Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0007362

Physical Location & Seq

Genomic Coordinates Reverse (-)

36917950 .. 36921765

Gene Structure 3816 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G430800.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 714 bp

ATGAAGGTCCTTGGAATCGATTTCAGCTGTGCGTTGGGGGCTCTTGCCAACGGTCACTTTCCTGAGAAGGATTGCTTGCTGCCCCTTATTTCAAAGCTCCTCGGCTATGCCATCGTCGCCGCTTCCACCACTGTCAAGCTCCCTCAGATAATGAAAATTTTGCAACATGGAAGTGTGAGAGGTCTTAGTATTGTGGCTTTTGAGCTTGAAGTAGTTGGGTACACCATTGCTCTGGCCTATTGTCTTCATAAAGGGCTTCCATTCTCAGCTTATGGGGAATTGGCCTTTCTTCTGATCCAAGCTATAATATTAGTTGCCATTATCTACTATTACTCCCAACCTGTGGGTATGAAAACGTGGATCAGGGCGTTACTATACTGTGCACTAGCACCAACCATATTAGCTGGTCAAATCGATCCTATTCTCTTTGAAGCTCTATATGCATCCCAGCATGCAATTTTTCTATGTGCTAAGATCCCACAGATATGGGCGAACTTTTCTAATAAAAGTACAGGGGAGCTCAGCTTCTTAACCAATTTCATGAATTTTGGAGGTTCTATGGTGAGAGTTTTTACCAGCATCCAAGAAGCAGCACCAAAAAGCGTTTTGCTGGGCTCTGTAATTGGCATTGCAACAAATGCTACCCTTCTGAGTCAGATAATTATATACCAAAAGCCGAAGCCACGTGCTGAGAAGGAGAAGAAAACTGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006464 GO:0006486 GO:0006487 GO:0006488 GO:0006490 GO:0006629 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0019538 GO:0034645 GO:0036211 GO:0043170 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0070085 GO:0071704 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PQ-loop

Protein Analysis

238

Amino Acids

25.8

Weight (kDa)

9.03

Isoelectric Point (pI)

21.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007362)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G07390 AT4G07390 AT5G59470 AT5G59470
fragaria_vesca	FvH4_2g33730
malus_domestica	MD08G1093700.v1.1 MD15G1077400.v1.1
prunus_persica	Prupe.1G430800_v2.0.a1 Prupe.1G430800_v2.0.a1
pyrus_communis	pycom15g07210
rosa_chinensis	RchiOBHm_Chr0c32g0501551 RchiOBHm_Chr6g0308821
rosa_laevigata	RLG00000010615
rosa_multiflora	Rmu_sc0004046.1_g000007
rosa_roxburghii	Rroxscaffold_7G00159890
rosa_rugosa	Rorug06G0368300 Rorug06G0368300
rosa_samantha	Rh3CG360800 Rh3CG366300 Rh5AG388300 Rh6BG489200 Rh6CG494700 Rh6DG480100
rosa_wichuraiana	Rw6G041830 Rw7G029930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	343
AciI	CCGC	1 cut(s)	120
AclWI	GGATC	4 cut(s)	289, 368, 410, 469
AcsI	RAATTY	2 cut(s)	156, 544
AcvI	CACGTG	1 cut(s)	686
AfaI	GTAC	2 cut(s)	221, 511
AfiI	CCNNNNNNNGG	1 cut(s)	343
AgsI	TTSAA	3 cut(s)	93, 209, 431
Alw21I	GWGCWC	2 cut(s)	385, 522
Alw44I	GTGCAC	1 cut(s)	381
AlwI	GGATC	4 cut(s)	289, 368, 410, 469
AoxI	GGCC	2 cut(s)	234, 282
ApaLI	GTGCAC	1 cut(s)	381
ApeKI	GCWGC	2 cut(s)	79, 590
ApoI	RAATTY	2 cut(s)	156, 544
AspS9I	GGNCC	1 cut(s)	7
AsuHPI	GGTGA	1 cut(s)	574
AvaII	GGWCC	1 cut(s)	7
BaeGI	GKGCMC	1 cut(s)	385
BanII	GRGCYC	3 cut(s)	43, 522, 617
BbrPI	CACGTG	1 cut(s)	686
BbsI	GAAGAC	1 cut(s)	236
Bbv12I	GWGCWC	2 cut(s)	385, 522
BbvI	GCAGC	2 cut(s)	66, 602
BccI	CCATC	1 cut(s)	119
BfaI	CTAG	1 cut(s)	386
BisI	GCNGC	3 cut(s)	80, 120, 591
BlpI	GCTNAGC	1 cut(s)	521
BlsI	GCNGC	3 cut(s)	81, 121, 592
Bme18I	GGWCC	1 cut(s)	7
BmgT120I	GGNCC	1 cut(s)	7
BmsI	GCATC	2 cut(s)	452, 588
BpiI	GAAGAC	1 cut(s)	236
Bpu1102I	GCTNAGC	1 cut(s)	521
Bsa29I	ATCGAT	2 cut(s)	18, 414
BsaAI	YACGTR	1 cut(s)	686
BsaJI	CCNNGG	2 cut(s)	10, 100
BsaXI	ACNNNNNCTCC	2 cut(s)	317, 347
Bsc4I	CCNNNNNNNGG	1 cut(s)	343
Bse3DI	GCAATG	2 cut(s)	225, 627
BseCI	ATCGAT	2 cut(s)	18, 414
BseDI	CCNNGG	2 cut(s)	10, 100
BseGI	GGATG	2 cut(s)	443, 579
BseLI	CCNNNNNNNGG	1 cut(s)	343
BseMI	GCAATG	2 cut(s)	225, 627
BseMII	CTCAG	7 cut(s)	54, 158, 279, 535, 641, 681, 699
BseRI	GAGGAG	1 cut(s)	89
BseSI	GKGCMC	1 cut(s)	385
BseXI	GCAGC	2 cut(s)	66, 602
BseYI	CCCAGC	2 cut(s)	447, 610
BshFI	GGCC	2 cut(s)	236, 284
BshVI	ATCGAT	2 cut(s)	18, 414
BsiHKAI	GWGCWC	2 cut(s)	385, 522
BslI	CCNNNNNNNGG	1 cut(s)	343
BsnI	GGCC	2 cut(s)	236, 284
Bsp1286I	GDGCHC	4 cut(s)	43, 385, 522, 617
Bsp143I	GATC	4 cut(s)	294, 360, 415, 474
Bsp1720I	GCTNAGC	1 cut(s)	521
BspACI	CCGC	1 cut(s)	120
BspANI	GGCC	2 cut(s)	236, 284
BspCNI	CTCAG	7 cut(s)	55, 157, 278, 534, 642, 682, 700
BspDI	ATCGAT	2 cut(s)	18, 414
BspHI	TCATGA	1 cut(s)	540
BspPI	GGATC	4 cut(s)	289, 368, 410, 469
BsrDI	GCAATG	2 cut(s)	225, 627
BssECI	CCNNGG	2 cut(s)	10, 100
BssMI	GATC	4 cut(s)	294, 360, 415, 474
BssT1I	CCWWGG	1 cut(s)	10
Bst4CI	ACNGT	3 cut(s)	53, 133, 380
BstAPI	GCANNNNNTGC	1 cut(s)	638
BstBAI	YACGTR	1 cut(s)	686
BstC8I	GCNNGC	2 cut(s)	77, 453
BstDEI	CTNAG	9 cut(s)	63, 144, 185, 265, 471, 521, 650, 690, 708
BstF5I	GGATG	2 cut(s)	443, 579
BstKTI	GATC	4 cut(s)	297, 363, 418, 477
BstMBI	GATC	4 cut(s)	294, 360, 415, 474
BstMWI	GCNNNNNNNGC	4 cut(s)	38, 116, 440, 638
BstNSI	RCATGY	1 cut(s)	455
BstSLI	GKGCMC	1 cut(s)	385
BstV1I	GCAGC	2 cut(s)	66, 602
BstV2I	GAAGAC	1 cut(s)	236
BstX2I	RGATCY	1 cut(s)	474
BstXI	CCANNNNNNTGG	2 cut(s)	232, 486
BstYI	RGATCY	1 cut(s)	474
Bsu15I	ATCGAT	2 cut(s)	18, 414
BsuRI	GGCC	2 cut(s)	236, 284
BsuTUI	ATCGAT	2 cut(s)	18, 414
BtsCI	GGATG	2 cut(s)	443, 579
BtsIMutI	CAGTG	1 cut(s)	129
Cac8I	GCNNGC	2 cut(s)	77, 453
CciI	TCATGA	1 cut(s)	540
Cfr13I	GGNCC	1 cut(s)	7
ClaI	ATCGAT	2 cut(s)	18, 414
Csp6I	GTAC	2 cut(s)	220, 510
CviAII	CATG	3 cut(s)	167, 452, 541
CviQI	GTAC	2 cut(s)	220, 510
DdeI	CTNAG	9 cut(s)	63, 144, 185, 265, 471, 521, 650, 690, 708
DpnI	GATC	4 cut(s)	296, 362, 417, 476
DpnII	GATC	4 cut(s)	294, 360, 415, 474
Ecl136II	GAGCTC	1 cut(s)	520
Eco130I	CCWWGG	1 cut(s)	10
Eco24I	GRGCYC	3 cut(s)	43, 522, 617
Eco47I	GGWCC	1 cut(s)	7
Eco53kI	GAGCTC	1 cut(s)	520
Eco72I	CACGTG	1 cut(s)	686
EcoICRI	GAGCTC	1 cut(s)	520
EcoO109I	RGGNCCY	1 cut(s)	7
EcoT14I	CCWWGG	1 cut(s)	10
EcoT22I	ATGCAT	1 cut(s)	445
EcoT38I	GRGCYC	3 cut(s)	43, 522, 617
ErhI	CCWWGG	1 cut(s)	10
FaeI	CATG	3 cut(s)	170, 455, 544
FalI	AAGNNNNNCTT	2 cut(s)	59, 91
FatI	CATG	3 cut(s)	166, 451, 540
Fnu4HI	GCNGC	3 cut(s)	80, 120, 591
FokI	GGATG	2 cut(s)	430, 566
FriOI	GRGCYC	3 cut(s)	43, 522, 617
Fsp4HI	GCNGC	3 cut(s)	80, 120, 591
FspBI	CTAG	1 cut(s)	386
GluI	GCNGC	3 cut(s)	80, 120, 591
GsaI	CCCAGC	2 cut(s)	451, 614
HaeIII	GGCC	2 cut(s)	236, 284
Hin1II	CATG	3 cut(s)	170, 455, 544
HinfI	GANTC	2 cut(s)	15, 652
HphI	GGTGA	1 cut(s)	574
Hpy166II	GTNNAC	2 cut(s)	222, 383
Hpy188I	TCNGA	4 cut(s)	147, 294, 651, 657
Hpy188III	TCNNGA	2 cut(s)	62, 541
Hpy8I	GTNNAC	2 cut(s)	222, 383
Hpy99I	CGWCG	1 cut(s)	119
HpyAV	CCTTC	3 cut(s)	61, 656, 688
HpyCH4III	ACNGT	3 cut(s)	53, 133, 380
HpyCH4IV	ACGT	2 cut(s)	356, 685
HpyCH4V	TGCA	5 cut(s)	163, 383, 443, 455, 632
HpyF10VI	GCNNNNNNNGC	4 cut(s)	38, 116, 440, 638
HpyF3I	CTNAG	9 cut(s)	63, 144, 185, 265, 471, 521, 650, 690, 708
HpySE526I	ACGT	2 cut(s)	356, 685
Hsp92II	CATG	3 cut(s)	170, 455, 544
Kzo9I	GATC	4 cut(s)	294, 360, 415, 474
LmnI	GCTCC	3 cut(s)	102, 144, 517
LpnPI	CCDG	9 cut(s)	75, 218, 349, 354, 390, 461, 498, 589, 596
Lsp1109I	GCAGC	2 cut(s)	66, 602
LweI	GCATC	2 cut(s)	452, 588
MaeI	CTAG	1 cut(s)	386
MaeII	ACGT	2 cut(s)	356, 685
MaeIII	GTNAC	2 cut(s)	53, 369
MalI	GATC	4 cut(s)	296, 362, 417, 476
MboI	GATC	4 cut(s)	294, 360, 415, 474
MboII	GAAGA	3 cut(s)	236, 281, 712
MflI	RGATCY	1 cut(s)	474
MhlI	GDGCHC	4 cut(s)	43, 385, 522, 617
MluCI	AATT	7 cut(s)	156, 278, 456, 535, 544, 621, 660
MlyI	GAGTC	1 cut(s)	661
MnlI	CCTC	4 cut(s)	110, 153, 173, 545
Mph1103I	ATGCAT	1 cut(s)	445
MseI	TTAA	1 cut(s)	530
MslI	CAYNNNNRTG	2 cut(s)	171, 484
MspA1I	CMGCKG	1 cut(s)	27
MwoI	GCNNNNNNNGC	4 cut(s)	38, 116, 440, 638
NdeII	GATC	4 cut(s)	294, 360, 415, 474
NlaIII	CATG	3 cut(s)	170, 455, 544
NmeAIII	GCCGAG	1 cut(s)	81
NmuCI	GTSAC	1 cut(s)	53
NsiI	ATGCAT	1 cut(s)	445
NspI	RCATGY	1 cut(s)	455
PaeI	GCATGC	1 cut(s)	455
PagI	TCATGA	1 cut(s)	540
PfeI	GAWTC	1 cut(s)	15
PflMI	CCANNNNNTGG	1 cut(s)	343
PkrI	GCNGC	3 cut(s)	81, 121, 592
PleI	GAGTC	1 cut(s)	660
PmaCI	CACGTG	1 cut(s)	686
PmlI	CACGTG	1 cut(s)	686
PpsI	GAGTC	1 cut(s)	660
Ppu21I	YACGTR	1 cut(s)	686
PpuMI	RGGWCCY	1 cut(s)	7
Psp124BI	GAGCTC	1 cut(s)	522
Psp5II	RGGWCCY	1 cut(s)	7
PspCI	CACGTG	1 cut(s)	686
PspFI	CCCAGC	2 cut(s)	447, 610
PspPI	GGNCC	1 cut(s)	7
PspPPI	RGGWCCY	1 cut(s)	7
PsuI	RGATCY	1 cut(s)	474
PvuII	CAGCTG	1 cut(s)	27
RsaI	GTAC	2 cut(s)	221, 511
RsaNI	GTAC	2 cut(s)	220, 510
RseI	CAYNNNNRTG	2 cut(s)	171, 484
SacI	GAGCTC	1 cut(s)	522
SaqAI	TTAA	1 cut(s)	530
SatI	GCNGC	3 cut(s)	80, 120, 591
Sau3AI	GATC	4 cut(s)	294, 360, 415, 474
Sau96I	GGNCC	1 cut(s)	7
SchI	GAGTC	1 cut(s)	661
SduI	GDGCHC	4 cut(s)	43, 385, 522, 617
SfaNI	GCATC	2 cut(s)	452, 588
SinI	GGWCC	1 cut(s)	7
SmiMI	CAYNNNNRTG	2 cut(s)	171, 484
SphI	GCATGC	1 cut(s)	455
Sse9I	AATT	7 cut(s)	156, 278, 456, 535, 544, 621, 660
SsiI	CCGC	1 cut(s)	120
SspI	AATATT	1 cut(s)	309
SspMI	CTAG	1 cut(s)	386
SstI	GAGCTC	1 cut(s)	522
StyI	CCWWGG	1 cut(s)	10
TaaI	ACNGT	3 cut(s)	53, 133, 380
TaiI	ACGT	2 cut(s)	359, 688
TaqI	TCGA	2 cut(s)	18, 414
TasI	AATT	7 cut(s)	156, 278, 456, 535, 544, 621, 660
TatI	WGTACW	1 cut(s)	509
TauI	GCSGC	1 cut(s)	122
TfiI	GAWTC	1 cut(s)	15
Tru1I	TTAA	1 cut(s)	530
Tru9I	TTAA	1 cut(s)	530
TscAI	CASTG	1 cut(s)	136
TseFI	GTSAC	1 cut(s)	53
TseI	GCWGC	2 cut(s)	79, 590
Tsp45I	GTSAC	1 cut(s)	53
TspDTI	ATGAA	6 cut(s)	17, 167, 236, 365, 529, 557
TspRI	CASTG	1 cut(s)	136
Van91I	CCANNNNNTGG	1 cut(s)	343
VneI	GTGCAC	1 cut(s)	381
VpaK11BI	GGWCC	1 cut(s)	7
XapI	RAATTY	2 cut(s)	156, 544
XceI	RCATGY	1 cut(s)	455
XspI	CTAG	1 cut(s)	386
Zsp2I	ATGCAT	1 cut(s)	445

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.