La protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G32720 AT4G32720 |
| fragaria_vesca | FvH4_2g36050 FvH4_2g36050 |
| malus_domestica | MD08G1117800.v1.1 MD15G1097300.v1.1 |
| prunus_persica | Prupe.1G452100_v2.0.a1 |
| pyrus_communis | pycom08g09840 pycom15g08920 |
| rosa_chinensis | RchiOBHm_Chr6g0305801 |
| rosa_laevigata | RLG00000010857 |
| rosa_multiflora | Rmu_sc0001809.1_g000040 Rmu_sc0041759.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00162320 |
| rosa_rugosa | Rorug06G0344000 |
| rosa_samantha | Rh6AG455700 Rh6BG445400 Rh6CG469700 Rh6DG456400 |
| rosa_wichuraiana | Rw6G039760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 285, 325 |
| AccI | GTMKAC | 2 cut(s) | 299, 339 |
| AccII | CGCG | 2 cut(s) | 1308, 1326 |
| AciI | CCGC | 9 cut(s) | 46, 474, 643, 668, 1029, 1251, 1306, 1324, 1326 |
| AclWI | GGATC | 1 cut(s) | 514 |
| AcoI | YGGCCR | 2 cut(s) | 1288, 1372 |
| AcsI | RAATTY | 5 cut(s) | 876, 1088, 1222, 1301, 1421 |
| AcuI | CTGAAG | 6 cut(s) | 49, 234, 332, 789, 999, 1179 |
| AcvI | CACGTG | 1 cut(s) | 1178 |
| AcyI | GRCGYC | 1 cut(s) | 8 |
| AfaI | GTAC | 4 cut(s) | 745, 769, 1106, 1271 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1250, 1381 |
| AgsI | TTSAA | 2 cut(s) | 389, 1072 |
| AjiI | CACGTC | 1 cut(s) | 714 |
| AjnI | CCWGG | 3 cut(s) | 48, 522, 880 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 390, 422 |
| AluBI | AGCT | 6 cut(s) | 138, 268, 356, 385, 725, 1166 |
| AluI | AGCT | 6 cut(s) | 138, 268, 356, 385, 725, 1166 |
| Alw21I | GWGCWC | 2 cut(s) | 45, 713 |
| Alw26I | GTCTC | 1 cut(s) | 554 |
| AlwI | GGATC | 1 cut(s) | 514 |
| Ama87I | CYCGRG | 1 cut(s) | 84 |
| AoxI | GGCC | 2 cut(s) | 1288, 1372 |
| ApeKI | GCWGC | 7 cut(s) | 356, 439, 989, 1025, 1163, 1181, 1184 |
| ApoI | RAATTY | 5 cut(s) | 876, 1088, 1222, 1301, 1421 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 243, 876, 1223 |
| AspA2I | CCTAGG | 1 cut(s) | 1201 |
| AsuC2I | CCSGG | 1 cut(s) | 1417 |
| AsuHPI | GGTGA | 4 cut(s) | 354, 872, 953, 1265 |
| AsuII | TTCGAA | 3 cut(s) | 32, 247, 1149 |
| AvaI | CYCGRG | 1 cut(s) | 84 |
| AvrII | CCTAGG | 1 cut(s) | 1201 |
| AxyI | CCTNAGG | 1 cut(s) | 678 |
| BalI | TGGCCA | 1 cut(s) | 1290 |
| BbrPI | CACGTG | 1 cut(s) | 1178 |
| BbsI | GAAGAC | 1 cut(s) | 282 |
| Bbv12I | GWGCWC | 2 cut(s) | 45, 713 |
| BbvI | GCAGC | 7 cut(s) | 343, 426, 976, 1012, 1168, 1171, 1175 |
| BccI | CCATC | 3 cut(s) | 782, 929, 956 |
| BceAI | ACGGC | 1 cut(s) | 295 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 22, 56 |
| BciT130I | CCWGG | 3 cut(s) | 50, 524, 882 |
| BciVI | GTATCC | 1 cut(s) | 1130 |
| BcnI | CCSGG | 1 cut(s) | 1417 |
| BcoDI | GTCTC | 1 cut(s) | 554 |
| BfaI | CTAG | 1 cut(s) | 1202 |
| BfmI | CTRYAG | 3 cut(s) | 351, 729, 1185 |
| BfuAI | ACCTGC | 2 cut(s) | 285, 325 |
| BfuI | GTATCC | 1 cut(s) | 1130 |
| BisI | GCNGC | 9 cut(s) | 357, 440, 475, 990, 1026, 1029, 1164, 1182, 1185 |
| BlnI | CCTAGG | 1 cut(s) | 1201 |
| BlsI | GCNGC | 9 cut(s) | 358, 441, 476, 991, 1027, 1030, 1165, 1183, 1186 |
| BmcAI | AGTACT | 1 cut(s) | 1271 |
| Bme1390I | CCNGG | 4 cut(s) | 50, 524, 882, 1417 |
| BmeT110I | CYCGRG | 1 cut(s) | 84 |
| BmgBI | CACGTC | 1 cut(s) | 714 |
| BmiI | GGNNCC | 2 cut(s) | 1242, 1277 |
| BmrFI | CCNGG | 4 cut(s) | 50, 524, 882, 1417 |
| BmsI | GCATC | 1 cut(s) | 367 |
| BpiI | GAAGAC | 1 cut(s) | 282 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 427, 459 |
| BpmI | CTGGAG | 4 cut(s) | 545, 903, 978, 1294 |
| Bpu14I | TTCGAA | 3 cut(s) | 32, 247, 1149 |
| BpuEI | CTTGAG | 2 cut(s) | 164, 536 |
| BpuMI | CCSGG | 1 cut(s) | 1417 |
| BsaAI | YACGTR | 1 cut(s) | 1178 |
| BsaBI | GATNNNNATC | 1 cut(s) | 75 |
| BsaHI | GRCGYC | 1 cut(s) | 8 |
| BsaI | GGTCTC | 1 cut(s) | 554 |
| BsaJI | CCNNGG | 7 cut(s) | 83, 420, 483, 626, 1201, 1285, 1324 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 876, 906, 1197, 1227 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1250, 1381 |
| Bse1I | ACTGG | 3 cut(s) | 961, 1244, 1277 |
| Bse21I | CCTNAGG | 1 cut(s) | 678 |
| Bse3DI | GCAATG | 1 cut(s) | 1227 |
| Bse8I | GATNNNNATC | 1 cut(s) | 75 |
| BseBI | CCWGG | 3 cut(s) | 50, 524, 882 |
| BseDI | CCNNGG | 7 cut(s) | 83, 420, 483, 626, 1201, 1285, 1324 |
| BseGI | GGATG | 5 cut(s) | 94, 171, 196, 895, 1054 |
| BseJI | GATNNNNATC | 1 cut(s) | 75 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1250, 1381 |
| BseMI | GCAATG | 1 cut(s) | 1227 |
| BseMII | CTCAG | 1 cut(s) | 1181 |
| BseNI | ACTGG | 3 cut(s) | 961, 1244, 1277 |
| BseRI | GAGGAG | 2 cut(s) | 335, 1344 |
| BseXI | GCAGC | 7 cut(s) | 343, 426, 976, 1012, 1168, 1171, 1175 |
| Bsh1236I | CGCG | 2 cut(s) | 1308, 1326 |
| BshFI | GGCC | 2 cut(s) | 1290, 1374 |
| BsiHKAI | GWGCWC | 2 cut(s) | 45, 713 |
| BsiHKCI | CYCGRG | 1 cut(s) | 84 |
| BsiSI | CCGG | 1 cut(s) | 1417 |
| BslFI | GGGAC | 2 cut(s) | 194, 1397 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1250, 1381 |
| BsmAI | GTCTC | 1 cut(s) | 554 |
| BsmFI | GGGAC | 2 cut(s) | 194, 1397 |
| BsmI | GAATGC | 1 cut(s) | 695 |
| BsnI | GGCC | 2 cut(s) | 1290, 1374 |
| Bso31I | GGTCTC | 1 cut(s) | 554 |
| BsoBI | CYCGRG | 1 cut(s) | 84 |
| Bsp119I | TTCGAA | 3 cut(s) | 32, 247, 1149 |
| Bsp1286I | GDGCHC | 2 cut(s) | 45, 713 |
| Bsp143I | GATC | 3 cut(s) | 519, 1119, 1376 |
| BspACI | CCGC | 9 cut(s) | 46, 474, 643, 668, 1029, 1251, 1306, 1324, 1326 |
| BspANI | GGCC | 2 cut(s) | 1290, 1374 |
| BspCNI | CTCAG | 1 cut(s) | 1180 |
| BspFNI | CGCG | 2 cut(s) | 1308, 1326 |
| BspLI | GGNNCC | 2 cut(s) | 1242, 1277 |
| BspMAI | CTGCAG | 2 cut(s) | 733, 1189 |
| BspMI | ACCTGC | 2 cut(s) | 285, 325 |
| BspPI | GGATC | 1 cut(s) | 514 |
| BspQI | GCTCTTC | 1 cut(s) | 1146 |
| BspT104I | TTCGAA | 3 cut(s) | 32, 247, 1149 |
| BspTNI | GGTCTC | 1 cut(s) | 554 |
| BsrDI | GCAATG | 1 cut(s) | 1227 |
| BsrI | ACTGG | 3 cut(s) | 961, 1244, 1277 |
| BssECI | CCNNGG | 7 cut(s) | 83, 420, 483, 626, 1201, 1285, 1324 |
| BssMI | GATC | 3 cut(s) | 519, 1119, 1376 |
| BssNI | GRCGYC | 1 cut(s) | 8 |
| BssT1I | CCWWGG | 3 cut(s) | 420, 483, 1201 |
| Bst2UI | CCWGG | 3 cut(s) | 50, 524, 882 |
| Bst4CI | ACNGT | 4 cut(s) | 352, 366, 431, 1099 |
| Bst6I | CTCTTC | 4 cut(s) | 249, 996, 1146, 1286 |
| BstACI | GRCGYC | 1 cut(s) | 8 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1181 |
| BstBAI | YACGTR | 1 cut(s) | 1178 |
| BstBI | TTCGAA | 3 cut(s) | 32, 247, 1149 |
| BstC8I | GCNNGC | 1 cut(s) | 622 |
| BstDEI | CTNAG | 2 cut(s) | 678, 1167 |
| BstDSI | CCRYGG | 2 cut(s) | 1285, 1324 |
| BstF5I | GGATG | 5 cut(s) | 94, 171, 196, 895, 1054 |
| BstFNI | CGCG | 2 cut(s) | 1308, 1326 |
| BstKTI | GATC | 3 cut(s) | 522, 1122, 1379 |
| BstMAI | GTCTC | 1 cut(s) | 554 |
| BstMBI | GATC | 3 cut(s) | 519, 1119, 1376 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1172, 1181 |
| BstNI | CCWGG | 3 cut(s) | 50, 524, 882 |
| BstSCI | CCNGG | 4 cut(s) | 48, 522, 880, 1415 |
| BstSFI | CTRYAG | 3 cut(s) | 351, 729, 1185 |
| BstUI | CGCG | 2 cut(s) | 1308, 1326 |
| BstV1I | GCAGC | 7 cut(s) | 343, 426, 976, 1012, 1168, 1171, 1175 |
| BstV2I | GAAGAC | 1 cut(s) | 282 |
| BstX2I | RGATCY | 1 cut(s) | 519 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1091 |
| BstYI | RGATCY | 1 cut(s) | 519 |
| Bsu36I | CCTNAGG | 1 cut(s) | 678 |
| BsuI | GTATCC | 1 cut(s) | 1130 |
| BsuRI | GGCC | 2 cut(s) | 1290, 1374 |
| BtgI | CCRYGG | 2 cut(s) | 1285, 1324 |
| BtrI | CACGTC | 1 cut(s) | 714 |
| BtsCI | GGATG | 5 cut(s) | 94, 171, 196, 895, 1054 |
| BtsI | GCAGTG | 1 cut(s) | 477 |
| BtsIMutI | CAGTG | 3 cut(s) | 436, 477, 1095 |
| BveI | ACCTGC | 2 cut(s) | 285, 325 |
| Cac8I | GCNNGC | 1 cut(s) | 622 |
| Cfr42I | CCGCGG | 1 cut(s) | 1327 |
| CseI | GACGC | 1 cut(s) | 16 |
| Csp6I | GTAC | 4 cut(s) | 744, 768, 1105, 1270 |
| CviAII | CATG | 3 cut(s) | 449, 1045, 1370 |
| CviQI | GTAC | 4 cut(s) | 744, 768, 1105, 1270 |
| DdeI | CTNAG | 2 cut(s) | 678, 1167 |
| DpnI | GATC | 3 cut(s) | 521, 1121, 1378 |
| DpnII | GATC | 3 cut(s) | 519, 1119, 1376 |
| EaeI | YGGCCR | 2 cut(s) | 1288, 1372 |
| Eam1104I | CTCTTC | 4 cut(s) | 249, 996, 1146, 1286 |
| EarI | CTCTTC | 4 cut(s) | 249, 996, 1146, 1286 |
| EciI | GGCGGA | 2 cut(s) | 35, 683 |
| Eco130I | CCWWGG | 3 cut(s) | 420, 483, 1201 |
| Eco31I | GGTCTC | 1 cut(s) | 554 |
| Eco57I | CTGAAG | 6 cut(s) | 49, 234, 332, 789, 999, 1179 |
| Eco72I | CACGTG | 1 cut(s) | 1178 |
| Eco81I | CCTNAGG | 1 cut(s) | 678 |
| Eco88I | CYCGRG | 1 cut(s) | 84 |
| EcoRII | CCWGG | 3 cut(s) | 48, 522, 880 |
| EcoT14I | CCWWGG | 3 cut(s) | 420, 483, 1201 |
| ErhI | CCWWGG | 3 cut(s) | 420, 483, 1201 |
| FaeI | CATG | 3 cut(s) | 452, 1048, 1373 |
| FaqI | GGGAC | 2 cut(s) | 194, 1397 |
| FatI | CATG | 3 cut(s) | 448, 1044, 1369 |
| FblI | GTMKAC | 2 cut(s) | 299, 339 |
| Fnu4HI | GCNGC | 9 cut(s) | 357, 440, 475, 990, 1026, 1029, 1164, 1182, 1185 |
| FokI | GGATG | 5 cut(s) | 101, 178, 203, 902, 1061 |
| Fsp4HI | GCNGC | 9 cut(s) | 357, 440, 475, 990, 1026, 1029, 1164, 1182, 1185 |
| FspBI | CTAG | 1 cut(s) | 1202 |
| GluI | GCNGC | 9 cut(s) | 357, 440, 475, 990, 1026, 1029, 1164, 1182, 1185 |
| GsuI | CTGGAG | 4 cut(s) | 545, 903, 978, 1294 |
| HaeIII | GGCC | 2 cut(s) | 1290, 1374 |
| HapII | CCGG | 1 cut(s) | 1417 |
| HgaI | GACGC | 1 cut(s) | 16 |
| Hin1I | GRCGYC | 1 cut(s) | 8 |
| Hin1II | CATG | 3 cut(s) | 452, 1048, 1373 |
| HincII | GTYRAC | 2 cut(s) | 427, 853 |
| HindII | GTYRAC | 2 cut(s) | 427, 853 |
| HindIII | AAGCTT | 3 cut(s) | 266, 383, 723 |
| HinfI | GANTC | 3 cut(s) | 800, 839, 1130 |
| HpaI | GTTAAC | 2 cut(s) | 427, 853 |
| HpaII | CCGG | 1 cut(s) | 1417 |
| HphI | GGTGA | 4 cut(s) | 354, 872, 953, 1265 |
| Hpy166II | GTNNAC | 5 cut(s) | 159, 300, 340, 427, 853 |
| Hpy188III | TCNNGA | 3 cut(s) | 86, 310, 1134 |
| Hpy8I | GTNNAC | 5 cut(s) | 159, 300, 340, 427, 853 |
| Hpy99I | CGWCG | 1 cut(s) | 10 |
| HpyAV | CCTTC | 8 cut(s) | 21, 119, 568, 829, 938, 984, 1000, 1329 |
| HpyCH4III | ACNGT | 4 cut(s) | 352, 366, 431, 1099 |
| HpyCH4IV | ACGT | 3 cut(s) | 701, 713, 1177 |
| HpyCH4V | TGCA | 6 cut(s) | 455, 695, 731, 992, 1187, 1232 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1172, 1181 |
| HpyF3I | CTNAG | 2 cut(s) | 678, 1167 |
| HpySE526I | ACGT | 3 cut(s) | 701, 713, 1177 |
| Hsp92I | GRCGYC | 1 cut(s) | 8 |
| Hsp92II | CATG | 3 cut(s) | 452, 1048, 1373 |
| KspAI | GTTAAC | 2 cut(s) | 427, 853 |
| KspI | CCGCGG | 1 cut(s) | 1327 |
| Kzo9I | GATC | 3 cut(s) | 519, 1119, 1376 |
| LguI | GCTCTTC | 1 cut(s) | 1146 |
| LmnI | GCTCC | 3 cut(s) | 48, 526, 1275 |
| Lsp1109I | GCAGC | 7 cut(s) | 343, 426, 976, 1012, 1168, 1171, 1175 |
| LweI | GCATC | 1 cut(s) | 367 |
| MaeI | CTAG | 1 cut(s) | 1202 |
| MaeII | ACGT | 3 cut(s) | 701, 713, 1177 |
| MaeIII | GTNAC | 1 cut(s) | 776 |
| MalI | GATC | 3 cut(s) | 521, 1121, 1378 |
| MboI | GATC | 3 cut(s) | 519, 1119, 1376 |
| MflI | RGATCY | 1 cut(s) | 519 |
| MhlI | GDGCHC | 2 cut(s) | 45, 713 |
| MlsI | TGGCCA | 1 cut(s) | 1290 |
| MluCI | AATT | 6 cut(s) | 413, 876, 1088, 1222, 1301, 1421 |
| MluNI | TGGCCA | 1 cut(s) | 1290 |
| MlyI | GAGTC | 1 cut(s) | 848 |
| MmeI | TCCRAC | 2 cut(s) | 822, 1343 |
| Mox20I | TGGCCA | 1 cut(s) | 1290 |
| MroXI | GAANNNNTTC | 3 cut(s) | 243, 876, 1223 |
| MscI | TGGCCA | 1 cut(s) | 1290 |
| MseI | TTAA | 7 cut(s) | 99, 426, 704, 852, 894, 1101, 1116 |
| Msp20I | TGGCCA | 1 cut(s) | 1290 |
| MspA1I | CMGCKG | 2 cut(s) | 1251, 1326 |
| MspI | CCGG | 1 cut(s) | 1417 |
| MspR9I | CCNGG | 4 cut(s) | 50, 524, 882, 1417 |
| Mva1269I | GAATGC | 1 cut(s) | 695 |
| MvaI | CCWGG | 3 cut(s) | 50, 524, 882 |
| MvnI | CGCG | 2 cut(s) | 1308, 1326 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1172, 1181 |
| NciI | CCSGG | 1 cut(s) | 1417 |
| NdeII | GATC | 3 cut(s) | 519, 1119, 1376 |
| NlaIII | CATG | 3 cut(s) | 452, 1048, 1373 |
| NlaIV | GGNNCC | 2 cut(s) | 1242, 1277 |
| NspV | TTCGAA | 3 cut(s) | 32, 247, 1149 |
| PciSI | GCTCTTC | 1 cut(s) | 1146 |
| PctI | GAATGC | 1 cut(s) | 695 |
| PdmI | GAANNNNTTC | 3 cut(s) | 243, 876, 1223 |
| PfeI | GAWTC | 2 cut(s) | 800, 1130 |
| PfoI | TCCNGGA | 2 cut(s) | 522, 880 |
| PkrI | GCNGC | 9 cut(s) | 358, 441, 476, 991, 1027, 1030, 1165, 1183, 1186 |
| PleI | GAGTC | 1 cut(s) | 847 |
| PmaCI | CACGTG | 1 cut(s) | 1178 |
| PmlI | CACGTG | 1 cut(s) | 1178 |
| PpsI | GAGTC | 1 cut(s) | 847 |
| Ppu21I | YACGTR | 1 cut(s) | 1178 |
| Psp6I | CCWGG | 3 cut(s) | 48, 522, 880 |
| PspCI | CACGTG | 1 cut(s) | 1178 |
| PspGI | CCWGG | 3 cut(s) | 48, 522, 880 |
| PspN4I | GGNNCC | 2 cut(s) | 1242, 1277 |
| PstI | CTGCAG | 2 cut(s) | 733, 1189 |
| PsuI | RGATCY | 1 cut(s) | 519 |
| RsaI | GTAC | 4 cut(s) | 745, 769, 1106, 1271 |
| RsaNI | GTAC | 4 cut(s) | 744, 768, 1105, 1270 |
| SacII | CCGCGG | 1 cut(s) | 1327 |
| SapI | GCTCTTC | 1 cut(s) | 1146 |
| SaqAI | TTAA | 7 cut(s) | 99, 426, 704, 852, 894, 1101, 1116 |
| SatI | GCNGC | 9 cut(s) | 357, 440, 475, 990, 1026, 1029, 1164, 1182, 1185 |
| Sau3AI | GATC | 3 cut(s) | 519, 1119, 1376 |
| ScaI | AGTACT | 1 cut(s) | 1271 |
| SchI | GAGTC | 1 cut(s) | 848 |
| ScrFI | CCNGG | 4 cut(s) | 50, 524, 882, 1417 |
| SduI | GDGCHC | 2 cut(s) | 45, 713 |
| SfaNI | GCATC | 1 cut(s) | 367 |
| SfcI | CTRYAG | 3 cut(s) | 351, 729, 1185 |
| Sfr303I | CCGCGG | 1 cut(s) | 1327 |
| SfuI | TTCGAA | 3 cut(s) | 32, 247, 1149 |
| SgrBI | CCGCGG | 1 cut(s) | 1327 |
| SmlI | CTYRAG | 2 cut(s) | 179, 551 |
| SmoI | CTYRAG | 2 cut(s) | 179, 551 |
| Sse9I | AATT | 6 cut(s) | 413, 876, 1088, 1222, 1301, 1421 |
| SsiI | CCGC | 9 cut(s) | 46, 474, 643, 668, 1029, 1251, 1306, 1324, 1326 |
| SspMI | CTAG | 1 cut(s) | 1202 |
| StyD4I | CCNGG | 4 cut(s) | 48, 522, 880, 1415 |
| StyI | CCWWGG | 3 cut(s) | 420, 483, 1201 |
| TaaI | ACNGT | 4 cut(s) | 352, 366, 431, 1099 |
| TaiI | ACGT | 3 cut(s) | 704, 716, 1180 |
| TaqI | TCGA | 5 cut(s) | 32, 247, 396, 489, 1149 |
| TasI | AATT | 6 cut(s) | 413, 876, 1088, 1222, 1301, 1421 |
| TatI | WGTACW | 3 cut(s) | 767, 1104, 1269 |
| TauI | GCSGC | 2 cut(s) | 477, 1031 |
| TfiI | GAWTC | 2 cut(s) | 800, 1130 |
| Tru1I | TTAA | 7 cut(s) | 99, 426, 704, 852, 894, 1101, 1116 |
| Tru9I | TTAA | 7 cut(s) | 99, 426, 704, 852, 894, 1101, 1116 |
| TscAI | CASTG | 3 cut(s) | 436, 484, 1102 |
| TseI | GCWGC | 7 cut(s) | 356, 439, 989, 1025, 1163, 1181, 1184 |
| TspDTI | ATGAA | 2 cut(s) | 885, 1216 |
| TspGWI | ACGGA | 1 cut(s) | 1274 |
| TspRI | CASTG | 3 cut(s) | 436, 484, 1102 |
| XapI | RAATTY | 5 cut(s) | 876, 1088, 1222, 1301, 1421 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 520 |
| XmaJI | CCTAGG | 1 cut(s) | 1201 |
| XmiI | GTMKAC | 2 cut(s) | 299, 339 |
| XmnI | GAANNNNTTC | 3 cut(s) | 243, 876, 1223 |
| XspI | CTAG | 1 cut(s) | 1202 |
| ZrmI | AGTACT | 1 cut(s) | 1271 |