Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0006157

Physical Location & Seq

Genomic Coordinates Forward (+)

3301687 .. 3306440

Gene Structure 4754 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00160310.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2157 bp

ATGCAAGGGCAAAGGGGTACTATCGGTTCCTTGCCTGAAATGCTAGATTTTGACCATGGGAATACGTCGAATGATACTGCTTTAGATCAGCAGATTTGCTGGAATGGCACGCTTAATCCTGTAGAAAGTCGGATTCCTGACTATATACAATCACCTACTGATATGAATGTTGGTTTTGGGAATTCCATTGGTCGTGAACGTCAGAACTTAGGCAGATGGTGCTTAGGTGAACCTAGTTCTAGAAACTCACAGGGTGAAGTAAGTCGTGATGAGCGGAAACCAGATTTTGGATGGTCATCTTCAGTGGATGCTTGTGGTGAAGCTGGTCTGAGGTTAGAGGAGCGGCGCTATGAACCAACTAATAACCTTTCACTGGACAACAATGTGAATACTATTTTTACACCAAGTTCCAATTCTGATGCAGCTTCACAGCACCTGAACTTGAATGCAGGTTTCACTGGTCATGGTGGTGATAGTAGTCAAGTTATGGAATGTCCTAACACATACAAGTATAATGTCACCGAAAATGAGCGGACTCGTCCTACTGGTAATTCTGATCCTTTTCTGCTTCCTGCTGCAAGTACTGGATTTTTAGTGGGAGAAAATGATGGCAGACCCGGTTGTTCATTGGAGGGTCGCCGAGTATCTTGCAAAAGAAAGACTATGGAGGGACATTTAGGACAGTCTTCTTTAAGTGGAAGTTGTAGTTACTTTCAGCATACAGAAAGTGGTGCAAGGCCTTCTGTCCCTGCTCACTATAATGCAGGCATAAACATATCTACTCCATCACAAGAGGGAAATCCAAGACCTGGAGCAGGTGGTAGAGAACTTACTTCTGACAGCATTCCTGATTCAAATGTTGGAAGAAGCTCAGAAAGTTCTCACAGAAACTTCCGTGTGAGAATAAATCCATCCAATCAACAGAACACTATACCCTCAACTAGGTTCTCAAGTGGGAGGGCTACTAGGCATTCTAGTGGTTCTTCTTCCCAGCATTCACCTGGTCTTCTTCCAGTTGATCATAGTCTCGACCTGAGACCAGCACCGGTACTAGATAATATGACTTCACAAAACCAGCCAGTTGTCCATGTCCCTGCATTGCCACAAAATGCGCAGTCTTTGAGGTGGAACAGTGGTTCAAGCTCAAGAACCGGTGGTTTATCAAACTCTGTGTTTATGGGGGACAGAGATGCTCCACTACGTGAGGAAGCGAGTTCCAGAAGCATGGCAAGACAGATTTTGGGTCATCCTATTTTTGTACCAGCAACTGAATTGAGGAATTCTGCTAGACTTTCAGCAGGTTCATCCAGTAGAAATCTAACAGGTGGAAATGCAAGTATTCCTGGAAATGTTGCTTCTACATCCCGGACCGGCCCAAGTTCAAGCACTCATCCAGCATCTGCTCCTACATGGGTTCCTCACCACAATTCTCATCCGCAATTTCCTCGAAGATTATCTGAATATGTTCGTCGATCATTGTTTTCTGCTGGTGGTAATGAGTCTGGGAACCAGGGCAGCAACTTTTTGCCAATGCGTTCTGGTTCTTCATCATCACAGGAGGCTGTGCATTCATCCGGAGCTGCTAACCTGGGTCATCATCAGCCTCACCCAAGGTCTGCATCATGGTTGGAGAGACATGGAGATGGACTTGGGCTTCCCTATTCATTGCGCACTTTGGCTGCTGGTGGAGAAGGAAACAACAGGCTTGTATCTGAGCAGATTTGCAATGTCTTGGGTCTCATGCGAAGGGCGAGAGCTTGCGGTTTGAGTTCCAAGGATGTTATGATTCTTGACCAGTCGATGCTGTTTGGAGTGGCTGATATTCACGACCGGCATAGGGATATGAGACTAGATGTTGACAATATGTCTTACGAGGAGTTATTGGCCCTGGAAGAGCGCATTGGAAATGTTAACACTGGATTGAGTGAAGAAATTATATGTAATCGCTTGAAACATAAGAAGTATATTGCCGAGGCATCTCAAGCAGAGAAGGAGACGGAGACGGAACCTTGTTGTATATGTCAGGAGGAATATAATGAAGGAGATGATCTTGGAATGCTTGAATGTGGGCATGATTTCCATAGCGACTGCATCAAACAATGGCTGACGCACAAGAATCTGTGCCCCATTTGTAAAACTACAGCCTTGGCAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008285 GO:0009056 GO:0009057 GO:0009791 GO:0009908 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0019941 GO:0022414 GO:0030163 GO:0031624 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0040008 GO:0042127 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044390 GO:0045926 GO:0046620 GO:0046621 GO:0048367 GO:0048437 GO:0048518 GO:0048519 GO:0048523 GO:0048608 GO:0048638 GO:0048640 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051094 GO:0051239 GO:0051240 GO:0051241 GO:0051603 GO:0051865 GO:0061458 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0090567 GO:0099402 GO:0140096 GO:1900055 GO:1900057 GO:1901564 GO:1901565 GO:1901575 GO:1905623 GO:2000024 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

718

Amino Acids

77.78

Weight (kDa)

6.26

Isoelectric Point (pI)

57.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-rbx1	PF12678	666 - 712	4.5e-09	RING-H2 zinc finger domain
zf-RING_2	PF13639	671 - 712	1.1e-12	Ring finger domain
zf-C3HC4_2	PF13923	671 - 711	8.4e-09	Zinc finger, C3HC4 type (RING finger)
zf-RING_11	PF17123	671 - 698	5.3e-07	RING-like zinc finger
zf-C3HC4	PF00097	671 - 711	4.9e-07	Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX	PF13445	671 - 709	1.7e-06	RING-type zinc-finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006157)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G45180 AT1G45180 AT1G45180 AT1G45180 AT5G42940 AT5G42940
fragaria_vesca	FvH4_2g34090 FvH4_2g34090
malus_domestica	MD08G1097400.v1.1 MD15G1079700.v1.1
prunus_persica	Prupe.1G432700_v2.0.a1
pyrus_communis	pycom08g07950 pycom15g07410 pycom15g07420
rosa_chinensis	RchiOBHm_Chr6g0308261
rosa_laevigata	RLG00000010653
rosa_multiflora	Rmu_ssc0000355.1_g000008
rosa_roxburghii	Rroxscaffold_7G00160310
rosa_rugosa	Rorug06G0365500 Rorug06G0365600 Rorug06G0365700 Rorug06G0365800
rosa_samantha	Rh6AG474500 Rh6BG485200 Rh6CG490200 Rh6DG476600
rosa_wichuraiana	Rw6G041390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	806
Acc16I	TGCGCA	2 cut(s)	1113, 1670
Acc36I	ACCTGC	3 cut(s)	440, 806, 1289
AccB7I	CCANNNNNTGG	2 cut(s)	287, 809
AccBSI	CCGCTC	3 cut(s)	274, 343, 532
AccIII	TCCGGA	1 cut(s)	1574
AciI	CCGC	5 cut(s)	274, 343, 532, 1436, 1761
AclWI	GGATC	1 cut(s)	551
AcsI	RAATTY	2 cut(s)	181, 1279
AcuI	CTGAAG	1 cut(s)	285
AdeI	CACNNNGTG	2 cut(s)	254, 1202
AfaI	GTAC	4 cut(s)	19, 583, 1050, 1260
AfiI	CCNNNNNNNGG	6 cut(s)	287, 373, 809, 815, 942, 1837
AgeI	ACCGGT	2 cut(s)	1045, 1151
AgsI	TTSAA	6 cut(s)	445, 855, 1140, 1383, 1951, 2063
AhdI	GACNNNNNGTC	1 cut(s)	1864
AjnI	CCWGG	6 cut(s)	808, 1000, 1342, 1509, 1587, 1887
AjuI	GAANNNNNNNTTGG	4 cut(s)	397, 429, 1884, 1916
AloI	GAACNNNNNNTCC	2 cut(s)	1120, 1152
AluBI	AGCT	6 cut(s)	323, 425, 870, 1143, 1580, 1757
AluI	AGCT	6 cut(s)	323, 425, 870, 1143, 1580, 1757
Alw26I	GTCTC	7 cut(s)	1030, 1031, 1627, 1742, 1840, 1988, 1994
AlwI	GGATC	1 cut(s)	551
AlwNI	CAGNNNCTG	3 cut(s)	436, 1268, 1400
Aor13HI	TCCGGA	1 cut(s)	1574
AoxI	GGCC	3 cut(s)	737, 1372, 1884
ApeKI	GCWGC	5 cut(s)	422, 575, 1515, 1580, 1679
ApoI	RAATTY	2 cut(s)	181, 1279
AsiGI	ACCGGT	2 cut(s)	1045, 1151
Asp700I	GAANNNNTTC	1 cut(s)	1464
AspLEI	GCGC	4 cut(s)	348, 1114, 1671, 1899
AspS9I	GGNCC	3 cut(s)	1368, 1373, 1885
AsuC2I	CCSGG	2 cut(s)	618, 1366
AsuHPI	GGTGA	9 cut(s)	144, 239, 266, 329, 482, 511, 990, 1412, 1598
AvaII	GGWCC	1 cut(s)	1368
BaeGI	GKGCMC	1 cut(s)	2126
BbsI	GAAGAC	2 cut(s)	678, 998
BbvI	GCAGC	5 cut(s)	434, 562, 1527, 1567, 1666
BccI	CCATC	6 cut(s)	210, 285, 602, 793, 919, 1637
BcgI	CGANNNNNNTGC	4 cut(s)	630, 664, 1427, 1461
BciT130I	CCWGG	6 cut(s)	810, 1002, 1344, 1511, 1589, 1889
BclI	TGATCA	1 cut(s)	1018
BcnI	CCSGG	2 cut(s)	618, 1366
BcoDI	GTCTC	7 cut(s)	1030, 1031, 1627, 1742, 1840, 1988, 1994
BfaI	CTAG	9 cut(s)	44, 234, 240, 942, 966, 975, 1052, 1287, 1850
BfmI	CTRYAG	2 cut(s)	120, 2139
BfoI	RGCGCY	1 cut(s)	349
BfuAI	ACCTGC	3 cut(s)	440, 806, 1289
BisI	GCNGC	6 cut(s)	344, 423, 576, 1516, 1581, 1680
BlsI	GCNGC	6 cut(s)	345, 424, 577, 1517, 1582, 1681
BmcAI	AGTACT	1 cut(s)	583
Bme1390I	CCNGG	8 cut(s)	618, 810, 1002, 1344, 1366, 1511, 1589, 1889
Bme18I	GGWCC	1 cut(s)	1368
BmeRI	GACNNNNNGTC	1 cut(s)	1864
BmgT120I	GGNCC	3 cut(s)	1368, 1373, 1885
BmiI	GGNNCC	4 cut(s)	28, 1416, 1508, 2007
BmrFI	CCNGG	8 cut(s)	618, 810, 1002, 1344, 1366, 1511, 1589, 1889
BmsI	GCATC	8 cut(s)	298, 409, 1180, 1406, 1628, 1791, 1985, 2100
BpiI	GAAGAC	2 cut(s)	678, 998
BpmI	CTGGAG	1 cut(s)	831
Bpu10I	CCTNAGC	1 cut(s)	223
BpuEI	CTTGAG	3 cut(s)	934, 1129, 1965
BpuMI	CCSGG	2 cut(s)	618, 1366
BsaAI	YACGTR	1 cut(s)	1202
BsaBI	GATNNNNATC	1 cut(s)	295
BsaI	GGTCTC	2 cut(s)	1030, 1742
BsaJI	CCNNGG	8 cut(s)	55, 1510, 1588, 1610, 1773, 1887, 1971, 2145
BsaWI	WCCGGW	3 cut(s)	1045, 1151, 1574
Bsc4I	CCNNNNNNNGG	6 cut(s)	287, 373, 809, 815, 942, 1837
Bse118I	RCCGGY	4 cut(s)	1045, 1151, 1370, 1830
Bse1I	ACTGG	9 cut(s)	378, 463, 550, 589, 1013, 1079, 1308, 1795, 1921
Bse3DI	GCAATG	3 cut(s)	1097, 1664, 1732
Bse8I	GATNNNNATC	1 cut(s)	295
BseAI	TCCGGA	1 cut(s)	1574
BseBI	CCWGG	6 cut(s)	810, 1002, 1344, 1511, 1589, 1889
BseDI	CCNNGG	8 cut(s)	55, 1510, 1588, 1610, 1773, 1887, 1971, 2145
BseJI	GATNNNNATC	1 cut(s)	295
BseLI	CCNNNNNNNGG	6 cut(s)	287, 373, 809, 815, 942, 1837
BseMI	GCAATG	3 cut(s)	1097, 1664, 1732
BseMII	CTCAG	4 cut(s)	320, 885, 1025, 1704
BseNI	ACTGG	9 cut(s)	378, 463, 550, 589, 1013, 1079, 1308, 1795, 1921
BseRI	GAGGAG	2 cut(s)	353, 1889
BseSI	GKGCMC	1 cut(s)	2126
BseXI	GCAGC	5 cut(s)	434, 562, 1527, 1567, 1666
BseYI	CCCAGC	1 cut(s)	990
Bsh1285I	CGRYCG	1 cut(s)	1831
BshFI	GGCC	3 cut(s)	739, 1374, 1886
BshTI	ACCGGT	2 cut(s)	1045, 1151
BsiEI	CGRYCG	1 cut(s)	1831
BsiSI	CCGG	7 cut(s)	618, 1046, 1152, 1366, 1371, 1575, 1831
BslFI	GGGAC	4 cut(s)	684, 731, 1076, 1196
BslI	CCNNNNNNNGG	6 cut(s)	287, 373, 809, 815, 942, 1837
BsmAI	GTCTC	7 cut(s)	1030, 1031, 1627, 1742, 1840, 1988, 1994
BsmBI	CGTCTC	2 cut(s)	1988, 1994
BsmFI	GGGAC	4 cut(s)	684, 731, 1076, 1196
BsmI	GAATGC	6 cut(s)	451, 843, 970, 994, 1567, 2061
BsnI	GGCC	3 cut(s)	739, 1374, 1886
Bso31I	GGTCTC	2 cut(s)	1030, 1742
Bsp1286I	GDGCHC	1 cut(s)	2126
Bsp13I	TCCGGA	1 cut(s)	1574
Bsp143I	GATC	5 cut(s)	85, 556, 1018, 1472, 2047
Bsp19I	CCATGG	1 cut(s)	55
BspACI	CCGC	5 cut(s)	274, 343, 532, 1436, 1761
BspANI	GGCC	3 cut(s)	739, 1374, 1886
BspCNI	CTCAG	4 cut(s)	321, 884, 1026, 1705
BspEI	TCCGGA	1 cut(s)	1574
BspLI	GGNNCC	4 cut(s)	28, 1416, 1508, 2007
BspMI	ACCTGC	3 cut(s)	440, 806, 1289
BspPI	GGATC	1 cut(s)	551
BspQI	GCTCTTC	1 cut(s)	1887
BspTNI	GGTCTC	2 cut(s)	1030, 1742
BsrBI	CCGCTC	3 cut(s)	274, 343, 532
BsrDI	GCAATG	3 cut(s)	1097, 1664, 1732
BsrFI	RCCGGY	4 cut(s)	1045, 1151, 1370, 1830
BsrI	ACTGG	9 cut(s)	378, 463, 550, 589, 1013, 1079, 1308, 1795, 1921
BssAI	RCCGGY	4 cut(s)	1045, 1151, 1370, 1830
BssECI	CCNNGG	8 cut(s)	55, 1510, 1588, 1610, 1773, 1887, 1971, 2145
BssMI	GATC	5 cut(s)	85, 556, 1018, 1472, 2047
BssT1I	CCWWGG	4 cut(s)	55, 1610, 1773, 2145
Bst2UI	CCWGG	6 cut(s)	810, 1002, 1344, 1511, 1589, 1889
Bst4CI	ACNGT	2 cut(s)	684, 1133
Bst6I	CTCTTC	1 cut(s)	1887
BstAPI	GCANNNNNTGC	1 cut(s)	219
BstBAI	YACGTR	1 cut(s)	1202
BstC8I	GCNNGC	3 cut(s)	110, 766, 1759
BstDEI	CTNAG	6 cut(s)	208, 223, 329, 871, 1034, 1713
BstDSI	CCRYGG	1 cut(s)	55
BstENI	CCTNNNNNAGG	2 cut(s)	813, 940
BstH2I	RGCGCY	1 cut(s)	349
BstHHI	GCGC	4 cut(s)	348, 1114, 1671, 1899
BstKTI	GATC	5 cut(s)	88, 559, 1021, 1475, 2050
BstMAI	GTCTC	7 cut(s)	1030, 1031, 1627, 1742, 1840, 1988, 1994
BstMBI	GATC	5 cut(s)	85, 556, 1018, 1472, 2047
BstMCI	CGRYCG	1 cut(s)	1831
BstMWI	GCNNNNNNNGC	4 cut(s)	40, 105, 219, 1982
BstNI	CCWGG	6 cut(s)	810, 1002, 1344, 1511, 1589, 1889
BstSCI	CCNGG	8 cut(s)	616, 808, 1000, 1342, 1364, 1509, 1587, 1887
BstSFI	CTRYAG	2 cut(s)	120, 2139
BstSLI	GKGCMC	1 cut(s)	2126
BstV1I	GCAGC	5 cut(s)	434, 562, 1527, 1567, 1666
BstV2I	GAAGAC	2 cut(s)	678, 998
BstXI	CCANNNNNNTGG	1 cut(s)	1225
BsuRI	GGCC	3 cut(s)	739, 1374, 1886
BtgI	CCRYGG	1 cut(s)	55
BtsIMutI	CAGTG	5 cut(s)	309, 371, 456, 1138, 1914
BveI	ACCTGC	3 cut(s)	440, 806, 1289
Cac8I	GCNNGC	3 cut(s)	110, 766, 1759
CaiI	CAGNNNCTG	3 cut(s)	436, 1268, 1400
CfoI	GCGC	4 cut(s)	348, 1114, 1671, 1899
Cfr10I	RCCGGY	4 cut(s)	1045, 1151, 1370, 1830
Cfr13I	GGNCC	3 cut(s)	1368, 1373, 1885
CpoI	CGGWCCG	1 cut(s)	1368
CseI	GACGC	1 cut(s)	2116
CsiI	ACCWGGT	1 cut(s)	1000
Csp6I	GTAC	4 cut(s)	18, 582, 1049, 1259
CspAI	ACCGGT	2 cut(s)	1045, 1151
CspI	CGGWCCG	1 cut(s)	1368
CviQI	GTAC	4 cut(s)	18, 582, 1049, 1259
DdeI	CTNAG	6 cut(s)	208, 223, 329, 871, 1034, 1713
DpnI	GATC	5 cut(s)	87, 558, 1020, 1474, 2049
DpnII	GATC	5 cut(s)	85, 556, 1018, 1472, 2047
DraIII	CACNNNGTG	2 cut(s)	254, 1202
DriI	GACNNNNNGTC	1 cut(s)	1864
Eam1104I	CTCTTC	1 cut(s)	1887
Eam1105I	GACNNNNNGTC	1 cut(s)	1864
EarI	CTCTTC	1 cut(s)	1887
Eco130I	CCWWGG	4 cut(s)	55, 1610, 1773, 2145
Eco147I	AGGCCT	1 cut(s)	739
Eco31I	GGTCTC	2 cut(s)	1030, 1742
Eco47I	GGWCC	1 cut(s)	1368
Eco57I	CTGAAG	1 cut(s)	285
EcoNI	CCTNNNNNAGG	2 cut(s)	813, 940
EcoRI	GAATTC	2 cut(s)	181, 1279
EcoRII	CCWGG	6 cut(s)	808, 1000, 1342, 1509, 1587, 1887
EcoT14I	CCWWGG	4 cut(s)	55, 1610, 1773, 2145
ErhI	CCWWGG	4 cut(s)	55, 1610, 1773, 2145
Esp3I	CGTCTC	2 cut(s)	1988, 1994
FaqI	GGGAC	4 cut(s)	684, 731, 1076, 1196
FbaI	TGATCA	1 cut(s)	1018
Fnu4HI	GCNGC	6 cut(s)	344, 423, 576, 1516, 1581, 1680
Fsp4HI	GCNGC	6 cut(s)	344, 423, 576, 1516, 1581, 1680
FspBI	CTAG	9 cut(s)	44, 234, 240, 942, 966, 975, 1052, 1287, 1850
FspI	TGCGCA	2 cut(s)	1113, 1670
GlaI	GCGC	4 cut(s)	347, 1113, 1670, 1898
GluI	GCNGC	6 cut(s)	344, 423, 576, 1516, 1581, 1680
GsaI	CCCAGC	1 cut(s)	994
GsuI	CTGGAG	1 cut(s)	831
HaeII	RGCGCY	1 cut(s)	349
HaeIII	GGCC	3 cut(s)	739, 1374, 1886
HapII	CCGG	7 cut(s)	618, 1046, 1152, 1366, 1371, 1575, 1831
HgaI	GACGC	1 cut(s)	2116
HhaI	GCGC	4 cut(s)	348, 1114, 1671, 1899
Hin6I	GCGC	4 cut(s)	346, 1112, 1669, 1897
HinP1I	GCGC	4 cut(s)	346, 1112, 1669, 1897
HincII	GTYRAC	2 cut(s)	1858, 1912
HindII	GTYRAC	2 cut(s)	1858, 1912
HinfI	GANTC	6 cut(s)	133, 535, 851, 1499, 1786, 2116
HpaI	GTTAAC	1 cut(s)	1912
HpaII	CCGG	7 cut(s)	618, 1046, 1152, 1366, 1371, 1575, 1831
HphI	GGTGA	9 cut(s)	144, 239, 266, 329, 482, 511, 990, 1412, 1598
Hpy166II	GTNNAC	4 cut(s)	197, 230, 1858, 1912
Hpy188I	TCNGA	9 cut(s)	132, 204, 330, 418, 556, 838, 874, 1459, 1714
Hpy8I	GTNNAC	4 cut(s)	197, 230, 1858, 1912
Hpy99I	CGWCG	2 cut(s)	70, 1473
HpyAV	CCTTC	5 cut(s)	750, 1685, 1740, 1984, 2033
HpyCH4III	ACNGT	2 cut(s)	684, 1133
HpyCH4IV	ACGT	3 cut(s)	65, 199, 1201
HpyF10VI	GCNNNNNNNGC	4 cut(s)	40, 105, 219, 1982
HpyF3I	CTNAG	6 cut(s)	208, 223, 329, 871, 1034, 1713
HpySE526I	ACGT	3 cut(s)	65, 199, 1201
HspAI	GCGC	4 cut(s)	346, 1112, 1669, 1897
Kpn2I	TCCGGA	1 cut(s)	1574
Ksp22I	TGATCA	1 cut(s)	1018
KspAI	GTTAAC	1 cut(s)	1912
Kzo9I	GATC	5 cut(s)	85, 556, 1018, 1472, 2047
LguI	GCTCTTC	1 cut(s)	1887
LmnI	GCTCC	5 cut(s)	340, 812, 1198, 1408, 1577
Lsp1109I	GCAGC	5 cut(s)	434, 562, 1527, 1567, 1666
LweI	GCATC	8 cut(s)	298, 409, 1180, 1406, 1628, 1791, 1985, 2100
MabI	ACCWGGT	1 cut(s)	1000
MaeI	CTAG	9 cut(s)	44, 234, 240, 942, 966, 975, 1052, 1287, 1850
MaeII	ACGT	3 cut(s)	65, 199, 1201
MaeIII	GTNAC	2 cut(s)	517, 707
MalI	GATC	5 cut(s)	87, 558, 1020, 1474, 2049
MbiI	CCGCTC	3 cut(s)	274, 343, 532
MboI	GATC	5 cut(s)	85, 556, 1018, 1472, 2047
MhlI	GDGCHC	1 cut(s)	2126
MluCI	AATT	8 cut(s)	181, 412, 550, 1271, 1279, 1426, 1439, 1932
MlyI	GAGTC	2 cut(s)	529, 1508
MmeI	TCCRAC	3 cut(s)	110, 841, 1608
MroI	TCCGGA	1 cut(s)	1574
MroXI	GAANNNNTTC	1 cut(s)	1464
MseI	TTAA	3 cut(s)	114, 692, 1911
MslI	CAYNNNNRTG	4 cut(s)	468, 759, 975, 1641
MspI	CCGG	7 cut(s)	618, 1046, 1152, 1366, 1371, 1575, 1831
MspR9I	CCNGG	8 cut(s)	618, 810, 1002, 1344, 1366, 1511, 1589, 1889
Mva1269I	GAATGC	6 cut(s)	451, 843, 970, 994, 1567, 2061
MvaI	CCWGG	6 cut(s)	810, 1002, 1344, 1511, 1589, 1889
MwoI	GCNNNNNNNGC	4 cut(s)	40, 105, 219, 1982
NciI	CCSGG	2 cut(s)	618, 1366
NcoI	CCATGG	1 cut(s)	55
NdeII	GATC	5 cut(s)	85, 556, 1018, 1472, 2047
NlaIV	GGNNCC	4 cut(s)	28, 1416, 1508, 2007
NmeAIII	GCCGAG	2 cut(s)	665, 1996
NmuCI	GTSAC	1 cut(s)	517
NsbI	TGCGCA	2 cut(s)	1113, 1670
PaqCI	CACCTGC	1 cut(s)	806
PceI	AGGCCT	1 cut(s)	739
PciSI	GCTCTTC	1 cut(s)	1887
PctI	GAATGC	6 cut(s)	451, 843, 970, 994, 1567, 2061
PdmI	GAANNNNTTC	1 cut(s)	1464
PfeI	GAWTC	4 cut(s)	133, 851, 1786, 2116
PflMI	CCANNNNNTGG	2 cut(s)	287, 809
PfoI	TCCNGGA	2 cut(s)	1342, 1364
PinAI	ACCGGT	2 cut(s)	1045, 1151
PkrI	GCNGC	6 cut(s)	345, 424, 577, 1517, 1582, 1681
PleI	GAGTC	2 cut(s)	529, 1507
PpsI	GAGTC	2 cut(s)	529, 1507
Ppu21I	YACGTR	1 cut(s)	1202
Psp6I	CCWGG	6 cut(s)	808, 1000, 1342, 1509, 1587, 1887
PspFI	CCCAGC	1 cut(s)	990
PspGI	CCWGG	6 cut(s)	808, 1000, 1342, 1509, 1587, 1887
PspN4I	GGNNCC	4 cut(s)	28, 1416, 1508, 2007
PspPI	GGNCC	3 cut(s)	1368, 1373, 1885
PsrI	GAACNNNNNNTAC	2 cut(s)	10, 42
PstNI	CAGNNNCTG	3 cut(s)	436, 1268, 1400
RsaI	GTAC	4 cut(s)	19, 583, 1050, 1260
RsaNI	GTAC	4 cut(s)	18, 582, 1049, 1259
RseI	CAYNNNNRTG	4 cut(s)	468, 759, 975, 1641
Rsr2I	CGGWCCG	1 cut(s)	1368
RsrII	CGGWCCG	1 cut(s)	1368
SapI	GCTCTTC	1 cut(s)	1887
SaqAI	TTAA	3 cut(s)	114, 692, 1911
SatI	GCNGC	6 cut(s)	344, 423, 576, 1516, 1581, 1680
Sau3AI	GATC	5 cut(s)	85, 556, 1018, 1472, 2047
Sau96I	GGNCC	3 cut(s)	1368, 1373, 1885
ScaI	AGTACT	1 cut(s)	583
SchI	GAGTC	2 cut(s)	529, 1508
ScrFI	CCNGG	8 cut(s)	618, 810, 1002, 1344, 1366, 1511, 1589, 1889
SduI	GDGCHC	1 cut(s)	2126
SexAI	ACCWGGT	1 cut(s)	1000
SfaNI	GCATC	8 cut(s)	298, 409, 1180, 1406, 1628, 1791, 1985, 2100
SfcI	CTRYAG	2 cut(s)	120, 2139
SinI	GGWCC	1 cut(s)	1368
SmiMI	CAYNNNNRTG	4 cut(s)	468, 759, 975, 1641
SmlI	CTYRAG	3 cut(s)	949, 1144, 1980
SmoI	CTYRAG	3 cut(s)	949, 1144, 1980
Sse9I	AATT	8 cut(s)	181, 412, 550, 1271, 1279, 1426, 1439, 1932
SseBI	AGGCCT	1 cut(s)	739
SsiI	CCGC	5 cut(s)	274, 343, 532, 1436, 1761
SspMI	CTAG	9 cut(s)	44, 234, 240, 942, 966, 975, 1052, 1287, 1850
StuI	AGGCCT	1 cut(s)	739
StyD4I	CCNGG	8 cut(s)	616, 808, 1000, 1342, 1364, 1509, 1587, 1887
StyI	CCWWGG	4 cut(s)	55, 1610, 1773, 2145
TaaI	ACNGT	2 cut(s)	684, 1133
TaiI	ACGT	3 cut(s)	68, 202, 1204
TaqI	TCGA	5 cut(s)	68, 1029, 1447, 1471, 1799
TasI	AATT	8 cut(s)	181, 412, 550, 1271, 1279, 1426, 1439, 1932
TatI	WGTACW	1 cut(s)	581
TauI	GCSGC	1 cut(s)	346
TfiI	GAWTC	4 cut(s)	133, 851, 1786, 2116
Tru1I	TTAA	3 cut(s)	114, 692, 1911
Tru9I	TTAA	3 cut(s)	114, 692, 1911
TscAI	CASTG	5 cut(s)	309, 378, 463, 1138, 1921
TseFI	GTSAC	1 cut(s)	517
TseI	GCWGC	5 cut(s)	422, 575, 1515, 1580, 1679
Tsp45I	GTSAC	1 cut(s)	517
TspDTI	ATGAA	8 cut(s)	179, 366, 615, 1293, 1536, 1560, 1653, 2052
TspGWI	ACGGA	3 cut(s)	884, 2012, 2018
TspRI	CASTG	5 cut(s)	309, 378, 463, 1138, 1921
Van91I	CCANNNNNTGG	2 cut(s)	287, 809
VpaK11BI	GGWCC	1 cut(s)	1368
XagI	CCTNNNNNAGG	2 cut(s)	813, 940
XapI	RAATTY	2 cut(s)	181, 1279
XbaI	TCTAGA	1 cut(s)	239
XcmI	CCANNNNNNNNNTGG	2 cut(s)	288, 998
XmnI	GAANNNNTTC	1 cut(s)	1464
XspI	CTAG	9 cut(s)	44, 234, 240, 942, 966, 975, 1052, 1287, 1850
ZrmI	AGTACT	1 cut(s)	583

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.