Belongs to the peptidase C1 family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G47128 AT5G43060 |
| fragaria_vesca | FvH4_2g33910 |
| malus_domestica | MD08G1065500.v1.1 MD08G1093900.v1.1 MD15G1078300.v1.1 |
| prunus_persica | Prupe.1G431000_v2.0.a1 |
| pyrus_communis | pycom08g07660 pycom15g07310 |
| rosa_chinensis | RchiOBHm_Chr6g0308501 |
| rosa_laevigata | RLG00000010637 |
| rosa_multiflora | Rmu_sc0020439.1_g000004 |
| rosa_roxburghii | Rroxscaffold_7G00160070 |
| rosa_rugosa | Rorug06G0367300 |
| rosa_samantha | Rh6AG477200 Rh6BG487400 Rh6DG478500 |
| rosa_wichuraiana | Rw6G041640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1190 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 104, 1292 |
| Acc36I | ACCTGC | 1 cut(s) | 1190 |
| AccB1I | GGYRCC | 2 cut(s) | 347, 1244 |
| AccI | GTMKAC | 1 cut(s) | 23 |
| AccII | CGCG | 3 cut(s) | 47, 360, 410 |
| AciI | CCGC | 5 cut(s) | 32, 358, 495, 1035, 1371 |
| AclWI | GGATC | 2 cut(s) | 9, 545 |
| AcoI | YGGCCR | 1 cut(s) | 174 |
| AcsI | RAATTY | 1 cut(s) | 970 |
| AcuI | CTGAAG | 1 cut(s) | 510 |
| AcvI | CACGTG | 1 cut(s) | 416 |
| AcyI | GRCGYC | 1 cut(s) | 1245 |
| AfaI | GTAC | 5 cut(s) | 11, 251, 329, 407, 1131 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 64, 419, 447, 701, 1106, 1241 |
| AflIII | ACRYGT | 2 cut(s) | 75, 415 |
| AgeI | ACCGGT | 3 cut(s) | 300, 330, 402 |
| AgsI | TTSAA | 4 cut(s) | 235, 799, 839, 1360 |
| AjnI | CCWGG | 3 cut(s) | 342, 1023, 1105 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 206, 238 |
| AluBI | AGCT | 7 cut(s) | 129, 282, 289, 492, 547, 586, 987 |
| AluI | AGCT | 7 cut(s) | 129, 282, 289, 492, 547, 586, 987 |
| Alw26I | GTCTC | 2 cut(s) | 211, 1128 |
| AlwI | GGATC | 2 cut(s) | 9, 545 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 586 |
| AoxI | GGCC | 2 cut(s) | 174, 1087 |
| ApeKI | GCWGC | 4 cut(s) | 492, 984, 1185, 1275 |
| ApoI | RAATTY | 1 cut(s) | 970 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 93, 125 |
| AsiGI | ACCGGT | 3 cut(s) | 300, 330, 402 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 302, 771 |
| AspLEI | GCGC | 4 cut(s) | 362, 412, 1247, 1365 |
| AspS9I | GGNCC | 4 cut(s) | 5, 333, 907, 1109 |
| AsuHPI | GGTGA | 2 cut(s) | 46, 160 |
| AvaII | GGWCC | 4 cut(s) | 5, 333, 907, 1109 |
| AxyI | CCTNAGG | 1 cut(s) | 245 |
| BaeGI | GKGCMC | 1 cut(s) | 350 |
| BalI | TGGCCA | 1 cut(s) | 176 |
| BanI | GGYRCC | 2 cut(s) | 347, 1244 |
| BbrPI | CACGTG | 1 cut(s) | 416 |
| BbvCI | CCTCAGC | 1 cut(s) | 278 |
| BbvI | GCAGC | 4 cut(s) | 479, 996, 1172, 1262 |
| BccI | CCATC | 3 cut(s) | 482, 1006, 1120 |
| BceAI | ACGGC | 1 cut(s) | 199 |
| BciT130I | CCWGG | 3 cut(s) | 344, 1025, 1107 |
| BcoDI | GTCTC | 2 cut(s) | 211, 1128 |
| BfaI | CTAG | 1 cut(s) | 548 |
| BfmI | CTRYAG | 1 cut(s) | 727 |
| BfoI | RGCGCY | 1 cut(s) | 1248 |
| BfuAI | ACCTGC | 1 cut(s) | 1190 |
| BglII | AGATCT | 2 cut(s) | 228, 559 |
| BisI | GCNGC | 4 cut(s) | 493, 985, 1186, 1276 |
| BlsI | GCNGC | 4 cut(s) | 494, 986, 1187, 1277 |
| Bme1390I | CCNGG | 3 cut(s) | 344, 1025, 1107 |
| Bme18I | GGWCC | 4 cut(s) | 5, 333, 907, 1109 |
| BmgT120I | GGNCC | 4 cut(s) | 5, 333, 907, 1109 |
| BmiI | GGNNCC | 5 cut(s) | 6, 224, 349, 1246, 1315 |
| BmrFI | CCNGG | 3 cut(s) | 344, 1025, 1107 |
| BmrI | ACTGGG | 3 cut(s) | 1286, 1352, 1393 |
| BmsI | GCATC | 2 cut(s) | 608, 700 |
| BmuI | ACTGGG | 3 cut(s) | 1286, 1352, 1393 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 549, 581 |
| BpmI | CTGGAG | 1 cut(s) | 151 |
| Bpu10I | CCTNAGC | 1 cut(s) | 278 |
| BpuEI | CTTGAG | 1 cut(s) | 1259 |
| BsaAI | YACGTR | 1 cut(s) | 416 |
| BsaHI | GRCGYC | 1 cut(s) | 1245 |
| BsaJI | CCNNGG | 7 cut(s) | 27, 343, 484, 741, 910, 1024, 1105 |
| BsaWI | WCCGGW | 6 cut(s) | 300, 330, 384, 402, 554, 1126 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 137, 167, 206, 236 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 64, 419, 447, 701, 1106, 1241 |
| Bse118I | RCCGGY | 3 cut(s) | 300, 330, 402 |
| Bse1I | ACTGG | 6 cut(s) | 859, 962, 1076, 1292, 1347, 1388 |
| Bse21I | CCTNAGG | 1 cut(s) | 245 |
| Bse3DI | GCAATG | 3 cut(s) | 628, 670, 1065 |
| BseBI | CCWGG | 3 cut(s) | 344, 1025, 1107 |
| BseDI | CCNNGG | 7 cut(s) | 27, 343, 484, 741, 910, 1024, 1105 |
| BseGI | GGATG | 3 cut(s) | 623, 1017, 1232 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 64, 419, 447, 701, 1106, 1241 |
| BseMI | GCAATG | 3 cut(s) | 628, 670, 1065 |
| BseMII | CTCAG | 6 cut(s) | 259, 292, 377, 567, 1161, 1316 |
| BseNI | ACTGG | 6 cut(s) | 859, 962, 1076, 1292, 1347, 1388 |
| BseRI | GAGGAG | 4 cut(s) | 158, 385, 554, 1107 |
| BseSI | GKGCMC | 1 cut(s) | 350 |
| BseXI | GCAGC | 4 cut(s) | 479, 996, 1172, 1262 |
| BseYI | CCCAGC | 2 cut(s) | 504, 987 |
| Bsh1236I | CGCG | 3 cut(s) | 47, 360, 410 |
| Bsh1285I | CGRYCG | 2 cut(s) | 36, 403 |
| BshFI | GGCC | 2 cut(s) | 176, 1089 |
| BshNI | GGYRCC | 2 cut(s) | 347, 1244 |
| BshTI | ACCGGT | 3 cut(s) | 300, 330, 402 |
| BsiEI | CGRYCG | 2 cut(s) | 36, 403 |
| BsiSI | CCGG | 6 cut(s) | 301, 331, 385, 403, 555, 1127 |
| BslFI | GGGAC | 2 cut(s) | 18, 900 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 64, 419, 447, 701, 1106, 1241 |
| BsmAI | GTCTC | 2 cut(s) | 211, 1128 |
| BsmBI | CGTCTC | 2 cut(s) | 211, 1128 |
| BsmFI | GGGAC | 2 cut(s) | 18, 900 |
| BsmI | GAATGC | 1 cut(s) | 509 |
| BsnI | GGCC | 2 cut(s) | 176, 1089 |
| Bsp1286I | GDGCHC | 1 cut(s) | 350 |
| Bsp143I | GATC | 7 cut(s) | 14, 48, 81, 228, 310, 537, 559 |
| Bsp19I | CCATGG | 2 cut(s) | 27, 910 |
| Bsp68I | TCGCGA | 1 cut(s) | 47 |
| BspACI | CCGC | 5 cut(s) | 32, 358, 495, 1035, 1371 |
| BspANI | GGCC | 2 cut(s) | 176, 1089 |
| BspCNI | CTCAG | 6 cut(s) | 258, 291, 376, 568, 1162, 1317 |
| BspFNI | CGCG | 3 cut(s) | 47, 360, 410 |
| BspLI | GGNNCC | 5 cut(s) | 6, 224, 349, 1246, 1315 |
| BspMI | ACCTGC | 1 cut(s) | 1190 |
| BspPI | GGATC | 2 cut(s) | 9, 545 |
| BspT107I | GGYRCC | 2 cut(s) | 347, 1244 |
| BsrDI | GCAATG | 3 cut(s) | 628, 670, 1065 |
| BsrFI | RCCGGY | 3 cut(s) | 300, 330, 402 |
| BsrI | ACTGG | 6 cut(s) | 859, 962, 1076, 1292, 1347, 1388 |
| BssAI | RCCGGY | 3 cut(s) | 300, 330, 402 |
| BssECI | CCNNGG | 7 cut(s) | 27, 343, 484, 741, 910, 1024, 1105 |
| BssMI | GATC | 7 cut(s) | 14, 48, 81, 228, 310, 537, 559 |
| BssNI | GRCGYC | 1 cut(s) | 1245 |
| BssT1I | CCWWGG | 4 cut(s) | 27, 484, 741, 910 |
| Bst2UI | CCWGG | 3 cut(s) | 344, 1025, 1107 |
| Bst4CI | ACNGT | 6 cut(s) | 9, 222, 596, 680, 891, 922 |
| Bst6I | CTCTTC | 4 cut(s) | 47, 362, 529, 678 |
| BstACI | GRCGYC | 1 cut(s) | 1245 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1182 |
| BstBAI | YACGTR | 1 cut(s) | 416 |
| BstC8I | GCNNGC | 3 cut(s) | 174, 1367, 1371 |
| BstDEI | CTNAG | 7 cut(s) | 245, 270, 278, 363, 576, 1170, 1325 |
| BstDSI | CCRYGG | 2 cut(s) | 27, 910 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 699 |
| BstF5I | GGATG | 3 cut(s) | 623, 1017, 1232 |
| BstFNI | CGCG | 3 cut(s) | 47, 360, 410 |
| BstH2I | RGCGCY | 1 cut(s) | 1248 |
| BstHHI | GCGC | 4 cut(s) | 362, 412, 1247, 1365 |
| BstKTI | GATC | 7 cut(s) | 17, 51, 84, 231, 313, 540, 562 |
| BstMAI | GTCTC | 2 cut(s) | 211, 1128 |
| BstMBI | GATC | 7 cut(s) | 14, 48, 81, 228, 310, 537, 559 |
| BstMCI | CGRYCG | 2 cut(s) | 36, 403 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 178, 501, 1064, 1182, 1251, 1407 |
| BstNI | CCWGG | 3 cut(s) | 344, 1025, 1107 |
| BstNSI | RCATGY | 3 cut(s) | 79, 1254, 1369 |
| BstSCI | CCNGG | 3 cut(s) | 342, 1023, 1105 |
| BstSFI | CTRYAG | 1 cut(s) | 727 |
| BstSLI | GKGCMC | 1 cut(s) | 350 |
| BstUI | CGCG | 3 cut(s) | 47, 360, 410 |
| BstV1I | GCAGC | 4 cut(s) | 479, 996, 1172, 1262 |
| BstX2I | RGATCY | 3 cut(s) | 14, 228, 559 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 343 |
| BstYI | RGATCY | 3 cut(s) | 14, 228, 559 |
| Bsu36I | CCTNAGG | 1 cut(s) | 245 |
| BsuRI | GGCC | 2 cut(s) | 176, 1089 |
| BtgI | CCRYGG | 2 cut(s) | 27, 910 |
| BtsCI | GGATG | 3 cut(s) | 623, 1017, 1232 |
| BtsIMutI | CAGTG | 4 cut(s) | 534, 685, 1340, 1381 |
| BtuMI | TCGCGA | 1 cut(s) | 47 |
| BveI | ACCTGC | 1 cut(s) | 1190 |
| Cac8I | GCNNGC | 3 cut(s) | 174, 1367, 1371 |
| CaiI | CAGNNNCTG | 1 cut(s) | 586 |
| CfoI | GCGC | 4 cut(s) | 362, 412, 1247, 1365 |
| Cfr10I | RCCGGY | 3 cut(s) | 300, 330, 402 |
| Cfr13I | GGNCC | 4 cut(s) | 5, 333, 907, 1109 |
| Csp6I | GTAC | 5 cut(s) | 10, 250, 328, 406, 1130 |
| CspAI | ACCGGT | 3 cut(s) | 300, 330, 402 |
| CviAII | CATG | 7 cut(s) | 28, 76, 911, 975, 1040, 1251, 1366 |
| CviQI | GTAC | 5 cut(s) | 10, 250, 328, 406, 1130 |
| DdeI | CTNAG | 7 cut(s) | 245, 270, 278, 363, 576, 1170, 1325 |
| DinI | GGCGCC | 1 cut(s) | 1246 |
| DpnI | GATC | 7 cut(s) | 16, 50, 83, 230, 312, 539, 561 |
| DpnII | GATC | 7 cut(s) | 14, 48, 81, 228, 310, 537, 559 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 104, 1292 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 104, 1292 |
| EaeI | YGGCCR | 1 cut(s) | 174 |
| Eam1104I | CTCTTC | 4 cut(s) | 47, 362, 529, 678 |
| EarI | CTCTTC | 4 cut(s) | 47, 362, 529, 678 |
| Eco130I | CCWWGG | 4 cut(s) | 27, 484, 741, 910 |
| Eco47I | GGWCC | 4 cut(s) | 5, 333, 907, 1109 |
| Eco57I | CTGAAG | 1 cut(s) | 510 |
| Eco72I | CACGTG | 1 cut(s) | 416 |
| Eco81I | CCTNAGG | 1 cut(s) | 245 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 699 |
| EcoRII | CCWGG | 3 cut(s) | 342, 1023, 1105 |
| EcoT14I | CCWWGG | 4 cut(s) | 27, 484, 741, 910 |
| EgeI | GGCGCC | 1 cut(s) | 1246 |
| EheI | GGCGCC | 1 cut(s) | 1246 |
| ErhI | CCWWGG | 4 cut(s) | 27, 484, 741, 910 |
| Esp3I | CGTCTC | 2 cut(s) | 211, 1128 |
| FaeI | CATG | 7 cut(s) | 31, 79, 914, 978, 1043, 1254, 1369 |
| FaqI | GGGAC | 2 cut(s) | 18, 900 |
| FatI | CATG | 7 cut(s) | 27, 75, 910, 974, 1039, 1250, 1365 |
| FauI | CCCGC | 3 cut(s) | 365, 488, 1378 |
| FblI | GTMKAC | 1 cut(s) | 23 |
| Fnu4HI | GCNGC | 4 cut(s) | 493, 985, 1186, 1276 |
| FokI | GGATG | 3 cut(s) | 630, 1024, 1239 |
| Fsp4HI | GCNGC | 4 cut(s) | 493, 985, 1186, 1276 |
| FspBI | CTAG | 1 cut(s) | 548 |
| GlaI | GCGC | 4 cut(s) | 361, 411, 1246, 1364 |
| GluI | GCNGC | 4 cut(s) | 493, 985, 1186, 1276 |
| GsaI | CCCAGC | 2 cut(s) | 508, 991 |
| GsuI | CTGGAG | 1 cut(s) | 151 |
| HaeII | RGCGCY | 1 cut(s) | 1248 |
| HaeIII | GGCC | 2 cut(s) | 176, 1089 |
| HapII | CCGG | 6 cut(s) | 301, 331, 385, 403, 555, 1127 |
| HhaI | GCGC | 4 cut(s) | 362, 412, 1247, 1365 |
| Hin1I | GRCGYC | 1 cut(s) | 1245 |
| Hin1II | CATG | 7 cut(s) | 31, 79, 914, 978, 1043, 1254, 1369 |
| Hin6I | GCGC | 4 cut(s) | 360, 410, 1245, 1363 |
| HinP1I | GCGC | 4 cut(s) | 360, 410, 1245, 1363 |
| HincII | GTYRAC | 4 cut(s) | 24, 469, 592, 1322 |
| HindII | GTYRAC | 4 cut(s) | 24, 469, 592, 1322 |
| HinfI | GANTC | 3 cut(s) | 116, 425, 437 |
| HpaII | CCGG | 6 cut(s) | 301, 331, 385, 403, 555, 1127 |
| HphI | GGTGA | 2 cut(s) | 46, 160 |
| Hpy166II | GTNNAC | 6 cut(s) | 24, 336, 469, 592, 1235, 1322 |
| Hpy188I | TCNGA | 4 cut(s) | 113, 297, 366, 577 |
| Hpy188III | TCNNGA | 6 cut(s) | 46, 71, 226, 1009, 1081, 1169 |
| Hpy8I | GTNNAC | 6 cut(s) | 24, 336, 469, 592, 1235, 1322 |
| Hpy99I | CGWCG | 7 cut(s) | 25, 67, 98, 110, 113, 260, 326 |
| HpyAV | CCTTC | 9 cut(s) | 158, 205, 448, 527, 608, 655, 833, 992, 1345 |
| HpyCH4III | ACNGT | 6 cut(s) | 9, 222, 596, 680, 891, 922 |
| HpyCH4IV | ACGT | 2 cut(s) | 105, 415 |
| HpyCH4V | TGCA | 6 cut(s) | 621, 779, 1058, 1205, 1299, 1310 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 178, 501, 1064, 1182, 1251, 1407 |
| HpyF3I | CTNAG | 7 cut(s) | 245, 270, 278, 363, 576, 1170, 1325 |
| HpySE526I | ACGT | 2 cut(s) | 105, 415 |
| Hsp92I | GRCGYC | 1 cut(s) | 1245 |
| Hsp92II | CATG | 7 cut(s) | 31, 79, 914, 978, 1043, 1254, 1369 |
| HspAI | GCGC | 4 cut(s) | 360, 410, 1245, 1363 |
| KasI | GGCGCC | 1 cut(s) | 1244 |
| Kzo9I | GATC | 7 cut(s) | 14, 48, 81, 228, 310, 537, 559 |
| LmnI | GCTCC | 4 cut(s) | 489, 583, 1015, 1407 |
| Lsp1109I | GCAGC | 4 cut(s) | 479, 996, 1172, 1262 |
| LweI | GCATC | 2 cut(s) | 608, 700 |
| MaeI | CTAG | 1 cut(s) | 548 |
| MaeII | ACGT | 2 cut(s) | 105, 415 |
| MaeIII | GTNAC | 6 cut(s) | 550, 596, 719, 916, 1019, 1283 |
| MalI | GATC | 7 cut(s) | 16, 50, 83, 230, 312, 539, 561 |
| MboI | GATC | 7 cut(s) | 14, 48, 81, 228, 310, 537, 559 |
| MboII | GAAGA | 7 cut(s) | 34, 43, 223, 379, 516, 695, 779 |
| MfeI | CAATTG | 2 cut(s) | 822, 1389 |
| MflI | RGATCY | 3 cut(s) | 14, 228, 559 |
| MhlI | GDGCHC | 1 cut(s) | 350 |
| MlsI | TGGCCA | 1 cut(s) | 176 |
| MluCI | AATT | 7 cut(s) | 672, 822, 868, 970, 1053, 1153, 1389 |
| MluNI | TGGCCA | 1 cut(s) | 176 |
| Mly113I | GGCGCC | 1 cut(s) | 1245 |
| MlyI | GAGTC | 3 cut(s) | 125, 419, 431 |
| MmeI | TCCRAC | 3 cut(s) | 91, 342, 405 |
| Mox20I | TGGCCA | 1 cut(s) | 176 |
| MroXI | GAANNNNTTC | 2 cut(s) | 302, 771 |
| MscI | TGGCCA | 1 cut(s) | 176 |
| MseI | TTAA | 1 cut(s) | 1417 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1010 |
| Msp20I | TGGCCA | 1 cut(s) | 176 |
| MspA1I | CMGCKG | 1 cut(s) | 987 |
| MspI | CCGG | 6 cut(s) | 301, 331, 385, 403, 555, 1127 |
| MspR9I | CCNGG | 3 cut(s) | 344, 1025, 1107 |
| MunI | CAATTG | 2 cut(s) | 822, 1389 |
| Mva1269I | GAATGC | 1 cut(s) | 509 |
| MvaI | CCWGG | 3 cut(s) | 344, 1025, 1107 |
| MvnI | CGCG | 3 cut(s) | 47, 360, 410 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 178, 501, 1064, 1182, 1251, 1407 |
| NarI | GGCGCC | 1 cut(s) | 1245 |
| NcoI | CCATGG | 2 cut(s) | 27, 910 |
| NdeII | GATC | 7 cut(s) | 14, 48, 81, 228, 310, 537, 559 |
| NlaIII | CATG | 7 cut(s) | 31, 79, 914, 978, 1043, 1254, 1369 |
| NlaIV | GGNNCC | 5 cut(s) | 6, 224, 349, 1246, 1315 |
| NmuCI | GTSAC | 4 cut(s) | 550, 596, 719, 1283 |
| NruI | TCGCGA | 1 cut(s) | 47 |
| NspI | RCATGY | 3 cut(s) | 79, 1254, 1369 |
| PaeI | GCATGC | 1 cut(s) | 1369 |
| PaqCI | CACCTGC | 1 cut(s) | 1190 |
| PciI | ACATGT | 1 cut(s) | 75 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 102 |
| PctI | GAATGC | 1 cut(s) | 509 |
| PdmI | GAANNNNTTC | 2 cut(s) | 302, 771 |
| PinAI | ACCGGT | 3 cut(s) | 300, 330, 402 |
| PkrI | GCNGC | 4 cut(s) | 494, 986, 1187, 1277 |
| PleI | GAGTC | 3 cut(s) | 124, 419, 431 |
| PluTI | GGCGCC | 1 cut(s) | 1248 |
| PmaCI | CACGTG | 1 cut(s) | 416 |
| PmlI | CACGTG | 1 cut(s) | 416 |
| PpsI | GAGTC | 3 cut(s) | 124, 419, 431 |
| Ppu21I | YACGTR | 1 cut(s) | 416 |
| PscI | ACATGT | 1 cut(s) | 75 |
| Psp6I | CCWGG | 3 cut(s) | 342, 1023, 1105 |
| PspCI | CACGTG | 1 cut(s) | 416 |
| PspFI | CCCAGC | 2 cut(s) | 504, 987 |
| PspGI | CCWGG | 3 cut(s) | 342, 1023, 1105 |
| PspN4I | GGNNCC | 5 cut(s) | 6, 224, 349, 1246, 1315 |
| PspPI | GGNCC | 4 cut(s) | 5, 333, 907, 1109 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 266, 298 |
| PstNI | CAGNNNCTG | 1 cut(s) | 586 |
| PsuI | RGATCY | 3 cut(s) | 14, 228, 559 |
| PvuII | CAGCTG | 1 cut(s) | 987 |
| RruI | TCGCGA | 1 cut(s) | 47 |
| RsaI | GTAC | 5 cut(s) | 11, 251, 329, 407, 1131 |
| RsaNI | GTAC | 5 cut(s) | 10, 250, 328, 406, 1130 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1010 |
| SalI | GTCGAC | 1 cut(s) | 22 |
| SaqAI | TTAA | 1 cut(s) | 1417 |
| SatI | GCNGC | 4 cut(s) | 493, 985, 1186, 1276 |
| Sau3AI | GATC | 7 cut(s) | 14, 48, 81, 228, 310, 537, 559 |
| Sau96I | GGNCC | 4 cut(s) | 5, 333, 907, 1109 |
| SchI | GAGTC | 3 cut(s) | 125, 419, 431 |
| ScrFI | CCNGG | 3 cut(s) | 344, 1025, 1107 |
| SduI | GDGCHC | 1 cut(s) | 350 |
| SfaNI | GCATC | 2 cut(s) | 608, 700 |
| SfcI | CTRYAG | 1 cut(s) | 727 |
| SfoI | GGCGCC | 1 cut(s) | 1246 |
| SinI | GGWCC | 4 cut(s) | 5, 333, 907, 1109 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1010 |
| SmlI | CTYRAG | 1 cut(s) | 1238 |
| SmoI | CTYRAG | 1 cut(s) | 1238 |
| SphI | GCATGC | 1 cut(s) | 1369 |
| Sse9I | AATT | 7 cut(s) | 672, 822, 868, 970, 1053, 1153, 1389 |
| SsiI | CCGC | 5 cut(s) | 32, 358, 495, 1035, 1371 |
| SspDI | GGCGCC | 1 cut(s) | 1244 |
| SspMI | CTAG | 1 cut(s) | 548 |
| StyD4I | CCNGG | 3 cut(s) | 342, 1023, 1105 |
| StyI | CCWWGG | 4 cut(s) | 27, 484, 741, 910 |
| TaaI | ACNGT | 6 cut(s) | 9, 222, 596, 680, 891, 922 |
| TaiI | ACGT | 2 cut(s) | 108, 418 |
| TaqI | TCGA | 6 cut(s) | 23, 80, 119, 125, 255, 648 |
| TaqII | GACCGA | 1 cut(s) | 281 |
| TasI | AATT | 7 cut(s) | 672, 822, 868, 970, 1053, 1153, 1389 |
| Tru1I | TTAA | 1 cut(s) | 1417 |
| Tru9I | TTAA | 1 cut(s) | 1417 |
| TscAI | CASTG | 4 cut(s) | 534, 685, 1347, 1388 |
| TseFI | GTSAC | 4 cut(s) | 550, 596, 719, 1283 |
| TseI | GCWGC | 4 cut(s) | 492, 984, 1185, 1275 |
| Tsp45I | GTSAC | 4 cut(s) | 550, 596, 719, 1283 |
| TspDTI | ATGAA | 4 cut(s) | 627, 643, 780, 963 |
| TspGWI | ACGGA | 3 cut(s) | 213, 430, 1110 |
| TspRI | CASTG | 4 cut(s) | 534, 685, 1347, 1388 |
| VpaK11BI | GGWCC | 4 cut(s) | 5, 333, 907, 1109 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 699 |
| XapI | RAATTY | 1 cut(s) | 970 |
| XceI | RCATGY | 3 cut(s) | 79, 1254, 1369 |
| XmiI | GTMKAC | 1 cut(s) | 23 |
| XmnI | GAANNNNTTC | 2 cut(s) | 302, 771 |
| XspI | CTAG | 1 cut(s) | 548 |