Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0011455

Physical Location & Seq

Genomic Coordinates Reverse (-)

37300703 .. 37303462

Gene Structure 2760 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G438300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1083 bp

ATGGAGATGAACGATGGCGATAACGAAGAGTTTGGGTTGTCCAGAAATTACTTTCTGGCAAAGGAGCTCCGTGGCTCCGGCAAGAGATCTCATTCTAAGCTCTCTGATATTGACGTCGTTGACGAACAGGAACTGATTGCAGCAGTATCTAAAATCGAACCAAAACATGAGAAAGAGGTCAAGGAATTGATGAACAGTTATAAAAGTTCGTACCCTGAATGGGCTTTTGAGCTAAGATGTGGTCTTGGCCTTCTTATGTATGGATTTGGATCGAAGAAGGCCTTGCTTGAAGATTTTGCTTCAACATCATTGACCGAGTATTCTGTGGTTGTTGTCAATGGATATCTTCCAGGAATAAATATAAAACAGGTTGTGGCAGCCTTAGCTGAACTTCTGTGGGATCAACTGAAATCCAAAAGAAAGAATCCTGGGAGCTCTTCCAAAGTTCAACAGCCATTTAGTTCTAGATCCATGGATGATCTTCTTGCATTTTTGGATGAGGAAAGGAAAAACGAATGTTTTGTATGCGTTGTCATTCATAACATCGATGGGCCTGGATTAAGGGACTCTGAAACCCAACAAATTCTTGCACGAGTTGCTTCTTGTTCCCATATTCGCATGGTGGCCTCTATCGATCATGTGAATGCACCTCTTTTGTGGGACAAGAAGATGGTTCACACACAGTTCAACTGGTGCTGGCATCATGTTCCTACCTTTGCACCATACAAGATTGAAGGAATGCTCATTCCCCTGATTCTTGCGCATGGAAACACCACCCAAAGTGCCAAAAGTGCTACAATAGTTTTGCAGAGTTTGACATCCAATGCCCAGAGTGTGTTCAAAGTTCTTGCAGAATATCAACTATCTCATTCTAATGAAGAAGGTATGCCCGTTGATAATCTGTATGCAAGCTGTCGAGAGCGCTTCCTAGTGAGCAGCCAGCTTACGCTTAACTCCCATTTGACAGAATTCAAAGATCATGAGTTGGTCAAGACCAAAAGGAATTCTGATGGCCAGGATTGTTTGCACGTCCCTCTCACAAATGAGGCACTTGAAAAACTCATAGCGGAGCTTAGTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000808 GO:0003674 GO:0003676 GO:0003677 GO:0003688 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005664 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1901576 GO:1990837

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 map04110 map04111 map04113

Pfam Domains

Protein Families

ORC2

Protein Analysis

361

Amino Acids

40.49

Weight (kDa)

5.83

Isoelectric Point (pI)

49.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011455)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37560 AT2G37560
fragaria_vesca	FvH4_2g34610
malus_domestica	MD08G1103300.v1.1 MD15G1084600.v1.1
prunus_persica	Prupe.1G438300_v2.0.a1 Prupe.1G438300_v2.0.a1
pyrus_communis	pycom08g08470 pycom15g07990
rosa_chinensis	RchiOBHm_Chr6g0307531 RchiOBHm_Chr6g0307691
rosa_laevigata	RLG00000010708
rosa_multiflora	Rmu_sc0000031.1_g000024
rosa_roxburghii	Rroxscaffold_7G00160960
rosa_rugosa	Rorug06G0359500
rosa_samantha	Rh6AG469000 Rh6BG479600 Rh6CG485100 Rh6DG471800
rosa_wichuraiana	Rw6G040950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	201
AatII	GACGTC	1 cut(s)	117
Acc16I	TGCGCA	1 cut(s)	762
AciI	CCGC	1 cut(s)	1067
AclWI	GGATC	3 cut(s)	277, 408, 462
AcoI	YGGCCR	1 cut(s)	1012
AcsI	RAATTY	3 cut(s)	582, 968, 1003
AcyI	GRCGYC	1 cut(s)	114
AfaI	GTAC	1 cut(s)	212
AfeI	AGCGCT	1 cut(s)	923
AfiI	CCNNNNNNNGG	1 cut(s)	220
AgsI	TTSAA	8 cut(s)	290, 303, 449, 688, 734, 841, 973, 1055
AjiI	CACGTC	1 cut(s)	1030
AjnI	CCWGG	4 cut(s)	349, 427, 553, 1014
AluBI	AGCT	8 cut(s)	67, 100, 232, 386, 435, 912, 943, 1072
AluI	AGCT	8 cut(s)	67, 100, 232, 386, 435, 912, 943, 1072
Alw21I	GWGCWC	2 cut(s)	69, 437
AlwI	GGATC	3 cut(s)	277, 408, 462
AlwNI	CAGNNNCTG	1 cut(s)	133
Aor51HI	AGCGCT	1 cut(s)	923
AoxI	GGCC	5 cut(s)	247, 279, 551, 624, 1012
ApeKI	GCWGC	3 cut(s)	140, 377, 936
ApoI	RAATTY	3 cut(s)	582, 968, 1003
AspLEI	GCGC	2 cut(s)	763, 924
AspS9I	GGNCC	1 cut(s)	551
BalI	TGGCCA	1 cut(s)	1014
BanII	GRGCYC	2 cut(s)	69, 437
BauI	CACGAG	1 cut(s)	591
Bbv12I	GWGCWC	2 cut(s)	69, 437
BbvI	GCAGC	3 cut(s)	152, 389, 948
BccI	CCATC	4 cut(s)	8, 542, 664, 1004
BciT130I	CCWGG	4 cut(s)	351, 429, 555, 1016
BfaI	CTAG	2 cut(s)	465, 929
BfoI	RGCGCY	1 cut(s)	925
BglII	AGATCT	1 cut(s)	86
BisI	GCNGC	3 cut(s)	141, 378, 937
BlsI	GCNGC	3 cut(s)	142, 379, 938
Bme1390I	CCNGG	4 cut(s)	351, 429, 555, 1016
BmgBI	CACGTC	1 cut(s)	1030
BmgT120I	GGNCC	1 cut(s)	551
BmiI	GGNNCC	1 cut(s)	76
BmrFI	CCNGG	4 cut(s)	351, 429, 555, 1016
BmsI	GCATC	1 cut(s)	709
Bpu10I	CCTNAGC	1 cut(s)	382
Bsa29I	ATCGAT	2 cut(s)	546, 633
BsaBI	GATNNNNATC	1 cut(s)	268
BsaHI	GRCGYC	1 cut(s)	114
BsaJI	CCNNGG	3 cut(s)	70, 428, 471
Bsc4I	CCNNNNNNNGG	1 cut(s)	220
Bse1I	ACTGG	1 cut(s)	695
Bse8I	GATNNNNATC	1 cut(s)	268
BseBI	CCWGG	4 cut(s)	351, 429, 555, 1016
BseCI	ATCGAT	2 cut(s)	546, 633
BseDI	CCNNGG	3 cut(s)	70, 428, 471
BseGI	GGATG	3 cut(s)	481, 502, 818
BseJI	GATNNNNATC	1 cut(s)	268
BseLI	CCNNNNNNNGG	1 cut(s)	220
BseNI	ACTGG	1 cut(s)	695
BseXI	GCAGC	3 cut(s)	152, 389, 948
BshFI	GGCC	5 cut(s)	249, 281, 553, 626, 1014
BshVI	ATCGAT	2 cut(s)	546, 633
BsiHKAI	GWGCWC	2 cut(s)	69, 437
BsiSI	CCGG	1 cut(s)	78
BslFI	GGGAC	3 cut(s)	578, 674, 1016
BslI	CCNNNNNNNGG	1 cut(s)	220
BsmFI	GGGAC	3 cut(s)	578, 674, 1016
BsmI	GAATGC	2 cut(s)	649, 744
BsnI	GGCC	5 cut(s)	249, 281, 553, 626, 1014
Bsp1286I	GDGCHC	2 cut(s)	69, 437
Bsp143I	GATC	7 cut(s)	86, 269, 400, 467, 478, 634, 976
Bsp19I	CCATGG	1 cut(s)	471
BspACI	CCGC	1 cut(s)	1067
BspANI	GGCC	5 cut(s)	249, 281, 553, 626, 1014
BspDI	ATCGAT	2 cut(s)	546, 633
BspHI	TCATGA	1 cut(s)	979
BspLI	GGNNCC	1 cut(s)	76
BspPI	GGATC	3 cut(s)	277, 408, 462
BspQI	GCTCTTC	1 cut(s)	442
BsrI	ACTGG	1 cut(s)	695
BssECI	CCNNGG	3 cut(s)	70, 428, 471
BssMI	GATC	7 cut(s)	86, 269, 400, 467, 478, 634, 976
BssNI	GRCGYC	1 cut(s)	114
BssSI	CACGAG	1 cut(s)	591
BssT1I	CCWWGG	1 cut(s)	471
Bst2BI	CACGAG	1 cut(s)	591
Bst2UI	CCWGG	4 cut(s)	351, 429, 555, 1016
Bst4CI	ACNGT	2 cut(s)	197, 684
Bst6I	CTCTTC	2 cut(s)	21, 442
BstACI	GRCGYC	1 cut(s)	114
BstAPI	GCANNNNNTGC	1 cut(s)	596
BstC8I	GCNNGC	3 cut(s)	698, 910, 941
BstDEI	CTNAG	4 cut(s)	96, 233, 382, 1073
BstDSI	CCRYGG	2 cut(s)	70, 471
BstF5I	GGATG	3 cut(s)	481, 502, 818
BstH2I	RGCGCY	1 cut(s)	925
BstHHI	GCGC	2 cut(s)	763, 924
BstKTI	GATC	7 cut(s)	89, 272, 403, 470, 481, 637, 979
BstMBI	GATC	7 cut(s)	86, 269, 400, 467, 478, 634, 976
BstMWI	GCNNNNNNNGC	3 cut(s)	383, 596, 791
BstNI	CCWGG	4 cut(s)	351, 429, 555, 1016
BstSCI	CCNGG	4 cut(s)	349, 427, 553, 1014
BstV1I	GCAGC	3 cut(s)	152, 389, 948
BstX2I	RGATCY	2 cut(s)	86, 467
BstYI	RGATCY	2 cut(s)	86, 467
Bsu15I	ATCGAT	2 cut(s)	546, 633
BsuRI	GGCC	5 cut(s)	249, 281, 553, 626, 1014
BsuTUI	ATCGAT	2 cut(s)	546, 633
BtgI	CCRYGG	2 cut(s)	70, 471
BtrI	CACGTC	1 cut(s)	1030
BtsCI	GGATG	3 cut(s)	481, 502, 818
Cac8I	GCNNGC	3 cut(s)	698, 910, 941
CaiI	CAGNNNCTG	1 cut(s)	133
CciI	TCATGA	1 cut(s)	979
CfoI	GCGC	2 cut(s)	763, 924
Cfr13I	GGNCC	1 cut(s)	551
ClaI	ATCGAT	2 cut(s)	546, 633
Csp6I	GTAC	1 cut(s)	211
CviAII	CATG	7 cut(s)	167, 472, 619, 638, 704, 764, 980
CviQI	GTAC	1 cut(s)	211
DdeI	CTNAG	4 cut(s)	96, 233, 382, 1073
DpnI	GATC	7 cut(s)	88, 271, 402, 469, 480, 636, 978
DpnII	GATC	7 cut(s)	86, 269, 400, 467, 478, 634, 976
EaeI	YGGCCR	1 cut(s)	1012
Eam1104I	CTCTTC	2 cut(s)	21, 442
EarI	CTCTTC	2 cut(s)	21, 442
Ecl136II	GAGCTC	2 cut(s)	67, 435
Eco130I	CCWWGG	1 cut(s)	471
Eco147I	AGGCCT	1 cut(s)	281
Eco24I	GRGCYC	2 cut(s)	69, 437
Eco32I	GATATC	1 cut(s)	344
Eco47III	AGCGCT	1 cut(s)	923
Eco53kI	GAGCTC	2 cut(s)	67, 435
EcoICRI	GAGCTC	2 cut(s)	67, 435
EcoRI	GAATTC	2 cut(s)	968, 1003
EcoRII	CCWGG	4 cut(s)	349, 427, 553, 1014
EcoRV	GATATC	1 cut(s)	344
EcoT14I	CCWWGG	1 cut(s)	471
EcoT38I	GRGCYC	2 cut(s)	69, 437
ErhI	CCWWGG	1 cut(s)	471
FaeI	CATG	7 cut(s)	170, 475, 622, 641, 707, 767, 983
FalI	AAGNNNNNCTT	2 cut(s)	266, 298
FaqI	GGGAC	3 cut(s)	578, 674, 1016
FatI	CATG	7 cut(s)	166, 471, 618, 637, 703, 763, 979
Fnu4HI	GCNGC	3 cut(s)	141, 378, 937
FokI	GGATG	3 cut(s)	488, 509, 805
FriOI	GRGCYC	2 cut(s)	69, 437
Fsp4HI	GCNGC	3 cut(s)	141, 378, 937
FspBI	CTAG	2 cut(s)	465, 929
FspI	TGCGCA	1 cut(s)	762
GlaI	GCGC	2 cut(s)	762, 923
GluI	GCNGC	3 cut(s)	141, 378, 937
HaeII	RGCGCY	1 cut(s)	925
HaeIII	GGCC	5 cut(s)	249, 281, 553, 626, 1014
HapII	CCGG	1 cut(s)	78
HhaI	GCGC	2 cut(s)	763, 924
Hin1I	GRCGYC	1 cut(s)	114
Hin1II	CATG	7 cut(s)	170, 475, 622, 641, 707, 767, 983
Hin6I	GCGC	2 cut(s)	761, 922
HinP1I	GCGC	2 cut(s)	761, 922
HincII	GTYRAC	1 cut(s)	121
HindII	GTYRAC	1 cut(s)	121
HinfI	GANTC	3 cut(s)	424, 566, 754
HpaII	CCGG	1 cut(s)	78
Hpy166II	GTNNAC	2 cut(s)	121, 676
Hpy188I	TCNGA	3 cut(s)	106, 571, 1009
Hpy188III	TCNNGA	5 cut(s)	42, 465, 917, 980, 991
Hpy8I	GTNNAC	2 cut(s)	121, 676
Hpy99I	CGWCG	1 cut(s)	119
HpyAV	CCTTC	4 cut(s)	260, 271, 728, 875
HpyCH4III	ACNGT	2 cut(s)	197, 684
HpyCH4IV	ACGT	2 cut(s)	114, 1029
HpyCH4V	TGCA	9 cut(s)	140, 488, 590, 647, 719, 808, 851, 908, 1027
HpyF10VI	GCNNNNNNNGC	3 cut(s)	383, 596, 791
HpyF3I	CTNAG	4 cut(s)	96, 233, 382, 1073
HpySE526I	ACGT	2 cut(s)	114, 1029
Hsp92I	GRCGYC	1 cut(s)	114
Hsp92II	CATG	7 cut(s)	170, 475, 622, 641, 707, 767, 983
HspAI	GCGC	2 cut(s)	761, 922
Kzo9I	GATC	7 cut(s)	86, 269, 400, 467, 478, 634, 976
LguI	GCTCTTC	1 cut(s)	442
LmnI	GCTCC	5 cut(s)	64, 72, 80, 432, 1069
Lsp1109I	GCAGC	3 cut(s)	152, 389, 948
LweI	GCATC	1 cut(s)	709
MaeI	CTAG	2 cut(s)	465, 929
MaeII	ACGT	2 cut(s)	114, 1029
MalI	GATC	7 cut(s)	88, 271, 402, 469, 480, 636, 978
MboI	GATC	7 cut(s)	86, 269, 400, 467, 478, 634, 976
MboII	GAAGA	8 cut(s)	38, 286, 302, 338, 429, 473, 679, 890
MflI	RGATCY	2 cut(s)	86, 467
MhlI	GDGCHC	2 cut(s)	69, 437
MlsI	TGGCCA	1 cut(s)	1014
MluCI	AATT	5 cut(s)	46, 185, 582, 968, 1003
MluNI	TGGCCA	1 cut(s)	1014
MlyI	GAGTC	1 cut(s)	560
MnlI	CCTC	6 cut(s)	169, 493, 637, 660, 1039, 1044
Mox20I	TGGCCA	1 cut(s)	1014
MscI	TGGCCA	1 cut(s)	1014
MseI	TTAA	2 cut(s)	560, 951
MslI	CAYNNNNRTG	2 cut(s)	642, 873
Msp20I	TGGCCA	1 cut(s)	1014
MspI	CCGG	1 cut(s)	78
MspR9I	CCNGG	4 cut(s)	351, 429, 555, 1016
Mva1269I	GAATGC	2 cut(s)	649, 744
MvaI	CCWGG	4 cut(s)	351, 429, 555, 1016
MwoI	GCNNNNNNNGC	3 cut(s)	383, 596, 791
NcoI	CCATGG	1 cut(s)	471
NdeII	GATC	7 cut(s)	86, 269, 400, 467, 478, 634, 976
NlaIII	CATG	7 cut(s)	170, 475, 622, 641, 707, 767, 983
NlaIV	GGNNCC	1 cut(s)	76
NsbI	TGCGCA	1 cut(s)	762
PagI	TCATGA	1 cut(s)	979
PceI	AGGCCT	1 cut(s)	281
PciSI	GCTCTTC	1 cut(s)	442
PcsI	WCGNNNNNNNCGW	1 cut(s)	120
PctI	GAATGC	2 cut(s)	649, 744
PfeI	GAWTC	2 cut(s)	424, 754
PfoI	TCCNGGA	1 cut(s)	349
PkrI	GCNGC	3 cut(s)	142, 379, 938
PleI	GAGTC	1 cut(s)	560
PpsI	GAGTC	1 cut(s)	560
PsiI	TTATAA	1 cut(s)	201
Psp124BI	GAGCTC	2 cut(s)	69, 437
Psp6I	CCWGG	4 cut(s)	349, 427, 553, 1014
PspGI	CCWGG	4 cut(s)	349, 427, 553, 1014
PspN4I	GGNNCC	1 cut(s)	76
PspPI	GGNCC	1 cut(s)	551
PstNI	CAGNNNCTG	1 cut(s)	133
PsuI	RGATCY	2 cut(s)	86, 467
RsaI	GTAC	1 cut(s)	212
RsaNI	GTAC	1 cut(s)	211
RseI	CAYNNNNRTG	2 cut(s)	642, 873
SacI	GAGCTC	2 cut(s)	69, 437
SapI	GCTCTTC	1 cut(s)	442
SaqAI	TTAA	2 cut(s)	560, 951
SatI	GCNGC	3 cut(s)	141, 378, 937
Sau3AI	GATC	7 cut(s)	86, 269, 400, 467, 478, 634, 976
Sau96I	GGNCC	1 cut(s)	551
SchI	GAGTC	1 cut(s)	560
ScrFI	CCNGG	4 cut(s)	351, 429, 555, 1016
SduI	GDGCHC	2 cut(s)	69, 437
SfaNI	GCATC	1 cut(s)	709
SmiMI	CAYNNNNRTG	2 cut(s)	642, 873
Sse9I	AATT	5 cut(s)	46, 185, 582, 968, 1003
SseBI	AGGCCT	1 cut(s)	281
SsiI	CCGC	1 cut(s)	1067
SspMI	CTAG	2 cut(s)	465, 929
SstI	GAGCTC	2 cut(s)	69, 437
StuI	AGGCCT	1 cut(s)	281
StyD4I	CCNGG	4 cut(s)	349, 427, 553, 1014
StyI	CCWWGG	1 cut(s)	471
TaaI	ACNGT	2 cut(s)	197, 684
TaiI	ACGT	2 cut(s)	117, 1032
TaqI	TCGA	5 cut(s)	156, 272, 546, 633, 916
TaqII	GACCGA	1 cut(s)	329
TasI	AATT	5 cut(s)	46, 185, 582, 968, 1003
TfiI	GAWTC	2 cut(s)	424, 754
Tru1I	TTAA	2 cut(s)	560, 951
Tru9I	TTAA	2 cut(s)	560, 951
TseI	GCWGC	3 cut(s)	140, 377, 936
TspDTI	ATGAA	4 cut(s)	23, 206, 527, 891
TspGWI	ACGGA	1 cut(s)	59
XapI	RAATTY	3 cut(s)	582, 968, 1003
XbaI	TCTAGA	1 cut(s)	464
XspI	CTAG	2 cut(s)	465, 929
ZraI	GACGTC	1 cut(s)	115

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.