Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0006157

Physical Location & Seq

Genomic Coordinates Forward (+)

51324218 .. 51325721

Gene Structure 1504 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0365800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1224 bp

ATGGGAGAGATATTGGGGGAAGCATTTCATTTGAGCTCCCAGGAATTAGCTAATCTTGACAATACTATTAGTGAGTTCATTGTTGCGGGTAAGTGGGTACTTCCTGATATTTTTGCTCAAGTGTTTCCTGAGATAGCTGCGTCTCTTACTTCCATTACACTACCTTTAGTGCCAACTAATGATCAAGTGGTTTGGTCTGAATCTTCTTCTGCGATCCAACCACGGAAGAGTATTTGCTCTTGGAAAATTTTACATAAGAAAATTCTTACAGATGCGAGGCTTCAGAGACTGGGTGTTTCCCTTTGTTCTAGGTGTAGTCTTTGTGGGGCAGGATTTGAAAATTGGTGTCACTTGTTTTTGGGATGCCCAGCAGTGTTAGAGGTTTGGAAGTGGTGTTTTGGCATGTTTAATATTGCATTCCATCAGCCGGCCTCCTTGCATGATATAATTAATATAGATTTCATCTCACACCTCTCCACTTCTTCCAAGCTTCTTTGGCGCATAGCGGTGTGCAATGTTTTGTGGTGTGTTTGGTCAGAGAGAAATCGCTTGCGGCATGATGGCGGTATGTTTATCTGGAGTAATTTCATGCATTTTCTAACCTCAGCTTTACGGGAGTCGGCTAGCTTGGCCTTTGCATCATCCAACTCTCAATCTGGGCCTCCTATTTTTGGTCTCCTGCATCTTTCGCCTCTGAGGCCTTGTGCCCCTAAGTTTACTATGGTCACTTGGCTGCCTCCGCCATCTCCATGGATAAAAGTCAATGTCGATGGGTCGTTCAGATGTCAAGACCAGGCAGGCTTTGGCGGCATAGCCCGGGATCATGACGGTGCTTTCATCTTTGCCTTCGCTTCACGTGTGTGTGTTCCCAGTTCTCTCGATGCTGAGGTACTGGCCTTTATTGAAGCTATAAAGGTGGCCATGTTGCAGGAATGGCAGTATGTGTGGGTCGAAACGGACTCAGCAGTTCTCCTGAGGTATTTTGTTTCTCCAAATCTGATTCCTTGGCGGCTGCGTGTACAATGGTTCAATTGTCTAGCTCTTGCTCAACAGTTGCATCTGCATGTTTCTCACATCTTTAGGGAAGGAAATTCTCCTGCTGATACGTTGGCTAATTACGGAGCGTCGCATGTGGGAAGGAGTACGTGGTCTTCTTTACCTTCATTCTTGGCAGTTGACTATGGGCGTGACTTCTCATCTAGGCCAATCTATAGGTTCTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008285 GO:0009056 GO:0009057 GO:0009791 GO:0009908 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0019941 GO:0022414 GO:0030163 GO:0031624 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0040008 GO:0042127 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044390 GO:0045926 GO:0046620 GO:0046621 GO:0048367 GO:0048437 GO:0048518 GO:0048519 GO:0048523 GO:0048608 GO:0048638 GO:0048640 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051094 GO:0051239 GO:0051240 GO:0051241 GO:0051603 GO:0051865 GO:0061458 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0090567 GO:0099402 GO:0140096 GO:1900055 GO:1900057 GO:1901564 GO:1901565 GO:1901575 GO:1905623 GO:2000024 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

407

Amino Acids

45.69

Weight (kDa)

7.2

Isoelectric Point (pI)

43.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RVT	PF13966	62 - 129	4e-12	zinc-binding in reverse transcriptase
RVT_3	PF13456	255 - 373	1.5e-17	Reverse transcriptase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006157)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G45180 AT1G45180 AT1G45180 AT1G45180 AT5G42940 AT5G42940
fragaria_vesca	FvH4_2g34090 FvH4_2g34090
malus_domestica	MD08G1097400.v1.1 MD15G1079700.v1.1
prunus_persica	Prupe.1G432700_v2.0.a1
pyrus_communis	pycom08g07950 pycom15g07410 pycom15g07420
rosa_chinensis	RchiOBHm_Chr6g0308261
rosa_laevigata	RLG00000010653
rosa_multiflora	Rmu_ssc0000355.1_g000008
rosa_roxburghii	Rroxscaffold_7G00160310
rosa_rugosa	Rorug06G0365500 Rorug06G0365600 Rorug06G0365700 Rorug06G0365800
rosa_samantha	Rh6AG474500 Rh6BG485200 Rh6CG490200 Rh6DG476600
rosa_wichuraiana	Rw6G041390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	7 cut(s)	86, 506, 553, 564, 740, 807, 1009
AclWI	GGATC	2 cut(s)	208, 828
AcoI	YGGCCR	1 cut(s)	918
AcsI	RAATTY	3 cut(s)	246, 261, 1090
AcuI	CTGAAG	1 cut(s)	266
AcvI	CACGTG	1 cut(s)	857
AfaI	GTAC	4 cut(s)	99, 891, 1020, 1144
AfiI	CCNNNNNNNGG	2 cut(s)	427, 671
AflIII	ACRYGT	1 cut(s)	856
AgsI	TTSAA	3 cut(s)	338, 905, 1030
AjnI	CCWGG	2 cut(s)	39, 792
AleI	CACNNNNGTG	1 cut(s)	859
AluBI	AGCT	8 cut(s)	36, 50, 137, 490, 608, 627, 908, 1040
AluI	AGCT	8 cut(s)	36, 50, 137, 490, 608, 627, 908, 1040
Alw21I	GWGCWC	1 cut(s)	38
Alw26I	GTCTC	3 cut(s)	147, 280, 680
AlwI	GGATC	2 cut(s)	208, 828
AlwNI	CAGNNNCTG	1 cut(s)	289
Ama87I	CYCGRG	1 cut(s)	816
AoxI	GGCC	7 cut(s)	429, 630, 659, 698, 894, 918, 1202
ApeKI	GCWGC	3 cut(s)	137, 733, 1012
ApoI	RAATTY	3 cut(s)	246, 261, 1090
AseI	ATTAAT	1 cut(s)	450
Asp700I	GAANNNNTTC	1 cut(s)	24
AspLEI	GCGC	1 cut(s)	501
AspS9I	GGNCC	1 cut(s)	659
AsuC2I	CCSGG	2 cut(s)	817, 818
AsuNHI	GCTAGC	1 cut(s)	623
AvaI	CYCGRG	1 cut(s)	816
AxyI	CCTNAGG	1 cut(s)	974
BaeGI	GKGCMC	1 cut(s)	709
BalI	TGGCCA	1 cut(s)	920
BanII	GRGCYC	1 cut(s)	38
BarI	GAAGNNNNNNTAC	2 cut(s)	1135, 1167
BbrPI	CACGTG	1 cut(s)	857
BbsI	GAAGAC	1 cut(s)	1143
Bbv12I	GWGCWC	1 cut(s)	38
BbvCI	CCTCAGC	2 cut(s)	604, 885
BbvI	GCAGC	3 cut(s)	124, 720, 999
BccI	CCATC	4 cut(s)	429, 554, 751, 764
BciT130I	CCWGG	2 cut(s)	41, 794
BclI	TGATCA	1 cut(s)	181
BcnI	CCSGG	2 cut(s)	817, 818
BcoDI	GTCTC	3 cut(s)	147, 280, 680
BfaI	CTAG	4 cut(s)	309, 624, 1037, 1200
BfmI	CTRYAG	1 cut(s)	1210
BglI	GCCNNNNNGGC	1 cut(s)	697
BisI	GCNGC	6 cut(s)	138, 554, 734, 808, 1010, 1013
BlsI	GCNGC	6 cut(s)	139, 555, 735, 809, 1011, 1014
Bme1390I	CCNGG	4 cut(s)	41, 794, 817, 818
BmeT110I	CYCGRG	1 cut(s)	816
BmgT120I	GGNCC	1 cut(s)	659
BmrFI	CCNGG	4 cut(s)	41, 794, 817, 818
BmrI	ACTGGG	2 cut(s)	299, 864
BmsI	GCATC	6 cut(s)	262, 353, 647, 691, 871, 1066
BmtI	GCTAGC	1 cut(s)	627
BmuI	ACTGGG	2 cut(s)	299, 864
BpiI	GAAGAC	1 cut(s)	1143
BpmI	CTGGAG	1 cut(s)	598
Bpu10I	CCTNAGC	2 cut(s)	604, 885
BpuEI	CTTGAG	1 cut(s)	102
BpuMI	CCSGG	2 cut(s)	817, 818
BsaAI	YACGTR	2 cut(s)	857, 1146
BsaI	GGTCTC	1 cut(s)	680
BsaJI	CCNNGG	5 cut(s)	39, 221, 749, 816, 1004
Bsc4I	CCNNNNNNNGG	2 cut(s)	427, 671
Bse118I	RCCGGY	1 cut(s)	427
Bse1I	ACTGG	3 cut(s)	294, 870, 897
Bse21I	CCTNAGG	1 cut(s)	974
Bse3DI	GCAATG	1 cut(s)	520
BseBI	CCWGG	2 cut(s)	41, 794
BseDI	CCNNGG	5 cut(s)	39, 221, 749, 816, 1004
BseGI	GGATG	2 cut(s)	368, 641
BseLI	CCNNNNNNNGG	2 cut(s)	427, 671
BseMI	GCAATG	1 cut(s)	520
BseMII	CTCAG	6 cut(s)	120, 618, 686, 876, 965, 975
BseNI	ACTGG	3 cut(s)	294, 870, 897
BseSI	GKGCMC	1 cut(s)	709
BseXI	GCAGC	3 cut(s)	124, 720, 999
BseYI	CCCAGC	1 cut(s)	367
BshFI	GGCC	7 cut(s)	431, 632, 661, 700, 896, 920, 1204
BsiHKAI	GWGCWC	1 cut(s)	38
BsiHKCI	CYCGRG	1 cut(s)	816
BsiSI	CCGG	2 cut(s)	428, 817
BslI	CCNNNNNNNGG	2 cut(s)	427, 671
BsmAI	GTCTC	3 cut(s)	147, 280, 680
BsmBI	CGTCTC	1 cut(s)	147
BsmI	GAATGC	1 cut(s)	416
BsnI	GGCC	7 cut(s)	431, 632, 661, 700, 896, 920, 1204
Bso31I	GGTCTC	1 cut(s)	680
BsoBI	CYCGRG	1 cut(s)	816
Bsp1286I	GDGCHC	2 cut(s)	38, 709
Bsp1407I	TGTACA	1 cut(s)	1018
Bsp143I	GATC	3 cut(s)	181, 213, 820
Bsp19I	CCATGG	1 cut(s)	749
BspACI	CCGC	7 cut(s)	86, 506, 553, 564, 740, 807, 1009
BspANI	GGCC	7 cut(s)	431, 632, 661, 700, 896, 920, 1204
BspCNI	CTCAG	6 cut(s)	121, 617, 687, 877, 966, 974
BspHI	TCATGA	1 cut(s)	823
BspOI	GCTAGC	1 cut(s)	627
BspPI	GGATC	2 cut(s)	208, 828
BspTNI	GGTCTC	1 cut(s)	680
BsrDI	GCAATG	1 cut(s)	520
BsrFI	RCCGGY	1 cut(s)	427
BsrGI	TGTACA	1 cut(s)	1018
BsrI	ACTGG	3 cut(s)	294, 870, 897
BssAI	RCCGGY	1 cut(s)	427
BssECI	CCNNGG	5 cut(s)	39, 221, 749, 816, 1004
BssMI	GATC	3 cut(s)	181, 213, 820
BssT1I	CCWWGG	2 cut(s)	749, 1004
Bst2UI	CCWGG	2 cut(s)	41, 794
Bst4CI	ACNGT	2 cut(s)	830, 1053
Bst6I	CTCTTC	1 cut(s)	221
BstAUI	TGTACA	1 cut(s)	1018
BstBAI	YACGTR	2 cut(s)	857, 1146
BstC8I	GCNNGC	4 cut(s)	429, 551, 625, 799
BstDEI	CTNAG	7 cut(s)	129, 604, 695, 711, 885, 961, 974
BstDSI	CCRYGG	2 cut(s)	221, 749
BstF5I	GGATG	2 cut(s)	368, 641
BstHHI	GCGC	1 cut(s)	501
BstKTI	GATC	3 cut(s)	184, 216, 823
BstMAI	GTCTC	3 cut(s)	147, 280, 680
BstMBI	GATC	3 cut(s)	181, 213, 820
BstMWI	GCNNNNNNNGC	7 cut(s)	496, 629, 688, 697, 739, 807, 934
BstNI	CCWGG	2 cut(s)	41, 794
BstNSI	RCATGY	3 cut(s)	406, 1067, 1133
BstSCI	CCNGG	4 cut(s)	39, 792, 815, 816
BstSFI	CTRYAG	1 cut(s)	1210
BstSLI	GKGCMC	1 cut(s)	709
BstV1I	GCAGC	3 cut(s)	124, 720, 999
BstV2I	GAAGAC	1 cut(s)	1143
BstXI	CCANNNNNNTGG	1 cut(s)	750
Bsu36I	CCTNAGG	1 cut(s)	974
BsuRI	GGCC	7 cut(s)	431, 632, 661, 700, 896, 920, 1204
BtgI	CCRYGG	2 cut(s)	221, 749
BtsCI	GGATG	2 cut(s)	368, 641
BtsI	GCAGTG	1 cut(s)	378
BtsIMutI	CAGTG	1 cut(s)	378
Cac8I	GCNNGC	4 cut(s)	429, 551, 625, 799
CaiI	CAGNNNCTG	1 cut(s)	289
CciI	TCATGA	1 cut(s)	823
CfoI	GCGC	1 cut(s)	501
Cfr10I	RCCGGY	1 cut(s)	427
Cfr13I	GGNCC	1 cut(s)	659
Cfr9I	CCCGGG	1 cut(s)	816
CseI	GACGC	2 cut(s)	129, 1113
Csp6I	GTAC	4 cut(s)	98, 890, 1019, 1143
CviAII	CATG	9 cut(s)	403, 440, 557, 589, 750, 824, 922, 1064, 1130
CviQI	GTAC	4 cut(s)	98, 890, 1019, 1143
DdeI	CTNAG	7 cut(s)	129, 604, 695, 711, 885, 961, 974
DpnI	GATC	3 cut(s)	183, 215, 822
DpnII	GATC	3 cut(s)	181, 213, 820
EaeI	YGGCCR	1 cut(s)	918
Eam1104I	CTCTTC	1 cut(s)	221
EarI	CTCTTC	1 cut(s)	221
EciI	GGCGGA	1 cut(s)	729
Ecl136II	GAGCTC	1 cut(s)	36
Eco130I	CCWWGG	2 cut(s)	749, 1004
Eco147I	AGGCCT	1 cut(s)	700
Eco24I	GRGCYC	1 cut(s)	38
Eco31I	GGTCTC	1 cut(s)	680
Eco53kI	GAGCTC	1 cut(s)	36
Eco57I	CTGAAG	1 cut(s)	266
Eco72I	CACGTG	1 cut(s)	857
Eco81I	CCTNAGG	1 cut(s)	974
Eco88I	CYCGRG	1 cut(s)	816
EcoICRI	GAGCTC	1 cut(s)	36
EcoRII	CCWGG	2 cut(s)	39, 792
EcoT14I	CCWWGG	2 cut(s)	749, 1004
EcoT22I	ATGCAT	1 cut(s)	594
EcoT38I	GRGCYC	1 cut(s)	38
ErhI	CCWWGG	2 cut(s)	749, 1004
Esp3I	CGTCTC	1 cut(s)	147
FaeI	CATG	9 cut(s)	406, 443, 560, 592, 753, 827, 925, 1067, 1133
FatI	CATG	9 cut(s)	402, 439, 556, 588, 749, 823, 921, 1063, 1129
FauI	CCCGC	1 cut(s)	79
FbaI	TGATCA	1 cut(s)	181
Fnu4HI	GCNGC	6 cut(s)	138, 554, 734, 808, 1010, 1013
FokI	GGATG	2 cut(s)	375, 628
FriOI	GRGCYC	1 cut(s)	38
Fsp4HI	GCNGC	6 cut(s)	138, 554, 734, 808, 1010, 1013
FspBI	CTAG	4 cut(s)	309, 624, 1037, 1200
GlaI	GCGC	1 cut(s)	500
GluI	GCNGC	6 cut(s)	138, 554, 734, 808, 1010, 1013
GsaI	CCCAGC	1 cut(s)	371
GsuI	CTGGAG	1 cut(s)	598
HaeIII	GGCC	7 cut(s)	431, 632, 661, 700, 896, 920, 1204
HapII	CCGG	2 cut(s)	428, 817
HgaI	GACGC	2 cut(s)	129, 1113
HhaI	GCGC	1 cut(s)	501
Hin1II	CATG	9 cut(s)	406, 443, 560, 592, 753, 827, 925, 1067, 1133
Hin6I	GCGC	1 cut(s)	499
HinP1I	GCGC	1 cut(s)	499
HincII	GTYRAC	1 cut(s)	1177
HindII	GTYRAC	1 cut(s)	1177
HindIII	AAGCTT	1 cut(s)	488
HinfI	GANTC	4 cut(s)	200, 617, 959, 1000
HpaII	CCGG	2 cut(s)	428, 817
Hpy166II	GTNNAC	3 cut(s)	717, 1019, 1177
Hpy188I	TCNGA	6 cut(s)	199, 285, 538, 696, 782, 999
Hpy188III	TCNNGA	9 cut(s)	56, 104, 128, 577, 788, 824, 878, 973, 1221
Hpy8I	GTNNAC	3 cut(s)	717, 1019, 1177
Hpy99I	CGWCG	1 cut(s)	1129
HpyAV	CCTTC	4 cut(s)	856, 1079, 1131, 1170
HpyCH4III	ACNGT	2 cut(s)	830, 1053
HpyCH4IV	ACGT	3 cut(s)	856, 1106, 1145
HpyCH4V	TGCA	9 cut(s)	416, 439, 513, 592, 638, 682, 928, 1057, 1063
HpyF10VI	GCNNNNNNNGC	7 cut(s)	496, 629, 688, 697, 739, 807, 934
HpyF3I	CTNAG	7 cut(s)	129, 604, 695, 711, 885, 961, 974
HpySE526I	ACGT	3 cut(s)	856, 1106, 1145
Hsp92II	CATG	9 cut(s)	406, 443, 560, 592, 753, 827, 925, 1067, 1133
HspAI	GCGC	1 cut(s)	499
KroI	GCCGGC	1 cut(s)	427
KroNI	GCCGGC	1 cut(s)	429
Ksp22I	TGATCA	1 cut(s)	181
Kzo9I	GATC	3 cut(s)	181, 213, 820
LmnI	GCTCC	2 cut(s)	41, 1121
Lsp1109I	GCAGC	3 cut(s)	124, 720, 999
LweI	GCATC	6 cut(s)	262, 353, 647, 691, 871, 1066
MaeI	CTAG	4 cut(s)	309, 624, 1037, 1200
MaeII	ACGT	3 cut(s)	856, 1106, 1145
MaeIII	GTNAC	3 cut(s)	347, 724, 1187
MalI	GATC	3 cut(s)	183, 215, 822
MboI	GATC	3 cut(s)	181, 213, 820
MboII	GAAGA	5 cut(s)	195, 198, 238, 474, 1143
MfeI	CAATTG	1 cut(s)	1030
MhlI	GDGCHC	2 cut(s)	38, 709
MlsI	TGGCCA	1 cut(s)	920
MluCI	AATT	9 cut(s)	44, 246, 261, 340, 447, 583, 1030, 1090, 1114
MluNI	TGGCCA	1 cut(s)	920
MlyI	GAGTC	2 cut(s)	626, 953
MmeI	TCCRAC	2 cut(s)	241, 669
Mox20I	TGGCCA	1 cut(s)	920
Mph1103I	ATGCAT	1 cut(s)	594
MroNI	GCCGGC	1 cut(s)	427
MroXI	GAANNNNTTC	1 cut(s)	24
MscI	TGGCCA	1 cut(s)	920
MseI	TTAA	2 cut(s)	408, 450
MslI	CAYNNNNRTG	5 cut(s)	506, 748, 828, 859, 1062
Msp20I	TGGCCA	1 cut(s)	920
MspI	CCGG	2 cut(s)	428, 817
MspR9I	CCNGG	4 cut(s)	41, 794, 817, 818
MunI	CAATTG	1 cut(s)	1030
Mva1269I	GAATGC	1 cut(s)	416
MvaI	CCWGG	2 cut(s)	41, 794
MwoI	GCNNNNNNNGC	7 cut(s)	496, 629, 688, 697, 739, 807, 934
NaeI	GCCGGC	1 cut(s)	429
NciI	CCSGG	2 cut(s)	817, 818
NcoI	CCATGG	1 cut(s)	749
NdeII	GATC	3 cut(s)	181, 213, 820
NgoMIV	GCCGGC	1 cut(s)	427
NheI	GCTAGC	1 cut(s)	623
NlaIII	CATG	9 cut(s)	406, 443, 560, 592, 753, 827, 925, 1067, 1133
NmuCI	GTSAC	3 cut(s)	347, 724, 1187
NsiI	ATGCAT	1 cut(s)	594
NspI	RCATGY	3 cut(s)	406, 1067, 1133
OliI	CACNNNNGTG	1 cut(s)	859
PagI	TCATGA	1 cut(s)	823
PceI	AGGCCT	1 cut(s)	700
PctI	GAATGC	1 cut(s)	416
PdiI	GCCGGC	1 cut(s)	429
PdmI	GAANNNNTTC	1 cut(s)	24
PfeI	GAWTC	2 cut(s)	200, 1000
PkrI	GCNGC	6 cut(s)	139, 555, 735, 809, 1011, 1014
PleI	GAGTC	2 cut(s)	625, 953
PmaCI	CACGTG	1 cut(s)	857
PmlI	CACGTG	1 cut(s)	857
PpsI	GAGTC	2 cut(s)	625, 953
Ppu21I	YACGTR	2 cut(s)	857, 1146
PshBI	ATTAAT	1 cut(s)	450
Psp124BI	GAGCTC	1 cut(s)	38
Psp6I	CCWGG	2 cut(s)	39, 792
PspCI	CACGTG	1 cut(s)	857
PspFI	CCCAGC	1 cut(s)	367
PspGI	CCWGG	2 cut(s)	39, 792
PspPI	GGNCC	1 cut(s)	659
PstNI	CAGNNNCTG	1 cut(s)	289
RsaI	GTAC	4 cut(s)	99, 891, 1020, 1144
RsaNI	GTAC	4 cut(s)	98, 890, 1019, 1143
RseI	CAYNNNNRTG	5 cut(s)	506, 748, 828, 859, 1062
SacI	GAGCTC	1 cut(s)	38
SaqAI	TTAA	2 cut(s)	408, 450
SatI	GCNGC	6 cut(s)	138, 554, 734, 808, 1010, 1013
Sau3AI	GATC	3 cut(s)	181, 213, 820
Sau96I	GGNCC	1 cut(s)	659
SchI	GAGTC	2 cut(s)	626, 953
ScrFI	CCNGG	4 cut(s)	41, 794, 817, 818
SduI	GDGCHC	2 cut(s)	38, 709
SfaNI	GCATC	6 cut(s)	262, 353, 647, 691, 871, 1066
SfcI	CTRYAG	1 cut(s)	1210
SmaI	CCCGGG	1 cut(s)	818
SmiMI	CAYNNNNRTG	5 cut(s)	506, 748, 828, 859, 1062
SmlI	CTYRAG	1 cut(s)	117
SmoI	CTYRAG	1 cut(s)	117
Sse9I	AATT	9 cut(s)	44, 246, 261, 340, 447, 583, 1030, 1090, 1114
SseBI	AGGCCT	1 cut(s)	700
SsiI	CCGC	7 cut(s)	86, 506, 553, 564, 740, 807, 1009
SspI	AATATT	1 cut(s)	412
SspMI	CTAG	4 cut(s)	309, 624, 1037, 1200
SstI	GAGCTC	1 cut(s)	38
StuI	AGGCCT	1 cut(s)	700
StyD4I	CCNGG	4 cut(s)	39, 792, 815, 816
StyI	CCWWGG	2 cut(s)	749, 1004
TaaI	ACNGT	2 cut(s)	830, 1053
TaiI	ACGT	3 cut(s)	859, 1109, 1148
TaqI	TCGA	3 cut(s)	768, 879, 951
TasI	AATT	9 cut(s)	44, 246, 261, 340, 447, 583, 1030, 1090, 1114
TatI	WGTACW	1 cut(s)	1018
TauI	GCSGC	3 cut(s)	556, 810, 1012
TfiI	GAWTC	2 cut(s)	200, 1000
Tru1I	TTAA	2 cut(s)	408, 450
Tru9I	TTAA	2 cut(s)	408, 450
TscAI	CASTG	1 cut(s)	378
TseFI	GTSAC	3 cut(s)	347, 724, 1187
TseI	GCWGC	3 cut(s)	137, 733, 1012
Tsp45I	GTSAC	3 cut(s)	347, 724, 1187
TspDTI	ATGAA	6 cut(s)	17, 67, 451, 577, 826, 1152
TspGWI	ACGGA	3 cut(s)	238, 971, 1134
TspMI	CCCGGG	1 cut(s)	816
TspRI	CASTG	1 cut(s)	378
VspI	ATTAAT	1 cut(s)	450
XapI	RAATTY	3 cut(s)	246, 261, 1090
XceI	RCATGY	3 cut(s)	406, 1067, 1133
XcmI	CCANNNNNNNNNTGG	1 cut(s)	800
XmaI	CCCGGG	1 cut(s)	816
XmnI	GAANNNNTTC	1 cut(s)	24
XspI	CTAG	4 cut(s)	309, 624, 1037, 1200
Zsp2I	ATGCAT	1 cut(s)	594

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.