RING-H2 zinc finger domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G45180 AT1G45180 AT1G45180 AT1G45180 AT5G42940 AT5G42940 |
| fragaria_vesca | FvH4_2g34090 FvH4_2g34090 |
| malus_domestica | MD08G1097400.v1.1 MD15G1079700.v1.1 |
| prunus_persica | Prupe.1G432700_v2.0.a1 |
| pyrus_communis | pycom08g07950 pycom15g07410 pycom15g07420 |
| rosa_chinensis | RchiOBHm_Chr6g0308261 |
| rosa_laevigata | RLG00000010653 |
| rosa_multiflora | Rmu_ssc0000355.1_g000008 |
| rosa_roxburghii | Rroxscaffold_7G00160310 |
| rosa_rugosa | Rorug06G0365500 Rorug06G0365600 Rorug06G0365700 Rorug06G0365800 |
| rosa_samantha | Rh6AG474500 Rh6BG485200 Rh6CG490200 Rh6DG476600 |
| rosa_wichuraiana | Rw6G041390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 437 |
| AccB1I | GGYRCC | 1 cut(s) | 1523 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 284, 812 |
| AccBSI | CCGCTC | 3 cut(s) | 271, 340, 1295 |
| AccII | CGCG | 1 cut(s) | 1210 |
| AciI | CCGC | 7 cut(s) | 271, 340, 455, 765, 1208, 1293, 1445 |
| AclWI | GGATC | 5 cut(s) | 299, 312, 548, 1260, 1990 |
| AcsI | RAATTY | 7 cut(s) | 178, 531, 928, 1288, 1324, 1731, 2110 |
| AcuI | CTGAAG | 3 cut(s) | 282, 336, 2120 |
| AdeI | CACNNNGTG | 1 cut(s) | 1211 |
| AfaI | GTAC | 3 cut(s) | 19, 64, 1269 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 284, 370, 812, 945, 1843 |
| AgeI | ACCGGT | 1 cut(s) | 1331 |
| AgsI | TTSAA | 8 cut(s) | 146, 327, 442, 858, 918, 1392, 1957, 2057 |
| AjnI | CCWGG | 4 cut(s) | 613, 1351, 1518, 1596 |
| AleI | CACNNNNGTG | 1 cut(s) | 1417 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1650, 1682 |
| AluBI | AGCT | 5 cut(s) | 320, 832, 1152, 1167, 1770 |
| AluI | AGCT | 5 cut(s) | 320, 832, 1152, 1167, 1770 |
| Alw21I | GWGCWC | 2 cut(s) | 834, 1922 |
| Alw26I | GTCTC | 7 cut(s) | 988, 1033, 1185, 1636, 1726, 1754, 1988 |
| AlwI | GGATC | 5 cut(s) | 299, 312, 548, 1260, 1990 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 433, 1277, 1409, 2082 |
| AoxI | GGCC | 1 cut(s) | 734 |
| ApeKI | GCWGC | 3 cut(s) | 320, 768, 1164 |
| ApoI | RAATTY | 7 cut(s) | 178, 531, 928, 1288, 1324, 1731, 2110 |
| AsiGI | ACCGGT | 1 cut(s) | 1331 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 736, 871, 1473 |
| AspLEI | GCGC | 1 cut(s) | 1905 |
| AspS9I | GGNCC | 1 cut(s) | 1033 |
| AsuC2I | CCSGG | 1 cut(s) | 1375 |
| AsuHPI | GGTGA | 5 cut(s) | 236, 479, 993, 1607, 1661 |
| AvaII | GGWCC | 1 cut(s) | 1033 |
| BaeGI | GKGCMC | 2 cut(s) | 1526, 2120 |
| BamHI | GGATCC | 1 cut(s) | 304 |
| BanI | GGYRCC | 1 cut(s) | 1523 |
| BanII | GRGCYC | 1 cut(s) | 834 |
| BbsI | GAAGAC | 3 cut(s) | 285, 675, 1001 |
| Bbv12I | GWGCWC | 2 cut(s) | 834, 1922 |
| BbvI | GCAGC | 3 cut(s) | 307, 780, 1176 |
| BccI | CCATC | 8 cut(s) | 207, 282, 599, 1125, 1630, 1646, 2027, 2129 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1436, 1470 |
| BciT130I | CCWGG | 4 cut(s) | 615, 1353, 1520, 1598 |
| BclI | TGATCA | 1 cut(s) | 1021 |
| BcnI | CCSGG | 1 cut(s) | 1375 |
| BcoDI | GTCTC | 7 cut(s) | 988, 1033, 1185, 1636, 1726, 1754, 1988 |
| BfaI | CTAG | 8 cut(s) | 44, 231, 237, 309, 543, 945, 1055, 1149 |
| BfmI | CTRYAG | 4 cut(s) | 78, 117, 933, 2133 |
| BfuAI | ACCTGC | 1 cut(s) | 437 |
| BglII | AGATCT | 1 cut(s) | 2041 |
| BisI | GCNGC | 5 cut(s) | 321, 341, 766, 769, 1165 |
| BlsI | GCNGC | 5 cut(s) | 322, 342, 767, 770, 1166 |
| Bme1390I | CCNGG | 5 cut(s) | 615, 1353, 1375, 1520, 1598 |
| Bme18I | GGWCC | 1 cut(s) | 1033 |
| BmgT120I | GGNCC | 1 cut(s) | 1033 |
| BmiI | GGNNCC | 7 cut(s) | 28, 306, 1425, 1517, 1525, 1551, 1668 |
| BmrFI | CCNGG | 5 cut(s) | 615, 1353, 1375, 1520, 1598 |
| BmrI | ACTGGG | 1 cut(s) | 147 |
| BmuI | ACTGGG | 1 cut(s) | 147 |
| BpiI | GAAGAC | 3 cut(s) | 285, 675, 1001 |
| Bpu10I | CCTNAGC | 2 cut(s) | 220, 773 |
| BpuEI | CTTGAG | 4 cut(s) | 226, 1138, 1210, 1369 |
| BpuMI | CCSGG | 1 cut(s) | 1375 |
| BsaAI | YACGTR | 1 cut(s) | 1419 |
| BsaI | GGTCTC | 2 cut(s) | 1033, 1754 |
| BsaJI | CCNNGG | 4 cut(s) | 55, 1519, 1597, 1619 |
| BsaWI | WCCGGW | 1 cut(s) | 1331 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 284, 370, 812, 945, 1843 |
| Bse118I | RCCGGY | 3 cut(s) | 1307, 1331, 1836 |
| Bse1I | ACTGG | 9 cut(s) | 153, 375, 408, 1016, 1082, 1165, 1384, 1504, 1801 |
| Bse3DI | GCAATG | 2 cut(s) | 1538, 1744 |
| BseBI | CCWGG | 4 cut(s) | 615, 1353, 1520, 1598 |
| BseDI | CCNNGG | 4 cut(s) | 55, 1519, 1597, 1619 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 284, 370, 812, 945, 1843 |
| BseMI | GCAATG | 2 cut(s) | 1538, 1744 |
| BseMII | CTCAG | 5 cut(s) | 243, 804, 1028, 1716, 2000 |
| BseNI | ACTGG | 9 cut(s) | 153, 375, 408, 1016, 1082, 1165, 1384, 1504, 1801 |
| BseRI | GAGGAG | 3 cut(s) | 350, 1155, 1895 |
| BseSI | GKGCMC | 2 cut(s) | 1526, 2120 |
| BseXI | GCAGC | 3 cut(s) | 307, 780, 1176 |
| BseYI | CCCAGC | 1 cut(s) | 993 |
| BsgI | GTGCAG | 1 cut(s) | 1395 |
| Bsh1236I | CGCG | 1 cut(s) | 1210 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1837 |
| BshFI | GGCC | 1 cut(s) | 736 |
| BshNI | GGYRCC | 1 cut(s) | 1523 |
| BshTI | ACCGGT | 1 cut(s) | 1331 |
| BsiEI | CGRYCG | 1 cut(s) | 1837 |
| BsiHKAI | GWGCWC | 2 cut(s) | 834, 1922 |
| BsiSI | CCGG | 4 cut(s) | 1308, 1332, 1375, 1837 |
| BslFI | GGGAC | 1 cut(s) | 201 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 284, 370, 812, 945, 1843 |
| BsmAI | GTCTC | 7 cut(s) | 988, 1033, 1185, 1636, 1726, 1754, 1988 |
| BsmFI | GGGAC | 1 cut(s) | 201 |
| BsmI | GAATGC | 5 cut(s) | 391, 448, 973, 997, 2055 |
| BsnI | GGCC | 1 cut(s) | 736 |
| Bso31I | GGTCTC | 2 cut(s) | 1033, 1754 |
| Bsp1286I | GDGCHC | 4 cut(s) | 834, 1526, 1922, 2120 |
| Bsp143I | GATC | 8 cut(s) | 82, 304, 553, 1021, 1252, 1481, 1982, 2041 |
| Bsp19I | CCATGG | 1 cut(s) | 55 |
| BspACI | CCGC | 7 cut(s) | 271, 340, 455, 765, 1208, 1293, 1445 |
| BspANI | GGCC | 1 cut(s) | 736 |
| BspCNI | CTCAG | 5 cut(s) | 244, 803, 1029, 1717, 1999 |
| BspFNI | CGCG | 1 cut(s) | 1210 |
| BspLI | GGNNCC | 7 cut(s) | 28, 306, 1425, 1517, 1525, 1551, 1668 |
| BspMAI | CTGCAG | 1 cut(s) | 121 |
| BspMI | ACCTGC | 1 cut(s) | 437 |
| BspPI | GGATC | 5 cut(s) | 299, 312, 548, 1260, 1990 |
| BspQI | GCTCTTC | 1 cut(s) | 1893 |
| BspT107I | GGYRCC | 1 cut(s) | 1523 |
| BspTNI | GGTCTC | 2 cut(s) | 1033, 1754 |
| BsrBI | CCGCTC | 3 cut(s) | 271, 340, 1295 |
| BsrDI | GCAATG | 2 cut(s) | 1538, 1744 |
| BsrFI | RCCGGY | 3 cut(s) | 1307, 1331, 1836 |
| BsrI | ACTGG | 9 cut(s) | 153, 375, 408, 1016, 1082, 1165, 1384, 1504, 1801 |
| BssAI | RCCGGY | 3 cut(s) | 1307, 1331, 1836 |
| BssECI | CCNNGG | 4 cut(s) | 55, 1519, 1597, 1619 |
| BssMI | GATC | 8 cut(s) | 82, 304, 553, 1021, 1252, 1481, 1982, 2041 |
| BssT1I | CCWWGG | 2 cut(s) | 55, 1619 |
| Bst2UI | CCWGG | 4 cut(s) | 615, 1353, 1520, 1598 |
| Bst4CI | ACNGT | 1 cut(s) | 681 |
| Bst6I | CTCTTC | 1 cut(s) | 1893 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 216, 452 |
| BstBAI | YACGTR | 1 cut(s) | 1419 |
| BstC8I | GCNNGC | 3 cut(s) | 763, 1699, 1772 |
| BstDEI | CTNAG | 7 cut(s) | 220, 252, 773, 790, 1037, 1725, 1986 |
| BstDSI | CCRYGG | 1 cut(s) | 55 |
| BstEII | GGTNACC | 1 cut(s) | 1592 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 943 |
| BstFNI | CGCG | 1 cut(s) | 1210 |
| BstHHI | GCGC | 1 cut(s) | 1905 |
| BstKTI | GATC | 8 cut(s) | 85, 307, 556, 1024, 1255, 1484, 1985, 2044 |
| BstMAI | GTCTC | 7 cut(s) | 988, 1033, 1185, 1636, 1726, 1754, 1988 |
| BstMBI | GATC | 8 cut(s) | 82, 304, 553, 1021, 1252, 1481, 1982, 2041 |
| BstMCI | CGRYCG | 1 cut(s) | 1837 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 40, 102, 216, 320, 452, 774, 1562 |
| BstNI | CCWGG | 4 cut(s) | 615, 1353, 1520, 1598 |
| BstPI | GGTNACC | 1 cut(s) | 1592 |
| BstSCI | CCNGG | 5 cut(s) | 613, 1351, 1373, 1518, 1596 |
| BstSFI | CTRYAG | 4 cut(s) | 78, 117, 933, 2133 |
| BstSLI | GKGCMC | 2 cut(s) | 1526, 2120 |
| BstUI | CGCG | 1 cut(s) | 1210 |
| BstV1I | GCAGC | 3 cut(s) | 307, 780, 1176 |
| BstV2I | GAAGAC | 3 cut(s) | 285, 675, 1001 |
| BstX2I | RGATCY | 3 cut(s) | 304, 1982, 2041 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1180 |
| BstYI | RGATCY | 3 cut(s) | 304, 1982, 2041 |
| BsuRI | GGCC | 1 cut(s) | 736 |
| BtgI | CCRYGG | 1 cut(s) | 55 |
| BtsIMutI | CAGTG | 3 cut(s) | 160, 306, 368 |
| BveI | ACCTGC | 1 cut(s) | 437 |
| Cac8I | GCNNGC | 3 cut(s) | 763, 1699, 1772 |
| CaiI | CAGNNNCTG | 4 cut(s) | 433, 1277, 1409, 2082 |
| CfoI | GCGC | 1 cut(s) | 1905 |
| Cfr10I | RCCGGY | 3 cut(s) | 1307, 1331, 1836 |
| Cfr13I | GGNCC | 1 cut(s) | 1033 |
| CsiI | ACCWGGT | 1 cut(s) | 613 |
| Csp6I | GTAC | 3 cut(s) | 18, 63, 1268 |
| CspAI | ACCGGT | 1 cut(s) | 1331 |
| CviQI | GTAC | 3 cut(s) | 18, 63, 1268 |
| DdeI | CTNAG | 7 cut(s) | 220, 252, 773, 790, 1037, 1725, 1986 |
| DpnI | GATC | 8 cut(s) | 84, 306, 555, 1023, 1254, 1483, 1984, 2043 |
| DpnII | GATC | 8 cut(s) | 82, 304, 553, 1021, 1252, 1481, 1982, 2041 |
| DraIII | CACNNNGTG | 1 cut(s) | 1211 |
| Eam1104I | CTCTTC | 1 cut(s) | 1893 |
| EarI | CTCTTC | 1 cut(s) | 1893 |
| Ecl136II | GAGCTC | 1 cut(s) | 832 |
| Eco130I | CCWWGG | 2 cut(s) | 55, 1619 |
| Eco147I | AGGCCT | 1 cut(s) | 736 |
| Eco24I | GRGCYC | 1 cut(s) | 834 |
| Eco31I | GGTCTC | 2 cut(s) | 1033, 1754 |
| Eco47I | GGWCC | 1 cut(s) | 1033 |
| Eco53kI | GAGCTC | 1 cut(s) | 832 |
| Eco57I | CTGAAG | 3 cut(s) | 282, 336, 2120 |
| Eco91I | GGTNACC | 1 cut(s) | 1592 |
| EcoICRI | GAGCTC | 1 cut(s) | 832 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 943 |
| EcoO65I | GGTNACC | 1 cut(s) | 1592 |
| EcoRI | GAATTC | 2 cut(s) | 178, 531 |
| EcoRII | CCWGG | 4 cut(s) | 613, 1351, 1518, 1596 |
| EcoT14I | CCWWGG | 2 cut(s) | 55, 1619 |
| EcoT38I | GRGCYC | 1 cut(s) | 834 |
| ErhI | CCWWGG | 2 cut(s) | 55, 1619 |
| FaqI | GGGAC | 1 cut(s) | 201 |
| FauI | CCCGC | 1 cut(s) | 448 |
| FbaI | TGATCA | 1 cut(s) | 1021 |
| Fnu4HI | GCNGC | 5 cut(s) | 321, 341, 766, 769, 1165 |
| FriOI | GRGCYC | 1 cut(s) | 834 |
| Fsp4HI | GCNGC | 5 cut(s) | 321, 341, 766, 769, 1165 |
| FspBI | CTAG | 8 cut(s) | 44, 231, 237, 309, 543, 945, 1055, 1149 |
| GlaI | GCGC | 1 cut(s) | 1904 |
| GluI | GCNGC | 5 cut(s) | 321, 341, 766, 769, 1165 |
| GsaI | CCCAGC | 1 cut(s) | 997 |
| HaeIII | GGCC | 1 cut(s) | 736 |
| HapII | CCGG | 4 cut(s) | 1308, 1332, 1375, 1837 |
| HhaI | GCGC | 1 cut(s) | 1905 |
| Hin6I | GCGC | 1 cut(s) | 1903 |
| HinP1I | GCGC | 1 cut(s) | 1903 |
| HinfI | GANTC | 7 cut(s) | 112, 430, 802, 854, 906, 1508, 1792 |
| HpaII | CCGG | 4 cut(s) | 1308, 1332, 1375, 1837 |
| HphI | GGTGA | 5 cut(s) | 236, 479, 993, 1607, 1661 |
| Hpy166II | GTNNAC | 5 cut(s) | 227, 1070, 1222, 1658, 2063 |
| Hpy188III | TCNNGA | 9 cut(s) | 263, 573, 851, 1155, 1227, 1796, 1832, 1895, 2018 |
| Hpy8I | GTNNAC | 5 cut(s) | 227, 1070, 1222, 1658, 2063 |
| Hpy99I | CGWCG | 2 cut(s) | 639, 1482 |
| HpyAV | CCTTC | 7 cut(s) | 579, 726, 747, 857, 872, 924, 1697 |
| HpyCH4III | ACNGT | 1 cut(s) | 681 |
| HpyCH4IV | ACGT | 2 cut(s) | 381, 1418 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 40, 102, 216, 320, 452, 774, 1562 |
| HpyF3I | CTNAG | 7 cut(s) | 220, 252, 773, 790, 1037, 1725, 1986 |
| HpySE526I | ACGT | 2 cut(s) | 381, 1418 |
| HspAI | GCGC | 1 cut(s) | 1903 |
| Ksp22I | TGATCA | 1 cut(s) | 1021 |
| Kzo9I | GATC | 8 cut(s) | 82, 304, 553, 1021, 1252, 1481, 1982, 2041 |
| LguI | GCTCTTC | 1 cut(s) | 1893 |
| LmnI | GCTCC | 4 cut(s) | 337, 1207, 1515, 1555 |
| Lsp1109I | GCAGC | 3 cut(s) | 307, 780, 1176 |
| MabI | ACCWGGT | 1 cut(s) | 613 |
| MaeI | CTAG | 8 cut(s) | 44, 231, 237, 309, 543, 945, 1055, 1149 |
| MaeII | ACGT | 2 cut(s) | 381, 1418 |
| MaeIII | GTNAC | 4 cut(s) | 704, 1592, 1677, 1709 |
| MalI | GATC | 8 cut(s) | 84, 306, 555, 1023, 1254, 1483, 1984, 2043 |
| MbiI | CCGCTC | 3 cut(s) | 271, 340, 1295 |
| MboI | GATC | 8 cut(s) | 82, 304, 553, 1021, 1252, 1481, 1982, 2041 |
| MflI | RGATCY | 3 cut(s) | 304, 1982, 2041 |
| MhlI | GDGCHC | 4 cut(s) | 834, 1526, 1922, 2120 |
| MlyI | GAGTC | 1 cut(s) | 1517 |
| MmeI | TCCRAC | 1 cut(s) | 574 |
| MroXI | GAANNNNTTC | 3 cut(s) | 736, 871, 1473 |
| MseI | TTAA | 3 cut(s) | 1127, 1328, 1928 |
| MslI | CAYNNNNRTG | 6 cut(s) | 465, 756, 978, 1129, 1417, 1650 |
| MspI | CCGG | 4 cut(s) | 1308, 1332, 1375, 1837 |
| MspR9I | CCNGG | 5 cut(s) | 615, 1353, 1375, 1520, 1598 |
| Mva1269I | GAATGC | 5 cut(s) | 391, 448, 973, 997, 2055 |
| MvaI | CCWGG | 4 cut(s) | 615, 1353, 1520, 1598 |
| MvnI | CGCG | 1 cut(s) | 1210 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 40, 102, 216, 320, 452, 774, 1562 |
| NciI | CCSGG | 1 cut(s) | 1375 |
| NcoI | CCATGG | 1 cut(s) | 55 |
| NdeII | GATC | 8 cut(s) | 82, 304, 553, 1021, 1252, 1481, 1982, 2041 |
| NlaIV | GGNNCC | 7 cut(s) | 28, 306, 1425, 1517, 1525, 1551, 1668 |
| NmeAIII | GCCGAG | 1 cut(s) | 1276 |
| OliI | CACNNNNGTG | 1 cut(s) | 1417 |
| PceI | AGGCCT | 1 cut(s) | 736 |
| PciSI | GCTCTTC | 1 cut(s) | 1893 |
| PctI | GAATGC | 5 cut(s) | 391, 448, 973, 997, 2055 |
| PdmI | GAANNNNTTC | 3 cut(s) | 736, 871, 1473 |
| PfeI | GAWTC | 6 cut(s) | 112, 430, 802, 854, 906, 1792 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 284, 812 |
| PfoI | TCCNGGA | 2 cut(s) | 1351, 1373 |
| PinAI | ACCGGT | 1 cut(s) | 1331 |
| PkrI | GCNGC | 5 cut(s) | 322, 342, 767, 770, 1166 |
| PleI | GAGTC | 1 cut(s) | 1516 |
| PpsI | GAGTC | 1 cut(s) | 1516 |
| Ppu21I | YACGTR | 1 cut(s) | 1419 |
| Psp124BI | GAGCTC | 1 cut(s) | 834 |
| Psp6I | CCWGG | 4 cut(s) | 613, 1351, 1518, 1596 |
| PspEI | GGTNACC | 1 cut(s) | 1592 |
| PspFI | CCCAGC | 1 cut(s) | 993 |
| PspGI | CCWGG | 4 cut(s) | 613, 1351, 1518, 1596 |
| PspN4I | GGNNCC | 7 cut(s) | 28, 306, 1425, 1517, 1525, 1551, 1668 |
| PspPI | GGNCC | 1 cut(s) | 1033 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 10, 42 |
| PstI | CTGCAG | 1 cut(s) | 121 |
| PstNI | CAGNNNCTG | 4 cut(s) | 433, 1277, 1409, 2082 |
| PsuI | RGATCY | 3 cut(s) | 304, 1982, 2041 |
| RsaI | GTAC | 3 cut(s) | 19, 64, 1269 |
| RsaNI | GTAC | 3 cut(s) | 18, 63, 1268 |
| RseI | CAYNNNNRTG | 6 cut(s) | 465, 756, 978, 1129, 1417, 1650 |
| SacI | GAGCTC | 1 cut(s) | 834 |
| SapI | GCTCTTC | 1 cut(s) | 1893 |
| SaqAI | TTAA | 3 cut(s) | 1127, 1328, 1928 |
| SatI | GCNGC | 5 cut(s) | 321, 341, 766, 769, 1165 |
| Sau3AI | GATC | 8 cut(s) | 82, 304, 553, 1021, 1252, 1481, 1982, 2041 |
| Sau96I | GGNCC | 1 cut(s) | 1033 |
| SchI | GAGTC | 1 cut(s) | 1517 |
| ScrFI | CCNGG | 5 cut(s) | 615, 1353, 1375, 1520, 1598 |
| SduI | GDGCHC | 4 cut(s) | 834, 1526, 1922, 2120 |
| SexAI | ACCWGGT | 1 cut(s) | 613 |
| SfcI | CTRYAG | 4 cut(s) | 78, 117, 933, 2133 |
| SinI | GGWCC | 1 cut(s) | 1033 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 465, 756, 978, 1129, 1417, 1650 |
| SmlI | CTYRAG | 4 cut(s) | 205, 1153, 1225, 1384 |
| SmoI | CTYRAG | 4 cut(s) | 205, 1153, 1225, 1384 |
| SseBI | AGGCCT | 1 cut(s) | 736 |
| SsiI | CCGC | 7 cut(s) | 271, 340, 455, 765, 1208, 1293, 1445 |
| SspMI | CTAG | 8 cut(s) | 44, 231, 237, 309, 543, 945, 1055, 1149 |
| SstI | GAGCTC | 1 cut(s) | 834 |
| StuI | AGGCCT | 1 cut(s) | 736 |
| StyD4I | CCNGG | 5 cut(s) | 613, 1351, 1373, 1518, 1596 |
| StyI | CCWWGG | 2 cut(s) | 55, 1619 |
| TaaI | ACNGT | 1 cut(s) | 681 |
| TaiI | ACGT | 2 cut(s) | 384, 1421 |
| TaqI | TCGA | 3 cut(s) | 535, 1456, 1480 |
| TatI | WGTACW | 1 cut(s) | 62 |
| TauI | GCSGC | 2 cut(s) | 343, 768 |
| TfiI | GAWTC | 6 cut(s) | 112, 430, 802, 854, 906, 1792 |
| Tru1I | TTAA | 3 cut(s) | 1127, 1328, 1928 |
| Tru9I | TTAA | 3 cut(s) | 1127, 1328, 1928 |
| TscAI | CASTG | 3 cut(s) | 160, 306, 375 |
| TseI | GCWGC | 3 cut(s) | 320, 768, 1164 |
| TspDTI | ATGAA | 6 cut(s) | 176, 207, 363, 612, 1388, 1569 |
| TspGWI | ACGGA | 3 cut(s) | 124, 887, 1696 |
| TspRI | CASTG | 3 cut(s) | 160, 306, 375 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 284, 812 |
| VpaK11BI | GGWCC | 1 cut(s) | 1033 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 943 |
| XapI | RAATTY | 7 cut(s) | 178, 531, 928, 1288, 1324, 1731, 2110 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 285 |
| XmnI | GAANNNNTTC | 3 cut(s) | 736, 871, 1473 |
| XspI | CTAG | 8 cut(s) | 44, 231, 237, 309, 543, 945, 1055, 1149 |