Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0006157

Physical Location & Seq

Genomic Coordinates Forward (+)

3355048 .. 3357993

Gene Structure 2946 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000010653

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

ATGCAAGGGCAGAGGGGTACTATCGGTTCCTTGCCTGAAATGCTAGATTTTGACCATGGGAATACGTCGAATGATGCTGCTTTAGATCAGCAGATTTGCTGGAATGGCACTCGGAATCCTGTAGAAAGTCGGATTCCTGACTATATACAATCACCCACTGATATGAATGTTGGTTTTGGGAATTCCATTGGTCATGAACGTCAGAACTTAGGCAGATGGTGCTTAGGTGAACCTAGTTCTAGAAACTCACAGGGTGAAGTAAGTCGTGATGAGCGGAAACCAGATTTTGGATGGTCATCTTCAGTGGATGCTTGTGGTGAAGCTGGTCTGAGGTTAGAGGAGCGGCGCTATGAACCAACTGATAACCTTTCACTGGACAACAATGTGAATACTATTTTTACACCAAGTTCCAATTCTGATGCAGCTTCACAGCATCTGAACTTGAATGCAGGTTTCACTGGTCATGGTGGTGATGGTAGTCAAGTTATGGAATGTCCCAACACATACAAGTATAATGTCACTGAAAATGAGCGGACTCATCCTACTGGTAATTCTGATCCTTTTATGCTTCCTGCTGCAAGTACTGGATTTTTAGTGGGAGAAAATGATGGCAGACCTGGTTGTTCATTGGAGGGTCGCCGTGTATCTTGCAAAAGAAAGACTATGGAGGGACACTTAGGACAGTCTTCTTTAAGTGGAAGTTGTAGTTACTTTCAGCATACAGAAAGTGGTGCAAGGCCTTCTCTCCCTGCTCACTATAATGCAGGCATAAACATATCTACTCCATCACAAGAGGGAAATCCAAGACCTGGAGCAGGTGGTAGAGAACTTACTTTTGACAGCATTCCTGATTCAAATGTTGGAAGAAGCTCAGAAAGTTCTCACAGAAACTTCCGTGTGAGAATAAATCCATCCAATCAACAAAACACTATCCCCTCAAGTAGGTTCTCAAGTGGGAGGGCTGCTAGGCATTCTAGTGGTTCTAGTGGTTCTTCTTCGCAGCATTCACCTGGTCTTCTTCCAGTTGATCATAGTCTTGACCTGAGACCAGCACCGGTACTAGATAATATGAGTTCACAAAACCAGCCAGTTGTCCATGTCCCTGCATTGCCACAAAATGCGCAGTCTTTGAGGTGGAACAGTGGTTCAAGCTCAAGAACCGGCGGCTTATCAAACTCTGTGTTTATGGGGGACAGAGATGCTCCACTACGTGAGGAAGCGAGTTCAAGAAGCATGGCAAGACAGATTTTGGGTCATCCTATTTTTGTACCAGCAACTGAATTGAGGAATTCTGCTAGACTTTCAGCAGGTTCATCCAGTAGAAATTTAACAGGTGGAAATGCAAGTATTCCTGGAAATGTTGCTTCTACATCCCGGACCGGCCCAAGTTCAAGCACTCATCCAGCATCTGCTCCTACATGGGTTCCACACCACAATTCTCATCCGCAATTTCCTCGAAGATTATCTGAATATGTTCGTCGATCATTGTTTTCTGCTGCTGGTAATGAGTCTGGGAACCAGGGCAGCAACTTTTTGCCAATGCGTTCTGGTTCTTCACCATCACAGGAGGCTGTTCATTCATCCGGAGCTGCTAACCTGGGTCATCATCAGCCTCACCCAAGGTCTGCATCGTGGTTGGAGAGACATGGAGATGGACTTGGGCTTCCCTATTCATTGCGCACTTTGGCTGCTGGTGGAGAAGGAAACAGCAGGCTTGTATCTGAGCAGATTTGCAATGTCTTGGGTCTCATGCGAAGGGGCGAGAGCTTGCGGTTCGAGGATGTTATGATTCTTGACCAGTCGATGCTGTTTGGAGTGGCTGATATTCATGACCGGCATAGGGATATGAGACTAGATGTTGACAATATGTCTTACGAGGAGTTATTGGCTCTGGAAGAGCGCATCGGAAATGTGAACACTGGATTGAGTGAAGAAATTATATCGAATCGCTTGAAACATAAGAAGTATATTGCCGAGGCATCTCAAACAGAGACGGAGACGGAGCCTTGTTGTATATGTCAGGAGGAATATAATGAAGGAGAAGATCTTGGAGTGCTTGAATGTGGGCATGATTTCCATAGCGACTGCATCAAACAATGGCTGACGCACAAGAATCTGTGCCCCATTTGTAAAACTACAGCCTTGGCAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008285 GO:0009056 GO:0009057 GO:0009791 GO:0009908 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0019941 GO:0022414 GO:0030163 GO:0031624 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0040008 GO:0042127 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044390 GO:0045926 GO:0046620 GO:0046621 GO:0048367 GO:0048437 GO:0048518 GO:0048519 GO:0048523 GO:0048608 GO:0048638 GO:0048640 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051094 GO:0051239 GO:0051240 GO:0051241 GO:0051603 GO:0051865 GO:0061458 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0090567 GO:0099402 GO:0140096 GO:1900055 GO:1900057 GO:1901564 GO:1901565 GO:1901575 GO:1905623 GO:2000024 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

718

Amino Acids

77.67

Weight (kDa)

6.03

Isoelectric Point (pI)

60.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-rbx1	PF12678	667 - 711	4.3e-09	RING-H2 zinc finger domain
zf-RING_2	PF13639	670 - 711	7.2e-13	Ring finger domain
zf-C3HC4_2	PF13923	670 - 710	5.5e-09	Zinc finger, C3HC4 type (RING finger)
zf-RING_11	PF17123	670 - 697	3.2e-07	RING-like zinc finger
zf-C3HC4	PF00097	670 - 710	1.5e-06	Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX	PF13445	670 - 708	2.8e-06	RING-type zinc-finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006157)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G45180 AT1G45180 AT1G45180 AT1G45180 AT5G42940 AT5G42940
fragaria_vesca	FvH4_2g34090 FvH4_2g34090
malus_domestica	MD08G1097400.v1.1 MD15G1079700.v1.1
prunus_persica	Prupe.1G432700_v2.0.a1
pyrus_communis	pycom08g07950 pycom15g07410 pycom15g07420
rosa_chinensis	RchiOBHm_Chr6g0308261
rosa_laevigata	RLG00000010653
rosa_multiflora	Rmu_ssc0000355.1_g000008
rosa_roxburghii	Rroxscaffold_7G00160310
rosa_rugosa	Rorug06G0365500 Rorug06G0365600 Rorug06G0365700 Rorug06G0365800
rosa_samantha	Rh6AG474500 Rh6BG485200 Rh6CG490200 Rh6DG476600
rosa_wichuraiana	Rw6G041390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	806
Acc16I	TGCGCA	2 cut(s)	1122, 1679
Acc36I	ACCTGC	3 cut(s)	440, 806, 1298
AccB7I	CCANNNNNTGG	2 cut(s)	287, 809
AccBSI	CCGCTC	3 cut(s)	274, 343, 532
AccIII	TCCGGA	1 cut(s)	1583
AciI	CCGC	6 cut(s)	274, 343, 532, 1164, 1445, 1771
AclWI	GGATC	1 cut(s)	551
AcsI	RAATTY	3 cut(s)	181, 1288, 1324
AcuI	CTGAAG	1 cut(s)	285
AdeI	CACNNNGTG	2 cut(s)	254, 1211
AfaI	GTAC	4 cut(s)	19, 583, 1059, 1269
AfiI	CCNNNNNNNGG	6 cut(s)	287, 373, 809, 815, 942, 1840
AgeI	ACCGGT	1 cut(s)	1054
AgsI	TTSAA	7 cut(s)	445, 855, 1149, 1227, 1392, 1954, 2060
AhdI	GACNNNNNGTC	1 cut(s)	1867
AjnI	CCWGG	6 cut(s)	616, 808, 1009, 1351, 1518, 1596
AjuI	GAANNNNNNNTTGG	2 cut(s)	397, 429
AloI	GAACNNNNNNTCC	2 cut(s)	1129, 1161
AluBI	AGCT	6 cut(s)	323, 425, 870, 1152, 1589, 1767
AluI	AGCT	6 cut(s)	323, 425, 870, 1152, 1589, 1767
Alw26I	GTCTC	6 cut(s)	1039, 1636, 1751, 1843, 1985, 1991
AlwI	GGATC	1 cut(s)	551
AlwNI	CAGNNNCTG	3 cut(s)	436, 1277, 1409
Aor13HI	TCCGGA	1 cut(s)	1583
AoxI	GGCC	2 cut(s)	737, 1381
ApeKI	GCWGC	9 cut(s)	77, 422, 575, 962, 1000, 1496, 1524, 1589, 1688
ApoI	RAATTY	3 cut(s)	181, 1288, 1324
AsiGI	ACCGGT	1 cut(s)	1054
Asp700I	GAANNNNTTC	1 cut(s)	1473
AspLEI	GCGC	4 cut(s)	348, 1123, 1680, 1902
AspS9I	GGNCC	2 cut(s)	1377, 1382
AsuC2I	CCSGG	1 cut(s)	1375
AsuHPI	GGTGA	8 cut(s)	144, 239, 266, 329, 482, 999, 1548, 1607
AvaII	GGWCC	1 cut(s)	1377
BaeGI	GKGCMC	1 cut(s)	2123
BbsI	GAAGAC	2 cut(s)	678, 1007
BbvI	GCAGC	9 cut(s)	64, 434, 562, 949, 1012, 1483, 1536, 1576, 1675
BccI	CCATC	8 cut(s)	210, 285, 467, 602, 793, 919, 1567, 1646
BceAI	ACGGC	1 cut(s)	624
BcgI	CGANNNNNNTGC	2 cut(s)	1436, 1470
BciT130I	CCWGG	6 cut(s)	618, 810, 1011, 1353, 1520, 1598
BclI	TGATCA	1 cut(s)	1027
BcnI	CCSGG	1 cut(s)	1375
BcoDI	GTCTC	6 cut(s)	1039, 1636, 1751, 1843, 1985, 1991
BfaI	CTAG	9 cut(s)	44, 234, 240, 966, 975, 984, 1061, 1296, 1853
BfmI	CTRYAG	2 cut(s)	120, 2136
BfoI	RGCGCY	1 cut(s)	349
BfuAI	ACCTGC	3 cut(s)	440, 806, 1298
BglII	AGATCT	1 cut(s)	2044
BmcAI	AGTACT	1 cut(s)	583
Bme1390I	CCNGG	7 cut(s)	618, 810, 1011, 1353, 1375, 1520, 1598
Bme18I	GGWCC	1 cut(s)	1377
BmeRI	GACNNNNNGTC	1 cut(s)	1867
BmgT120I	GGNCC	2 cut(s)	1377, 1382
BmiI	GGNNCC	4 cut(s)	28, 1425, 1517, 2004
BmrFI	CCNGG	7 cut(s)	618, 810, 1011, 1353, 1375, 1520, 1598
BpiI	GAAGAC	2 cut(s)	678, 1007
BpmI	CTGGAG	1 cut(s)	831
Bpu10I	CCTNAGC	1 cut(s)	223
BpuEI	CTTGAG	3 cut(s)	922, 934, 1138
BpuMI	CCSGG	1 cut(s)	1375
BsaAI	YACGTR	1 cut(s)	1211
BsaBI	GATNNNNATC	1 cut(s)	295
BsaI	GGTCTC	2 cut(s)	1039, 1751
BsaJI	CCNNGG	6 cut(s)	55, 1519, 1597, 1619, 1974, 2142
BsaWI	WCCGGW	2 cut(s)	1054, 1583
Bsc4I	CCNNNNNNNGG	6 cut(s)	287, 373, 809, 815, 942, 1840
Bse118I	RCCGGY	4 cut(s)	1054, 1160, 1379, 1833
Bse1I	ACTGG	9 cut(s)	378, 463, 550, 589, 1022, 1088, 1317, 1798, 1924
Bse3DI	GCAATG	3 cut(s)	1106, 1673, 1741
Bse8I	GATNNNNATC	1 cut(s)	295
BseAI	TCCGGA	1 cut(s)	1583
BseBI	CCWGG	6 cut(s)	618, 810, 1011, 1353, 1520, 1598
BseDI	CCNNGG	6 cut(s)	55, 1519, 1597, 1619, 1974, 2142
BseJI	GATNNNNATC	1 cut(s)	295
BseLI	CCNNNNNNNGG	6 cut(s)	287, 373, 809, 815, 942, 1840
BseMI	GCAATG	3 cut(s)	1106, 1673, 1741
BseMII	CTCAG	4 cut(s)	320, 885, 1034, 1713
BseNI	ACTGG	9 cut(s)	378, 463, 550, 589, 1022, 1088, 1317, 1798, 1924
BseRI	GAGGAG	2 cut(s)	353, 1892
BseSI	GKGCMC	1 cut(s)	2123
BseXI	GCAGC	9 cut(s)	64, 434, 562, 949, 1012, 1483, 1536, 1576, 1675
BshFI	GGCC	2 cut(s)	739, 1383
BshTI	ACCGGT	1 cut(s)	1054
BsiSI	CCGG	6 cut(s)	1055, 1161, 1375, 1380, 1584, 1834
BslFI	GGGAC	4 cut(s)	480, 684, 1085, 1205
BslI	CCNNNNNNNGG	6 cut(s)	287, 373, 809, 815, 942, 1840
BsmAI	GTCTC	6 cut(s)	1039, 1636, 1751, 1843, 1985, 1991
BsmBI	CGTCTC	2 cut(s)	1985, 1991
BsmFI	GGGAC	4 cut(s)	480, 684, 1085, 1205
BsmI	GAATGC	4 cut(s)	451, 843, 970, 1003
BsnI	GGCC	2 cut(s)	739, 1383
Bso31I	GGTCTC	2 cut(s)	1039, 1751
Bsp1286I	GDGCHC	1 cut(s)	2123
Bsp13I	TCCGGA	1 cut(s)	1583
Bsp143I	GATC	5 cut(s)	85, 556, 1027, 1481, 2044
Bsp19I	CCATGG	1 cut(s)	55
BspACI	CCGC	6 cut(s)	274, 343, 532, 1164, 1445, 1771
BspANI	GGCC	2 cut(s)	739, 1383
BspCNI	CTCAG	4 cut(s)	321, 884, 1035, 1714
BspEI	TCCGGA	1 cut(s)	1583
BspHI	TCATGA	2 cut(s)	193, 1828
BspLI	GGNNCC	4 cut(s)	28, 1425, 1517, 2004
BspMI	ACCTGC	3 cut(s)	440, 806, 1298
BspPI	GGATC	1 cut(s)	551
BspQI	GCTCTTC	1 cut(s)	1890
BspTNI	GGTCTC	2 cut(s)	1039, 1751
BsrBI	CCGCTC	3 cut(s)	274, 343, 532
BsrDI	GCAATG	3 cut(s)	1106, 1673, 1741
BsrFI	RCCGGY	4 cut(s)	1054, 1160, 1379, 1833
BsrI	ACTGG	9 cut(s)	378, 463, 550, 589, 1022, 1088, 1317, 1798, 1924
BssAI	RCCGGY	4 cut(s)	1054, 1160, 1379, 1833
BssECI	CCNNGG	6 cut(s)	55, 1519, 1597, 1619, 1974, 2142
BssMI	GATC	5 cut(s)	85, 556, 1027, 1481, 2044
BssT1I	CCWWGG	3 cut(s)	55, 1619, 2142
Bst2UI	CCWGG	6 cut(s)	618, 810, 1011, 1353, 1520, 1598
Bst4CI	ACNGT	2 cut(s)	684, 1142
Bst6I	CTCTTC	1 cut(s)	1890
BstAPI	GCANNNNNTGC	1 cut(s)	219
BstBAI	YACGTR	1 cut(s)	1211
BstC8I	GCNNGC	3 cut(s)	766, 1712, 1769
BstDEI	CTNAG	7 cut(s)	208, 223, 329, 676, 871, 1043, 1722
BstDSI	CCRYGG	1 cut(s)	55
BstENI	CCTNNNNNAGG	2 cut(s)	813, 940
BstH2I	RGCGCY	1 cut(s)	349
BstHHI	GCGC	4 cut(s)	348, 1123, 1680, 1902
BstKTI	GATC	5 cut(s)	88, 559, 1030, 1484, 2047
BstMAI	GTCTC	6 cut(s)	1039, 1636, 1751, 1843, 1985, 1991
BstMBI	GATC	5 cut(s)	85, 556, 1027, 1481, 2044
BstMWI	GCNNNNNNNGC	3 cut(s)	40, 105, 219
BstNI	CCWGG	6 cut(s)	618, 810, 1011, 1353, 1520, 1598
BstSCI	CCNGG	7 cut(s)	616, 808, 1009, 1351, 1373, 1518, 1596
BstSFI	CTRYAG	2 cut(s)	120, 2136
BstSLI	GKGCMC	1 cut(s)	2123
BstV1I	GCAGC	9 cut(s)	64, 434, 562, 949, 1012, 1483, 1536, 1576, 1675
BstV2I	GAAGAC	2 cut(s)	678, 1007
BstX2I	RGATCY	1 cut(s)	2044
BstYI	RGATCY	1 cut(s)	2044
BsuRI	GGCC	2 cut(s)	739, 1383
BtgI	CCRYGG	1 cut(s)	55
BtsIMutI	CAGTG	7 cut(s)	156, 309, 371, 456, 519, 1147, 1917
BveI	ACCTGC	3 cut(s)	440, 806, 1298
Cac8I	GCNNGC	3 cut(s)	766, 1712, 1769
CaiI	CAGNNNCTG	3 cut(s)	436, 1277, 1409
CciI	TCATGA	2 cut(s)	193, 1828
CfoI	GCGC	4 cut(s)	348, 1123, 1680, 1902
Cfr10I	RCCGGY	4 cut(s)	1054, 1160, 1379, 1833
Cfr13I	GGNCC	2 cut(s)	1377, 1382
CpoI	CGGWCCG	1 cut(s)	1377
CseI	GACGC	1 cut(s)	2113
CsiI	ACCWGGT	2 cut(s)	616, 1009
Csp6I	GTAC	4 cut(s)	18, 582, 1058, 1268
CspAI	ACCGGT	1 cut(s)	1054
CspI	CGGWCCG	1 cut(s)	1377
CviQI	GTAC	4 cut(s)	18, 582, 1058, 1268
DdeI	CTNAG	7 cut(s)	208, 223, 329, 676, 871, 1043, 1722
DpnI	GATC	5 cut(s)	87, 558, 1029, 1483, 2046
DpnII	GATC	5 cut(s)	85, 556, 1027, 1481, 2044
DraIII	CACNNNGTG	2 cut(s)	254, 1211
DriI	GACNNNNNGTC	1 cut(s)	1867
Eam1104I	CTCTTC	1 cut(s)	1890
Eam1105I	GACNNNNNGTC	1 cut(s)	1867
EarI	CTCTTC	1 cut(s)	1890
Eco130I	CCWWGG	3 cut(s)	55, 1619, 2142
Eco147I	AGGCCT	1 cut(s)	739
Eco31I	GGTCTC	2 cut(s)	1039, 1751
Eco47I	GGWCC	1 cut(s)	1377
Eco57I	CTGAAG	1 cut(s)	285
EcoNI	CCTNNNNNAGG	2 cut(s)	813, 940
EcoRI	GAATTC	2 cut(s)	181, 1288
EcoRII	CCWGG	6 cut(s)	616, 808, 1009, 1351, 1518, 1596
EcoT14I	CCWWGG	3 cut(s)	55, 1619, 2142
ErhI	CCWWGG	3 cut(s)	55, 1619, 2142
Esp3I	CGTCTC	2 cut(s)	1985, 1991
FaqI	GGGAC	4 cut(s)	480, 684, 1085, 1205
FbaI	TGATCA	1 cut(s)	1027
FspBI	CTAG	9 cut(s)	44, 234, 240, 966, 975, 984, 1061, 1296, 1853
FspI	TGCGCA	2 cut(s)	1122, 1679
GlaI	GCGC	4 cut(s)	347, 1122, 1679, 1901
GsuI	CTGGAG	1 cut(s)	831
HaeII	RGCGCY	1 cut(s)	349
HaeIII	GGCC	2 cut(s)	739, 1383
HapII	CCGG	6 cut(s)	1055, 1161, 1375, 1380, 1584, 1834
HgaI	GACGC	1 cut(s)	2113
HhaI	GCGC	4 cut(s)	348, 1123, 1680, 1902
Hin6I	GCGC	4 cut(s)	346, 1121, 1678, 1900
HinP1I	GCGC	4 cut(s)	346, 1121, 1678, 1900
HincII	GTYRAC	1 cut(s)	1861
HindII	GTYRAC	1 cut(s)	1861
HinfI	GANTC	8 cut(s)	115, 133, 535, 851, 1508, 1789, 1945, 2113
HpaII	CCGG	6 cut(s)	1055, 1161, 1375, 1380, 1584, 1834
HphI	GGTGA	8 cut(s)	144, 239, 266, 329, 482, 999, 1548, 1607
Hpy166II	GTNNAC	4 cut(s)	230, 1076, 1861, 1915
Hpy8I	GTNNAC	4 cut(s)	230, 1076, 1861, 1915
Hpy99I	CGWCG	2 cut(s)	70, 1482
HpyAV	CCTTC	4 cut(s)	750, 1694, 1749, 2030
HpyCH4III	ACNGT	2 cut(s)	684, 1142
HpyCH4IV	ACGT	3 cut(s)	65, 199, 1210
HpyF10VI	GCNNNNNNNGC	3 cut(s)	40, 105, 219
HpyF3I	CTNAG	7 cut(s)	208, 223, 329, 676, 871, 1043, 1722
HpySE526I	ACGT	3 cut(s)	65, 199, 1210
HspAI	GCGC	4 cut(s)	346, 1121, 1678, 1900
Kpn2I	TCCGGA	1 cut(s)	1583
Ksp22I	TGATCA	1 cut(s)	1027
Kzo9I	GATC	5 cut(s)	85, 556, 1027, 1481, 2044
LguI	GCTCTTC	1 cut(s)	1890
LmnI	GCTCC	6 cut(s)	340, 812, 1207, 1417, 1586, 2002
Lsp1109I	GCAGC	9 cut(s)	64, 434, 562, 949, 1012, 1483, 1536, 1576, 1675
MabI	ACCWGGT	2 cut(s)	616, 1009
MaeI	CTAG	9 cut(s)	44, 234, 240, 966, 975, 984, 1061, 1296, 1853
MaeII	ACGT	3 cut(s)	65, 199, 1210
MaeIII	GTNAC	2 cut(s)	517, 707
MalI	GATC	5 cut(s)	87, 558, 1029, 1483, 2046
MbiI	CCGCTC	3 cut(s)	274, 343, 532
MboI	GATC	5 cut(s)	85, 556, 1027, 1481, 2044
MflI	RGATCY	1 cut(s)	2044
MhlI	GDGCHC	1 cut(s)	2123
MluCI	AATT	9 cut(s)	181, 412, 550, 1280, 1288, 1324, 1435, 1448, 1935
MlyI	GAGTC	2 cut(s)	529, 1517
MmeI	TCCRAC	3 cut(s)	110, 841, 1617
MroI	TCCGGA	1 cut(s)	1583
MroXI	GAANNNNTTC	1 cut(s)	1473
MseI	TTAA	2 cut(s)	692, 1328
MslI	CAYNNNNRTG	5 cut(s)	161, 468, 759, 975, 1650
MspI	CCGG	6 cut(s)	1055, 1161, 1375, 1380, 1584, 1834
MspR9I	CCNGG	7 cut(s)	618, 810, 1011, 1353, 1375, 1520, 1598
Mva1269I	GAATGC	4 cut(s)	451, 843, 970, 1003
MvaI	CCWGG	6 cut(s)	618, 810, 1011, 1353, 1520, 1598
MwoI	GCNNNNNNNGC	3 cut(s)	40, 105, 219
NciI	CCSGG	1 cut(s)	1375
NcoI	CCATGG	1 cut(s)	55
NdeII	GATC	5 cut(s)	85, 556, 1027, 1481, 2044
NlaIV	GGNNCC	4 cut(s)	28, 1425, 1517, 2004
NmeAIII	GCCGAG	1 cut(s)	1999
NmuCI	GTSAC	1 cut(s)	517
NsbI	TGCGCA	2 cut(s)	1122, 1679
PagI	TCATGA	2 cut(s)	193, 1828
PaqCI	CACCTGC	1 cut(s)	806
PceI	AGGCCT	1 cut(s)	739
PciSI	GCTCTTC	1 cut(s)	1890
PctI	GAATGC	4 cut(s)	451, 843, 970, 1003
PdmI	GAANNNNTTC	1 cut(s)	1473
PfeI	GAWTC	6 cut(s)	115, 133, 851, 1789, 1945, 2113
PflMI	CCANNNNNTGG	2 cut(s)	287, 809
PfoI	TCCNGGA	2 cut(s)	1351, 1373
PinAI	ACCGGT	1 cut(s)	1054
PleI	GAGTC	2 cut(s)	529, 1516
PpsI	GAGTC	2 cut(s)	529, 1516
Ppu21I	YACGTR	1 cut(s)	1211
Psp6I	CCWGG	6 cut(s)	616, 808, 1009, 1351, 1518, 1596
PspGI	CCWGG	6 cut(s)	616, 808, 1009, 1351, 1518, 1596
PspN4I	GGNNCC	4 cut(s)	28, 1425, 1517, 2004
PspPI	GGNCC	2 cut(s)	1377, 1382
PsrI	GAACNNNNNNTAC	2 cut(s)	10, 42
PstNI	CAGNNNCTG	3 cut(s)	436, 1277, 1409
PsuI	RGATCY	1 cut(s)	2044
RsaI	GTAC	4 cut(s)	19, 583, 1059, 1269
RsaNI	GTAC	4 cut(s)	18, 582, 1058, 1268
RseI	CAYNNNNRTG	5 cut(s)	161, 468, 759, 975, 1650
Rsr2I	CGGWCCG	1 cut(s)	1377
RsrII	CGGWCCG	1 cut(s)	1377
SapI	GCTCTTC	1 cut(s)	1890
SaqAI	TTAA	2 cut(s)	692, 1328
Sau3AI	GATC	5 cut(s)	85, 556, 1027, 1481, 2044
Sau96I	GGNCC	2 cut(s)	1377, 1382
ScaI	AGTACT	1 cut(s)	583
SchI	GAGTC	2 cut(s)	529, 1517
ScrFI	CCNGG	7 cut(s)	618, 810, 1011, 1353, 1375, 1520, 1598
SduI	GDGCHC	1 cut(s)	2123
SexAI	ACCWGGT	2 cut(s)	616, 1009
SfcI	CTRYAG	2 cut(s)	120, 2136
SinI	GGWCC	1 cut(s)	1377
SmiMI	CAYNNNNRTG	5 cut(s)	161, 468, 759, 975, 1650
SmlI	CTYRAG	3 cut(s)	937, 949, 1153
SmoI	CTYRAG	3 cut(s)	937, 949, 1153
Sse9I	AATT	9 cut(s)	181, 412, 550, 1280, 1288, 1324, 1435, 1448, 1935
SseBI	AGGCCT	1 cut(s)	739
SsiI	CCGC	6 cut(s)	274, 343, 532, 1164, 1445, 1771
SspMI	CTAG	9 cut(s)	44, 234, 240, 966, 975, 984, 1061, 1296, 1853
StuI	AGGCCT	1 cut(s)	739
StyD4I	CCNGG	7 cut(s)	616, 808, 1009, 1351, 1373, 1518, 1596
StyI	CCWWGG	3 cut(s)	55, 1619, 2142
TaaI	ACNGT	2 cut(s)	684, 1142
TaiI	ACGT	3 cut(s)	68, 202, 1213
TaqI	TCGA	6 cut(s)	68, 1456, 1480, 1776, 1802, 1943
TasI	AATT	9 cut(s)	181, 412, 550, 1280, 1288, 1324, 1435, 1448, 1935
TatI	WGTACW	1 cut(s)	581
TauI	GCSGC	2 cut(s)	346, 1167
TfiI	GAWTC	6 cut(s)	115, 133, 851, 1789, 1945, 2113
Tru1I	TTAA	2 cut(s)	692, 1328
Tru9I	TTAA	2 cut(s)	692, 1328
TscAI	CASTG	7 cut(s)	163, 309, 378, 463, 526, 1147, 1924
TseFI	GTSAC	1 cut(s)	517
TseI	GCWGC	9 cut(s)	77, 422, 575, 962, 1000, 1496, 1524, 1589, 1688
Tsp45I	GTSAC	1 cut(s)	517
TspGWI	ACGGA	3 cut(s)	884, 2009, 2015
TspRI	CASTG	7 cut(s)	163, 309, 378, 463, 526, 1147, 1924
Van91I	CCANNNNNTGG	2 cut(s)	287, 809
VpaK11BI	GGWCC	1 cut(s)	1377
XagI	CCTNNNNNAGG	2 cut(s)	813, 940
XapI	RAATTY	3 cut(s)	181, 1288, 1324
XbaI	TCTAGA	1 cut(s)	239
XcmI	CCANNNNNNNNNTGG	1 cut(s)	288
XmnI	GAANNNNTTC	1 cut(s)	1473
XspI	CTAG	9 cut(s)	44, 234, 240, 966, 975, 984, 1061, 1296, 1853
ZrmI	AGTACT	1 cut(s)	583

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.