Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0006157

Physical Location & Seq

Genomic Coordinates Reverse (-)

65603292 .. 65608300

Gene Structure 5009 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG474500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGCAAGGGCAGAGGGGTACTATCGGTTCCTTGCCTGAAATGCTAGATTTTGACCATGGGAATACGTCGAATGATGCTGCTTTAGATCAGCAGATTTGCTGGAATGGCACGCGGAATCCTGTAGAAAGTCGGATTCCTGACTATATACAATCACCTACTGATATGGATGTTGGTTTTGGGAATTCCATTGGTCGTGAACGTCAGAACTTAGGCAGATGGTGCTTGGGTGAACCTAGTTCTAGAAACTCACAGGGTGAAGTAAATCGTGATGAGCGGAAACCAGATTTTGGATGGTCATCTTCAGTGGATGCTTGTGGTGAAGCTGGTCTGAGGTTAGAGGAGCGGCGCTATGAACCAACTAATAACCTTTCACTGGACAACAATGTGAATACTATTTTTACACCAAGTTCCAATTCTGATGCAGCTTCACAGCATCTGAACTTGAATGCAGGTTTCACTGGTCATGGTGGTGATAGTAGTCAAGTTATGGAATGTCCTAACACATACAAGTATAATGTCACCGAAAATGAGCGGACTCGTCCTACTGGTAATTCTGATCCTTTTCTGCTTCCCGCTGCAAGTACTGGATTTTTAGTGGGAGAAAATGATGGCAGACCTGGTTGTTCATTGGAGGGTCGCCGTGTATCTTGCAAAAGAAAGACTATGGAGGGACATTTAGGACAGTCTTCTTTAAGTGGAAGTTGTAGTTACTTTCAGCATACAGAAAGTGGTGCAAGGACTTCTGTCCCTGCTCACTATAATGCAGGCATAAACATATCCACTCCATCACAAGAGGGAAATCCAAGACCTGGAGCAGGTGGTAGAGAACTTACTTCTGACAGCATTCCTGATTCAAATGTTGGAAGAAGCTCAGAAAGTTCTCACAGAAACTTCCGTGTGAGAATAAATCCATCCAATCAACAAAACACTATACCCTCAACTAGGTTCTCAAGTGGGAGGGCTGCTAGGCATTCTAGTGGTTCTTCTTCGCAGCATTCACCTGGTCTTCTTCCAGTTGATCATAGTCTCGACCTGAGACCAGCACCGGTACTAGATAATATGAGTTCACAAAACCAGCCAGTTGTCCATGTCCCTGCATTGCCACAAAATGCGCAGTCTTTGAGGTGGAACAGTGGTTCAAGCTCAAGAACCGGTGGCTTATCAAACTCTGTGTTTATGGGGGACAGAGATGCTCCACTACGTGAGGAAGCGAGTTCAAGAAGCATGGCAAGACAGATTTTGGGTCATCCTATTTTTGTACCAGCAACTGAATTGAGGAATTCTGCTAGACTTTCAGCAGGTTCATCCAGTAGAAATTTAACAGGTGGAAATGCAAGTATTCCTGGAAATGTTGCTTCTACATCCCGGACCGGCCCAAGTTCAAGCACTCATCCAGCGTCTGCTCCTACATGGGTTCCTCACCACAATTCTCATCCGCAATTTCCTCGAAGATTATCTGAATATGTTCGTCGATCATTGTTTTCTGCTGGTGGTAATGAGTCTGGGAACCAGGGCAGCAACTTTTTGCCAATGCGTTCTGGTTCTTCATCATCACAGGAGGCTGTGCATTCATCCGGAGCTGCTAACCTGGGTCATCATCAGCCTCACCCAAGGTCTGCATCGTGGTTGGAGAGACATGGAGATGGACTTGGGCTTCCCTATTCATTGCGCACTTTGGCTGCTGGTGGAGAAGGAAACAACAGGCTTGTATCTGAGCAGATTTGCAATGTCTTGGGTCTCATGCGAAGGGGCGAGAGCTTGCGGTTCGAGGTTAGAATTTTGTTTTTGTTATGTATACCAGAGCACATCAATGTAATCCCACTCTATCTAACTTTGCAAATGGCCAGAAATCTTTCTTTAAAGACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008285 GO:0009056 GO:0009057 GO:0009791 GO:0009908 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0019941 GO:0022414 GO:0030163 GO:0031624 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0040008 GO:0042127 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044390 GO:0045926 GO:0046620 GO:0046621 GO:0048367 GO:0048437 GO:0048518 GO:0048519 GO:0048523 GO:0048608 GO:0048638 GO:0048640 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051094 GO:0051239 GO:0051240 GO:0051241 GO:0051603 GO:0051865 GO:0061458 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0090567 GO:0099402 GO:0140096 GO:1900055 GO:1900057 GO:1901564 GO:1901565 GO:1901575 GO:1905623 GO:2000024 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

622

Amino Acids

67.03

Weight (kDa)

8.39

Isoelectric Point (pI)

59.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006157)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G45180 AT1G45180 AT1G45180 AT1G45180 AT5G42940 AT5G42940
fragaria_vesca	FvH4_2g34090 FvH4_2g34090
malus_domestica	MD08G1097400.v1.1 MD15G1079700.v1.1
prunus_persica	Prupe.1G432700_v2.0.a1
pyrus_communis	pycom08g07950 pycom15g07410 pycom15g07420
rosa_chinensis	RchiOBHm_Chr6g0308261
rosa_laevigata	RLG00000010653
rosa_multiflora	Rmu_ssc0000355.1_g000008
rosa_roxburghii	Rroxscaffold_7G00160310
rosa_rugosa	Rorug06G0365500 Rorug06G0365600 Rorug06G0365700 Rorug06G0365800
rosa_samantha	Rh6AG474500 Rh6BG485200 Rh6CG490200 Rh6DG476600
rosa_wichuraiana	Rw6G041390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	806
Acc16I	TGCGCA	2 cut(s)	1113, 1670
Acc36I	ACCTGC	3 cut(s)	440, 806, 1289
AccB7I	CCANNNNNTGG	2 cut(s)	287, 809
AccBSI	CCGCTC	3 cut(s)	274, 343, 532
AccI	GTMKAC	1 cut(s)	1795
AccII	CGCG	1 cut(s)	112
AccIII	TCCGGA	1 cut(s)	1574
AciI	CCGC	7 cut(s)	112, 274, 343, 532, 573, 1436, 1762
AclWI	GGATC	1 cut(s)	551
AcoI	YGGCCR	1 cut(s)	1842
AcsI	RAATTY	4 cut(s)	181, 1279, 1315, 1776
AcuI	CTGAAG	1 cut(s)	285
AdeI	CACNNNGTG	2 cut(s)	254, 1202
AfaI	GTAC	4 cut(s)	19, 583, 1050, 1260
AfiI	CCNNNNNNNGG	5 cut(s)	287, 373, 809, 815, 942
AgeI	ACCGGT	2 cut(s)	1045, 1151
AgsI	TTSAA	5 cut(s)	445, 855, 1140, 1218, 1383
AjnI	CCWGG	6 cut(s)	616, 808, 1000, 1342, 1509, 1587
AjuI	GAANNNNNNNTTGG	2 cut(s)	397, 429
AloI	GAACNNNNNNTCC	2 cut(s)	1120, 1152
AluBI	AGCT	6 cut(s)	323, 425, 870, 1143, 1580, 1758
AluI	AGCT	6 cut(s)	323, 425, 870, 1143, 1580, 1758
Alw21I	GWGCWC	1 cut(s)	1806
Alw26I	GTCTC	4 cut(s)	1030, 1031, 1627, 1742
AlwI	GGATC	1 cut(s)	551
AlwNI	CAGNNNCTG	3 cut(s)	436, 1268, 1400
Aor13HI	TCCGGA	1 cut(s)	1574
AoxI	GGCC	2 cut(s)	1372, 1842
ApeKI	GCWGC	8 cut(s)	77, 422, 575, 962, 991, 1515, 1580, 1679
ApoI	RAATTY	4 cut(s)	181, 1279, 1315, 1776
AsiGI	ACCGGT	2 cut(s)	1045, 1151
Asp700I	GAANNNNTTC	2 cut(s)	1464, 1852
AspLEI	GCGC	3 cut(s)	348, 1114, 1671
AspS9I	GGNCC	2 cut(s)	1368, 1373
AsuC2I	CCSGG	1 cut(s)	1366
AsuHPI	GGTGA	9 cut(s)	144, 239, 266, 329, 482, 511, 990, 1412, 1598
AvaII	GGWCC	1 cut(s)	1368
BalI	TGGCCA	1 cut(s)	1844
BbsI	GAAGAC	2 cut(s)	678, 998
Bbv12I	GWGCWC	1 cut(s)	1806
BbvI	GCAGC	8 cut(s)	64, 434, 562, 949, 1003, 1527, 1567, 1666
BccI	CCATC	6 cut(s)	210, 285, 602, 793, 919, 1637
BceAI	ACGGC	1 cut(s)	624
BcgI	CGANNNNNNTGC	2 cut(s)	1427, 1461
BciT130I	CCWGG	6 cut(s)	618, 810, 1002, 1344, 1511, 1589
BclI	TGATCA	1 cut(s)	1018
BcnI	CCSGG	1 cut(s)	1366
BcoDI	GTCTC	4 cut(s)	1030, 1031, 1627, 1742
BfaI	CTAG	8 cut(s)	44, 234, 240, 942, 966, 975, 1052, 1287
BfmI	CTRYAG	1 cut(s)	120
BfoI	RGCGCY	1 cut(s)	349
BfuAI	ACCTGC	3 cut(s)	440, 806, 1289
BisI	GCNGC	9 cut(s)	78, 344, 423, 576, 963, 992, 1516, 1581, 1680
BlsI	GCNGC	9 cut(s)	79, 345, 424, 577, 964, 993, 1517, 1582, 1681
BmcAI	AGTACT	1 cut(s)	583
Bme1390I	CCNGG	7 cut(s)	618, 810, 1002, 1344, 1366, 1511, 1589
Bme18I	GGWCC	1 cut(s)	1368
BmgT120I	GGNCC	2 cut(s)	1368, 1373
BmiI	GGNNCC	3 cut(s)	28, 1416, 1508
BmrFI	CCNGG	7 cut(s)	618, 810, 1002, 1344, 1366, 1511, 1589
BmsI	GCATC	6 cut(s)	64, 298, 409, 442, 1180, 1628
BoxI	GACNNNNGTC	1 cut(s)	743
BpiI	GAAGAC	2 cut(s)	678, 998
BpmI	CTGGAG	1 cut(s)	831
BpuEI	CTTGAG	2 cut(s)	934, 1129
BpuMI	CCSGG	1 cut(s)	1366
BsaAI	YACGTR	1 cut(s)	1202
BsaBI	GATNNNNATC	1 cut(s)	295
BsaI	GGTCTC	2 cut(s)	1030, 1742
BsaJI	CCNNGG	4 cut(s)	55, 1510, 1588, 1610
BsaWI	WCCGGW	3 cut(s)	1045, 1151, 1574
Bsc4I	CCNNNNNNNGG	5 cut(s)	287, 373, 809, 815, 942
Bse118I	RCCGGY	3 cut(s)	1045, 1151, 1370
Bse1I	ACTGG	7 cut(s)	378, 463, 550, 589, 1013, 1079, 1308
Bse3DI	GCAATG	3 cut(s)	1097, 1664, 1732
Bse8I	GATNNNNATC	1 cut(s)	295
BseAI	TCCGGA	1 cut(s)	1574
BseBI	CCWGG	6 cut(s)	618, 810, 1002, 1344, 1511, 1589
BseDI	CCNNGG	4 cut(s)	55, 1510, 1588, 1610
BseJI	GATNNNNATC	1 cut(s)	295
BseLI	CCNNNNNNNGG	5 cut(s)	287, 373, 809, 815, 942
BseMI	GCAATG	3 cut(s)	1097, 1664, 1732
BseMII	CTCAG	4 cut(s)	320, 885, 1025, 1704
BseNI	ACTGG	7 cut(s)	378, 463, 550, 589, 1013, 1079, 1308
BseRI	GAGGAG	1 cut(s)	353
BseXI	GCAGC	8 cut(s)	64, 434, 562, 949, 1003, 1527, 1567, 1666
Bsh1236I	CGCG	1 cut(s)	112
BshFI	GGCC	2 cut(s)	1374, 1844
BshTI	ACCGGT	2 cut(s)	1045, 1151
BsiHKAI	GWGCWC	1 cut(s)	1806
BsiSI	CCGG	5 cut(s)	1046, 1152, 1366, 1371, 1575
BslFI	GGGAC	4 cut(s)	684, 731, 1076, 1196
BslI	CCNNNNNNNGG	5 cut(s)	287, 373, 809, 815, 942
BsmAI	GTCTC	4 cut(s)	1030, 1031, 1627, 1742
BsmFI	GGGAC	4 cut(s)	684, 731, 1076, 1196
BsmI	GAATGC	5 cut(s)	451, 843, 970, 994, 1567
BsnI	GGCC	2 cut(s)	1374, 1844
Bso31I	GGTCTC	2 cut(s)	1030, 1742
Bsp1286I	GDGCHC	1 cut(s)	1806
Bsp13I	TCCGGA	1 cut(s)	1574
Bsp143I	GATC	4 cut(s)	85, 556, 1018, 1472
Bsp19I	CCATGG	1 cut(s)	55
BspACI	CCGC	7 cut(s)	112, 274, 343, 532, 573, 1436, 1762
BspANI	GGCC	2 cut(s)	1374, 1844
BspCNI	CTCAG	4 cut(s)	321, 884, 1026, 1705
BspEI	TCCGGA	1 cut(s)	1574
BspFNI	CGCG	1 cut(s)	112
BspLI	GGNNCC	3 cut(s)	28, 1416, 1508
BspMI	ACCTGC	3 cut(s)	440, 806, 1289
BspPI	GGATC	1 cut(s)	551
BspTNI	GGTCTC	2 cut(s)	1030, 1742
BsrBI	CCGCTC	3 cut(s)	274, 343, 532
BsrDI	GCAATG	3 cut(s)	1097, 1664, 1732
BsrFI	RCCGGY	3 cut(s)	1045, 1151, 1370
BsrI	ACTGG	7 cut(s)	378, 463, 550, 589, 1013, 1079, 1308
BssAI	RCCGGY	3 cut(s)	1045, 1151, 1370
BssECI	CCNNGG	4 cut(s)	55, 1510, 1588, 1610
BssMI	GATC	4 cut(s)	85, 556, 1018, 1472
BssNAI	GTATAC	1 cut(s)	1796
BssT1I	CCWWGG	2 cut(s)	55, 1610
Bst1107I	GTATAC	1 cut(s)	1796
Bst2UI	CCWGG	6 cut(s)	618, 810, 1002, 1344, 1511, 1589
Bst4CI	ACNGT	2 cut(s)	684, 1133
BstAPI	GCANNNNNTGC	1 cut(s)	219
BstBAI	YACGTR	1 cut(s)	1202
BstC8I	GCNNGC	3 cut(s)	110, 766, 1760
BstDEI	CTNAG	5 cut(s)	208, 329, 871, 1034, 1713
BstDSI	CCRYGG	1 cut(s)	55
BstENI	CCTNNNNNAGG	2 cut(s)	813, 940
BstFNI	CGCG	1 cut(s)	112
BstH2I	RGCGCY	1 cut(s)	349
BstHHI	GCGC	3 cut(s)	348, 1114, 1671
BstKTI	GATC	4 cut(s)	88, 559, 1021, 1475
BstMAI	GTCTC	4 cut(s)	1030, 1031, 1627, 1742
BstMBI	GATC	4 cut(s)	85, 556, 1018, 1472
BstMWI	GCNNNNNNNGC	3 cut(s)	40, 105, 219
BstNI	CCWGG	6 cut(s)	618, 810, 1002, 1344, 1511, 1589
BstPAI	GACNNNNGTC	1 cut(s)	743
BstSCI	CCNGG	7 cut(s)	616, 808, 1000, 1342, 1364, 1509, 1587
BstSFI	CTRYAG	1 cut(s)	120
BstUI	CGCG	1 cut(s)	112
BstV1I	GCAGC	8 cut(s)	64, 434, 562, 949, 1003, 1527, 1567, 1666
BstV2I	GAAGAC	2 cut(s)	678, 998
BstZ17I	GTATAC	1 cut(s)	1796
BsuRI	GGCC	2 cut(s)	1374, 1844
BtgI	CCRYGG	1 cut(s)	55
BtsIMutI	CAGTG	4 cut(s)	309, 371, 456, 1138
BveI	ACCTGC	3 cut(s)	440, 806, 1289
Cac8I	GCNNGC	3 cut(s)	110, 766, 1760
CaiI	CAGNNNCTG	3 cut(s)	436, 1268, 1400
CfoI	GCGC	3 cut(s)	348, 1114, 1671
Cfr10I	RCCGGY	3 cut(s)	1045, 1151, 1370
Cfr13I	GGNCC	2 cut(s)	1368, 1373
CpoI	CGGWCCG	1 cut(s)	1368
CseI	GACGC	1 cut(s)	1386
CsiI	ACCWGGT	2 cut(s)	616, 1000
Csp6I	GTAC	4 cut(s)	18, 582, 1049, 1259
CspAI	ACCGGT	2 cut(s)	1045, 1151
CspI	CGGWCCG	1 cut(s)	1368
CviAII	CATG	7 cut(s)	56, 464, 1088, 1225, 1410, 1637, 1741
CviQI	GTAC	4 cut(s)	18, 582, 1049, 1259
DdeI	CTNAG	5 cut(s)	208, 329, 871, 1034, 1713
DpnI	GATC	4 cut(s)	87, 558, 1020, 1474
DpnII	GATC	4 cut(s)	85, 556, 1018, 1472
DraI	TTTAAA	1 cut(s)	1860
DraIII	CACNNNGTG	2 cut(s)	254, 1202
EaeI	YGGCCR	1 cut(s)	1842
Eco130I	CCWWGG	2 cut(s)	55, 1610
Eco31I	GGTCTC	2 cut(s)	1030, 1742
Eco47I	GGWCC	1 cut(s)	1368
Eco57I	CTGAAG	1 cut(s)	285
EcoNI	CCTNNNNNAGG	2 cut(s)	813, 940
EcoRI	GAATTC	2 cut(s)	181, 1279
EcoRII	CCWGG	6 cut(s)	616, 808, 1000, 1342, 1509, 1587
EcoT14I	CCWWGG	2 cut(s)	55, 1610
ErhI	CCWWGG	2 cut(s)	55, 1610
FaeI	CATG	7 cut(s)	59, 467, 1091, 1228, 1413, 1640, 1744
FaqI	GGGAC	4 cut(s)	684, 731, 1076, 1196
FatI	CATG	7 cut(s)	55, 463, 1087, 1224, 1409, 1636, 1740
FauI	CCCGC	1 cut(s)	580
FbaI	TGATCA	1 cut(s)	1018
FblI	GTMKAC	1 cut(s)	1795
Fnu4HI	GCNGC	9 cut(s)	78, 344, 423, 576, 963, 992, 1516, 1581, 1680
Fsp4HI	GCNGC	9 cut(s)	78, 344, 423, 576, 963, 992, 1516, 1581, 1680
FspBI	CTAG	8 cut(s)	44, 234, 240, 942, 966, 975, 1052, 1287
FspI	TGCGCA	2 cut(s)	1113, 1670
GlaI	GCGC	3 cut(s)	347, 1113, 1670
GluI	GCNGC	9 cut(s)	78, 344, 423, 576, 963, 992, 1516, 1581, 1680
GsuI	CTGGAG	1 cut(s)	831
HaeII	RGCGCY	1 cut(s)	349
HaeIII	GGCC	2 cut(s)	1374, 1844
HapII	CCGG	5 cut(s)	1046, 1152, 1366, 1371, 1575
HgaI	GACGC	1 cut(s)	1386
HhaI	GCGC	3 cut(s)	348, 1114, 1671
Hin1II	CATG	7 cut(s)	59, 467, 1091, 1228, 1413, 1640, 1744
Hin6I	GCGC	3 cut(s)	346, 1112, 1669
HinP1I	GCGC	3 cut(s)	346, 1112, 1669
HinfI	GANTC	5 cut(s)	115, 133, 535, 851, 1499
HpaII	CCGG	5 cut(s)	1046, 1152, 1366, 1371, 1575
HphI	GGTGA	9 cut(s)	144, 239, 266, 329, 482, 511, 990, 1412, 1598
Hpy166II	GTNNAC	4 cut(s)	197, 230, 1067, 1796
Hpy188III	TCNNGA	9 cut(s)	137, 194, 240, 266, 848, 1028, 1146, 1218, 1575
Hpy8I	GTNNAC	4 cut(s)	197, 230, 1067, 1796
Hpy99I	CGWCG	2 cut(s)	70, 1473
HpyAV	CCTTC	2 cut(s)	1685, 1740
HpyCH4III	ACNGT	2 cut(s)	684, 1133
HpyCH4IV	ACGT	3 cut(s)	65, 199, 1201
HpyF10VI	GCNNNNNNNGC	3 cut(s)	40, 105, 219
HpyF3I	CTNAG	5 cut(s)	208, 329, 871, 1034, 1713
HpySE526I	ACGT	3 cut(s)	65, 199, 1201
Hsp92II	CATG	7 cut(s)	59, 467, 1091, 1228, 1413, 1640, 1744
HspAI	GCGC	3 cut(s)	346, 1112, 1669
Kpn2I	TCCGGA	1 cut(s)	1574
Ksp22I	TGATCA	1 cut(s)	1018
Kzo9I	GATC	4 cut(s)	85, 556, 1018, 1472
LmnI	GCTCC	5 cut(s)	340, 812, 1198, 1408, 1577
Lsp1109I	GCAGC	8 cut(s)	64, 434, 562, 949, 1003, 1527, 1567, 1666
LweI	GCATC	6 cut(s)	64, 298, 409, 442, 1180, 1628
MabI	ACCWGGT	2 cut(s)	616, 1000
MaeI	CTAG	8 cut(s)	44, 234, 240, 942, 966, 975, 1052, 1287
MaeII	ACGT	3 cut(s)	65, 199, 1201
MaeIII	GTNAC	2 cut(s)	517, 707
MalI	GATC	4 cut(s)	87, 558, 1020, 1474
MbiI	CCGCTC	3 cut(s)	274, 343, 532
MboI	GATC	4 cut(s)	85, 556, 1018, 1472
MboII	GAAGA	9 cut(s)	291, 678, 876, 975, 978, 998, 1001, 1461, 1536
MhlI	GDGCHC	1 cut(s)	1806
MlsI	TGGCCA	1 cut(s)	1844
MluCI	AATT	9 cut(s)	181, 412, 550, 1271, 1279, 1315, 1426, 1439, 1776
MluNI	TGGCCA	1 cut(s)	1844
MlyI	GAGTC	2 cut(s)	529, 1508
MmeI	TCCRAC	3 cut(s)	110, 841, 1608
Mox20I	TGGCCA	1 cut(s)	1844
MroI	TCCGGA	1 cut(s)	1574
MroXI	GAANNNNTTC	2 cut(s)	1464, 1852
MscI	TGGCCA	1 cut(s)	1844
MseI	TTAA	3 cut(s)	692, 1319, 1859
MslI	CAYNNNNRTG	5 cut(s)	468, 759, 975, 1641, 1809
Msp20I	TGGCCA	1 cut(s)	1844
MspA1I	CMGCKG	1 cut(s)	575
MspI	CCGG	5 cut(s)	1046, 1152, 1366, 1371, 1575
MspR9I	CCNGG	7 cut(s)	618, 810, 1002, 1344, 1366, 1511, 1589
Mva1269I	GAATGC	5 cut(s)	451, 843, 970, 994, 1567
MvaI	CCWGG	6 cut(s)	618, 810, 1002, 1344, 1511, 1589
MvnI	CGCG	1 cut(s)	112
MwoI	GCNNNNNNNGC	3 cut(s)	40, 105, 219
NciI	CCSGG	1 cut(s)	1366
NcoI	CCATGG	1 cut(s)	55
NdeII	GATC	4 cut(s)	85, 556, 1018, 1472
NlaIII	CATG	7 cut(s)	59, 467, 1091, 1228, 1413, 1640, 1744
NlaIV	GGNNCC	3 cut(s)	28, 1416, 1508
NmuCI	GTSAC	1 cut(s)	517
NsbI	TGCGCA	2 cut(s)	1113, 1670
PaqCI	CACCTGC	1 cut(s)	806
PctI	GAATGC	5 cut(s)	451, 843, 970, 994, 1567
PdmI	GAANNNNTTC	2 cut(s)	1464, 1852
PfeI	GAWTC	3 cut(s)	115, 133, 851
PflMI	CCANNNNNTGG	2 cut(s)	287, 809
PfoI	TCCNGGA	2 cut(s)	1342, 1364
PinAI	ACCGGT	2 cut(s)	1045, 1151
PkrI	GCNGC	9 cut(s)	79, 345, 424, 577, 964, 993, 1517, 1582, 1681
PleI	GAGTC	2 cut(s)	529, 1507
PpsI	GAGTC	2 cut(s)	529, 1507
Ppu21I	YACGTR	1 cut(s)	1202
PshAI	GACNNNNGTC	1 cut(s)	743
Psp6I	CCWGG	6 cut(s)	616, 808, 1000, 1342, 1509, 1587
PspGI	CCWGG	6 cut(s)	616, 808, 1000, 1342, 1509, 1587
PspN4I	GGNNCC	3 cut(s)	28, 1416, 1508
PspPI	GGNCC	2 cut(s)	1368, 1373
PsrI	GAACNNNNNNTAC	2 cut(s)	10, 42
PstNI	CAGNNNCTG	3 cut(s)	436, 1268, 1400
RsaI	GTAC	4 cut(s)	19, 583, 1050, 1260
RsaNI	GTAC	4 cut(s)	18, 582, 1049, 1259
RseI	CAYNNNNRTG	5 cut(s)	468, 759, 975, 1641, 1809
Rsr2I	CGGWCCG	1 cut(s)	1368
RsrII	CGGWCCG	1 cut(s)	1368
SaqAI	TTAA	3 cut(s)	692, 1319, 1859
SatI	GCNGC	9 cut(s)	78, 344, 423, 576, 963, 992, 1516, 1581, 1680
Sau3AI	GATC	4 cut(s)	85, 556, 1018, 1472
Sau96I	GGNCC	2 cut(s)	1368, 1373
ScaI	AGTACT	1 cut(s)	583
SchI	GAGTC	2 cut(s)	529, 1508
ScrFI	CCNGG	7 cut(s)	618, 810, 1002, 1344, 1366, 1511, 1589
SduI	GDGCHC	1 cut(s)	1806
SexAI	ACCWGGT	2 cut(s)	616, 1000
SfaNI	GCATC	6 cut(s)	64, 298, 409, 442, 1180, 1628
SfcI	CTRYAG	1 cut(s)	120
SinI	GGWCC	1 cut(s)	1368
SmiMI	CAYNNNNRTG	5 cut(s)	468, 759, 975, 1641, 1809
SmlI	CTYRAG	2 cut(s)	949, 1144
SmoI	CTYRAG	2 cut(s)	949, 1144
Sse9I	AATT	9 cut(s)	181, 412, 550, 1271, 1279, 1315, 1426, 1439, 1776
SsiI	CCGC	7 cut(s)	112, 274, 343, 532, 573, 1436, 1762
SspMI	CTAG	8 cut(s)	44, 234, 240, 942, 966, 975, 1052, 1287
StyD4I	CCNGG	7 cut(s)	616, 808, 1000, 1342, 1364, 1509, 1587
StyI	CCWWGG	2 cut(s)	55, 1610
TaaI	ACNGT	2 cut(s)	684, 1133
TaiI	ACGT	3 cut(s)	68, 202, 1204
TaqI	TCGA	5 cut(s)	68, 1029, 1447, 1471, 1767
TasI	AATT	9 cut(s)	181, 412, 550, 1271, 1279, 1315, 1426, 1439, 1776
TatI	WGTACW	1 cut(s)	581
TauI	GCSGC	1 cut(s)	346
TfiI	GAWTC	3 cut(s)	115, 133, 851
Tru1I	TTAA	3 cut(s)	692, 1319, 1859
Tru9I	TTAA	3 cut(s)	692, 1319, 1859
TscAI	CASTG	4 cut(s)	309, 378, 463, 1138
TseFI	GTSAC	1 cut(s)	517
TseI	GCWGC	8 cut(s)	77, 422, 575, 962, 991, 1515, 1580, 1679
Tsp45I	GTSAC	1 cut(s)	517
TspDTI	ATGAA	6 cut(s)	366, 615, 1293, 1536, 1560, 1653
TspGWI	ACGGA	1 cut(s)	884
TspRI	CASTG	4 cut(s)	309, 378, 463, 1138
Van91I	CCANNNNNTGG	2 cut(s)	287, 809
VpaK11BI	GGWCC	1 cut(s)	1368
XagI	CCTNNNNNAGG	2 cut(s)	813, 940
XapI	RAATTY	4 cut(s)	181, 1279, 1315, 1776
XbaI	TCTAGA	1 cut(s)	239
XcmI	CCANNNNNNNNNTGG	1 cut(s)	288
XmiI	GTMKAC	1 cut(s)	1795
XmnI	GAANNNNTTC	2 cut(s)	1464, 1852
XspI	CTAG	8 cut(s)	44, 234, 240, 942, 966, 975, 1052, 1287
ZrmI	AGTACT	1 cut(s)	583

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.