Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0012766

Physical Location & Seq

Genomic Coordinates Reverse (-)

3102660 .. 3105517

Gene Structure 2858 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00160070.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1359 bp

ATGCACACCCCCACCTCTCCCACTTTCTCACACACATTCATTTCTCCTCTCCTCTCCTCTCCTCTCCCCTCCCAAACAAGACCGCTCTTCCTCCTCCAAACCATGGGTCCGTACCGATCATCATCGTCGGTCATGGCGATTCTCTTCCTCGCCATGTTCGCCTTGTCCTCCGCCGCCGACATGTCGATCATCGCCTACGACAACAGCCACGCCTCCTCTGCCAGCTGGAGGACTGACGAGGAGGTGATGTCACTGTACGAGGGGTGGTTGGCCAAGCACGGCAAGTCCTACAACGGCTTGGGAGAGAAGGAGAAGCGCTTCCAGATCTTCAAGGACAACCTCAGGTTCATCGACGACCACAACGCTCTCAACCTCAGCTACAAGCTCGGTCTGACTAAGTTCGCCGATCTGTCCAACGAGGAGTACCGGTCAACGTACCTAGGTACCAAGCCCCGCGCTCTGAATAGGCTCTCCAAGACAAAGAGCGACCGGTACGTGCCACGTGTCGGCGATCAGTTGCCTGACGCTGTTGATTGGAGGAAGGAAGGCGTCGTCAACCCTGTCAAAGACCAAGGCCAGTGTGTGTTTGGACTTTTTGGTTTGCTTGGTGATAGAGCAAAGGAGTTGGTTGATTGTGATAAAACTTATAATGAAGGATGCAATGGAGGGCTCATGGACTATGCCTTCGAGTTCATCATTAACAATGGCGGCATAGACAGTGAAGATGACTATCCTTACAAAGGATATGATTCCACATGTGACACCTACAGGAAAAATGCCAAGGTGGTTTCAATTGATTCTTATGAAGATGTTCCCACATACGATGAGCAAGCGTTGAAAAAGGCTGTTGCCAATCAGCCAATTGCTGTTGCTATTGAAGGAGGAGGCAGGGAATTCCAGTTATATTCATCAGGTGTGTTTACCGGACGGTGTGGGACAGCACTAGACCATGGTGTTACTGTTGTGGGATACGGCACAGACCATGGCGTTGATTACTGGATTGTGAGGAATTCATGGGGTGCCAGCTGGGGAGAGGCAGGGTACATCAGAATGGAGCGTAATCTGGGTAACACTGCAACCGGGAAATGTGGAATTGCAATGGAGGCTTCTTACCCAGTCAAGGTAGGACAGAATCCCCCAAATCCTGGTCCATCTCCTCCATCTCCGATAAAACCTCCTCAGGCGCCACCTGCTGTGATGACCATTACAGTTGCTGCCCATCAGACTACCCCGTCTGCAATGTCAATGCAGGAACCTGTCAGCTGCAAGGGAAATCCAATGAGTGTGAAGGCATTGAAGCGCACACCGGCTAAAGCTCACTGGACTTTGGGAGGTGGTGCCAAGCACAGCAGTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0000932 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005911 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0010494 GO:0016787 GO:0019538 GO:0030054 GO:0030163 GO:0032991 GO:0035770 GO:0036464 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0050832 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0055044 GO:0070011 GO:0071704 GO:0098542 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Granulin Inhibitor_I29 Peptidase_C1

Protein Analysis

452

Amino Acids

49.35

Weight (kDa)

6.8

Isoelectric Point (pI)

36.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I29	PF08246	86 - 142	1.1e-19	Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1	PF00112	207 - 373	1.8e-58	Papain family cysteine protease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012766)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47128 AT5G43060
fragaria_vesca	FvH4_2g33910
malus_domestica	MD08G1065500.v1.1 MD08G1093900.v1.1 MD15G1078300.v1.1
prunus_persica	Prupe.1G431000_v2.0.a1
pyrus_communis	pycom08g07660 pycom15g07310
rosa_chinensis	RchiOBHm_Chr6g0308501
rosa_laevigata	RLG00000010637
rosa_multiflora	Rmu_sc0020439.1_g000004
rosa_roxburghii	Rroxscaffold_7G00160070
rosa_rugosa	Rorug06G0367300
rosa_samantha	Rh6AG477200 Rh6BG487400 Rh6DG478500
rosa_wichuraiana	Rw6G041640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	648
AarI	CACCTGC	1 cut(s)	1198
AasI	GACNNNNNNGTC	1 cut(s)	1231
Acc36I	ACCTGC	1 cut(s)	1198
Acc65I	GGTACC	1 cut(s)	443
AccB1I	GGYRCC	4 cut(s)	443, 1019, 1183, 1337
AccB7I	CCANNNNNTGG	2 cut(s)	103, 1145
AccBSI	CCGCTC	1 cut(s)	85
AccII	CGCG	1 cut(s)	456
AciI	CCGC	5 cut(s)	83, 171, 174, 454, 708
AcoI	YGGCCR	1 cut(s)	270
AcsI	RAATTY	2 cut(s)	893, 1009
AcvI	CACGTG	1 cut(s)	503
AcyI	GRCGYC	2 cut(s)	549, 1184
AfaI	GTAC	7 cut(s)	113, 257, 425, 437, 445, 494, 1043
AfeI	AGCGCT	1 cut(s)	317
AfiI	CCNNNNNNNGG	6 cut(s)	103, 228, 506, 740, 1120, 1145
AflIII	ACRYGT	3 cut(s)	180, 502, 755
AgeI	ACCGGT	2 cut(s)	426, 489
AgsI	TTSAA	5 cut(s)	331, 792, 838, 878, 1297
AjnI	CCWGG	1 cut(s)	1144
AluBI	AGCT	6 cut(s)	225, 378, 385, 1026, 1263, 1316
AluI	AGCT	6 cut(s)	225, 378, 385, 1026, 1263, 1316
AlwNI	CAGNNNCTG	1 cut(s)	1214
Aor51HI	AGCGCT	1 cut(s)	317
AoxI	GGCC	2 cut(s)	270, 574
ApeKI	GCWGC	2 cut(s)	1214, 1263
ApoI	RAATTY	2 cut(s)	893, 1009
ArsI	GACNNNNNNTTYG	4 cut(s)	91, 123, 668, 700
AsiGI	ACCGGT	2 cut(s)	426, 489
Asp700I	GAANNNNTTC	2 cut(s)	317, 810
Asp718I	GGTACC	1 cut(s)	443
AspA2I	CCTAGG	1 cut(s)	439
AspLEI	GCGC	4 cut(s)	318, 458, 1186, 1302
AspS9I	GGNCC	2 cut(s)	107, 1148
AsuC2I	CCSGG	1 cut(s)	1081
AsuHPI	GGTGA	2 cut(s)	256, 620
AvaII	GGWCC	2 cut(s)	107, 1148
AvrII	CCTAGG	1 cut(s)	439
AxyI	CCTNAGG	2 cut(s)	341, 1179
BaeI	ACNNNNGTAYC	2 cut(s)	427, 460
BalI	TGGCCA	1 cut(s)	272
BanI	GGYRCC	4 cut(s)	443, 1019, 1183, 1337
BanII	GRGCYC	1 cut(s)	672
BbrPI	CACGTG	1 cut(s)	503
BbvCI	CCTCAGC	1 cut(s)	374
BbvI	GCAGC	2 cut(s)	1201, 1250
BccI	CCATC	3 cut(s)	1159, 1168, 1227
BceAI	ACGGC	3 cut(s)	295, 310, 988
BciT130I	CCWGG	1 cut(s)	1146
BciVI	GTATCC	1 cut(s)	962
BcnI	CCSGG	1 cut(s)	1081
BfaI	CTAG	2 cut(s)	440, 944
BfmI	CTRYAG	1 cut(s)	766
BfoI	RGCGCY	2 cut(s)	319, 1187
BfuAI	ACCTGC	1 cut(s)	1198
BfuI	GTATCC	1 cut(s)	962
BglII	AGATCT	1 cut(s)	324
BisI	GCNGC	4 cut(s)	174, 709, 1215, 1264
BlnI	CCTAGG	1 cut(s)	439
BlsI	GCNGC	4 cut(s)	175, 710, 1216, 1265
Bme1390I	CCNGG	2 cut(s)	1081, 1146
Bme18I	GGWCC	2 cut(s)	107, 1148
BmgT120I	GGNCC	2 cut(s)	107, 1148
BmiI	GGNNCC	6 cut(s)	108, 445, 1021, 1185, 1254, 1339
BmrFI	CCNGG	2 cut(s)	1081, 1146
BmrI	ACTGGG	1 cut(s)	1109
BmsI	GCATC	1 cut(s)	647
BmuI	ACTGGG	1 cut(s)	1109
BpmI	CTGGAG	1 cut(s)	247
Bpu10I	CCTNAGC	1 cut(s)	374
BpuMI	CCSGG	1 cut(s)	1081
BsaAI	YACGTR	2 cut(s)	496, 503
BsaBI	GATNNNNATC	2 cut(s)	121, 729
BsaHI	GRCGYC	2 cut(s)	549, 1184
BsaJI	CCNNGG	6 cut(s)	102, 439, 571, 780, 949, 982
BsaWI	WCCGGW	3 cut(s)	426, 489, 923
BsaXI	ACNNNNNCTCC	4 cut(s)	233, 263, 413, 443
Bsc4I	CCNNNNNNNGG	6 cut(s)	103, 228, 506, 740, 1120, 1145
Bse118I	RCCGGY	3 cut(s)	426, 489, 1306
Bse1I	ACTGG	5 cut(s)	577, 898, 1001, 1115, 1325
Bse21I	CCTNAGG	2 cut(s)	341, 1179
Bse3DI	GCAATG	3 cut(s)	667, 1104, 1245
Bse8I	GATNNNNATC	2 cut(s)	121, 729
BseBI	CCWGG	1 cut(s)	1146
BseDI	CCNNGG	6 cut(s)	102, 439, 571, 780, 949, 982
BseGI	GGATG	1 cut(s)	662
BseJI	GATNNNNATC	2 cut(s)	121, 729
BseLI	CCNNNNNNNGG	6 cut(s)	103, 228, 506, 740, 1120, 1145
BseMI	GCAATG	3 cut(s)	667, 1104, 1245
BseMII	CTCAG	3 cut(s)	355, 388, 1193
BseNI	ACTGG	5 cut(s)	577, 898, 1001, 1115, 1325
BseXI	GCAGC	2 cut(s)	1201, 1250
BseYI	CCCAGC	1 cut(s)	1026
Bsh1236I	CGCG	1 cut(s)	456
Bsh1285I	CGRYCG	1 cut(s)	490
BshFI	GGCC	2 cut(s)	272, 576
BshNI	GGYRCC	4 cut(s)	443, 1019, 1183, 1337
BshTI	ACCGGT	2 cut(s)	426, 489
BsiEI	CGRYCG	1 cut(s)	490
BsiSI	CCGG	5 cut(s)	427, 490, 924, 1080, 1307
BslFI	GGGAC	1 cut(s)	949
BslI	CCNNNNNNNGG	6 cut(s)	103, 228, 506, 740, 1120, 1145
BsmFI	GGGAC	1 cut(s)	949
BsnI	GGCC	2 cut(s)	272, 576
Bsp1286I	GDGCHC	1 cut(s)	672
Bsp143I	GATC	5 cut(s)	116, 186, 324, 406, 511
Bsp19I	CCATGG	3 cut(s)	102, 949, 982
BspACI	CCGC	5 cut(s)	83, 171, 174, 454, 708
BspANI	GGCC	2 cut(s)	272, 576
BspCNI	CTCAG	3 cut(s)	354, 387, 1192
BspFNI	CGCG	1 cut(s)	456
BspLI	GGNNCC	6 cut(s)	108, 445, 1021, 1185, 1254, 1339
BspMI	ACCTGC	1 cut(s)	1198
BspQI	GCTCTTC	1 cut(s)	92
BspT107I	GGYRCC	4 cut(s)	443, 1019, 1183, 1337
BsrBI	CCGCTC	1 cut(s)	85
BsrDI	GCAATG	3 cut(s)	667, 1104, 1245
BsrFI	RCCGGY	3 cut(s)	426, 489, 1306
BsrI	ACTGG	5 cut(s)	577, 898, 1001, 1115, 1325
BssAI	RCCGGY	3 cut(s)	426, 489, 1306
BssECI	CCNNGG	6 cut(s)	102, 439, 571, 780, 949, 982
BssMI	GATC	5 cut(s)	116, 186, 324, 406, 511
BssNI	GRCGYC	2 cut(s)	549, 1184
BssT1I	CCWWGG	6 cut(s)	102, 439, 571, 780, 949, 982
Bst2UI	CCWGG	1 cut(s)	1146
Bst4CI	ACNGT	5 cut(s)	255, 719, 930, 961, 1210
Bst6I	CTCTTC	2 cut(s)	92, 149
BstACI	GRCGYC	2 cut(s)	549, 1184
BstBAI	YACGTR	2 cut(s)	496, 503
BstC8I	GCNNGC	3 cut(s)	223, 831, 1024
BstDEI	CTNAG	4 cut(s)	341, 374, 396, 1179
BstDSI	CCRYGG	3 cut(s)	102, 949, 982
BstENI	CCTNNNNNAGG	1 cut(s)	738
BstF5I	GGATG	1 cut(s)	662
BstFNI	CGCG	1 cut(s)	456
BstH2I	RGCGCY	2 cut(s)	319, 1187
BstHHI	GCGC	4 cut(s)	318, 458, 1186, 1302
BstKTI	GATC	5 cut(s)	119, 189, 327, 409, 514
BstMBI	GATC	5 cut(s)	116, 186, 324, 406, 511
BstMCI	CGRYCG	1 cut(s)	490
BstMWI	GCNNNNNNNGC	4 cut(s)	158, 218, 1103, 1190
BstNI	CCWGG	1 cut(s)	1146
BstNSI	RCATGY	2 cut(s)	184, 759
BstSCI	CCNGG	2 cut(s)	1079, 1144
BstSFI	CTRYAG	1 cut(s)	766
BstUI	CGCG	1 cut(s)	456
BstV1I	GCAGC	2 cut(s)	1201, 1250
BstX2I	RGATCY	1 cut(s)	324
BstYI	RGATCY	1 cut(s)	324
Bsu36I	CCTNAGG	2 cut(s)	341, 1179
BsuI	GTATCC	1 cut(s)	962
BsuRI	GGCC	2 cut(s)	272, 576
BtgI	CCRYGG	3 cut(s)	102, 949, 982
BtgZI	GCGATG	1 cut(s)	175
BtsCI	GGATG	1 cut(s)	662
BtsI	GCAGTG	1 cut(s)	1071
BtsIMutI	CAGTG	5 cut(s)	251, 584, 724, 1071, 1318
BveI	ACCTGC	1 cut(s)	1198
Cac8I	GCNNGC	3 cut(s)	223, 831, 1024
CaiI	CAGNNNCTG	1 cut(s)	1214
CfoI	GCGC	4 cut(s)	318, 458, 1186, 1302
Cfr10I	RCCGGY	3 cut(s)	426, 489, 1306
Cfr13I	GGNCC	2 cut(s)	107, 1148
CseI	GACGC	2 cut(s)	533, 538
Csp6I	GTAC	7 cut(s)	112, 256, 424, 436, 444, 493, 1042
CspAI	ACCGGT	2 cut(s)	426, 489
CviAII	CATG	9 cut(s)	103, 133, 154, 181, 673, 756, 950, 983, 1014
CviQI	GTAC	7 cut(s)	112, 256, 424, 436, 444, 493, 1042
DdeI	CTNAG	4 cut(s)	341, 374, 396, 1179
DinI	GGCGCC	1 cut(s)	1185
DpnI	GATC	5 cut(s)	118, 188, 326, 408, 513
DpnII	GATC	5 cut(s)	116, 186, 324, 406, 511
DrdI	GACNNNNNNGTC	1 cut(s)	1231
DseDI	GACNNNNNNGTC	1 cut(s)	1231
EaeI	YGGCCR	1 cut(s)	270
Eam1104I	CTCTTC	2 cut(s)	92, 149
EarI	CTCTTC	2 cut(s)	92, 149
EciI	GGCGGA	1 cut(s)	160
Eco130I	CCWWGG	6 cut(s)	102, 439, 571, 780, 949, 982
Eco24I	GRGCYC	1 cut(s)	672
Eco47I	GGWCC	2 cut(s)	107, 1148
Eco47III	AGCGCT	1 cut(s)	317
Eco72I	CACGTG	1 cut(s)	503
Eco81I	CCTNAGG	2 cut(s)	341, 1179
EcoNI	CCTNNNNNAGG	1 cut(s)	738
EcoRI	GAATTC	2 cut(s)	893, 1009
EcoRII	CCWGG	1 cut(s)	1144
EcoT14I	CCWWGG	6 cut(s)	102, 439, 571, 780, 949, 982
EcoT38I	GRGCYC	1 cut(s)	672
EgeI	GGCGCC	1 cut(s)	1185
EheI	GGCGCC	1 cut(s)	1185
ErhI	CCWWGG	6 cut(s)	102, 439, 571, 780, 949, 982
FaeI	CATG	9 cut(s)	106, 136, 157, 184, 676, 759, 953, 986, 1017
FaqI	GGGAC	1 cut(s)	949
FatI	CATG	9 cut(s)	102, 132, 153, 180, 672, 755, 949, 982, 1013
FauI	CCCGC	1 cut(s)	461
Fnu4HI	GCNGC	4 cut(s)	174, 709, 1215, 1264
FokI	GGATG	1 cut(s)	669
FriOI	GRGCYC	1 cut(s)	672
Fsp4HI	GCNGC	4 cut(s)	174, 709, 1215, 1264
FspBI	CTAG	2 cut(s)	440, 944
GlaI	GCGC	4 cut(s)	317, 457, 1185, 1301
GluI	GCNGC	4 cut(s)	174, 709, 1215, 1264
GsaI	CCCAGC	1 cut(s)	1030
GsuI	CTGGAG	1 cut(s)	247
HaeII	RGCGCY	2 cut(s)	319, 1187
HaeIII	GGCC	2 cut(s)	272, 576
HapII	CCGG	5 cut(s)	427, 490, 924, 1080, 1307
HgaI	GACGC	2 cut(s)	533, 538
HhaI	GCGC	4 cut(s)	318, 458, 1186, 1302
Hin1I	GRCGYC	2 cut(s)	549, 1184
Hin1II	CATG	9 cut(s)	106, 136, 157, 184, 676, 759, 953, 986, 1017
Hin6I	GCGC	4 cut(s)	316, 456, 1184, 1300
HinP1I	GCGC	4 cut(s)	316, 456, 1184, 1300
HincII	GTYRAC	2 cut(s)	432, 556
HindII	GTYRAC	2 cut(s)	432, 556
HinfI	GANTC	4 cut(s)	139, 749, 797, 1132
HpaII	CCGG	5 cut(s)	427, 490, 924, 1080, 1307
HphI	GGTGA	2 cut(s)	256, 620
Hpy166II	GTNNAC	3 cut(s)	432, 556, 921
Hpy188I	TCNGA	5 cut(s)	393, 462, 1049, 1167, 1224
Hpy188III	TCNNGA	1 cut(s)	322
Hpy8I	GTNNAC	3 cut(s)	432, 556, 921
Hpy99I	CGWCG	3 cut(s)	130, 356, 554
HpyAV	CCTTC	7 cut(s)	301, 535, 539, 647, 694, 872, 1282
HpyCH4III	ACNGT	5 cut(s)	255, 719, 930, 961, 1210
HpyCH4IV	ACGT	3 cut(s)	434, 495, 502
HpyCH4V	TGCA	7 cut(s)	4, 660, 1076, 1097, 1238, 1249, 1266
HpyF10VI	GCNNNNNNNGC	4 cut(s)	158, 218, 1103, 1190
HpyF3I	CTNAG	4 cut(s)	341, 374, 396, 1179
HpySE526I	ACGT	3 cut(s)	434, 495, 502
Hsp92I	GRCGYC	2 cut(s)	549, 1184
Hsp92II	CATG	9 cut(s)	106, 136, 157, 184, 676, 759, 953, 986, 1017
HspAI	GCGC	4 cut(s)	316, 456, 1184, 1300
KasI	GGCGCC	1 cut(s)	1183
KpnI	GGTACC	1 cut(s)	447
Kzo9I	GATC	5 cut(s)	116, 186, 324, 406, 511
LguI	GCTCTTC	1 cut(s)	92
LmnI	GCTCC	1 cut(s)	1054
Lsp1109I	GCAGC	2 cut(s)	1201, 1250
LweI	GCATC	1 cut(s)	647
MaeI	CTAG	2 cut(s)	440, 944
MaeII	ACGT	3 cut(s)	434, 495, 502
MaeIII	GTNAC	4 cut(s)	249, 758, 955, 1067
MalI	GATC	5 cut(s)	118, 188, 326, 408, 513
MbiI	CCGCTC	1 cut(s)	85
MboI	GATC	5 cut(s)	116, 186, 324, 406, 511
MboII	GAAGA	5 cut(s)	79, 136, 319, 734, 818
MfeI	CAATTG	2 cut(s)	792, 861
MflI	RGATCY	1 cut(s)	324
MhlI	GDGCHC	1 cut(s)	672
MlsI	TGGCCA	1 cut(s)	272
MluCI	AATT	5 cut(s)	792, 861, 893, 1009, 1092
MluNI	TGGCCA	1 cut(s)	272
Mly113I	GGCGCC	1 cut(s)	1184
MmeI	TCCRAC	1 cut(s)	438
Mox20I	TGGCCA	1 cut(s)	272
MroXI	GAANNNNTTC	2 cut(s)	317, 810
MscI	TGGCCA	1 cut(s)	272
MseI	TTAA	2 cut(s)	699, 1357
MslI	CAYNNNNRTG	1 cut(s)	1049
Msp20I	TGGCCA	1 cut(s)	272
MspA1I	CMGCKG	3 cut(s)	225, 1026, 1263
MspI	CCGG	5 cut(s)	427, 490, 924, 1080, 1307
MspR9I	CCNGG	2 cut(s)	1081, 1146
MunI	CAATTG	2 cut(s)	792, 861
MvaI	CCWGG	1 cut(s)	1146
MvnI	CGCG	1 cut(s)	456
MwoI	GCNNNNNNNGC	4 cut(s)	158, 218, 1103, 1190
NarI	GGCGCC	1 cut(s)	1184
NciI	CCSGG	1 cut(s)	1081
NcoI	CCATGG	3 cut(s)	102, 949, 982
NdeII	GATC	5 cut(s)	116, 186, 324, 406, 511
NlaIII	CATG	9 cut(s)	106, 136, 157, 184, 676, 759, 953, 986, 1017
NlaIV	GGNNCC	6 cut(s)	108, 445, 1021, 1185, 1254, 1339
NmuCI	GTSAC	2 cut(s)	249, 758
NspI	RCATGY	2 cut(s)	184, 759
PaqCI	CACCTGC	1 cut(s)	1198
PciI	ACATGT	2 cut(s)	180, 755
PciSI	GCTCTTC	1 cut(s)	92
PcsI	WCGNNNNNNNCGW	1 cut(s)	134
PdmI	GAANNNNTTC	2 cut(s)	317, 810
PfeI	GAWTC	4 cut(s)	139, 749, 797, 1132
PflMI	CCANNNNNTGG	2 cut(s)	103, 1145
PinAI	ACCGGT	2 cut(s)	426, 489
PkrI	GCNGC	4 cut(s)	175, 710, 1216, 1265
PluTI	GGCGCC	1 cut(s)	1187
PmaCI	CACGTG	1 cut(s)	503
PmlI	CACGTG	1 cut(s)	503
Ppu21I	YACGTR	2 cut(s)	496, 503
PscI	ACATGT	2 cut(s)	180, 755
PsiI	TTATAA	1 cut(s)	648
Psp6I	CCWGG	1 cut(s)	1144
PspCI	CACGTG	1 cut(s)	503
PspFI	CCCAGC	1 cut(s)	1026
PspGI	CCWGG	1 cut(s)	1144
PspN4I	GGNNCC	6 cut(s)	108, 445, 1021, 1185, 1254, 1339
PspPI	GGNCC	2 cut(s)	107, 1148
PstNI	CAGNNNCTG	1 cut(s)	1214
PsuI	RGATCY	1 cut(s)	324
PvuII	CAGCTG	3 cut(s)	225, 1026, 1263
RsaI	GTAC	7 cut(s)	113, 257, 425, 437, 445, 494, 1043
RsaNI	GTAC	7 cut(s)	112, 256, 424, 436, 444, 493, 1042
RseI	CAYNNNNRTG	1 cut(s)	1049
SapI	GCTCTTC	1 cut(s)	92
SaqAI	TTAA	2 cut(s)	699, 1357
SatI	GCNGC	4 cut(s)	174, 709, 1215, 1264
Sau3AI	GATC	5 cut(s)	116, 186, 324, 406, 511
Sau96I	GGNCC	2 cut(s)	107, 1148
ScrFI	CCNGG	2 cut(s)	1081, 1146
SduI	GDGCHC	1 cut(s)	672
SfaNI	GCATC	1 cut(s)	647
SfcI	CTRYAG	1 cut(s)	766
SfoI	GGCGCC	1 cut(s)	1185
SinI	GGWCC	2 cut(s)	107, 1148
SmiMI	CAYNNNNRTG	1 cut(s)	1049
Sse9I	AATT	5 cut(s)	792, 861, 893, 1009, 1092
SsiI	CCGC	5 cut(s)	83, 171, 174, 454, 708
SspDI	GGCGCC	1 cut(s)	1183
SspMI	CTAG	2 cut(s)	440, 944
StyD4I	CCNGG	2 cut(s)	1079, 1144
StyI	CCWWGG	6 cut(s)	102, 439, 571, 780, 949, 982
TaaI	ACNGT	5 cut(s)	255, 719, 930, 961, 1210
TaiI	ACGT	3 cut(s)	437, 498, 505
TaqI	TCGA	3 cut(s)	185, 351, 687
TaqII	GACCGA	2 cut(s)	118, 377
TasI	AATT	5 cut(s)	792, 861, 893, 1009, 1092
TauI	GCSGC	2 cut(s)	176, 711
TfiI	GAWTC	4 cut(s)	139, 749, 797, 1132
Tru1I	TTAA	2 cut(s)	699, 1357
Tru9I	TTAA	2 cut(s)	699, 1357
TscAI	CASTG	5 cut(s)	258, 584, 724, 1078, 1325
TseFI	GTSAC	2 cut(s)	249, 758
TseI	GCWGC	2 cut(s)	1214, 1263
Tsp45I	GTSAC	2 cut(s)	249, 758
TspDTI	ATGAA	7 cut(s)	28, 337, 666, 682, 819, 897, 1002
TspGWI	ACGGA	1 cut(s)	99
TspRI	CASTG	5 cut(s)	258, 584, 724, 1078, 1325
Van91I	CCANNNNNTGG	2 cut(s)	103, 1145
VpaK11BI	GGWCC	2 cut(s)	107, 1148
XagI	CCTNNNNNAGG	1 cut(s)	738
XapI	RAATTY	2 cut(s)	893, 1009
XceI	RCATGY	2 cut(s)	184, 759
XcmI	CCANNNNNNNNNTGG	1 cut(s)	584
XmaJI	CCTAGG	1 cut(s)	439
XmnI	GAANNNNTTC	2 cut(s)	317, 810
XspI	CTAG	2 cut(s)	440, 944

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.