Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000355.1

Orthogroup ID

OG0006157

Physical Location & Seq

Genomic Coordinates Reverse (-)

21852 .. 24796

Gene Structure 2945 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000355.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

atgcaagggcagaggggtactatcggttccttgcctgaaatgctagattttgaccatgggaatacgtcgaatgatgctgctttagatcagcagatttgctggaatggcacgcggaatcctgtagaaagtcggattcctgactatatacaatcacctactgatatggatgttggttttgggaattccattggtcgtgaacgtcagaacttaggcagatggtgcttaggtgaacctagttctagaaactcacagggtgaagtaaatcgtgatgagcggaaaccagattttggatggtcatcttcagtggatgcttgtggtgaagctggtctgaggttagaggagcggcgctatgaaccaactaataacctttcactggacaacaatgtgaataccatttttacaccaagttccaattctgatgcagcttcacagcatctgaacttgaatgcaggtttcactggtcatggtggtgatagtagtcaagttatggaatgtcctaacacatacaaatataatgtcaccgaaaatgagcggactcgtcctactggtaattctgatccttttctgcttcctgctgcgagtactggatttttagtgggagaaaatgatggcagacctggttgttcattggagggtcgccgtgtatcttgcaaaagaaagactatggagggacatttaggacagtcttctttaagtggaagttgtagttactttcagcatacagaaagtggtgcaaggccttctgtccctgctcactataatgcaggcataaacatatctactccatcacaagagggaaatccaagacctggagcaggtggtagagaacttacttctgacagcattcctgattcaaatgttggaagaagctcagaaagttctcacagaaacttccgtgtgagaataaatccatccaatcaacaaaacactataccctcaactaggttctcaagtgggagggctgctaggcattctagtggttcttcttcgcagcattcacctggtcttcttccagttgatcatagtctcgacctgagaccagcaccggtactagataatatgagttcacaaaaccagccagttgtccatgtccctgcattgccacaaaatgcgcagtctttgaggtggaacagtggttcaagctcaagaaccggtggcttatcaaactctgtgtttatgggggacagagatgctccactacgtgaggaagcgagttcaagaagcatggcaagacagattttgggtcatcctatttttgtaccagcaactgaattgaggaattctgctagactttcagcaggttcatccagtagaaatttaacaggtggaaatgcaagtattcctggaaatgttgcttctacatcccggaccggcccaagttcaagcactcatccagcgtctgctcctacatgggttcctcaccacaattctcatccgcaatttcctcgaagattatctgaatatgttcgtcgatcattgttttctgctggtggtaatgagtctgggaaccagggcagcaactttttgccaatgcgttctggttcttcatcatcacaggaggctgtgcattcatccggagctgctgctaacctgggtcatcatcagcctcacccaaggtctgcatcgtggttggagagacatggagatggacttgggcttccctattcattgcgcactttggctgctggtggagaaggaaacaacaggcttgtatctgagcagatttgcaatgtcttgggtctcatgcgaaggggcgagagcttgcggttcgaggatgttatgattcttgaccagtcaatgctgtttggagtggctgatattcacgaccggcatagggatatgagactagatgttgacaatatgtcttacgaggagttattggctctggaagagcgcatcggaaatgtgaacactggattgagtgaagaaattatatcgaatcgcttgaaacataagaagtatattgccgaggcatctcaagcagagacagagacggagccttgttgtatatgtcaggaggaatataatgaaagagatgatcttggaatgcttgaatgtgggcatgatttccatagcgactgcatcaaacaatggctgacgcacaagaatctgtgccccatttgtaaaactacagccttggcaacatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008285 GO:0009056 GO:0009057 GO:0009791 GO:0009908 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0019941 GO:0022414 GO:0030163 GO:0031624 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0040008 GO:0042127 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044390 GO:0045926 GO:0046620 GO:0046621 GO:0048367 GO:0048437 GO:0048518 GO:0048519 GO:0048523 GO:0048608 GO:0048638 GO:0048640 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051094 GO:0051239 GO:0051240 GO:0051241 GO:0051603 GO:0051865 GO:0061458 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0090567 GO:0099402 GO:0140096 GO:1900055 GO:1900057 GO:1901564 GO:1901565 GO:1901575 GO:1905623 GO:2000024 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

715

Amino Acids

77.62

Weight (kDa)

6.14

Isoelectric Point (pI)

58.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006157)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G45180 AT1G45180 AT1G45180 AT1G45180 AT5G42940 AT5G42940
fragaria_vesca	FvH4_2g34090 FvH4_2g34090
malus_domestica	MD08G1097400.v1.1 MD15G1079700.v1.1
prunus_persica	Prupe.1G432700_v2.0.a1
pyrus_communis	pycom08g07950 pycom15g07410 pycom15g07420
rosa_chinensis	RchiOBHm_Chr6g0308261
rosa_laevigata	RLG00000010653
rosa_multiflora	Rmu_ssc0000355.1_g000008
rosa_roxburghii	Rroxscaffold_7G00160310
rosa_rugosa	Rorug06G0365500 Rorug06G0365600 Rorug06G0365700 Rorug06G0365800
rosa_samantha	Rh6AG474500 Rh6BG485200 Rh6CG490200 Rh6DG476600
rosa_wichuraiana	Rw6G041390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	806
Acc16I	TGCGCA	2 cut(s)	1113, 1673
Acc36I	ACCTGC	3 cut(s)	440, 806, 1289
AccB7I	CCANNNNNTGG	2 cut(s)	287, 809
AccBSI	CCGCTC	3 cut(s)	274, 343, 532
AccII	CGCG	1 cut(s)	112
AccIII	TCCGGA	1 cut(s)	1574
AciI	CCGC	6 cut(s)	112, 274, 343, 532, 1436, 1765
AclWI	GGATC	1 cut(s)	551
AcsI	RAATTY	3 cut(s)	181, 1279, 1315
AcuI	CTGAAG	1 cut(s)	285
AdeI	CACNNNGTG	2 cut(s)	254, 1202
AfaI	GTAC	4 cut(s)	19, 583, 1050, 1260
AfiI	CCNNNNNNNGG	6 cut(s)	287, 373, 809, 815, 942, 1834
AgeI	ACCGGT	2 cut(s)	1045, 1151
AgsI	TTSAA	7 cut(s)	445, 855, 1140, 1218, 1383, 1948, 2054
AhdI	GACNNNNNGTC	1 cut(s)	1861
AjnI	CCWGG	6 cut(s)	616, 808, 1000, 1342, 1509, 1590
AjuI	GAANNNNNNNTTGG	2 cut(s)	397, 429
AloI	GAACNNNNNNTCC	2 cut(s)	1120, 1152
AluBI	AGCT	6 cut(s)	323, 425, 870, 1143, 1580, 1761
AluI	AGCT	6 cut(s)	323, 425, 870, 1143, 1580, 1761
Alw26I	GTCTC	7 cut(s)	1030, 1031, 1630, 1745, 1837, 1979, 1985
AlwI	GGATC	1 cut(s)	551
AlwNI	CAGNNNCTG	3 cut(s)	436, 1268, 1400
Aor13HI	TCCGGA	1 cut(s)	1574
AoxI	GGCC	2 cut(s)	737, 1372
ApeKI	GCWGC	9 cut(s)	77, 422, 575, 962, 991, 1515, 1580, 1583, 1682
ApoI	RAATTY	3 cut(s)	181, 1279, 1315
ArsI	GACNNNNNNTTYG	2 cut(s)	501, 533
AsiGI	ACCGGT	2 cut(s)	1045, 1151
Asp700I	GAANNNNTTC	1 cut(s)	1464
AspLEI	GCGC	4 cut(s)	348, 1114, 1674, 1896
AspS9I	GGNCC	2 cut(s)	1368, 1373
AsuC2I	CCSGG	1 cut(s)	1366
AsuHPI	GGTGA	9 cut(s)	144, 239, 266, 329, 482, 511, 990, 1412, 1601
AvaII	GGWCC	1 cut(s)	1368
BaeGI	GKGCMC	1 cut(s)	2117
BbsI	GAAGAC	2 cut(s)	678, 998
BbvI	GCAGC	9 cut(s)	64, 434, 562, 949, 1003, 1527, 1567, 1570, 1669
BccI	CCATC	6 cut(s)	210, 285, 602, 793, 919, 1640
BceAI	ACGGC	1 cut(s)	624
BcgI	CGANNNNNNTGC	2 cut(s)	1427, 1461
BciT130I	CCWGG	6 cut(s)	618, 810, 1002, 1344, 1511, 1592
BclI	TGATCA	1 cut(s)	1018
BcnI	CCSGG	1 cut(s)	1366
BcoDI	GTCTC	7 cut(s)	1030, 1031, 1630, 1745, 1837, 1979, 1985
BfaI	CTAG	9 cut(s)	44, 234, 240, 942, 966, 975, 1052, 1287, 1847
BfmI	CTRYAG	2 cut(s)	120, 2130
BfoI	RGCGCY	1 cut(s)	349
BfuAI	ACCTGC	3 cut(s)	440, 806, 1289
BmcAI	AGTACT	1 cut(s)	583
Bme1390I	CCNGG	7 cut(s)	618, 810, 1002, 1344, 1366, 1511, 1592
Bme18I	GGWCC	1 cut(s)	1368
BmeRI	GACNNNNNGTC	1 cut(s)	1861
BmgT120I	GGNCC	2 cut(s)	1368, 1373
BmiI	GGNNCC	4 cut(s)	28, 1416, 1508, 1998
BmrFI	CCNGG	7 cut(s)	618, 810, 1002, 1344, 1366, 1511, 1592
BmsI	GCATC	9 cut(s)	64, 298, 409, 442, 1180, 1631, 1905, 1982, 2091
BpiI	GAAGAC	2 cut(s)	678, 998
BpmI	CTGGAG	1 cut(s)	831
Bpu10I	CCTNAGC	1 cut(s)	223
BpuEI	CTTGAG	3 cut(s)	934, 1129, 1962
BpuMI	CCSGG	1 cut(s)	1366
BsaAI	YACGTR	1 cut(s)	1202
BsaBI	GATNNNNATC	1 cut(s)	295
BsaI	GGTCTC	2 cut(s)	1030, 1745
BsaJI	CCNNGG	6 cut(s)	55, 1510, 1591, 1613, 1968, 2136
BsaWI	WCCGGW	3 cut(s)	1045, 1151, 1574
Bsc4I	CCNNNNNNNGG	6 cut(s)	287, 373, 809, 815, 942, 1834
Bse118I	RCCGGY	4 cut(s)	1045, 1151, 1370, 1827
Bse1I	ACTGG	9 cut(s)	378, 463, 550, 589, 1013, 1079, 1308, 1792, 1918
Bse3DI	GCAATG	3 cut(s)	1097, 1667, 1735
Bse8I	GATNNNNATC	1 cut(s)	295
BseAI	TCCGGA	1 cut(s)	1574
BseBI	CCWGG	6 cut(s)	618, 810, 1002, 1344, 1511, 1592
BseDI	CCNNGG	6 cut(s)	55, 1510, 1591, 1613, 1968, 2136
BseJI	GATNNNNATC	1 cut(s)	295
BseLI	CCNNNNNNNGG	6 cut(s)	287, 373, 809, 815, 942, 1834
BseMI	GCAATG	3 cut(s)	1097, 1667, 1735
BseMII	CTCAG	4 cut(s)	320, 885, 1025, 1707
BseNI	ACTGG	9 cut(s)	378, 463, 550, 589, 1013, 1079, 1308, 1792, 1918
BseRI	GAGGAG	2 cut(s)	353, 1886
BseSI	GKGCMC	1 cut(s)	2117
BseXI	GCAGC	9 cut(s)	64, 434, 562, 949, 1003, 1527, 1567, 1570, 1669
Bsh1236I	CGCG	1 cut(s)	112
Bsh1285I	CGRYCG	1 cut(s)	1828
BshFI	GGCC	2 cut(s)	739, 1374
BshTI	ACCGGT	2 cut(s)	1045, 1151
BsiEI	CGRYCG	1 cut(s)	1828
BsiSI	CCGG	6 cut(s)	1046, 1152, 1366, 1371, 1575, 1828
BslFI	GGGAC	4 cut(s)	684, 731, 1076, 1196
BslI	CCNNNNNNNGG	6 cut(s)	287, 373, 809, 815, 942, 1834
BsmAI	GTCTC	7 cut(s)	1030, 1031, 1630, 1745, 1837, 1979, 1985
BsmBI	CGTCTC	1 cut(s)	1985
BsmFI	GGGAC	4 cut(s)	684, 731, 1076, 1196
BsmI	GAATGC	6 cut(s)	451, 843, 970, 994, 1567, 2052
BsnI	GGCC	2 cut(s)	739, 1374
Bso31I	GGTCTC	2 cut(s)	1030, 1745
Bsp1286I	GDGCHC	1 cut(s)	2117
Bsp13I	TCCGGA	1 cut(s)	1574
Bsp143I	GATC	5 cut(s)	85, 556, 1018, 1472, 2038
Bsp19I	CCATGG	1 cut(s)	55
BspACI	CCGC	6 cut(s)	112, 274, 343, 532, 1436, 1765
BspANI	GGCC	2 cut(s)	739, 1374
BspCNI	CTCAG	4 cut(s)	321, 884, 1026, 1708
BspEI	TCCGGA	1 cut(s)	1574
BspFNI	CGCG	1 cut(s)	112
BspLI	GGNNCC	4 cut(s)	28, 1416, 1508, 1998
BspMI	ACCTGC	3 cut(s)	440, 806, 1289
BspPI	GGATC	1 cut(s)	551
BspQI	GCTCTTC	1 cut(s)	1884
BspTNI	GGTCTC	2 cut(s)	1030, 1745
BsrBI	CCGCTC	3 cut(s)	274, 343, 532
BsrDI	GCAATG	3 cut(s)	1097, 1667, 1735
BsrFI	RCCGGY	4 cut(s)	1045, 1151, 1370, 1827
BsrI	ACTGG	9 cut(s)	378, 463, 550, 589, 1013, 1079, 1308, 1792, 1918
BssAI	RCCGGY	4 cut(s)	1045, 1151, 1370, 1827
BssECI	CCNNGG	6 cut(s)	55, 1510, 1591, 1613, 1968, 2136
BssMI	GATC	5 cut(s)	85, 556, 1018, 1472, 2038
BssT1I	CCWWGG	3 cut(s)	55, 1613, 2136
Bst2UI	CCWGG	6 cut(s)	618, 810, 1002, 1344, 1511, 1592
Bst4CI	ACNGT	2 cut(s)	684, 1133
Bst6I	CTCTTC	1 cut(s)	1884
BstAPI	GCANNNNNTGC	1 cut(s)	219
BstBAI	YACGTR	1 cut(s)	1202
BstC8I	GCNNGC	3 cut(s)	110, 766, 1763
BstDEI	CTNAG	6 cut(s)	208, 223, 329, 871, 1034, 1716
BstDSI	CCRYGG	1 cut(s)	55
BstENI	CCTNNNNNAGG	2 cut(s)	813, 940
BstFNI	CGCG	1 cut(s)	112
BstH2I	RGCGCY	1 cut(s)	349
BstHHI	GCGC	4 cut(s)	348, 1114, 1674, 1896
BstKTI	GATC	5 cut(s)	88, 559, 1021, 1475, 2041
BstMAI	GTCTC	7 cut(s)	1030, 1031, 1630, 1745, 1837, 1979, 1985
BstMBI	GATC	5 cut(s)	85, 556, 1018, 1472, 2038
BstMCI	CGRYCG	1 cut(s)	1828
BstMWI	GCNNNNNNNGC	4 cut(s)	40, 105, 219, 1979
BstNI	CCWGG	6 cut(s)	618, 810, 1002, 1344, 1511, 1592
BstSCI	CCNGG	7 cut(s)	616, 808, 1000, 1342, 1364, 1509, 1590
BstSFI	CTRYAG	2 cut(s)	120, 2130
BstSLI	GKGCMC	1 cut(s)	2117
BstUI	CGCG	1 cut(s)	112
BstV1I	GCAGC	9 cut(s)	64, 434, 562, 949, 1003, 1527, 1567, 1570, 1669
BstV2I	GAAGAC	2 cut(s)	678, 998
BsuRI	GGCC	2 cut(s)	739, 1374
BtgI	CCRYGG	1 cut(s)	55
BtsIMutI	CAGTG	5 cut(s)	309, 371, 456, 1138, 1911
BveI	ACCTGC	3 cut(s)	440, 806, 1289
Cac8I	GCNNGC	3 cut(s)	110, 766, 1763
CaiI	CAGNNNCTG	3 cut(s)	436, 1268, 1400
CfoI	GCGC	4 cut(s)	348, 1114, 1674, 1896
Cfr10I	RCCGGY	4 cut(s)	1045, 1151, 1370, 1827
Cfr13I	GGNCC	2 cut(s)	1368, 1373
CpoI	CGGWCCG	1 cut(s)	1368
CseI	GACGC	2 cut(s)	1386, 2107
CsiI	ACCWGGT	2 cut(s)	616, 1000
Csp6I	GTAC	4 cut(s)	18, 582, 1049, 1259
CspAI	ACCGGT	2 cut(s)	1045, 1151
CspI	CGGWCCG	1 cut(s)	1368
CviAII	CATG	9 cut(s)	56, 464, 1088, 1225, 1410, 1640, 1744, 2063, 2145
CviQI	GTAC	4 cut(s)	18, 582, 1049, 1259
DdeI	CTNAG	6 cut(s)	208, 223, 329, 871, 1034, 1716
DpnI	GATC	5 cut(s)	87, 558, 1020, 1474, 2040
DpnII	GATC	5 cut(s)	85, 556, 1018, 1472, 2038
DraIII	CACNNNGTG	2 cut(s)	254, 1202
DriI	GACNNNNNGTC	1 cut(s)	1861
Eam1104I	CTCTTC	1 cut(s)	1884
Eam1105I	GACNNNNNGTC	1 cut(s)	1861
EarI	CTCTTC	1 cut(s)	1884
Eco130I	CCWWGG	3 cut(s)	55, 1613, 2136
Eco147I	AGGCCT	1 cut(s)	739
Eco31I	GGTCTC	2 cut(s)	1030, 1745
Eco47I	GGWCC	1 cut(s)	1368
Eco57I	CTGAAG	1 cut(s)	285
EcoNI	CCTNNNNNAGG	2 cut(s)	813, 940
EcoRI	GAATTC	2 cut(s)	181, 1279
EcoRII	CCWGG	6 cut(s)	616, 808, 1000, 1342, 1509, 1590
EcoT14I	CCWWGG	3 cut(s)	55, 1613, 2136
ErhI	CCWWGG	3 cut(s)	55, 1613, 2136
Esp3I	CGTCTC	1 cut(s)	1985
FaeI	CATG	9 cut(s)	59, 467, 1091, 1228, 1413, 1643, 1747, 2066, 2148
FaqI	GGGAC	4 cut(s)	684, 731, 1076, 1196
FatI	CATG	9 cut(s)	55, 463, 1087, 1224, 1409, 1639, 1743, 2062, 2144
FbaI	TGATCA	1 cut(s)	1018
FspBI	CTAG	9 cut(s)	44, 234, 240, 942, 966, 975, 1052, 1287, 1847
FspI	TGCGCA	2 cut(s)	1113, 1673
GlaI	GCGC	4 cut(s)	347, 1113, 1673, 1895
GsuI	CTGGAG	1 cut(s)	831
HaeII	RGCGCY	1 cut(s)	349
HaeIII	GGCC	2 cut(s)	739, 1374
HapII	CCGG	6 cut(s)	1046, 1152, 1366, 1371, 1575, 1828
HgaI	GACGC	2 cut(s)	1386, 2107
HhaI	GCGC	4 cut(s)	348, 1114, 1674, 1896
Hin1II	CATG	9 cut(s)	59, 467, 1091, 1228, 1413, 1643, 1747, 2066, 2148
Hin6I	GCGC	4 cut(s)	346, 1112, 1672, 1894
HinP1I	GCGC	4 cut(s)	346, 1112, 1672, 1894
HincII	GTYRAC	1 cut(s)	1855
HindII	GTYRAC	1 cut(s)	1855
HinfI	GANTC	8 cut(s)	115, 133, 535, 851, 1499, 1783, 1939, 2107
HpaII	CCGG	6 cut(s)	1046, 1152, 1366, 1371, 1575, 1828
HphI	GGTGA	9 cut(s)	144, 239, 266, 329, 482, 511, 990, 1412, 1601
Hpy166II	GTNNAC	5 cut(s)	197, 230, 1067, 1855, 1909
Hpy8I	GTNNAC	5 cut(s)	197, 230, 1067, 1855, 1909
Hpy99I	CGWCG	2 cut(s)	70, 1473
HpyAV	CCTTC	3 cut(s)	750, 1688, 1743
HpyCH4III	ACNGT	2 cut(s)	684, 1133
HpyCH4IV	ACGT	3 cut(s)	65, 199, 1201
HpyF10VI	GCNNNNNNNGC	4 cut(s)	40, 105, 219, 1979
HpyF3I	CTNAG	6 cut(s)	208, 223, 329, 871, 1034, 1716
HpySE526I	ACGT	3 cut(s)	65, 199, 1201
Hsp92II	CATG	9 cut(s)	59, 467, 1091, 1228, 1413, 1643, 1747, 2066, 2148
HspAI	GCGC	4 cut(s)	346, 1112, 1672, 1894
Kpn2I	TCCGGA	1 cut(s)	1574
Ksp22I	TGATCA	1 cut(s)	1018
Kzo9I	GATC	5 cut(s)	85, 556, 1018, 1472, 2038
LguI	GCTCTTC	1 cut(s)	1884
LmnI	GCTCC	6 cut(s)	340, 812, 1198, 1408, 1577, 1996
Lsp1109I	GCAGC	9 cut(s)	64, 434, 562, 949, 1003, 1527, 1567, 1570, 1669
LweI	GCATC	9 cut(s)	64, 298, 409, 442, 1180, 1631, 1905, 1982, 2091
MabI	ACCWGGT	2 cut(s)	616, 1000
MaeI	CTAG	9 cut(s)	44, 234, 240, 942, 966, 975, 1052, 1287, 1847
MaeII	ACGT	3 cut(s)	65, 199, 1201
MaeIII	GTNAC	2 cut(s)	517, 707
MalI	GATC	5 cut(s)	87, 558, 1020, 1474, 2040
MbiI	CCGCTC	3 cut(s)	274, 343, 532
MboI	GATC	5 cut(s)	85, 556, 1018, 1472, 2038
MhlI	GDGCHC	1 cut(s)	2117
MluCI	AATT	9 cut(s)	181, 412, 550, 1271, 1279, 1315, 1426, 1439, 1929
MlyI	GAGTC	2 cut(s)	529, 1508
MmeI	TCCRAC	3 cut(s)	110, 841, 1611
MroI	TCCGGA	1 cut(s)	1574
MroXI	GAANNNNTTC	1 cut(s)	1464
MseI	TTAA	2 cut(s)	692, 1319
MslI	CAYNNNNRTG	4 cut(s)	468, 759, 975, 1644
MspI	CCGG	6 cut(s)	1046, 1152, 1366, 1371, 1575, 1828
MspR9I	CCNGG	7 cut(s)	618, 810, 1002, 1344, 1366, 1511, 1592
Mva1269I	GAATGC	6 cut(s)	451, 843, 970, 994, 1567, 2052
MvaI	CCWGG	6 cut(s)	618, 810, 1002, 1344, 1511, 1592
MvnI	CGCG	1 cut(s)	112
MwoI	GCNNNNNNNGC	4 cut(s)	40, 105, 219, 1979
NciI	CCSGG	1 cut(s)	1366
NcoI	CCATGG	1 cut(s)	55
NdeII	GATC	5 cut(s)	85, 556, 1018, 1472, 2038
NlaIII	CATG	9 cut(s)	59, 467, 1091, 1228, 1413, 1643, 1747, 2066, 2148
NlaIV	GGNNCC	4 cut(s)	28, 1416, 1508, 1998
NmeAIII	GCCGAG	1 cut(s)	1993
NmuCI	GTSAC	1 cut(s)	517
NsbI	TGCGCA	2 cut(s)	1113, 1673
PaqCI	CACCTGC	1 cut(s)	806
PceI	AGGCCT	1 cut(s)	739
PciSI	GCTCTTC	1 cut(s)	1884
PctI	GAATGC	6 cut(s)	451, 843, 970, 994, 1567, 2052
PdmI	GAANNNNTTC	1 cut(s)	1464
PfeI	GAWTC	6 cut(s)	115, 133, 851, 1783, 1939, 2107
PflMI	CCANNNNNTGG	2 cut(s)	287, 809
PfoI	TCCNGGA	2 cut(s)	1342, 1364
PinAI	ACCGGT	2 cut(s)	1045, 1151
PleI	GAGTC	2 cut(s)	529, 1507
PpsI	GAGTC	2 cut(s)	529, 1507
Ppu21I	YACGTR	1 cut(s)	1202
Psp6I	CCWGG	6 cut(s)	616, 808, 1000, 1342, 1509, 1590
PspGI	CCWGG	6 cut(s)	616, 808, 1000, 1342, 1509, 1590
PspN4I	GGNNCC	4 cut(s)	28, 1416, 1508, 1998
PspPI	GGNCC	2 cut(s)	1368, 1373
PsrI	GAACNNNNNNTAC	2 cut(s)	10, 42
PstNI	CAGNNNCTG	3 cut(s)	436, 1268, 1400
RsaI	GTAC	4 cut(s)	19, 583, 1050, 1260
RsaNI	GTAC	4 cut(s)	18, 582, 1049, 1259
RseI	CAYNNNNRTG	4 cut(s)	468, 759, 975, 1644
Rsr2I	CGGWCCG	1 cut(s)	1368
RsrII	CGGWCCG	1 cut(s)	1368
SapI	GCTCTTC	1 cut(s)	1884
SaqAI	TTAA	2 cut(s)	692, 1319
Sau3AI	GATC	5 cut(s)	85, 556, 1018, 1472, 2038
Sau96I	GGNCC	2 cut(s)	1368, 1373
ScaI	AGTACT	1 cut(s)	583
SchI	GAGTC	2 cut(s)	529, 1508
ScrFI	CCNGG	7 cut(s)	618, 810, 1002, 1344, 1366, 1511, 1592
SduI	GDGCHC	1 cut(s)	2117
SexAI	ACCWGGT	2 cut(s)	616, 1000
SfaNI	GCATC	9 cut(s)	64, 298, 409, 442, 1180, 1631, 1905, 1982, 2091
SfcI	CTRYAG	2 cut(s)	120, 2130
SinI	GGWCC	1 cut(s)	1368
SmiMI	CAYNNNNRTG	4 cut(s)	468, 759, 975, 1644
SmlI	CTYRAG	3 cut(s)	949, 1144, 1977
SmoI	CTYRAG	3 cut(s)	949, 1144, 1977
Sse9I	AATT	9 cut(s)	181, 412, 550, 1271, 1279, 1315, 1426, 1439, 1929
SseBI	AGGCCT	1 cut(s)	739
SsiI	CCGC	6 cut(s)	112, 274, 343, 532, 1436, 1765
SspMI	CTAG	9 cut(s)	44, 234, 240, 942, 966, 975, 1052, 1287, 1847
StuI	AGGCCT	1 cut(s)	739
StyD4I	CCNGG	7 cut(s)	616, 808, 1000, 1342, 1364, 1509, 1590
StyI	CCWWGG	3 cut(s)	55, 1613, 2136
TaaI	ACNGT	2 cut(s)	684, 1133
TaiI	ACGT	3 cut(s)	68, 202, 1204
TaqI	TCGA	6 cut(s)	68, 1029, 1447, 1471, 1770, 1937
TasI	AATT	9 cut(s)	181, 412, 550, 1271, 1279, 1315, 1426, 1439, 1929
TatI	WGTACW	1 cut(s)	581
TauI	GCSGC	1 cut(s)	346
TfiI	GAWTC	6 cut(s)	115, 133, 851, 1783, 1939, 2107
Tru1I	TTAA	2 cut(s)	692, 1319
Tru9I	TTAA	2 cut(s)	692, 1319
TscAI	CASTG	5 cut(s)	309, 378, 463, 1138, 1918
TseFI	GTSAC	1 cut(s)	517
TseI	GCWGC	9 cut(s)	77, 422, 575, 962, 991, 1515, 1580, 1583, 1682
Tsp45I	GTSAC	1 cut(s)	517
TspDTI	ATGAA	7 cut(s)	366, 615, 1293, 1536, 1560, 1656, 2043
TspGWI	ACGGA	2 cut(s)	884, 2009
TspRI	CASTG	5 cut(s)	309, 378, 463, 1138, 1918
Van91I	CCANNNNNTGG	2 cut(s)	287, 809
VpaK11BI	GGWCC	1 cut(s)	1368
XagI	CCTNNNNNAGG	2 cut(s)	813, 940
XapI	RAATTY	3 cut(s)	181, 1279, 1315
XbaI	TCTAGA	1 cut(s)	239
XcmI	CCANNNNNNNNNTGG	1 cut(s)	288
XmnI	GAANNNNTTC	1 cut(s)	1464
XspI	CTAG	9 cut(s)	44, 234, 240, 942, 966, 975, 1052, 1287, 1847
ZrmI	AGTACT	1 cut(s)	583

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.