGC	1 cut(s)	619
FbaI	TGATCA	4 cut(s)	199, 412, 418, 580
Fnu4HI	GCNGC	3 cut(s)	84, 316, 542
FokI	GGATG	1 cut(s)	201
FriOI	GRGCYC	2 cut(s)	612, 642
Fsp4HI	GCNGC	3 cut(s)	84, 316, 542
FspBI	CTAG	1 cut(s)	321
GlaI	GCGC	4 cut(s)	76, 78, 80, 82
GluI	GCNGC	3 cut(s)	84, 316, 542
HaeIII	GGCC	1 cut(s)	722
HhaI	GCGC	4 cut(s)	77, 79, 81, 83
Hin1II	CATG	5 cut(s)	230, 419, 479, 596, 605
Hin6I	GCGC	4 cut(s)	75, 77, 79, 81
HinP1I	GCGC	4 cut(s)	75, 77, 79, 81
HindIII	AAGCTT	1 cut(s)	296
HinfI	GANTC	3 cut(s)	236, 562, 682
HphI	GGTGA	6 cut(s)	65, 107, 175, 293, 359, 422
Hpy188I	TCNGA	3 cut(s)	199, 310, 423
Hpy188III	TCNNGA	5 cut(s)	155, 203, 227, 416, 476
HpyCH4III	ACNGT	1 cut(s)	281
HpyCH4IV	ACGT	1 cut(s)	752
HpyCH4V	TGCA	1 cut(s)	623
HpyF3I	CTNAG	6 cut(s)	153, 174, 597, 606, 615, 699
HpySE526I	ACGT	1 cut(s)	752
Hsp92II	CATG	5 cut(s)	230, 419, 479, 596, 605
HspAI	GCGC	4 cut(s)	75, 77, 79, 81
Ksp22I	TGATCA	4 cut(s)	199, 412, 418, 580
LguI	GCTCTTC	1 cut(s)	331
LmnI	GCTCC	1 cut(s)	466
Lsp1109I	GCAGC	3 cut(s)	95, 327, 553
MaeI	CTAG	1 cut(s)	321
MaeII	ACGT	1 cut(s)	752
MaeIII	GTNAC	2 cut(s)	169, 689
MauBI	CGCGCGCG	1 cut(s)	77
MflI	RGATCY	2 cut(s)	402, 456
MhlI	GDGCHC	2 cut(s)	612, 642
MlyI	GAGTC	1 cut(s)	245
MmeI	TCCRAC	1 cut(s)	333
MroXI	GAANNNNTTC	3 cut(s)	506, 561, 681
MseI	TTAA	1 cut(s)	763
MslI	CAYNNNNRTG	1 cut(s)	225
MspA1I	CMGCKG	2 cut(s)	86, 614
MspR9I	CCNGG	3 cut(s)	128, 537, 687
MvaI	CCWGG	3 cut(s)	128, 537, 687
MvnI	CGCG	3 cut(s)	77, 79, 81
NlaIII	CATG	5 cut(s)	230, 419, 479, 596, 605
NlaIV	GGNNCC	2 cut(s)	210, 468
NmuCI	GTSAC	1 cut(s)	169
NspI	RCATGY	1 cut(s)	605
PaeI	GCATGC	1 cut(s)	605
PagI	TCATGA	3 cut(s)	226, 415, 475
PaqCI	CACCTGC	1 cut(s)	614
PauI	GCGCGC	3 cut(s)	75, 77, 79
PciSI	GCTCTTC	1 cut(s)	331
PdmI	GAANNNNTTC	3 cut(s)	506, 561, 681
PfeI	GAWTC	2 cut(s)	562, 682
PkrI	GCNGC	3 cut(s)	85, 317, 543
PleI	GAGTC	1 cut(s)	244
PpsI	GAGTC	1 cut(s)	244
Psp6I	CCWGG	3 cut(s)	126, 535, 685
PspEI	GGTNACC	1 cut(s)	689
PspGI	CCWGG	3 cut(s)	126, 535, 685
PspN4I	GGNNCC	2 cut(s)	210, 468
PstI	CTGCAG	1 cut(s)	625
PsuI	RGATCY	2 cut(s)	402, 456
PteI	GCGCGC	3 cut(s)	75, 77, 79
PvuII	CAGCTG	1 cut(s)	86
RsaI	GTAC	1 cut(s)	14
RsaNI	GTAC	1 cut(s)	13
RseI	CAYNNNNRTG	1 cut(s)	225
SapI	GCTCTTC	1 cut(s)	331
SaqAI	TTAA	1 cut(s)	763
SatI	GCNGC	3 cut(s)	84, 316, 542
SbfI	CCTGCAGG	1 cut(s)	625
SchI	GAGTC	1 cut(s)	245
ScrFI	CCNGG	3 cut(s)	128, 537, 687
SdaI	CCTGCAGG	1 cut(s)	625
SduI	GDGCHC	2 cut(s)	612, 642
SfcI	CTRYAG	1 cut(s)	621
SmiMI	CAYNNNNRTG	1 cut(s)	225
SmlI	CTYRAG	1 cut(s)	512
SmoI	CTYRAG	1 cut(s)	512
SphI	GCATGC	1 cut(s)	605
Sse8387I	CCTGCAGG	1 cut(s)	625
SsiI	CCGC	2 cut(s)	143, 612
SspMI	CTAG	1 cut(s)	321
StyD4I	CCNGG	3 cut(s)	126, 535, 685
StyI	CCWWGG	1 cut(s)	642
TaaI	ACNGT	1 cut(s)	281
TaiI	ACGT	1 cut(s)	755
TaqI	TCGA	1 cut(s)	329
TatI	WGTACW	1 cut(s)	12
TfiI	GAWTC	2 cut(s)	562, 682
Tru1I	TTAA	1 cut(s)	763
Tru9I	TTAA	1 cut(s)	763
TscAI	CASTG	3 cut(s)	178, 453, 593
TseFI	GTSAC	1 cut(s)	169
TseI	GCWGC	3 cut(s)	83, 315, 541
Tsp45I	GTSAC	1 cut(s)	169
TspDTI	ATGAA	4 cut(s)	54, 243, 351, 492
TspGWI	ACGGA	1 cut(s)	719
TspRI	CASTG	3 cut(s)	178, 453, 593
XceI	RCATGY	1 cut(s)	605
XmnI	GAANNNNTTC	3 cut(s)	506, 561, 681
XspI	CTAG	1 cut(s)	321

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.