Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0006157

Physical Location & Seq

Genomic Coordinates Reverse (-)

68999146 .. 69004744

Gene Structure 5599 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG485200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGCAAGGGCAGAGGGGTACTATCGGTTCCTTGCCTGAAATGCTAGATTTTGACCATGGGAATACGTCGAATGATGCTGCTTTAGATCAGCAGATTTGCTGGAATGGCACGCGGAATCCTGTAGAAAGTCGGATTCCTGACTATATACAATCACCTACTGATATGAATGTTGGTTTTGGGAATTCCATTGGTCGTGAACGTCAGAACTTAGGCAGATGGTGCTTAGGTGAGCCTAGTTCTAGAAACTCACAGGGTGAAGTAAGTCGTGATGAGCGGAAACCAGATTTTGGATGGTCATCTTCAGTGGATGCTTGTGGTGAAGCTGGTCTGAGGTTAGAGGAGCGGCGCTATGAACCAACTAATAACCTTTCACTGGACAACAATGTGAATACTATTTTTACACCAAGTTCCAATTCTGATGCAGCTTCACAGCATCTGAACTTGAATGCAGGTTTCACTGGTCATGGTGGTGATAGTAGTCAAGTTATGGAATGTCCTAACACATACAAGTATAATGTCACCGAAAATGAGCGGACTCGTCCTACTGGTAATTCTGATCCTTTTCTGCTTCCTGCTGCAACTACTGGATTTTTAGTGGGAGAAAATGATGGCAGACCCGGTTGTTCATTGGAGGGTCGCCGCGTATCTTGCAAAAGAAAGACTATGGAGGGACATTTAGGACAGTCTTCTTTAAGTGGAAGTTGTAGTTACTTTCAGCATACAGAAAGTGGTGCAAGGCCTTCTGTCCCTGCTCACTATAATGCAGGCATAAACATATCTACTCCATCACAAGAGGGAAATCCAAGACCTGGAGCAGGTGGTAGAGAACTTACTTCTGACAGCATTCCTGATTCAAATGTTGGAAGAGGCTCAGAAAGTTCTCACAGAAACTTCTGTGTGAGAATAAATCCATCCAATCAACAAAACACTATACCCTCAACTAGGTTCTCAAGTGGGAGGGCTGCTAGGCATTCTAGTGGTTCTTCTTCGCAGCATTCACCTGGTCTTCTTCCAGTTGATCATAGTCTCGACCTGCAACCAGCACCGGTACTAGATAATATGAGTTCACAAAACCAGCCAGTTGTCCATGTCCCTGCATTGCCACAAAATGCGCAGTCTTTGAGGTGGAACAGTGGTTCAAGCTCAAGAACCGGTGGCTTATCAAACTCTGTGTTTATGGGGGACAGAGATGCTCCACTATGTGAGGAAGCGAGTTCAAGAAGCATGCCAAGACAGATTTTGGGTCATCCTATTTTTGTACCAGCAACTGAATTGAGGAATTCTGCTAGACTTTCAGCAGGTTCATCCAGTAGAAATTTAACAGGTGGAAATGCAAGTATTCCTGGAAATGTTGCTTCTACATCCCGGACCGGCCCAAGTTCAAGCACTCATCCAGCGTCTGCTCCTACATGGGTTCCTCACCACAATTCTCATCCGCAATTTCCTCGAAGATTATCTGAATATGTTCGTCGATCATTGTTTTCTGCTGGTGGTAATGAGTCTGGGAACCAGGGCAGCAACTTTTTGCCAATGCGTTCTGGTTCTTCATCATCACAGGAGGCTGTGCATTCATCCGGAGCTGCTAACCTGGGTCATCATCAGCCTCACCCAAGGTCTGCATCGTGGTTGGAGAGACATGGAGATGGACTTGGGCTTCCCTATTCATTGCGCACTTTGGCTGCTGGTGGAGAAGGAAACAACAGGCTTGTATCTGAGCAGATTTGCAATGTCTTGGGTCTCATGCGAAGGGGCGAGAGCTTGGGGTTCGAGGATGTTATGATTCTTGACCAGTCGATGCTGTTTGGAGTGGCTGATATTCATGACCGGCATAGGGATATGAGACTAGATGTTGACAATATGTCTTACGAGGAGTTATTGGCTCTGGAAGAGCGCATTGGAAATGTGAACACTGGATTGAGTGAAGAAATTATATCGAATCGCTTGAAACATAAGAAGTATATTGCCGAGGCATCTCAAGCAGAGACGGAGACGGAGCCTTGTTGTATATGTCAGGAGGAATATAATGAAGGAGATGATCTTGGAATGCTTGAATGTGGGCATGATTTCCATAGCGACTGCATCAAACAATGGCTGACGCACAAGAATCTGTGCCCCATTTGTAAAACTACAGCCTTGGCAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008285 GO:0009056 GO:0009057 GO:0009791 GO:0009908 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0019941 GO:0022414 GO:0030163 GO:0031624 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0040008 GO:0042127 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044390 GO:0045926 GO:0046620 GO:0046621 GO:0048367 GO:0048437 GO:0048518 GO:0048519 GO:0048523 GO:0048608 GO:0048638 GO:0048640 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051094 GO:0051239 GO:0051240 GO:0051241 GO:0051603 GO:0051865 GO:0061458 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0090567 GO:0099402 GO:0140096 GO:1900055 GO:1900057 GO:1901564 GO:1901565 GO:1901575 GO:1905623 GO:2000024 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

714

Amino Acids

77.19

Weight (kDa)

5.93

Isoelectric Point (pI)

57.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-rbx1	PF12678	664 - 708	8e-09	RING-H2 zinc finger domain
zf-RING_2	PF13639	667 - 708	1.1e-12	Ring finger domain
zf-C3HC4_2	PF13923	667 - 707	8.4e-09	Zinc finger, C3HC4 type (RING finger)
zf-RING_11	PF17123	667 - 694	5.3e-07	RING-like zinc finger
zf-C3HC4	PF00097	667 - 707	4.9e-07	Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX	PF13445	667 - 705	1.6e-06	RING-type zinc-finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006157)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G45180 AT1G45180 AT1G45180 AT1G45180 AT5G42940 AT5G42940
fragaria_vesca	FvH4_2g34090 FvH4_2g34090
malus_domestica	MD08G1097400.v1.1 MD15G1079700.v1.1
prunus_persica	Prupe.1G432700_v2.0.a1
pyrus_communis	pycom08g07950 pycom15g07410 pycom15g07420
rosa_chinensis	RchiOBHm_Chr6g0308261
rosa_laevigata	RLG00000010653
rosa_multiflora	Rmu_ssc0000355.1_g000008
rosa_roxburghii	Rroxscaffold_7G00160310
rosa_rugosa	Rorug06G0365500 Rorug06G0365600 Rorug06G0365700 Rorug06G0365800
rosa_samantha	Rh6AG474500 Rh6BG485200 Rh6CG490200 Rh6DG476600
rosa_wichuraiana	Rw6G041390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	806
Acc16I	TGCGCA	2 cut(s)	1113, 1670
Acc36I	ACCTGC	4 cut(s)	440, 806, 1041, 1289
AccB7I	CCANNNNNTGG	2 cut(s)	287, 809
AccBSI	CCGCTC	3 cut(s)	274, 343, 532
AccII	CGCG	2 cut(s)	112, 642
AccIII	TCCGGA	1 cut(s)	1574
AciI	CCGC	6 cut(s)	112, 274, 343, 532, 640, 1436
AclWI	GGATC	1 cut(s)	551
AcsI	RAATTY	3 cut(s)	181, 1279, 1315
AcuI	CTGAAG	1 cut(s)	285
AdeI	CACNNNGTG	2 cut(s)	254, 1202
AfaI	GTAC	3 cut(s)	19, 1050, 1260
AfiI	CCNNNNNNNGG	6 cut(s)	287, 373, 809, 815, 942, 1831
AgeI	ACCGGT	2 cut(s)	1045, 1151
AgsI	TTSAA	7 cut(s)	445, 855, 1140, 1218, 1383, 1945, 2051
AhdI	GACNNNNNGTC	1 cut(s)	1858
AjnI	CCWGG	5 cut(s)	808, 1000, 1342, 1509, 1587
AjuI	GAANNNNNNNTTGG	4 cut(s)	397, 429, 1878, 1910
AloI	GAACNNNNNNTCC	2 cut(s)	1120, 1152
AluBI	AGCT	5 cut(s)	323, 425, 1143, 1580, 1758
AluI	AGCT	5 cut(s)	323, 425, 1143, 1580, 1758
Alw26I	GTCTC	6 cut(s)	1031, 1627, 1742, 1834, 1976, 1982
AlwI	GGATC	1 cut(s)	551
AlwNI	CAGNNNCTG	3 cut(s)	436, 1268, 1400
Aor13HI	TCCGGA	1 cut(s)	1574
AoxI	GGCC	2 cut(s)	737, 1372
ApeKI	GCWGC	8 cut(s)	77, 422, 575, 962, 991, 1515, 1580, 1679
ApoI	RAATTY	3 cut(s)	181, 1279, 1315
AsiGI	ACCGGT	2 cut(s)	1045, 1151
Asp700I	GAANNNNTTC	1 cut(s)	1464
AspLEI	GCGC	4 cut(s)	348, 1114, 1671, 1893
AspS9I	GGNCC	2 cut(s)	1368, 1373
AsuC2I	CCSGG	2 cut(s)	618, 1366
AsuHPI	GGTGA	9 cut(s)	144, 239, 266, 329, 482, 511, 990, 1412, 1598
AvaII	GGWCC	1 cut(s)	1368
BaeGI	GKGCMC	1 cut(s)	2114
BbsI	GAAGAC	2 cut(s)	678, 998
BbvI	GCAGC	8 cut(s)	64, 434, 562, 949, 1003, 1527, 1567, 1666
BccI	CCATC	6 cut(s)	210, 285, 602, 793, 919, 1637
BcgI	CGANNNNNNTGC	2 cut(s)	1427, 1461
BciT130I	CCWGG	5 cut(s)	810, 1002, 1344, 1511, 1589
BclI	TGATCA	1 cut(s)	1018
BcnI	CCSGG	2 cut(s)	618, 1366
BcoDI	GTCTC	6 cut(s)	1031, 1627, 1742, 1834, 1976, 1982
BfaI	CTAG	9 cut(s)	44, 234, 240, 942, 966, 975, 1052, 1287, 1844
BfmI	CTRYAG	2 cut(s)	120, 2127
BfoI	RGCGCY	1 cut(s)	349
BfuAI	ACCTGC	4 cut(s)	440, 806, 1041, 1289
Bme1390I	CCNGG	7 cut(s)	618, 810, 1002, 1344, 1366, 1511, 1589
Bme18I	GGWCC	1 cut(s)	1368
BmeRI	GACNNNNNGTC	1 cut(s)	1858
BmgT120I	GGNCC	2 cut(s)	1368, 1373
BmiI	GGNNCC	4 cut(s)	28, 1416, 1508, 1995
BmrFI	CCNGG	7 cut(s)	618, 810, 1002, 1344, 1366, 1511, 1589
BmsI	GCATC	9 cut(s)	64, 298, 409, 442, 1180, 1628, 1785, 1979, 2088
BpiI	GAAGAC	2 cut(s)	678, 998
BpmI	CTGGAG	1 cut(s)	831
Bpu10I	CCTNAGC	1 cut(s)	223
BpuEI	CTTGAG	3 cut(s)	934, 1129, 1959
BpuMI	CCSGG	2 cut(s)	618, 1366
BsaBI	GATNNNNATC	1 cut(s)	295
BsaI	GGTCTC	1 cut(s)	1742
BsaJI	CCNNGG	6 cut(s)	55, 1510, 1588, 1610, 1965, 2133
BsaWI	WCCGGW	3 cut(s)	1045, 1151, 1574
Bsc4I	CCNNNNNNNGG	6 cut(s)	287, 373, 809, 815, 942, 1831
Bse118I	RCCGGY	4 cut(s)	1045, 1151, 1370, 1824
Bse1I	ACTGG	9 cut(s)	378, 463, 550, 589, 1013, 1079, 1308, 1789, 1915
Bse3DI	GCAATG	3 cut(s)	1097, 1664, 1732
Bse8I	GATNNNNATC	1 cut(s)	295
BseAI	TCCGGA	1 cut(s)	1574
BseBI	CCWGG	5 cut(s)	810, 1002, 1344, 1511, 1589
BseDI	CCNNGG	6 cut(s)	55, 1510, 1588, 1610, 1965, 2133
BseJI	GATNNNNATC	1 cut(s)	295
BseLI	CCNNNNNNNGG	6 cut(s)	287, 373, 809, 815, 942, 1831
BseMI	GCAATG	3 cut(s)	1097, 1664, 1732
BseMII	CTCAG	3 cut(s)	320, 885, 1704
BseNI	ACTGG	9 cut(s)	378, 463, 550, 589, 1013, 1079, 1308, 1789, 1915
BseRI	GAGGAG	2 cut(s)	353, 1883
BseSI	GKGCMC	1 cut(s)	2114
BseXI	GCAGC	8 cut(s)	64, 434, 562, 949, 1003, 1527, 1567, 1666
Bsh1236I	CGCG	2 cut(s)	112, 642
BshFI	GGCC	2 cut(s)	739, 1374
BshTI	ACCGGT	2 cut(s)	1045, 1151
BsiSI	CCGG	7 cut(s)	618, 1046, 1152, 1366, 1371, 1575, 1825
BslFI	GGGAC	4 cut(s)	684, 731, 1076, 1196
BslI	CCNNNNNNNGG	6 cut(s)	287, 373, 809, 815, 942, 1831
BsmAI	GTCTC	6 cut(s)	1031, 1627, 1742, 1834, 1976, 1982
BsmBI	CGTCTC	2 cut(s)	1976, 1982
BsmFI	GGGAC	4 cut(s)	684, 731, 1076, 1196
BsmI	GAATGC	6 cut(s)	451, 843, 970, 994, 1567, 2049
BsnI	GGCC	2 cut(s)	739, 1374
Bso31I	GGTCTC	1 cut(s)	1742
Bsp1286I	GDGCHC	1 cut(s)	2114
Bsp13I	TCCGGA	1 cut(s)	1574
Bsp143I	GATC	5 cut(s)	85, 556, 1018, 1472, 2035
Bsp19I	CCATGG	1 cut(s)	55
BspACI	CCGC	6 cut(s)	112, 274, 343, 532, 640, 1436
BspANI	GGCC	2 cut(s)	739, 1374
BspCNI	CTCAG	3 cut(s)	321, 884, 1705
BspEI	TCCGGA	1 cut(s)	1574
BspFNI	CGCG	2 cut(s)	112, 642
BspHI	TCATGA	1 cut(s)	1819
BspLI	GGNNCC	4 cut(s)	28, 1416, 1508, 1995
BspMI	ACCTGC	4 cut(s)	440, 806, 1041, 1289
BspPI	GGATC	1 cut(s)	551
BspQI	GCTCTTC	1 cut(s)	1881
BspTNI	GGTCTC	1 cut(s)	1742
BsrBI	CCGCTC	3 cut(s)	274, 343, 532
BsrDI	GCAATG	3 cut(s)	1097, 1664, 1732
BsrFI	RCCGGY	4 cut(s)	1045, 1151, 1370, 1824
BsrI	ACTGG	9 cut(s)	378, 463, 550, 589, 1013, 1079, 1308, 1789, 1915
BssAI	RCCGGY	4 cut(s)	1045, 1151, 1370, 1824
BssECI	CCNNGG	6 cut(s)	55, 1510, 1588, 1610, 1965, 2133
BssMI	GATC	5 cut(s)	85, 556, 1018, 1472, 2035
BssT1I	CCWWGG	3 cut(s)	55, 1610, 2133
Bst2UI	CCWGG	5 cut(s)	810, 1002, 1344, 1511, 1589
Bst4CI	ACNGT	2 cut(s)	684, 1133
Bst6I	CTCTTC	2 cut(s)	859, 1881
BstAPI	GCANNNNNTGC	1 cut(s)	219
BstC8I	GCNNGC	3 cut(s)	110, 766, 1226
BstDEI	CTNAG	5 cut(s)	208, 223, 329, 871, 1713
BstDSI	CCRYGG	1 cut(s)	55
BstENI	CCTNNNNNAGG	2 cut(s)	813, 940
BstFNI	CGCG	2 cut(s)	112, 642
BstH2I	RGCGCY	1 cut(s)	349
BstHHI	GCGC	4 cut(s)	348, 1114, 1671, 1893
BstKTI	GATC	5 cut(s)	88, 559, 1021, 1475, 2038
BstMAI	GTCTC	6 cut(s)	1031, 1627, 1742, 1834, 1976, 1982
BstMBI	GATC	5 cut(s)	85, 556, 1018, 1472, 2035
BstMWI	GCNNNNNNNGC	5 cut(s)	40, 105, 219, 648, 1976
BstNI	CCWGG	5 cut(s)	810, 1002, 1344, 1511, 1589
BstNSI	RCATGY	1 cut(s)	1228
BstSCI	CCNGG	7 cut(s)	616, 808, 1000, 1342, 1364, 1509, 1587
BstSFI	CTRYAG	2 cut(s)	120, 2127
BstSLI	GKGCMC	1 cut(s)	2114
BstUI	CGCG	2 cut(s)	112, 642
BstV1I	GCAGC	8 cut(s)	64, 434, 562, 949, 1003, 1527, 1567, 1666
BstV2I	GAAGAC	2 cut(s)	678, 998
BsuRI	GGCC	2 cut(s)	739, 1374
BtgI	CCRYGG	1 cut(s)	55
BtsIMutI	CAGTG	5 cut(s)	309, 371, 456, 1138, 1908
BveI	ACCTGC	4 cut(s)	440, 806, 1041, 1289
Cac8I	GCNNGC	3 cut(s)	110, 766, 1226
CaiI	CAGNNNCTG	3 cut(s)	436, 1268, 1400
CciI	TCATGA	1 cut(s)	1819
CfoI	GCGC	4 cut(s)	348, 1114, 1671, 1893
Cfr10I	RCCGGY	4 cut(s)	1045, 1151, 1370, 1824
Cfr13I	GGNCC	2 cut(s)	1368, 1373
CpoI	CGGWCCG	1 cut(s)	1368
CseI	GACGC	2 cut(s)	1386, 2104
CsiI	ACCWGGT	1 cut(s)	1000
Csp6I	GTAC	3 cut(s)	18, 1049, 1259
CspAI	ACCGGT	2 cut(s)	1045, 1151
CspI	CGGWCCG	1 cut(s)	1368
CviQI	GTAC	3 cut(s)	18, 1049, 1259
DdeI	CTNAG	5 cut(s)	208, 223, 329, 871, 1713
DpnI	GATC	5 cut(s)	87, 558, 1020, 1474, 2037
DpnII	GATC	5 cut(s)	85, 556, 1018, 1472, 2035
DraIII	CACNNNGTG	2 cut(s)	254, 1202
DriI	GACNNNNNGTC	1 cut(s)	1858
Eam1104I	CTCTTC	2 cut(s)	859, 1881
Eam1105I	GACNNNNNGTC	1 cut(s)	1858
EarI	CTCTTC	2 cut(s)	859, 1881
Eco130I	CCWWGG	3 cut(s)	55, 1610, 2133
Eco147I	AGGCCT	1 cut(s)	739
Eco31I	GGTCTC	1 cut(s)	1742
Eco47I	GGWCC	1 cut(s)	1368
Eco57I	CTGAAG	1 cut(s)	285
EcoNI	CCTNNNNNAGG	2 cut(s)	813, 940
EcoRI	GAATTC	2 cut(s)	181, 1279
EcoRII	CCWGG	5 cut(s)	808, 1000, 1342, 1509, 1587
EcoT14I	CCWWGG	3 cut(s)	55, 1610, 2133
ErhI	CCWWGG	3 cut(s)	55, 1610, 2133
Esp3I	CGTCTC	2 cut(s)	1976, 1982
FaqI	GGGAC	4 cut(s)	684, 731, 1076, 1196
FbaI	TGATCA	1 cut(s)	1018
FspBI	CTAG	9 cut(s)	44, 234, 240, 942, 966, 975, 1052, 1287, 1844
FspI	TGCGCA	2 cut(s)	1113, 1670
GlaI	GCGC	4 cut(s)	347, 1113, 1670, 1892
GsuI	CTGGAG	1 cut(s)	831
HaeII	RGCGCY	1 cut(s)	349
HaeIII	GGCC	2 cut(s)	739, 1374
HapII	CCGG	7 cut(s)	618, 1046, 1152, 1366, 1371, 1575, 1825
HgaI	GACGC	2 cut(s)	1386, 2104
HhaI	GCGC	4 cut(s)	348, 1114, 1671, 1893
Hin6I	GCGC	4 cut(s)	346, 1112, 1669, 1891
HinP1I	GCGC	4 cut(s)	346, 1112, 1669, 1891
HincII	GTYRAC	1 cut(s)	1852
HindII	GTYRAC	1 cut(s)	1852
HinfI	GANTC	8 cut(s)	115, 133, 535, 851, 1499, 1780, 1936, 2104
HpaII	CCGG	7 cut(s)	618, 1046, 1152, 1366, 1371, 1575, 1825
HphI	GGTGA	9 cut(s)	144, 239, 266, 329, 482, 511, 990, 1412, 1598
Hpy166II	GTNNAC	4 cut(s)	197, 1067, 1852, 1906
Hpy8I	GTNNAC	4 cut(s)	197, 1067, 1852, 1906
Hpy99I	CGWCG	2 cut(s)	70, 1473
HpyAV	CCTTC	4 cut(s)	750, 1685, 1740, 2021
HpyCH4III	ACNGT	2 cut(s)	684, 1133
HpyCH4IV	ACGT	2 cut(s)	65, 199
HpyF10VI	GCNNNNNNNGC	5 cut(s)	40, 105, 219, 648, 1976
HpyF3I	CTNAG	5 cut(s)	208, 223, 329, 871, 1713
HpySE526I	ACGT	2 cut(s)	65, 199
HspAI	GCGC	4 cut(s)	346, 1112, 1669, 1891
Kpn2I	TCCGGA	1 cut(s)	1574
Ksp22I	TGATCA	1 cut(s)	1018
Kzo9I	GATC	5 cut(s)	85, 556, 1018, 1472, 2035
LguI	GCTCTTC	1 cut(s)	1881
LmnI	GCTCC	6 cut(s)	340, 812, 1198, 1408, 1577, 1993
Lsp1109I	GCAGC	8 cut(s)	64, 434, 562, 949, 1003, 1527, 1567, 1666
LweI	GCATC	9 cut(s)	64, 298, 409, 442, 1180, 1628, 1785, 1979, 2088
MabI	ACCWGGT	1 cut(s)	1000
MaeI	CTAG	9 cut(s)	44, 234, 240, 942, 966, 975, 1052, 1287, 1844
MaeII	ACGT	2 cut(s)	65, 199
MaeIII	GTNAC	2 cut(s)	517, 707
MalI	GATC	5 cut(s)	87, 558, 1020, 1474, 2037
MbiI	CCGCTC	3 cut(s)	274, 343, 532
MboI	GATC	5 cut(s)	85, 556, 1018, 1472, 2035
MhlI	GDGCHC	1 cut(s)	2114
MluCI	AATT	9 cut(s)	181, 412, 550, 1271, 1279, 1315, 1426, 1439, 1926
MlyI	GAGTC	2 cut(s)	529, 1508
MmeI	TCCRAC	3 cut(s)	110, 841, 1608
MroI	TCCGGA	1 cut(s)	1574
MroXI	GAANNNNTTC	1 cut(s)	1464
MseI	TTAA	2 cut(s)	692, 1319
MslI	CAYNNNNRTG	4 cut(s)	468, 759, 975, 1641
MspI	CCGG	7 cut(s)	618, 1046, 1152, 1366, 1371, 1575, 1825
MspR9I	CCNGG	7 cut(s)	618, 810, 1002, 1344, 1366, 1511, 1589
Mva1269I	GAATGC	6 cut(s)	451, 843, 970, 994, 1567, 2049
MvaI	CCWGG	5 cut(s)	810, 1002, 1344, 1511, 1589
MvnI	CGCG	2 cut(s)	112, 642
MwoI	GCNNNNNNNGC	5 cut(s)	40, 105, 219, 648, 1976
NciI	CCSGG	2 cut(s)	618, 1366
NcoI	CCATGG	1 cut(s)	55
NdeII	GATC	5 cut(s)	85, 556, 1018, 1472, 2035
NlaIV	GGNNCC	4 cut(s)	28, 1416, 1508, 1995
NmeAIII	GCCGAG	1 cut(s)	1990
NmuCI	GTSAC	1 cut(s)	517
NsbI	TGCGCA	2 cut(s)	1113, 1670
NspI	RCATGY	1 cut(s)	1228
PaeI	GCATGC	1 cut(s)	1228
PagI	TCATGA	1 cut(s)	1819
PaqCI	CACCTGC	1 cut(s)	806
PceI	AGGCCT	1 cut(s)	739
PciSI	GCTCTTC	1 cut(s)	1881
PctI	GAATGC	6 cut(s)	451, 843, 970, 994, 1567, 2049
PdmI	GAANNNNTTC	1 cut(s)	1464
PfeI	GAWTC	6 cut(s)	115, 133, 851, 1780, 1936, 2104
PflMI	CCANNNNNTGG	2 cut(s)	287, 809
PfoI	TCCNGGA	2 cut(s)	1342, 1364
PinAI	ACCGGT	2 cut(s)	1045, 1151
PleI	GAGTC	2 cut(s)	529, 1507
PpsI	GAGTC	2 cut(s)	529, 1507
Psp6I	CCWGG	5 cut(s)	808, 1000, 1342, 1509, 1587
PspGI	CCWGG	5 cut(s)	808, 1000, 1342, 1509, 1587
PspN4I	GGNNCC	4 cut(s)	28, 1416, 1508, 1995
PspPI	GGNCC	2 cut(s)	1368, 1373
PsrI	GAACNNNNNNTAC	2 cut(s)	10, 42
PstNI	CAGNNNCTG	3 cut(s)	436, 1268, 1400
RsaI	GTAC	3 cut(s)	19, 1050, 1260
RsaNI	GTAC	3 cut(s)	18, 1049, 1259
RseI	CAYNNNNRTG	4 cut(s)	468, 759, 975, 1641
Rsr2I	CGGWCCG	1 cut(s)	1368
RsrII	CGGWCCG	1 cut(s)	1368
SapI	GCTCTTC	1 cut(s)	1881
SaqAI	TTAA	2 cut(s)	692, 1319
Sau3AI	GATC	5 cut(s)	85, 556, 1018, 1472, 2035
Sau96I	GGNCC	2 cut(s)	1368, 1373
SchI	GAGTC	2 cut(s)	529, 1508
ScrFI	CCNGG	7 cut(s)	618, 810, 1002, 1344, 1366, 1511, 1589
SduI	GDGCHC	1 cut(s)	2114
SexAI	ACCWGGT	1 cut(s)	1000
SfaNI	GCATC	9 cut(s)	64, 298, 409, 442, 1180, 1628, 1785, 1979, 2088
SfcI	CTRYAG	2 cut(s)	120, 2127
SinI	GGWCC	1 cut(s)	1368
SmiMI	CAYNNNNRTG	4 cut(s)	468, 759, 975, 1641
SmlI	CTYRAG	3 cut(s)	949, 1144, 1974
SmoI	CTYRAG	3 cut(s)	949, 1144, 1974
SphI	GCATGC	1 cut(s)	1228
Sse9I	AATT	9 cut(s)	181, 412, 550, 1271, 1279, 1315, 1426, 1439, 1926
SseBI	AGGCCT	1 cut(s)	739
SsiI	CCGC	6 cut(s)	112, 274, 343, 532, 640, 1436
SspMI	CTAG	9 cut(s)	44, 234, 240, 942, 966, 975, 1052, 1287, 1844
StuI	AGGCCT	1 cut(s)	739
StyD4I	CCNGG	7 cut(s)	616, 808, 1000, 1342, 1364, 1509, 1587
StyI	CCWWGG	3 cut(s)	55, 1610, 2133
TaaI	ACNGT	2 cut(s)	684, 1133
TaiI	ACGT	2 cut(s)	68, 202
TaqI	TCGA	7 cut(s)	68, 1029, 1447, 1471, 1767, 1793, 1934
TasI	AATT	9 cut(s)	181, 412, 550, 1271, 1279, 1315, 1426, 1439, 1926
TauI	GCSGC	2 cut(s)	346, 642
TfiI	GAWTC	6 cut(s)	115, 133, 851, 1780, 1936, 2104
Tru1I	TTAA	2 cut(s)	692, 1319
Tru9I	TTAA	2 cut(s)	692, 1319
TscAI	CASTG	5 cut(s)	309, 378, 463, 1138, 1915
TseFI	GTSAC	1 cut(s)	517
TseI	GCWGC	8 cut(s)	77, 422, 575, 962, 991, 1515, 1580, 1679
Tsp45I	GTSAC	1 cut(s)	517
TspDTI	ATGAA	9 cut(s)	179, 366, 615, 1293, 1536, 1560, 1653, 1808, 2040
TspGWI	ACGGA	2 cut(s)	2000, 2006
TspRI	CASTG	5 cut(s)	309, 378, 463, 1138, 1915
Van91I	CCANNNNNTGG	2 cut(s)	287, 809
VpaK11BI	GGWCC	1 cut(s)	1368
XagI	CCTNNNNNAGG	2 cut(s)	813, 940
XapI	RAATTY	3 cut(s)	181, 1279, 1315
XbaI	TCTAGA	1 cut(s)	239
XceI	RCATGY	1 cut(s)	1228
XcmI	CCANNNNNNNNNTGG	1 cut(s)	288
XmnI	GAANNNNTTC	1 cut(s)	1464
XspI	CTAG	9 cut(s)	44, 234, 240, 942, 966, 975, 1052, 1287, 1844

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.