Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0012766

Physical Location & Seq

Genomic Coordinates Forward (+)

65284133 .. 65287267

Gene Structure 3135 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G041640.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1410 bp

ATGGGTCCGTACCGATCATCATCATCGCCGATCATGGCGATCCTCTTCCTCGCCATGTTCGCCTTGTCCTCCGCCGCCGACATGTCGATCATCGCCTACGACAACAGCCACGCCTCCTCTGCCAGCTGGAGGACCGACGAGGAGGTGATGTCACTGTACGAGGGGTGGTTGGCCAAGCACGGCAAGTCCTACAACGGCTTGGGAGAGAAGGACAAGCGCTTCCAGATCTTCAAGGACAACCTCAGGTTCATCGACGACCACAACGCTCTCAACCTCAGCTACAAGCTCGGTCTGACCAAGTTCGCCGATCTGTCCAACGAGGAGTACCGGTCAACGTACCTAGGGACCAAGCCCCGCGCTCTGAATAGGCTCTCCAAGACAAAGAGCGACCGGTACGCGCCACGTGTCGGCGATCAGTTGCCTGACGCTGTTGATTGGAGGAAGGAAGGCGTCGTCAACCCTGTCAAAGACCAAGGCCAGTGTGGGAGTTGCTGGGCATTTTCAACAATCTCTGCTGTGGAAGGAATCAATAAGATAGTGACTGGCGATCTTATCTCACTATCTGAGCAGGAGTTGGTTGATTGTGATAAAACTTATAATGAAGGATGTAATGGAGGGCTCATGGACTATGCCTTCGAGTTCATCATTAACAATGGTGGCATTGACAGTGAAGATGACTATCCTTACAAAGGATATGATTCCACATGTGACACCTACAGGAAAAATGCCAGGGTGGTTTCAATTGATTCTTATGAAGATGTTCCCACATACGATGAGCAAGCCTTGCAAAAGGCTGTTGCCAATCAGCCAATTGCTGTTGCTATTGAAGGAGGAGGCAGGGAATTCCAGTTATATTCATCAGGTGTGTTTACTGGACGGTGTGGGACAGCACTAGACCATGGTGTTACTGTTGTTGGATACGGCACAGACCATGGCGTTGATTACTGGATTGTGAGGAATTCATGGGGTGCCAGCTGGGGAGAGGCAGGGTACATCAGAATGGAGCGTAATCTGGGTAACACCGCAACCGGGAAATGTGGAATTGCAATGGAGGCTTCTTACCCCGTCAAGGTAGGACAGAATCCCCCTAACCCTGGTCCATCTCCTCCATCTCCGATAAAACCTCCTCAGGTTTGTGACAACTACTTCTCCTGCCCCGAGAGCAACACCTGCTGCTGTATCTATCAGTATGCAAACTACTGCTTTGCTTGGGGATGCTGTCCTCTTGAAGGTGCCACCTGCTGTGATGACCATTACAGTTGCTGCCCATCAGACTACCCCGTCTGCAATGTCAATGCAGGAACCTGTCAGCTGAGCAAGGGCAATCCAATGAGTGTGAAGTCATTGAAGCGCACACCGGCTAAAGCTCACTGGACTTTGGGAGGTGGTGCCAAGCACAGCAGTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0000932 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005911 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0010494 GO:0016787 GO:0019538 GO:0030054 GO:0030163 GO:0032991 GO:0035770 GO:0036464 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0050832 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0055044 GO:0070011 GO:0071704 GO:0098542 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Granulin Inhibitor_I29 Peptidase_C1

Protein Analysis

469

Amino Acids

51.3

Weight (kDa)

5.3

Isoelectric Point (pI)

34.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I29	PF08246	53 - 109	1.2e-19	Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1	PF00112	140 - 356	2.6e-85	Papain family cysteine protease
Granulin	PF00396	390 - 437	1.3e-07	Granulin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012766)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47128 AT5G43060
fragaria_vesca	FvH4_2g33910
malus_domestica	MD08G1065500.v1.1 MD08G1093900.v1.1 MD15G1078300.v1.1
prunus_persica	Prupe.1G431000_v2.0.a1
pyrus_communis	pycom08g07660 pycom15g07310
rosa_chinensis	RchiOBHm_Chr6g0308501
rosa_laevigata	RLG00000010637
rosa_multiflora	Rmu_sc0020439.1_g000004
rosa_roxburghii	Rroxscaffold_7G00160070
rosa_rugosa	Rorug06G0367300
rosa_samantha	Rh6AG477200 Rh6BG487400 Rh6DG478500
rosa_wichuraiana	Rw6G041640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	597
AarI	CACCTGC	2 cut(s)	1178, 1247
AasI	GACNNNNNNGTC	1 cut(s)	1280
Acc36I	ACCTGC	2 cut(s)	1178, 1247
AccB1I	GGYRCC	3 cut(s)	968, 1232, 1388
AccII	CGCG	2 cut(s)	357, 398
AciI	CCGC	4 cut(s)	72, 75, 355, 1023
AclWI	GGATC	1 cut(s)	34
AcoI	YGGCCR	1 cut(s)	171
AcsI	RAATTY	2 cut(s)	842, 958
AcvI	CACGTG	1 cut(s)	404
AcyI	GRCGYC	1 cut(s)	450
AfaI	GTAC	6 cut(s)	11, 158, 326, 338, 395, 992
AfeI	AGCGCT	1 cut(s)	218
AfiI	CCNNNNNNNGG	7 cut(s)	129, 407, 689, 1029, 1069, 1094, 1229
AflIII	ACRYGT	3 cut(s)	81, 403, 704
AgeI	ACCGGT	2 cut(s)	327, 390
AgsI	TTSAA	6 cut(s)	232, 504, 741, 827, 1229, 1348
AjnI	CCWGG	2 cut(s)	728, 1093
AluBI	AGCT	6 cut(s)	126, 279, 286, 975, 1312, 1367
AluI	AGCT	6 cut(s)	126, 279, 286, 975, 1312, 1367
AlwI	GGATC	1 cut(s)	34
AlwNI	CAGNNNCTG	1 cut(s)	1263
Ama87I	CYCGRG	1 cut(s)	1157
Aor51HI	AGCGCT	1 cut(s)	218
AoxI	GGCC	2 cut(s)	171, 475
ApeKI	GCWGC	2 cut(s)	1173, 1263
ApoI	RAATTY	2 cut(s)	842, 958
ArsI	GACNNNNNNTTYG	2 cut(s)	617, 649
AsiGI	ACCGGT	2 cut(s)	327, 390
Asp700I	GAANNNNTTC	1 cut(s)	759
AspA2I	CCTAGG	1 cut(s)	340
AspLEI	GCGC	4 cut(s)	219, 359, 400, 1353
AspS9I	GGNCC	4 cut(s)	5, 132, 345, 1097
AsuC2I	CCSGG	1 cut(s)	1030
AsuHPI	GGTGA	1 cut(s)	157
AvaI	CYCGRG	1 cut(s)	1157
AvaII	GGWCC	4 cut(s)	5, 132, 345, 1097
AvrII	CCTAGG	1 cut(s)	340
AxyI	CCTNAGG	2 cut(s)	242, 1128
BalI	TGGCCA	1 cut(s)	173
BanI	GGYRCC	3 cut(s)	968, 1232, 1388
BanII	GRGCYC	1 cut(s)	621
BbrPI	CACGTG	1 cut(s)	404
BbvCI	CCTCAGC	1 cut(s)	275
BbvI	GCAGC	2 cut(s)	1160, 1250
BccI	CCATC	3 cut(s)	1108, 1117, 1276
BceAI	ACGGC	3 cut(s)	196, 211, 937
BciT130I	CCWGG	2 cut(s)	730, 1095
BciVI	GTATCC	1 cut(s)	911
BcnI	CCSGG	1 cut(s)	1030
BfaI	CTAG	2 cut(s)	341, 893
BfmI	CTRYAG	1 cut(s)	715
BfoI	RGCGCY	1 cut(s)	220
BfuAI	ACCTGC	2 cut(s)	1178, 1247
BfuI	GTATCC	1 cut(s)	911
BglII	AGATCT	1 cut(s)	225
BisI	GCNGC	3 cut(s)	75, 1174, 1264
BlnI	CCTAGG	1 cut(s)	340
BlpI	GCTNAGC	1 cut(s)	1313
BlsI	GCNGC	3 cut(s)	76, 1175, 1265
Bme1390I	CCNGG	3 cut(s)	730, 1030, 1095
Bme18I	GGWCC	4 cut(s)	5, 132, 345, 1097
BmeT110I	CYCGRG	1 cut(s)	1157
BmgT120I	GGNCC	4 cut(s)	5, 132, 345, 1097
BmiI	GGNNCC	6 cut(s)	6, 346, 970, 1234, 1303, 1390
BmrFI	CCNGG	3 cut(s)	730, 1030, 1095
BmsI	GCATC	1 cut(s)	1205
BpmI	CTGGAG	1 cut(s)	148
Bpu10I	CCTNAGC	1 cut(s)	275
Bpu1102I	GCTNAGC	1 cut(s)	1313
BpuMI	CCSGG	1 cut(s)	1030
BsaAI	YACGTR	1 cut(s)	404
BsaBI	GATNNNNATC	2 cut(s)	19, 678
BsaHI	GRCGYC	1 cut(s)	450
BsaJI	CCNNGG	6 cut(s)	340, 472, 729, 898, 931, 1093
BsaWI	WCCGGW	2 cut(s)	327, 390
BsaXI	ACNNNNNCTCC	6 cut(s)	134, 164, 314, 344, 1133, 1163
Bsc4I	CCNNNNNNNGG	7 cut(s)	129, 407, 689, 1029, 1069, 1094, 1229
Bse118I	RCCGGY	3 cut(s)	327, 390, 1357
Bse1I	ACTGG	6 cut(s)	478, 547, 847, 877, 950, 1376
Bse21I	CCTNAGG	2 cut(s)	242, 1128
Bse3DI	GCAATG	2 cut(s)	1053, 1294
Bse8I	GATNNNNATC	2 cut(s)	19, 678
BseBI	CCWGG	2 cut(s)	730, 1095
BseDI	CCNNGG	6 cut(s)	340, 472, 729, 898, 931, 1093
BseGI	GGATG	2 cut(s)	611, 1220
BseJI	GATNNNNATC	2 cut(s)	19, 678
BseLI	CCNNNNNNNGG	7 cut(s)	129, 407, 689, 1029, 1069, 1094, 1229
BseMI	GCAATG	2 cut(s)	1053, 1294
BseMII	CTCAG	5 cut(s)	256, 289, 555, 1142, 1304
BseNI	ACTGG	6 cut(s)	478, 547, 847, 877, 950, 1376
BseRI	GAGGAG	6 cut(s)	106, 155, 335, 846, 1095, 1116
BseXI	GCAGC	2 cut(s)	1160, 1250
BseYI	CCCAGC	2 cut(s)	492, 975
Bsh1236I	CGCG	2 cut(s)	357, 398
Bsh1285I	CGRYCG	1 cut(s)	391
BshFI	GGCC	2 cut(s)	173, 477
BshNI	GGYRCC	3 cut(s)	968, 1232, 1388
BshTI	ACCGGT	2 cut(s)	327, 390
BsiEI	CGRYCG	1 cut(s)	391
BsiHKCI	CYCGRG	1 cut(s)	1157
BsiSI	CCGG	4 cut(s)	328, 391, 1029, 1358
BslFI	GGGAC	2 cut(s)	358, 898
BslI	CCNNNNNNNGG	7 cut(s)	129, 407, 689, 1029, 1069, 1094, 1229
BsmFI	GGGAC	2 cut(s)	358, 898
BsnI	GGCC	2 cut(s)	173, 477
BsoBI	CYCGRG	1 cut(s)	1157
Bsp1286I	GDGCHC	1 cut(s)	621
Bsp143I	GATC	8 cut(s)	14, 30, 39, 87, 225, 307, 412, 547
Bsp1720I	GCTNAGC	1 cut(s)	1313
Bsp19I	CCATGG	2 cut(s)	898, 931
BspACI	CCGC	4 cut(s)	72, 75, 355, 1023
BspANI	GGCC	2 cut(s)	173, 477
BspCNI	CTCAG	5 cut(s)	255, 288, 556, 1141, 1305
BspFNI	CGCG	2 cut(s)	357, 398
BspLI	GGNNCC	6 cut(s)	6, 346, 970, 1234, 1303, 1390
BspMI	ACCTGC	2 cut(s)	1178, 1247
BspPI	GGATC	1 cut(s)	34
BspT107I	GGYRCC	3 cut(s)	968, 1232, 1388
BsrDI	GCAATG	2 cut(s)	1053, 1294
BsrFI	RCCGGY	3 cut(s)	327, 390, 1357
BsrI	ACTGG	6 cut(s)	478, 547, 847, 877, 950, 1376
BssAI	RCCGGY	3 cut(s)	327, 390, 1357
BssECI	CCNNGG	6 cut(s)	340, 472, 729, 898, 931, 1093
BssMI	GATC	8 cut(s)	14, 30, 39, 87, 225, 307, 412, 547
BssNI	GRCGYC	1 cut(s)	450
BssT1I	CCWWGG	4 cut(s)	340, 472, 898, 931
Bst2UI	CCWGG	2 cut(s)	730, 1095
Bst4CI	ACNGT	5 cut(s)	156, 668, 879, 910, 1259
Bst6I	CTCTTC	1 cut(s)	50
BstACI	GRCGYC	1 cut(s)	450
BstAPI	GCANNNNNTGC	2 cut(s)	784, 1170
BstBAI	YACGTR	1 cut(s)	404
BstC8I	GCNNGC	3 cut(s)	124, 780, 973
BstDEI	CTNAG	5 cut(s)	242, 275, 564, 1128, 1313
BstDSI	CCRYGG	2 cut(s)	898, 931
BstENI	CCTNNNNNAGG	2 cut(s)	687, 1227
BstF5I	GGATG	2 cut(s)	611, 1220
BstFNI	CGCG	2 cut(s)	357, 398
BstH2I	RGCGCY	1 cut(s)	220
BstHHI	GCGC	4 cut(s)	219, 359, 400, 1353
BstKTI	GATC	8 cut(s)	17, 33, 42, 90, 228, 310, 415, 550
BstMBI	GATC	8 cut(s)	14, 30, 39, 87, 225, 307, 412, 547
BstMCI	CGRYCG	1 cut(s)	391
BstMWI	GCNNNNNNNGC	6 cut(s)	59, 119, 784, 1052, 1161, 1170
BstNI	CCWGG	2 cut(s)	730, 1095
BstNSI	RCATGY	2 cut(s)	85, 708
BstSCI	CCNGG	3 cut(s)	728, 1028, 1093
BstSFI	CTRYAG	1 cut(s)	715
BstUI	CGCG	2 cut(s)	357, 398
BstV1I	GCAGC	2 cut(s)	1160, 1250
BstX2I	RGATCY	1 cut(s)	225
BstYI	RGATCY	1 cut(s)	225
Bsu36I	CCTNAGG	2 cut(s)	242, 1128
BsuI	GTATCC	1 cut(s)	911
BsuRI	GGCC	2 cut(s)	173, 477
BtgI	CCRYGG	2 cut(s)	898, 931
BtgZI	GCGATG	2 cut(s)	9, 76
BtsCI	GGATG	2 cut(s)	611, 1220
BtsIMutI	CAGTG	4 cut(s)	152, 485, 673, 1369
BveI	ACCTGC	2 cut(s)	1178, 1247
Cac8I	GCNNGC	3 cut(s)	124, 780, 973
CaiI	CAGNNNCTG	1 cut(s)	1263
CfoI	GCGC	4 cut(s)	219, 359, 400, 1353
Cfr10I	RCCGGY	3 cut(s)	327, 390, 1357
Cfr13I	GGNCC	4 cut(s)	5, 132, 345, 1097
CseI	GACGC	2 cut(s)	434, 439
Csp6I	GTAC	6 cut(s)	10, 157, 325, 337, 394, 991
CspAI	ACCGGT	2 cut(s)	327, 390
CviAII	CATG	8 cut(s)	34, 55, 82, 622, 705, 899, 932, 963
CviQI	GTAC	6 cut(s)	10, 157, 325, 337, 394, 991
DdeI	CTNAG	5 cut(s)	242, 275, 564, 1128, 1313
DpnI	GATC	8 cut(s)	16, 32, 41, 89, 227, 309, 414, 549
DpnII	GATC	8 cut(s)	14, 30, 39, 87, 225, 307, 412, 547
DrdI	GACNNNNNNGTC	1 cut(s)	1280
DseDI	GACNNNNNNGTC	1 cut(s)	1280
EaeI	YGGCCR	1 cut(s)	171
Eam1104I	CTCTTC	1 cut(s)	50
EarI	CTCTTC	1 cut(s)	50
EciI	GGCGGA	1 cut(s)	61
Eco130I	CCWWGG	4 cut(s)	340, 472, 898, 931
Eco24I	GRGCYC	1 cut(s)	621
Eco47I	GGWCC	4 cut(s)	5, 132, 345, 1097
Eco47III	AGCGCT	1 cut(s)	218
Eco72I	CACGTG	1 cut(s)	404
Eco81I	CCTNAGG	2 cut(s)	242, 1128
Eco88I	CYCGRG	1 cut(s)	1157
EcoNI	CCTNNNNNAGG	2 cut(s)	687, 1227
EcoRI	GAATTC	2 cut(s)	842, 958
EcoRII	CCWGG	2 cut(s)	728, 1093
EcoT14I	CCWWGG	4 cut(s)	340, 472, 898, 931
EcoT38I	GRGCYC	1 cut(s)	621
ErhI	CCWWGG	4 cut(s)	340, 472, 898, 931
FaeI	CATG	8 cut(s)	37, 58, 85, 625, 708, 902, 935, 966
FaqI	GGGAC	2 cut(s)	358, 898
FatI	CATG	8 cut(s)	33, 54, 81, 621, 704, 898, 931, 962
FauI	CCCGC	1 cut(s)	362
Fnu4HI	GCNGC	3 cut(s)	75, 1174, 1264
FokI	GGATG	2 cut(s)	618, 1227
FriOI	GRGCYC	1 cut(s)	621
Fsp4HI	GCNGC	3 cut(s)	75, 1174, 1264
FspBI	CTAG	2 cut(s)	341, 893
GlaI	GCGC	4 cut(s)	218, 358, 399, 1352
GluI	GCNGC	3 cut(s)	75, 1174, 1264
GsaI	CCCAGC	2 cut(s)	496, 979
GsuI	CTGGAG	1 cut(s)	148
HaeII	RGCGCY	1 cut(s)	220
HaeIII	GGCC	2 cut(s)	173, 477
HapII	CCGG	4 cut(s)	328, 391, 1029, 1358
HgaI	GACGC	2 cut(s)	434, 439
HhaI	GCGC	4 cut(s)	219, 359, 400, 1353
Hin1I	GRCGYC	1 cut(s)	450
Hin1II	CATG	8 cut(s)	37, 58, 85, 625, 708, 902, 935, 966
Hin6I	GCGC	4 cut(s)	217, 357, 398, 1351
HinP1I	GCGC	4 cut(s)	217, 357, 398, 1351
HincII	GTYRAC	2 cut(s)	333, 457
HindII	GTYRAC	2 cut(s)	333, 457
HinfI	GANTC	4 cut(s)	525, 698, 746, 1081
HpaII	CCGG	4 cut(s)	328, 391, 1029, 1358
HphI	GGTGA	1 cut(s)	157
Hpy166II	GTNNAC	3 cut(s)	333, 457, 870
Hpy188I	TCNGA	6 cut(s)	294, 363, 565, 998, 1116, 1273
Hpy188III	TCNNGA	2 cut(s)	223, 1226
Hpy8I	GTNNAC	3 cut(s)	333, 457, 870
Hpy99I	CGWCG	3 cut(s)	140, 257, 455
HpyAV	CCTTC	8 cut(s)	202, 436, 440, 515, 596, 643, 821, 1223
HpyCH4III	ACNGT	5 cut(s)	156, 668, 879, 910, 1259
HpyCH4IV	ACGT	2 cut(s)	335, 403
HpyCH4V	TGCA	5 cut(s)	787, 1046, 1193, 1287, 1298
HpyF10VI	GCNNNNNNNGC	6 cut(s)	59, 119, 784, 1052, 1161, 1170
HpyF3I	CTNAG	5 cut(s)	242, 275, 564, 1128, 1313
HpySE526I	ACGT	2 cut(s)	335, 403
Hsp92I	GRCGYC	1 cut(s)	450
Hsp92II	CATG	8 cut(s)	37, 58, 85, 625, 708, 902, 935, 966
HspAI	GCGC	4 cut(s)	217, 357, 398, 1351
Kzo9I	GATC	8 cut(s)	14, 30, 39, 87, 225, 307, 412, 547
LmnI	GCTCC	1 cut(s)	1003
Lsp1109I	GCAGC	2 cut(s)	1160, 1250
LweI	GCATC	1 cut(s)	1205
MaeI	CTAG	2 cut(s)	341, 893
MaeII	ACGT	2 cut(s)	335, 403
MaeIII	GTNAC	6 cut(s)	150, 538, 707, 904, 1016, 1136
MalI	GATC	8 cut(s)	16, 32, 41, 89, 227, 309, 414, 549
MboI	GATC	8 cut(s)	14, 30, 39, 87, 225, 307, 412, 547
MboII	GAAGA	4 cut(s)	37, 220, 683, 767
MfeI	CAATTG	2 cut(s)	741, 810
MflI	RGATCY	1 cut(s)	225
MhlI	GDGCHC	1 cut(s)	621
MlsI	TGGCCA	1 cut(s)	173
MluCI	AATT	5 cut(s)	741, 810, 842, 958, 1041
MluNI	TGGCCA	1 cut(s)	173
MmeI	TCCRAC	2 cut(s)	339, 895
Mox20I	TGGCCA	1 cut(s)	173
MroXI	GAANNNNTTC	1 cut(s)	759
MscI	TGGCCA	1 cut(s)	173
MseI	TTAA	2 cut(s)	648, 1408
MslI	CAYNNNNRTG	1 cut(s)	998
Msp20I	TGGCCA	1 cut(s)	173
MspA1I	CMGCKG	3 cut(s)	126, 975, 1312
MspI	CCGG	4 cut(s)	328, 391, 1029, 1358
MspR9I	CCNGG	3 cut(s)	730, 1030, 1095
MunI	CAATTG	2 cut(s)	741, 810
MvaI	CCWGG	2 cut(s)	730, 1095
MvnI	CGCG	2 cut(s)	357, 398
MwoI	GCNNNNNNNGC	6 cut(s)	59, 119, 784, 1052, 1161, 1170
NciI	CCSGG	1 cut(s)	1030
NcoI	CCATGG	2 cut(s)	898, 931
NdeII	GATC	8 cut(s)	14, 30, 39, 87, 225, 307, 412, 547
NlaIII	CATG	8 cut(s)	37, 58, 85, 625, 708, 902, 935, 966
NlaIV	GGNNCC	6 cut(s)	6, 346, 970, 1234, 1303, 1390
NmuCI	GTSAC	4 cut(s)	150, 538, 707, 1136
NspI	RCATGY	2 cut(s)	85, 708
PaqCI	CACCTGC	2 cut(s)	1178, 1247
PciI	ACATGT	2 cut(s)	81, 704
PdmI	GAANNNNTTC	1 cut(s)	759
PfeI	GAWTC	4 cut(s)	525, 698, 746, 1081
PinAI	ACCGGT	2 cut(s)	327, 390
PkrI	GCNGC	3 cut(s)	76, 1175, 1265
PmaCI	CACGTG	1 cut(s)	404
PmlI	CACGTG	1 cut(s)	404
Ppu21I	YACGTR	1 cut(s)	404
PscI	ACATGT	2 cut(s)	81, 704
PsiI	TTATAA	1 cut(s)	597
Psp6I	CCWGG	2 cut(s)	728, 1093
PspCI	CACGTG	1 cut(s)	404
PspFI	CCCAGC	2 cut(s)	492, 975
PspGI	CCWGG	2 cut(s)	728, 1093
PspN4I	GGNNCC	6 cut(s)	6, 346, 970, 1234, 1303, 1390
PspPI	GGNCC	4 cut(s)	5, 132, 345, 1097
PstNI	CAGNNNCTG	1 cut(s)	1263
PsuI	RGATCY	1 cut(s)	225
PvuII	CAGCTG	3 cut(s)	126, 975, 1312
RsaI	GTAC	6 cut(s)	11, 158, 326, 338, 395, 992
RsaNI	GTAC	6 cut(s)	10, 157, 325, 337, 394, 991
RseI	CAYNNNNRTG	1 cut(s)	998
SaqAI	TTAA	2 cut(s)	648, 1408
SatI	GCNGC	3 cut(s)	75, 1174, 1264
Sau3AI	GATC	8 cut(s)	14, 30, 39, 87, 225, 307, 412, 547
Sau96I	GGNCC	4 cut(s)	5, 132, 345, 1097
ScrFI	CCNGG	3 cut(s)	730, 1030, 1095
SduI	GDGCHC	1 cut(s)	621
SfaNI	GCATC	1 cut(s)	1205
SfcI	CTRYAG	1 cut(s)	715
SinI	GGWCC	4 cut(s)	5, 132, 345, 1097
SmiMI	CAYNNNNRTG	1 cut(s)	998
Sse9I	AATT	5 cut(s)	741, 810, 842, 958, 1041
SsiI	CCGC	4 cut(s)	72, 75, 355, 1023
SspMI	CTAG	2 cut(s)	341, 893
StyD4I	CCNGG	3 cut(s)	728, 1028, 1093
StyI	CCWWGG	4 cut(s)	340, 472, 898, 931
TaaI	ACNGT	5 cut(s)	156, 668, 879, 910, 1259
TaiI	ACGT	2 cut(s)	338, 406
TaqI	TCGA	3 cut(s)	86, 252, 636
TaqII	GACCGA	2 cut(s)	149, 278
TasI	AATT	5 cut(s)	741, 810, 842, 958, 1041
TauI	GCSGC	1 cut(s)	77
TfiI	GAWTC	4 cut(s)	525, 698, 746, 1081
Tru1I	TTAA	2 cut(s)	648, 1408
Tru9I	TTAA	2 cut(s)	648, 1408
TscAI	CASTG	4 cut(s)	159, 485, 673, 1376
TseFI	GTSAC	4 cut(s)	150, 538, 707, 1136
TseI	GCWGC	2 cut(s)	1173, 1263
Tsp45I	GTSAC	4 cut(s)	150, 538, 707, 1136
TspDTI	ATGAA	6 cut(s)	238, 615, 631, 768, 846, 951
TspRI	CASTG	4 cut(s)	159, 485, 673, 1376
VpaK11BI	GGWCC	4 cut(s)	5, 132, 345, 1097
XagI	CCTNNNNNAGG	2 cut(s)	687, 1227
XapI	RAATTY	2 cut(s)	842, 958
XceI	RCATGY	2 cut(s)	85, 708
XcmI	CCANNNNNNNNNTGG	1 cut(s)	479
XmaJI	CCTAGG	1 cut(s)	340
XmnI	GAANNNNTTC	1 cut(s)	759
XspI	CTAG	2 cut(s)	341, 893

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.