Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0012766

Physical Location & Seq

Genomic Coordinates Reverse (-)

3185645 .. 3188130

Gene Structure 2486 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000010637

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1407 bp

ATGGGTCCGTACCGATCATCATCGCCGATCATGGCGATCCTCTTCCTCGCCATGTTCGCCTTGTCCTCCGCCGCCGACATGTCGATCATCGCCTACGACAACAGCCACGCCTCCTCTGCCGGCTGGAGGACCGACGAGGAGGTGATGTCACTGTACGAGGGGTGGTTGGCCAAGCACGGCAGGTCCTACAACGGCTTGGGAGAGAAGGAGAAGCGCTTCCAGATCTTCAAGGACAACCTCAGGTTCATCGACGACCATAACGCTCTCAACCTCAGCTACAAGCTCGGTCTGACTAAGTTCGCCGATCTGTCCAACGAGGAGTACCGGTCAACGTACCTAGGGACCAAGCCCCGCGCTCTAAATCGGCTCTCCAGGACAAAGAGCGACCGGTACGCGCCACGTGTCGGCGATCAGTTGCCTGACGCTGTTGATTGGAGGAAGGAAGGCGTCGTCAACCCTGTCAAAGACCAAGGCCAGTGTGGGAGTTGCTGGGCATTCTCAACAATCTCTGCTGTGGAAGGAATCAATAAGATAGTGACTGGCGATCTTATCTCACTATCCGAGCAGGAGTTGGTTGATTGTGATAAAACTTATAATGAAGGATGCAATGGAGGGCTCATGGACTATGCCTTCGAGTTCATCATTAACAATGGTGGCATTGACAGTGAAGATGACTATCCTTACAAAGGATATGATTCCACATGTGACACCTACAGGAAAAATGCCAAGGTGGTTTCAATTGATTCTTATGAAGATGTTCCCACATACGATGAGCAAGCATTGCAAAAGGCTGTTGCCAATCAGCCAATTGCTGTTGCTATTGAAGGAGGAGGCAGGGAATTCCAGTTATATTCATCAGGTGTGTTTACTGGACGGTGTGGGACAGCACTAGACCATGGCGTTACTGTTGTTGGATACGGCACAGACCATGGCGTTGATTACTGGATTGTGAGGAATTCATGGGGTTCCAGCTGGGGAGAGGCAGGGTACATCAGAATGGAGCGTAATCTGGGTAACACCGCAACCGGGAAATGTGGAATTGCAATGGAGGCTTCTTACCCAGTCAAGGTAGGACAGAATCCCCCAAACCCTGGTCCATCTCCTCCATCTCCGATAAAACCTCCTCAGGTTTGTGACAACTACTTCTCGTGCCCTGAGAGCAACACCTGCTGCTGTATCTATCAGTATGCAAACTACTGCTTTGCTTGGGGATGCTGTCCTCTTGAAGGCGCCACCTGCTGTGATGACCATTACAGTTGCTGCCCATCAGACTACCCCGTCTGCAATGTCAATGCAGGAACCTGTCAGCTGAGCAAGGGCAATCCAATGAGTGTGAAGTCATTGAAGCGCACACCGGCTAAAGCTCACTGGACTTTGGGAGGTGGTGCCAAGCACAGCAGTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0000932 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005911 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0010494 GO:0016787 GO:0019538 GO:0030054 GO:0030163 GO:0032991 GO:0035770 GO:0036464 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0050832 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0055044 GO:0070011 GO:0071704 GO:0098542 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Granulin Inhibitor_I29 Peptidase_C1

Protein Analysis

469

Amino Acids

51.24

Weight (kDa)

5.31

Isoelectric Point (pI)

36.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I29	PF08246	52 - 108	2.2e-19	Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1	PF00112	139 - 355	1.9e-85	Papain family cysteine protease
Granulin	PF00396	389 - 436	1.3e-07	Granulin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012766)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47128 AT5G43060
fragaria_vesca	FvH4_2g33910
malus_domestica	MD08G1065500.v1.1 MD08G1093900.v1.1 MD15G1078300.v1.1
prunus_persica	Prupe.1G431000_v2.0.a1
pyrus_communis	pycom08g07660 pycom15g07310
rosa_chinensis	RchiOBHm_Chr6g0308501
rosa_laevigata	RLG00000010637
rosa_multiflora	Rmu_sc0020439.1_g000004
rosa_roxburghii	Rroxscaffold_7G00160070
rosa_rugosa	Rorug06G0367300
rosa_samantha	Rh6AG477200 Rh6BG487400 Rh6DG478500
rosa_wichuraiana	Rw6G041640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	594
AarI	CACCTGC	2 cut(s)	1175, 1244
AasI	GACNNNNNNGTC	1 cut(s)	1277
Acc36I	ACCTGC	3 cut(s)	171, 1175, 1244
AccB1I	GGYRCC	2 cut(s)	1229, 1385
AccB7I	CCANNNNNTGG	1 cut(s)	1091
AccII	CGCG	2 cut(s)	354, 395
AciI	CCGC	4 cut(s)	69, 72, 352, 1020
AclWI	GGATC	1 cut(s)	31
AcoI	YGGCCR	1 cut(s)	168
AcsI	RAATTY	2 cut(s)	839, 955
AcvI	CACGTG	1 cut(s)	401
AcyI	GRCGYC	2 cut(s)	447, 1230
AfaI	GTAC	6 cut(s)	11, 155, 323, 335, 392, 989
AfeI	AGCGCT	1 cut(s)	215
AfiI	CCNNNNNNNGG	7 cut(s)	126, 404, 686, 1026, 1066, 1091, 1226
AflIII	ACRYGT	3 cut(s)	78, 400, 701
AgeI	ACCGGT	2 cut(s)	324, 387
AgsI	TTSAA	5 cut(s)	229, 738, 824, 1226, 1345
AjnI	CCWGG	2 cut(s)	371, 1090
AluBI	AGCT	5 cut(s)	276, 283, 972, 1309, 1364
AluI	AGCT	5 cut(s)	276, 283, 972, 1309, 1364
AlwI	GGATC	1 cut(s)	31
AlwNI	CAGNNNCTG	1 cut(s)	1260
Aor51HI	AGCGCT	1 cut(s)	215
AoxI	GGCC	2 cut(s)	168, 472
ApeKI	GCWGC	2 cut(s)	1170, 1260
ApoI	RAATTY	2 cut(s)	839, 955
ArsI	GACNNNNNNTTYG	2 cut(s)	614, 646
AsiGI	ACCGGT	2 cut(s)	324, 387
Asp700I	GAANNNNTTC	2 cut(s)	215, 756
AspA2I	CCTAGG	1 cut(s)	337
AspLEI	GCGC	5 cut(s)	216, 356, 397, 1232, 1350
AspS9I	GGNCC	5 cut(s)	5, 129, 183, 342, 1094
AsuC2I	CCSGG	1 cut(s)	1027
AsuHPI	GGTGA	1 cut(s)	154
AvaII	GGWCC	5 cut(s)	5, 129, 183, 342, 1094
AvrII	CCTAGG	1 cut(s)	337
AxyI	CCTNAGG	2 cut(s)	239, 1125
BaeGI	GKGCMC	1 cut(s)	1154
BalI	TGGCCA	1 cut(s)	170
BanI	GGYRCC	2 cut(s)	1229, 1385
BanII	GRGCYC	1 cut(s)	618
BauI	CACGAG	1 cut(s)	1147
BbrPI	CACGTG	1 cut(s)	401
BbvCI	CCTCAGC	1 cut(s)	272
BbvI	GCAGC	2 cut(s)	1157, 1247
BccI	CCATC	3 cut(s)	1105, 1114, 1273
BceAI	ACGGC	3 cut(s)	193, 208, 934
BciT130I	CCWGG	2 cut(s)	373, 1092
BciVI	GTATCC	1 cut(s)	908
BcnI	CCSGG	1 cut(s)	1027
BfaI	CTAG	2 cut(s)	338, 890
BfmI	CTRYAG	1 cut(s)	712
BfoI	RGCGCY	2 cut(s)	217, 1233
BfuAI	ACCTGC	3 cut(s)	171, 1175, 1244
BfuI	GTATCC	1 cut(s)	908
BglII	AGATCT	1 cut(s)	222
BisI	GCNGC	3 cut(s)	72, 1171, 1261
BlnI	CCTAGG	1 cut(s)	337
BlpI	GCTNAGC	1 cut(s)	1310
BlsI	GCNGC	3 cut(s)	73, 1172, 1262
Bme1390I	CCNGG	3 cut(s)	373, 1027, 1092
Bme18I	GGWCC	5 cut(s)	5, 129, 183, 342, 1094
BmgT120I	GGNCC	5 cut(s)	5, 129, 183, 342, 1094
BmiI	GGNNCC	6 cut(s)	6, 343, 967, 1231, 1300, 1387
BmrFI	CCNGG	3 cut(s)	373, 1027, 1092
BmrI	ACTGGG	1 cut(s)	1055
BmsI	GCATC	2 cut(s)	593, 1202
BmuI	ACTGGG	1 cut(s)	1055
BpmI	CTGGAG	2 cut(s)	145, 355
Bpu10I	CCTNAGC	1 cut(s)	272
Bpu1102I	GCTNAGC	1 cut(s)	1310
BpuMI	CCSGG	1 cut(s)	1027
BsaAI	YACGTR	1 cut(s)	401
BsaBI	GATNNNNATC	2 cut(s)	19, 675
BsaHI	GRCGYC	2 cut(s)	447, 1230
BsaJI	CCNNGG	6 cut(s)	337, 469, 726, 895, 928, 1090
BsaWI	WCCGGW	2 cut(s)	324, 387
BsaXI	ACNNNNNCTCC	4 cut(s)	131, 161, 311, 341
Bsc4I	CCNNNNNNNGG	7 cut(s)	126, 404, 686, 1026, 1066, 1091, 1226
Bse118I	RCCGGY	4 cut(s)	119, 324, 387, 1354
Bse1I	ACTGG	7 cut(s)	475, 544, 844, 874, 947, 1061, 1373
Bse21I	CCTNAGG	2 cut(s)	239, 1125
Bse3DI	GCAATG	4 cut(s)	613, 779, 1050, 1291
Bse8I	GATNNNNATC	2 cut(s)	19, 675
BseBI	CCWGG	2 cut(s)	373, 1092
BseDI	CCNNGG	6 cut(s)	337, 469, 726, 895, 928, 1090
BseGI	GGATG	2 cut(s)	608, 1217
BseJI	GATNNNNATC	2 cut(s)	19, 675
BseLI	CCNNNNNNNGG	7 cut(s)	126, 404, 686, 1026, 1066, 1091, 1226
BseMI	GCAATG	4 cut(s)	613, 779, 1050, 1291
BseMII	CTCAG	5 cut(s)	253, 286, 1139, 1146, 1301
BseNI	ACTGG	7 cut(s)	475, 544, 844, 874, 947, 1061, 1373
BseRI	GAGGAG	6 cut(s)	103, 152, 332, 843, 1092, 1113
BseSI	GKGCMC	1 cut(s)	1154
BseXI	GCAGC	2 cut(s)	1157, 1247
BseYI	CCCAGC	2 cut(s)	489, 972
Bsh1236I	CGCG	2 cut(s)	354, 395
Bsh1285I	CGRYCG	1 cut(s)	388
BshFI	GGCC	2 cut(s)	170, 474
BshNI	GGYRCC	2 cut(s)	1229, 1385
BshTI	ACCGGT	2 cut(s)	324, 387
BsiEI	CGRYCG	1 cut(s)	388
BsiSI	CCGG	5 cut(s)	120, 325, 388, 1026, 1355
BslFI	GGGAC	2 cut(s)	355, 895
BslI	CCNNNNNNNGG	7 cut(s)	126, 404, 686, 1026, 1066, 1091, 1226
BsmFI	GGGAC	2 cut(s)	355, 895
BsmI	GAATGC	1 cut(s)	494
BsnI	GGCC	2 cut(s)	170, 474
Bsp1286I	GDGCHC	2 cut(s)	618, 1154
Bsp143I	GATC	8 cut(s)	14, 27, 36, 84, 222, 304, 409, 544
Bsp1720I	GCTNAGC	1 cut(s)	1310
Bsp19I	CCATGG	2 cut(s)	895, 928
BspACI	CCGC	4 cut(s)	69, 72, 352, 1020
BspANI	GGCC	2 cut(s)	170, 474
BspCNI	CTCAG	5 cut(s)	252, 285, 1138, 1147, 1302
BspFNI	CGCG	2 cut(s)	354, 395
BspLI	GGNNCC	6 cut(s)	6, 343, 967, 1231, 1300, 1387
BspMI	ACCTGC	3 cut(s)	171, 1175, 1244
BspPI	GGATC	1 cut(s)	31
BspT107I	GGYRCC	2 cut(s)	1229, 1385
BsrDI	GCAATG	4 cut(s)	613, 779, 1050, 1291
BsrFI	RCCGGY	4 cut(s)	119, 324, 387, 1354
BsrI	ACTGG	7 cut(s)	475, 544, 844, 874, 947, 1061, 1373
BssAI	RCCGGY	4 cut(s)	119, 324, 387, 1354
BssECI	CCNNGG	6 cut(s)	337, 469, 726, 895, 928, 1090
BssMI	GATC	8 cut(s)	14, 27, 36, 84, 222, 304, 409, 544
BssNI	GRCGYC	2 cut(s)	447, 1230
BssSI	CACGAG	1 cut(s)	1147
BssT1I	CCWWGG	5 cut(s)	337, 469, 726, 895, 928
Bst2BI	CACGAG	1 cut(s)	1147
Bst2UI	CCWGG	2 cut(s)	373, 1092
Bst4CI	ACNGT	5 cut(s)	153, 665, 876, 907, 1256
Bst6I	CTCTTC	1 cut(s)	47
BstACI	GRCGYC	2 cut(s)	447, 1230
BstAPI	GCANNNNNTGC	2 cut(s)	781, 1167
BstBAI	YACGTR	1 cut(s)	401
BstC8I	GCNNGC	2 cut(s)	121, 777
BstDEI	CTNAG	6 cut(s)	239, 272, 294, 1125, 1155, 1310
BstDSI	CCRYGG	2 cut(s)	895, 928
BstENI	CCTNNNNNAGG	2 cut(s)	684, 1224
BstF5I	GGATG	2 cut(s)	608, 1217
BstFNI	CGCG	2 cut(s)	354, 395
BstH2I	RGCGCY	2 cut(s)	217, 1233
BstHHI	GCGC	5 cut(s)	216, 356, 397, 1232, 1350
BstKTI	GATC	8 cut(s)	17, 30, 39, 87, 225, 307, 412, 547
BstMBI	GATC	8 cut(s)	14, 27, 36, 84, 222, 304, 409, 544
BstMCI	CGRYCG	1 cut(s)	388
BstMWI	GCNNNNNNNGC	7 cut(s)	56, 116, 781, 1049, 1158, 1167, 1236
BstNI	CCWGG	2 cut(s)	373, 1092
BstNSI	RCATGY	2 cut(s)	82, 705
BstSCI	CCNGG	3 cut(s)	371, 1025, 1090
BstSFI	CTRYAG	1 cut(s)	712
BstSLI	GKGCMC	1 cut(s)	1154
BstUI	CGCG	2 cut(s)	354, 395
BstV1I	GCAGC	2 cut(s)	1157, 1247
BstX2I	RGATCY	1 cut(s)	222
BstYI	RGATCY	1 cut(s)	222
Bsu36I	CCTNAGG	2 cut(s)	239, 1125
BsuI	GTATCC	1 cut(s)	908
BsuRI	GGCC	2 cut(s)	170, 474
BtgI	CCRYGG	2 cut(s)	895, 928
BtgZI	GCGATG	2 cut(s)	6, 73
BtsCI	GGATG	2 cut(s)	608, 1217
BtsIMutI	CAGTG	4 cut(s)	149, 482, 670, 1366
BveI	ACCTGC	3 cut(s)	171, 1175, 1244
Cac8I	GCNNGC	2 cut(s)	121, 777
CaiI	CAGNNNCTG	1 cut(s)	1260
CfoI	GCGC	5 cut(s)	216, 356, 397, 1232, 1350
Cfr10I	RCCGGY	4 cut(s)	119, 324, 387, 1354
Cfr13I	GGNCC	5 cut(s)	5, 129, 183, 342, 1094
CseI	GACGC	2 cut(s)	431, 436
Csp6I	GTAC	6 cut(s)	10, 154, 322, 334, 391, 988
CspAI	ACCGGT	2 cut(s)	324, 387
CviAII	CATG	8 cut(s)	31, 52, 79, 619, 702, 896, 929, 960
CviQI	GTAC	6 cut(s)	10, 154, 322, 334, 391, 988
DdeI	CTNAG	6 cut(s)	239, 272, 294, 1125, 1155, 1310
DinI	GGCGCC	1 cut(s)	1231
DpnI	GATC	8 cut(s)	16, 29, 38, 86, 224, 306, 411, 546
DpnII	GATC	8 cut(s)	14, 27, 36, 84, 222, 304, 409, 544
DrdI	GACNNNNNNGTC	1 cut(s)	1277
DseDI	GACNNNNNNGTC	1 cut(s)	1277
EaeI	YGGCCR	1 cut(s)	168
Eam1104I	CTCTTC	1 cut(s)	47
EarI	CTCTTC	1 cut(s)	47
EciI	GGCGGA	1 cut(s)	58
Eco130I	CCWWGG	5 cut(s)	337, 469, 726, 895, 928
Eco24I	GRGCYC	1 cut(s)	618
Eco47I	GGWCC	5 cut(s)	5, 129, 183, 342, 1094
Eco47III	AGCGCT	1 cut(s)	215
Eco72I	CACGTG	1 cut(s)	401
Eco81I	CCTNAGG	2 cut(s)	239, 1125
EcoNI	CCTNNNNNAGG	2 cut(s)	684, 1224
EcoO109I	RGGNCCY	1 cut(s)	183
EcoRI	GAATTC	2 cut(s)	839, 955
EcoRII	CCWGG	2 cut(s)	371, 1090
EcoT14I	CCWWGG	5 cut(s)	337, 469, 726, 895, 928
EcoT38I	GRGCYC	1 cut(s)	618
EgeI	GGCGCC	1 cut(s)	1231
EheI	GGCGCC	1 cut(s)	1231
ErhI	CCWWGG	5 cut(s)	337, 469, 726, 895, 928
FaeI	CATG	8 cut(s)	34, 55, 82, 622, 705, 899, 932, 963
FaqI	GGGAC	2 cut(s)	355, 895
FatI	CATG	8 cut(s)	30, 51, 78, 618, 701, 895, 928, 959
FauI	CCCGC	1 cut(s)	359
Fnu4HI	GCNGC	3 cut(s)	72, 1171, 1261
FokI	GGATG	2 cut(s)	615, 1224
FriOI	GRGCYC	1 cut(s)	618
Fsp4HI	GCNGC	3 cut(s)	72, 1171, 1261
FspBI	CTAG	2 cut(s)	338, 890
GlaI	GCGC	5 cut(s)	215, 355, 396, 1231, 1349
GluI	GCNGC	3 cut(s)	72, 1171, 1261
GsaI	CCCAGC	2 cut(s)	493, 976
GsuI	CTGGAG	2 cut(s)	145, 355
HaeII	RGCGCY	2 cut(s)	217, 1233
HaeIII	GGCC	2 cut(s)	170, 474
HapII	CCGG	5 cut(s)	120, 325, 388, 1026, 1355
HgaI	GACGC	2 cut(s)	431, 436
HhaI	GCGC	5 cut(s)	216, 356, 397, 1232, 1350
Hin1I	GRCGYC	2 cut(s)	447, 1230
Hin1II	CATG	8 cut(s)	34, 55, 82, 622, 705, 899, 932, 963
Hin6I	GCGC	5 cut(s)	214, 354, 395, 1230, 1348
HinP1I	GCGC	5 cut(s)	214, 354, 395, 1230, 1348
HincII	GTYRAC	2 cut(s)	330, 454
HindII	GTYRAC	2 cut(s)	330, 454
HinfI	GANTC	4 cut(s)	522, 695, 743, 1078
HpaII	CCGG	5 cut(s)	120, 325, 388, 1026, 1355
HphI	GGTGA	1 cut(s)	154
Hpy166II	GTNNAC	3 cut(s)	330, 454, 867
Hpy188I	TCNGA	5 cut(s)	291, 562, 995, 1113, 1270
Hpy188III	TCNNGA	2 cut(s)	220, 1223
Hpy8I	GTNNAC	3 cut(s)	330, 454, 867
Hpy99I	CGWCG	3 cut(s)	137, 254, 452
HpyAV	CCTTC	8 cut(s)	199, 433, 437, 512, 593, 640, 818, 1220
HpyCH4III	ACNGT	5 cut(s)	153, 665, 876, 907, 1256
HpyCH4IV	ACGT	2 cut(s)	332, 400
HpyCH4V	TGCA	6 cut(s)	606, 784, 1043, 1190, 1284, 1295
HpyF10VI	GCNNNNNNNGC	7 cut(s)	56, 116, 781, 1049, 1158, 1167, 1236
HpyF3I	CTNAG	6 cut(s)	239, 272, 294, 1125, 1155, 1310
HpySE526I	ACGT	2 cut(s)	332, 400
Hsp92I	GRCGYC	2 cut(s)	447, 1230
Hsp92II	CATG	8 cut(s)	34, 55, 82, 622, 705, 899, 932, 963
HspAI	GCGC	5 cut(s)	214, 354, 395, 1230, 1348
KasI	GGCGCC	1 cut(s)	1229
KroI	GCCGGC	1 cut(s)	119
KroNI	GCCGGC	1 cut(s)	121
Kzo9I	GATC	8 cut(s)	14, 27, 36, 84, 222, 304, 409, 544
LmnI	GCTCC	1 cut(s)	1000
Lsp1109I	GCAGC	2 cut(s)	1157, 1247
LweI	GCATC	2 cut(s)	593, 1202
MaeI	CTAG	2 cut(s)	338, 890
MaeII	ACGT	2 cut(s)	332, 400
MaeIII	GTNAC	6 cut(s)	147, 535, 704, 901, 1013, 1133
MalI	GATC	8 cut(s)	16, 29, 38, 86, 224, 306, 411, 546
MboI	GATC	8 cut(s)	14, 27, 36, 84, 222, 304, 409, 544
MboII	GAAGA	4 cut(s)	34, 217, 680, 764
MfeI	CAATTG	2 cut(s)	738, 807
MflI	RGATCY	1 cut(s)	222
MhlI	GDGCHC	2 cut(s)	618, 1154
MlsI	TGGCCA	1 cut(s)	170
MluCI	AATT	5 cut(s)	738, 807, 839, 955, 1038
MluNI	TGGCCA	1 cut(s)	170
Mly113I	GGCGCC	1 cut(s)	1230
MmeI	TCCRAC	2 cut(s)	336, 892
Mox20I	TGGCCA	1 cut(s)	170
MroNI	GCCGGC	1 cut(s)	119
MroXI	GAANNNNTTC	2 cut(s)	215, 756
MscI	TGGCCA	1 cut(s)	170
MseI	TTAA	2 cut(s)	645, 1405
MslI	CAYNNNNRTG	1 cut(s)	995
Msp20I	TGGCCA	1 cut(s)	170
MspA1I	CMGCKG	2 cut(s)	972, 1309
MspI	CCGG	5 cut(s)	120, 325, 388, 1026, 1355
MspR9I	CCNGG	3 cut(s)	373, 1027, 1092
MunI	CAATTG	2 cut(s)	738, 807
Mva1269I	GAATGC	1 cut(s)	494
MvaI	CCWGG	2 cut(s)	373, 1092
MvnI	CGCG	2 cut(s)	354, 395
MwoI	GCNNNNNNNGC	7 cut(s)	56, 116, 781, 1049, 1158, 1167, 1236
NaeI	GCCGGC	1 cut(s)	121
NarI	GGCGCC	1 cut(s)	1230
NciI	CCSGG	1 cut(s)	1027
NcoI	CCATGG	2 cut(s)	895, 928
NdeII	GATC	8 cut(s)	14, 27, 36, 84, 222, 304, 409, 544
NgoMIV	GCCGGC	1 cut(s)	119
NlaIII	CATG	8 cut(s)	34, 55, 82, 622, 705, 899, 932, 963
NlaIV	GGNNCC	6 cut(s)	6, 343, 967, 1231, 1300, 1387
NmuCI	GTSAC	4 cut(s)	147, 535, 704, 1133
NspI	RCATGY	2 cut(s)	82, 705
PaqCI	CACCTGC	2 cut(s)	1175, 1244
PciI	ACATGT	2 cut(s)	78, 701
PctI	GAATGC	1 cut(s)	494
PdiI	GCCGGC	1 cut(s)	121
PdmI	GAANNNNTTC	2 cut(s)	215, 756
PfeI	GAWTC	4 cut(s)	522, 695, 743, 1078
PflMI	CCANNNNNTGG	1 cut(s)	1091
PfoI	TCCNGGA	1 cut(s)	371
PinAI	ACCGGT	2 cut(s)	324, 387
PkrI	GCNGC	3 cut(s)	73, 1172, 1262
PluTI	GGCGCC	1 cut(s)	1233
PmaCI	CACGTG	1 cut(s)	401
PmlI	CACGTG	1 cut(s)	401
Ppu21I	YACGTR	1 cut(s)	401
PpuMI	RGGWCCY	1 cut(s)	183
PscI	ACATGT	2 cut(s)	78, 701
PsiI	TTATAA	1 cut(s)	594
Psp5II	RGGWCCY	1 cut(s)	183
Psp6I	CCWGG	2 cut(s)	371, 1090
PspCI	CACGTG	1 cut(s)	401
PspFI	CCCAGC	2 cut(s)	489, 972
PspGI	CCWGG	2 cut(s)	371, 1090
PspN4I	GGNNCC	6 cut(s)	6, 343, 967, 1231, 1300, 1387
PspPI	GGNCC	5 cut(s)	5, 129, 183, 342, 1094
PspPPI	RGGWCCY	1 cut(s)	183
PstNI	CAGNNNCTG	1 cut(s)	1260
PsuI	RGATCY	1 cut(s)	222
PvuII	CAGCTG	2 cut(s)	972, 1309
RsaI	GTAC	6 cut(s)	11, 155, 323, 335, 392, 989
RsaNI	GTAC	6 cut(s)	10, 154, 322, 334, 391, 988
RseI	CAYNNNNRTG	1 cut(s)	995
SaqAI	TTAA	2 cut(s)	645, 1405
SatI	GCNGC	3 cut(s)	72, 1171, 1261
Sau3AI	GATC	8 cut(s)	14, 27, 36, 84, 222, 304, 409, 544
Sau96I	GGNCC	5 cut(s)	5, 129, 183, 342, 1094
ScrFI	CCNGG	3 cut(s)	373, 1027, 1092
SduI	GDGCHC	2 cut(s)	618, 1154
SfaNI	GCATC	2 cut(s)	593, 1202
SfcI	CTRYAG	1 cut(s)	712
SfoI	GGCGCC	1 cut(s)	1231
SinI	GGWCC	5 cut(s)	5, 129, 183, 342, 1094
SmiMI	CAYNNNNRTG	1 cut(s)	995
Sse9I	AATT	5 cut(s)	738, 807, 839, 955, 1038
SsiI	CCGC	4 cut(s)	69, 72, 352, 1020
SspDI	GGCGCC	1 cut(s)	1229
SspMI	CTAG	2 cut(s)	338, 890
StyD4I	CCNGG	3 cut(s)	371, 1025, 1090
StyI	CCWWGG	5 cut(s)	337, 469, 726, 895, 928
TaaI	ACNGT	5 cut(s)	153, 665, 876, 907, 1256
TaiI	ACGT	2 cut(s)	335, 403
TaqI	TCGA	3 cut(s)	83, 249, 633
TaqII	GACCGA	2 cut(s)	146, 275
TasI	AATT	5 cut(s)	738, 807, 839, 955, 1038
TauI	GCSGC	1 cut(s)	74
TfiI	GAWTC	4 cut(s)	522, 695, 743, 1078
Tru1I	TTAA	2 cut(s)	645, 1405
Tru9I	TTAA	2 cut(s)	645, 1405
TscAI	CASTG	4 cut(s)	156, 482, 670, 1373
TseFI	GTSAC	4 cut(s)	147, 535, 704, 1133
TseI	GCWGC	2 cut(s)	1170, 1260
Tsp45I	GTSAC	4 cut(s)	147, 535, 704, 1133
TspDTI	ATGAA	6 cut(s)	235, 612, 628, 765, 843, 948
TspRI	CASTG	4 cut(s)	156, 482, 670, 1373
Van91I	CCANNNNNTGG	1 cut(s)	1091
VpaK11BI	GGWCC	5 cut(s)	5, 129, 183, 342, 1094
XagI	CCTNNNNNAGG	2 cut(s)	684, 1224
XapI	RAATTY	2 cut(s)	839, 955
XceI	RCATGY	2 cut(s)	82, 705
XcmI	CCANNNNNNNNNTGG	1 cut(s)	476
XmaJI	CCTAGG	1 cut(s)	337
XmnI	GAANNNNTTC	2 cut(s)	215, 756
XspI	CTAG	2 cut(s)	338, 890

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.