Prupe.1G357800_v2.0.a1

Belongs to the glycosyl hydrolase 13 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
33116436 .. 33121513
5078 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G357800.1

Sequence Viewer

Length: 1242 bp
ATGGGTCACCGAGGCAATGATTCAAATGAAAATAGTCAGCAGACTGATATTGGTGCAGCACTACGCAATGGAAGAGAAATCCTTTTTCAGGCCTTTAATTGGGAGTCTCATAAACATGATTGGTGGAGAAATTTAGAAAGGAAAGTTCCGGATATGGGAAGATCTGGTTTTACATCAGCATGGTTGCCACCAGCAACCCATTCCTTCGCACCTGAAGGTTACCTTCCGCAGAACCTATATTCCCTCAATTCTAAGTATGGATCTGAGCACCTATTAAAAGGTTTACTTCAGAAAATGAAGCAACATAAAGTTAGACCAATGGCTGACATAGTCATCAATCATCGTGTTGGAACTACCCAAGGGCATGGTGGAATGTACAACCGCTACGATGGAATTTCATTGTCATGGGATGAACATGCTGTCACATCTTGTACCGGTGGATTGGGTAACCGAAGCACTGGGGACAATTTCCATGGAGTTCCAAATATTGATCACACCCAACTTTTTGTTCGAAAAGATATTACAGCATGGCTACAGTGGCTACGTAATAATGTTGGTTTTCAGGATTTTAGATTTGATTTTGCAAGGGGTTATTCAGCAAAATATGTGAAAGAATATATTGAAGGAGCAAAACCAATTTTTTCTGTTGGGGAGTATTGGGATTCTTGTAACTACAATGGTCATGGCTTGGATTACAACCAAGATAGCCACAGACAGCGGATAATAAATTGGATTGATGGAGCAGGACAGCTATCAACTGCATTTGATTTCACAACCAAGGGAATTCTTCAGGAAGCTGTTAAGGGACAATTGTGGCGCCTACGTGACCCCCAAGGGAAGCCACCAGGTGTAATTGGATGGTGGCCTTCAAGAGCTGTCACATTCCTAGATAACCATGATACAGGCTCAACACAGGCTCATTGGCCCTTCCCTTCAAATCATATTATGGAGGGTTATGCATATATACTCACGCACCCAGGAATACCGTCAGTTTTCTATGATCATTTCTATGATTGGAGTGACTCCATTCATGATCAGATTGTGAAACTGATTGACATCAGGAAGCATCAAGACATTCATAGCCGGTCATCTATAAGGATCCTGGAGGCCCAGCCGAACCTCTACTCTGCTATAATAGGAGAGAAAGTGTGCATGAAAATTGGGGATAGTTCATGGTGCCCAACCGGTAGAGAGTGGACACTGGCAACCTGTGGCCACAGATATGCTATTTGGCACAAGTAA

Protein Analysis

414

Amino Acids

47.33

Weight (kDa)

7.79

Isoelectric Point (pI)

41.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 816, 1176
AccIII TCCGGA 1 cut(s) 148
AciI CCGC 3 cut(s) 227, 382, 718
AclWI GGATC 3 cut(s) 268, 1093, 1106
AcoI YGGCCR 1 cut(s) 1213
AcsI RAATTY 3 cut(s) 130, 393, 783
AcuI CTGAAG 3 cut(s) 234, 272, 773
AcyI GRCGYC 1 cut(s) 817
AdeI CACNNNGTG 1 cut(s) 848
AfaI GTAC 2 cut(s) 377, 433
AfiI CCNNNNNNNGG 3 cut(s) 88, 99, 155
AgeI ACCGGT 2 cut(s) 434, 1184
AgsI TTSAA 4 cut(s) 24, 623, 870, 936
AjnI CCWGG 3 cut(s) 844, 976, 1101
AjuI GAANNNNNNNTTGG 2 cut(s) 492, 524
AloI GAACNNNNNNTCC 2 cut(s) 224, 256
AluBI AGCT 3 cut(s) 751, 797, 875
AluI AGCT 3 cut(s) 751, 797, 875
Alw21I GWGCWC 1 cut(s) 270
Alw26I GTCTC 1 cut(s) 111
AlwI GGATC 3 cut(s) 268, 1093, 1106
Aor13HI TCCGGA 1 cut(s) 148
AoxI GGCC 5 cut(s) 90, 863, 923, 1107, 1213
ApeKI GCWGC 1 cut(s) 56
ApoI RAATTY 3 cut(s) 130, 393, 783
AsiGI ACCGGT 2 cut(s) 434, 1184
AspLEI GCGC 1 cut(s) 819
AspS9I GGNCC 2 cut(s) 924, 1108
AsuII TTCGAA 1 cut(s) 511
BaeGI GKGCMC 1 cut(s) 1181
BalI TGGCCA 1 cut(s) 1215
BamHI GGATCC 1 cut(s) 1098
BanI GGYRCC 2 cut(s) 816, 1176
Bbv12I GWGCWC 1 cut(s) 270
BbvI GCAGC 1 cut(s) 68
BccI CCATC 3 cut(s) 383, 731, 852
BciT130I CCWGG 3 cut(s) 846, 978, 1103
BclI TGATCA 3 cut(s) 490, 1000, 1033
BcoDI GTCTC 1 cut(s) 111
BfaI CTAG 1 cut(s) 887
BfmI CTRYAG 1 cut(s) 533
BfoI RGCGCY 1 cut(s) 820
BglII AGATCT 1 cut(s) 161
BisI GCNGC 1 cut(s) 57
BlsI GCNGC 1 cut(s) 58
Bme1390I CCNGG 3 cut(s) 846, 978, 1103
BmgT120I GGNCC 2 cut(s) 924, 1108
BmiI GGNNCC 3 cut(s) 818, 1100, 1178
BmrFI CCNGG 3 cut(s) 846, 978, 1103
BmrI ACTGGG 1 cut(s) 468
BmsI GCATC 1 cut(s) 1075
BmuI ACTGGG 1 cut(s) 468
BpmI CTGGAG 1 cut(s) 1124
Bpu14I TTCGAA 1 cut(s) 511
BsaAI YACGTR 2 cut(s) 545, 824
BsaBI GATNNNNATC 1 cut(s) 1055
BsaHI GRCGYC 1 cut(s) 817
BsaJI CCNNGG 6 cut(s) 10, 358, 472, 777, 832, 976
BsaWI WCCGGW 3 cut(s) 148, 434, 1184
BsaXI ACNNNNNCTCC 2 cut(s) 1131, 1161
Bsc4I CCNNNNNNNGG 3 cut(s) 88, 99, 155
Bse118I RCCGGY 3 cut(s) 434, 1083, 1184
Bse1I ACTGG 2 cut(s) 463, 1206
Bse3DI GCAATG 2 cut(s) 22, 73
Bse8I GATNNNNATC 1 cut(s) 1055
BseAI TCCGGA 1 cut(s) 148
BseBI CCWGG 3 cut(s) 846, 978, 1103
BseDI CCNNGG 6 cut(s) 10, 358, 472, 777, 832, 976
BseGI GGATG 2 cut(s) 415, 863
BseJI GATNNNNATC 1 cut(s) 1055
BseLI CCNNNNNNNGG 3 cut(s) 88, 99, 155
BseMI GCAATG 2 cut(s) 22, 73
BseMII CTCAG 1 cut(s) 255
BseNI ACTGG 2 cut(s) 463, 1206
BseSI GKGCMC 1 cut(s) 1181
BseXI GCAGC 1 cut(s) 68
BseYI CCCAGC 1 cut(s) 1110
BsgI GTGCAG 1 cut(s) 75
BshFI GGCC 5 cut(s) 92, 865, 925, 1109, 1215
BshNI GGYRCC 2 cut(s) 816, 1176
BshTI ACCGGT 2 cut(s) 434, 1184
BsiHKAI GWGCWC 1 cut(s) 270
BsiSI CCGG 4 cut(s) 149, 435, 1084, 1185
BslFI GGGAC 2 cut(s) 476, 819
BslI CCNNNNNNNGG 3 cut(s) 88, 99, 155
BsmAI GTCTC 1 cut(s) 111
BsmFI GGGAC 2 cut(s) 476, 819
BsnI GGCC 5 cut(s) 92, 865, 925, 1109, 1215
Bsp119I TTCGAA 1 cut(s) 511
Bsp1286I GDGCHC 2 cut(s) 270, 1181
Bsp13I TCCGGA 1 cut(s) 148
Bsp1407I TGTACA 1 cut(s) 375
Bsp143I GATC 6 cut(s) 161, 260, 490, 1000, 1033, 1098
Bsp19I CCATGG 1 cut(s) 472
BspACI CCGC 3 cut(s) 227, 382, 718
BspANI GGCC 5 cut(s) 92, 865, 925, 1109, 1215
BspCNI CTCAG 1 cut(s) 256
BspEI TCCGGA 1 cut(s) 148
BspHI TCATGA 1 cut(s) 1030
BspLI GGNNCC 3 cut(s) 818, 1100, 1178
BspPI GGATC 3 cut(s) 268, 1093, 1106
BspT104I TTCGAA 1 cut(s) 511
BspT107I GGYRCC 2 cut(s) 816, 1176
BsrDI GCAATG 2 cut(s) 22, 73
BsrFI RCCGGY 3 cut(s) 434, 1083, 1184
BsrGI TGTACA 1 cut(s) 375
BsrI ACTGG 2 cut(s) 463, 1206
BssAI RCCGGY 3 cut(s) 434, 1083, 1184
BssECI CCNNGG 6 cut(s) 10, 358, 472, 777, 832, 976
BssMI GATC 6 cut(s) 161, 260, 490, 1000, 1033, 1098
BssNI GRCGYC 1 cut(s) 817
BssT1I CCWWGG 4 cut(s) 358, 472, 777, 832
Bst2UI CCWGG 3 cut(s) 846, 978, 1103
Bst4CI ACNGT 2 cut(s) 537, 987
Bst6I CTCTTC 1 cut(s) 67
BstACI GRCGYC 1 cut(s) 817
BstAUI TGTACA 1 cut(s) 375
BstBAI YACGTR 2 cut(s) 545, 824
BstBI TTCGAA 1 cut(s) 511
BstDEI CTNAG 2 cut(s) 252, 264
BstDSI CCRYGG 1 cut(s) 472
BstEII GGTNACC 3 cut(s) 5, 218, 446
BstENI CCTNNNNNAGG 1 cut(s) 86
BstF5I GGATG 2 cut(s) 415, 863
BstH2I RGCGCY 1 cut(s) 820
BstHHI GCGC 1 cut(s) 819
BstKTI GATC 6 cut(s) 164, 263, 493, 1003, 1036, 1101
BstMAI GTCTC 1 cut(s) 111
BstMBI GATC 6 cut(s) 161, 260, 490, 1000, 1033, 1098
BstMWI GCNNNNNNNGC 1 cut(s) 538
BstNI CCWGG 3 cut(s) 846, 978, 1103
BstNSI RCATGY 1 cut(s) 419
BstPI GGTNACC 3 cut(s) 5, 218, 446
BstSCI CCNGG 3 cut(s) 844, 976, 1101
BstSFI CTRYAG 1 cut(s) 533
BstSLI GKGCMC 1 cut(s) 1181
BstSNI TACGTA 1 cut(s) 545
BstV1I GCAGC 1 cut(s) 68
BstX2I RGATCY 3 cut(s) 161, 260, 1098
BstXI CCANNNNNNTGG 1 cut(s) 365
BstYI RGATCY 3 cut(s) 161, 260, 1098
BsuRI GGCC 5 cut(s) 92, 865, 925, 1109, 1215
BtgI CCRYGG 1 cut(s) 472
BtsCI GGATG 2 cut(s) 415, 863
BtsIMutI CAGTG 3 cut(s) 456, 542, 1199
CciI TCATGA 1 cut(s) 1030
CfoI GCGC 1 cut(s) 819
Cfr10I RCCGGY 3 cut(s) 434, 1083, 1184
Cfr13I GGNCC 2 cut(s) 924, 1108
CsiI ACCWGGT 1 cut(s) 844
Csp6I GTAC 2 cut(s) 376, 432
CspAI ACCGGT 2 cut(s) 434, 1184
CviQI GTAC 2 cut(s) 376, 432
DdeI CTNAG 2 cut(s) 252, 264
DinI GGCGCC 1 cut(s) 818
DpnI GATC 6 cut(s) 163, 262, 492, 1002, 1035, 1100
DpnII GATC 6 cut(s) 161, 260, 490, 1000, 1033, 1098
DraIII CACNNNGTG 1 cut(s) 848
EaeI YGGCCR 1 cut(s) 1213
Eam1104I CTCTTC 1 cut(s) 67
EarI CTCTTC 1 cut(s) 67
Eco105I TACGTA 1 cut(s) 545
Eco130I CCWWGG 4 cut(s) 358, 472, 777, 832
Eco147I AGGCCT 1 cut(s) 92
Eco57I CTGAAG 3 cut(s) 234, 272, 773
Eco91I GGTNACC 3 cut(s) 5, 218, 446
EcoNI CCTNNNNNAGG 1 cut(s) 86
EcoO65I GGTNACC 3 cut(s) 5, 218, 446
EcoRI GAATTC 1 cut(s) 783
EcoRII CCWGG 3 cut(s) 844, 976, 1101
EcoT14I CCWWGG 4 cut(s) 358, 472, 777, 832
EcoT22I ATGCAT 1 cut(s) 961
EgeI GGCGCC 1 cut(s) 818
EheI GGCGCC 1 cut(s) 818
ErhI CCWWGG 4 cut(s) 358, 472, 777, 832
FalI AAGNNNNNCTT 4 cut(s) 207, 239, 270, 302
FaqI GGGAC 2 cut(s) 476, 819
FbaI TGATCA 3 cut(s) 490, 1000, 1033
Fnu4HI GCNGC 1 cut(s) 57
FokI GGATG 2 cut(s) 422, 870
Fsp4HI GCNGC 1 cut(s) 57
FspBI CTAG 1 cut(s) 887
GlaI GCGC 1 cut(s) 818
GluI GCNGC 1 cut(s) 57
GsaI CCCAGC 1 cut(s) 1114
GsuI CTGGAG 1 cut(s) 1124
HaeII RGCGCY 1 cut(s) 820
HaeIII GGCC 5 cut(s) 92, 865, 925, 1109, 1215
HapII CCGG 4 cut(s) 149, 435, 1084, 1185
HhaI GCGC 1 cut(s) 819
Hin1I GRCGYC 1 cut(s) 817
Hin6I GCGC 1 cut(s) 817
HinP1I GCGC 1 cut(s) 817
HinfI GANTC 4 cut(s) 20, 104, 662, 1022
HpaII CCGG 4 cut(s) 149, 435, 1084, 1185
Hpy166II GTNNAC 2 cut(s) 284, 1197
Hpy188I TCNGA 3 cut(s) 265, 291, 1038
Hpy188III TCNNGA 7 cut(s) 149, 563, 791, 870, 1031, 1060, 1070
Hpy8I GTNNAC 2 cut(s) 284, 1197
HpyAV CCTTC 7 cut(s) 209, 214, 233, 617, 876, 937, 942
HpyCH4III ACNGT 2 cut(s) 537, 987
HpyCH4IV ACGT 2 cut(s) 544, 823
HpyCH4V TGCA 5 cut(s) 56, 584, 761, 959, 1152
HpyF10VI GCNNNNNNNGC 1 cut(s) 538
HpyF3I CTNAG 2 cut(s) 252, 264
HpySE526I ACGT 2 cut(s) 544, 823
Hsp92I GRCGYC 1 cut(s) 817
HspAI GCGC 1 cut(s) 817
KasI GGCGCC 1 cut(s) 816
Kpn2I TCCGGA 1 cut(s) 148
Ksp22I TGATCA 3 cut(s) 490, 1000, 1033
Kzo9I GATC 6 cut(s) 161, 260, 490, 1000, 1033, 1098
LmnI GCTCC 2 cut(s) 626, 740
Lsp1109I GCAGC 1 cut(s) 68
LweI GCATC 1 cut(s) 1075
MabI ACCWGGT 1 cut(s) 844
MaeI CTAG 1 cut(s) 887
MaeII ACGT 2 cut(s) 544, 823
MaeIII GTNAC 8 cut(s) 5, 218, 421, 446, 668, 824, 877, 1019
MalI GATC 6 cut(s) 163, 262, 492, 1002, 1035, 1100
MboI GATC 6 cut(s) 161, 260, 490, 1000, 1033, 1098
MboII GAAGA 3 cut(s) 84, 171, 779
MfeI CAATTG 1 cut(s) 809
MflI RGATCY 3 cut(s) 161, 260, 1098
MhlI GDGCHC 2 cut(s) 270, 1181
MlsI TGGCCA 1 cut(s) 1215
MluNI TGGCCA 1 cut(s) 1215
Mly113I GGCGCC 1 cut(s) 817
MlyI GAGTC 2 cut(s) 113, 1016
MmeI TCCRAC 1 cut(s) 328
MnlI CCTC 5 cut(s) 5, 254, 943, 1099, 1130
Mox20I TGGCCA 1 cut(s) 1215
Mph1103I ATGCAT 1 cut(s) 961
MroI TCCGGA 1 cut(s) 148
MscI TGGCCA 1 cut(s) 1215
MseI TTAA 3 cut(s) 96, 275, 801
MslI CAYNNNNRTG 5 cut(s) 114, 178, 403, 1008, 1221
Msp20I TGGCCA 1 cut(s) 1215
MspA1I CMGCKG 1 cut(s) 718
MspI CCGG 4 cut(s) 149, 435, 1084, 1185
MspR9I CCNGG 3 cut(s) 846, 978, 1103
MunI CAATTG 1 cut(s) 809
MvaI CCWGG 3 cut(s) 846, 978, 1103
MwoI GCNNNNNNNGC 1 cut(s) 538
NarI GGCGCC 1 cut(s) 817
NcoI CCATGG 1 cut(s) 472
NdeII GATC 6 cut(s) 161, 260, 490, 1000, 1033, 1098
NlaIV GGNNCC 3 cut(s) 818, 1100, 1178
NmuCI GTSAC 5 cut(s) 5, 421, 824, 877, 1019
NsiI ATGCAT 1 cut(s) 961
NspI RCATGY 1 cut(s) 419
NspV TTCGAA 1 cut(s) 511
PagI TCATGA 1 cut(s) 1030
PceI AGGCCT 1 cut(s) 92
PfeI GAWTC 2 cut(s) 20, 662
PflFI GACNNNGTC 1 cut(s) 329
PfoI TCCNGGA 1 cut(s) 1101
PinAI ACCGGT 2 cut(s) 434, 1184
PkrI GCNGC 1 cut(s) 58
PleI GAGTC 2 cut(s) 112, 1016
PluTI GGCGCC 1 cut(s) 820
PpsI GAGTC 2 cut(s) 112, 1016
Ppu21I YACGTR 2 cut(s) 545, 824
Psp6I CCWGG 3 cut(s) 844, 976, 1101
PspEI GGTNACC 3 cut(s) 5, 218, 446
PspFI CCCAGC 1 cut(s) 1110
PspGI CCWGG 3 cut(s) 844, 976, 1101
PspN4I GGNNCC 3 cut(s) 818, 1100, 1178
PspPI GGNCC 2 cut(s) 924, 1108
PsuI RGATCY 3 cut(s) 161, 260, 1098
PsyI GACNNNGTC 1 cut(s) 329
RsaI GTAC 2 cut(s) 377, 433
RsaNI GTAC 2 cut(s) 376, 432
RseI CAYNNNNRTG 5 cut(s) 114, 178, 403, 1008, 1221
SaqAI TTAA 3 cut(s) 96, 275, 801
SatI GCNGC 1 cut(s) 57
Sau3AI GATC 6 cut(s) 161, 260, 490, 1000, 1033, 1098
Sau96I GGNCC 2 cut(s) 924, 1108
SchI GAGTC 2 cut(s) 113, 1016
ScrFI CCNGG 3 cut(s) 846, 978, 1103
SduI GDGCHC 2 cut(s) 270, 1181
SexAI ACCWGGT 1 cut(s) 844
SfaNI GCATC 1 cut(s) 1075
SfcI CTRYAG 1 cut(s) 533
SfoI GGCGCC 1 cut(s) 818
SfuI TTCGAA 1 cut(s) 511
SmiMI CAYNNNNRTG 5 cut(s) 114, 178, 403, 1008, 1221
SnaBI TACGTA 1 cut(s) 545
SseBI AGGCCT 1 cut(s) 92
SsiI CCGC 3 cut(s) 227, 382, 718
SspDI GGCGCC 1 cut(s) 816
SspI AATATT 1 cut(s) 487
SspMI CTAG 1 cut(s) 887
StuI AGGCCT 1 cut(s) 92
StyD4I CCNGG 3 cut(s) 844, 976, 1101
StyI CCWWGG 4 cut(s) 358, 472, 777, 832
TaaI ACNGT 2 cut(s) 537, 987
TaiI ACGT 2 cut(s) 547, 826
TaqI TCGA 1 cut(s) 511
TatI WGTACW 1 cut(s) 375
TfiI GAWTC 2 cut(s) 20, 662
Tru1I TTAA 3 cut(s) 96, 275, 801
Tru9I TTAA 3 cut(s) 96, 275, 801
TscAI CASTG 3 cut(s) 463, 542, 1206
TseFI GTSAC 5 cut(s) 5, 421, 824, 877, 1019
TseI GCWGC 1 cut(s) 56
Tsp45I GTSAC 5 cut(s) 5, 421, 824, 877, 1019
TspDTI ATGAA 8 cut(s) 42, 311, 387, 426, 1019, 1067, 1161, 1169
TspRI CASTG 3 cut(s) 463, 542, 1206
Tth111I GACNNNGTC 1 cut(s) 329
XagI CCTNNNNNAGG 1 cut(s) 86
XapI RAATTY 3 cut(s) 130, 393, 783
XceI RCATGY 1 cut(s) 419
XcmI CCANNNNNNNNNTGG 1 cut(s) 365
XspI CTAG 1 cut(s) 887
Zsp2I ATGCAT 1 cut(s) 961
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.