Prupe.1G452100_v2.0.a1

La protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
38045398 .. 38048830
3433 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G452100.1

Sequence Viewer

Length: 1428 bp
ATGGCGACGCCTTCATTGGACGAAGAAACTTCGAAGAAAGTGCTCCGCCAGGTTGAGTTTTACTTCAGCGATAGCAATCTTCCTCGGGATGATTTTCTTAAAAAAACCATAAGCGAAAGCGAAGAAGGATTGGTTAGCTTGGCTTTGATATGCTCGTTTACTCGGATGAGAAATCATCTCAAGTTGGGGGATGTGAAGCCAGATAGTGTCCCTGAAGATAGAGTAAAGGCTGTTGCCGAAACTCTTCGAAAATCTACCACCCTAAAGCTTTCCGAAGACGGCACAAAGGTTGGCAGGTCTACTGAAATCCTGAAGCCAGAGGAGTTGATAGAGCAGGTAGACATAAGAACTGTAGCTGCTTCACCGTTTGAGTATGATGCGAAGCTTGAAGATGTCGAAACATTTTTTGGACAATTTGCCAAGGTTAACAGTGTGAGGCTGCCTCGTCATGTTGCAGACAAAAAGTTGTTTTGCGGCACTGCCTTGGTCGAGTTTTCCACAGAGGAAGAAGCCAATAAGATCCTGGAGCAATCTTTGGATTATTCAGGTCTCAAGTTAGACCTAAAACCAAAGAAGGATTTTGATACTGATAGAGAAAGAGAGGTAAAGGAGTATGAGGCTCGCCCTCGGACAGATACAAACCGCAAGAATAACTCAAAAGCAGAGGCGGACTATCCTAAGGGGTTGATTGTTGCATTCACGTTAAAGAGCACGTCAGATAAAGCTTCTGCAGAGCATAGTGGTACTCCTGCCTCTGCTAATGGTAGTACAAATGGTAACAAAACCGATGGTCAAGTTGATTCTTCAGAGAACGCTACCGAAGAAACTGAAAGGAAGGAGTCGGAAGATGTTAACAGAGGTGATGTAGATGAAGAAATTCCTGGAGAGGATGTTAAGGAGAAAAAGGAAAATGCTGATGAGAAAAATAGTTCAGATGGTGGTGAAGGAAAGGAAACTGGAGATGGGAAAAATCCTTCTGAAGTTCCTGCTGCAAAGAGTGAAGAGAAGGAAGAAAGATTGAGTGCTGCCGCATACAAAGATAACATGGATGTTGTTATGCGTGAGGATTTGAAGATTGTATTCCAAAAATTTGGCACTGTTAAGTACATTGATTTTAAGATCGGAGAAGAATCAGGATACATTCGGTTCGAAGAGCCTGAAGCAGCTCAGAAAGCACGTGCTGCTGCAGTCCTTACTGACCTAGGAGGTCTGGTTGTGAAGAATTTCATTGCAACTTTGGAACCAGTCAGCGGTGAGGCTGAAAAGGAGTACTGGAGCCTCTTCCGTGGCCACCAAGAAAAATTCCGCGATAGTAAGAGCCACCGCGGAGGAGGAAGGGGAGGGAAACACAACAATAGGGGTTGGAAACATGGCCGATCAAGGGACAATGACAATGGAGGTCGCCCAAACAAAGCCCGGAAATTTTGA

Protein Analysis

476

Amino Acids

52.98

Weight (kDa)

5.34

Isoelectric Point (pI)

34.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011399)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 285, 325
AccI GTMKAC 2 cut(s) 299, 339
AccII CGCG 2 cut(s) 1308, 1326
AciI CCGC 9 cut(s) 46, 474, 643, 668, 1029, 1251, 1306, 1324, 1326
AclWI GGATC 1 cut(s) 514
AcoI YGGCCR 2 cut(s) 1288, 1372
AcsI RAATTY 5 cut(s) 876, 1088, 1222, 1301, 1421
AcuI CTGAAG 6 cut(s) 49, 234, 332, 789, 999, 1179
AcvI CACGTG 1 cut(s) 1178
AcyI GRCGYC 1 cut(s) 8
AfaI GTAC 4 cut(s) 745, 769, 1106, 1271
AfiI CCNNNNNNNGG 2 cut(s) 1250, 1381
AgsI TTSAA 2 cut(s) 389, 1072
AjiI CACGTC 1 cut(s) 714
AjnI CCWGG 3 cut(s) 48, 522, 880
AjuI GAANNNNNNNTTGG 2 cut(s) 390, 422
AluBI AGCT 6 cut(s) 138, 268, 356, 385, 725, 1166
AluI AGCT 6 cut(s) 138, 268, 356, 385, 725, 1166
Alw21I GWGCWC 2 cut(s) 45, 713
Alw26I GTCTC 1 cut(s) 554
AlwI GGATC 1 cut(s) 514
Ama87I CYCGRG 1 cut(s) 84
AoxI GGCC 2 cut(s) 1288, 1372
ApeKI GCWGC 7 cut(s) 356, 439, 989, 1025, 1163, 1181, 1184
ApoI RAATTY 5 cut(s) 876, 1088, 1222, 1301, 1421
Asp700I GAANNNNTTC 3 cut(s) 243, 876, 1223
AspA2I CCTAGG 1 cut(s) 1201
AsuC2I CCSGG 1 cut(s) 1417
AsuHPI GGTGA 4 cut(s) 354, 872, 953, 1265
AsuII TTCGAA 3 cut(s) 32, 247, 1149
AvaI CYCGRG 1 cut(s) 84
AvrII CCTAGG 1 cut(s) 1201
AxyI CCTNAGG 1 cut(s) 678
BalI TGGCCA 1 cut(s) 1290
BbrPI CACGTG 1 cut(s) 1178
BbsI GAAGAC 1 cut(s) 282
Bbv12I GWGCWC 2 cut(s) 45, 713
BbvI GCAGC 7 cut(s) 343, 426, 976, 1012, 1168, 1171, 1175
BccI CCATC 3 cut(s) 782, 929, 956
BceAI ACGGC 1 cut(s) 295
BcgI CGANNNNNNTGC 2 cut(s) 22, 56
BciT130I CCWGG 3 cut(s) 50, 524, 882
BciVI GTATCC 1 cut(s) 1130
BcnI CCSGG 1 cut(s) 1417
BcoDI GTCTC 1 cut(s) 554
BfaI CTAG 1 cut(s) 1202
BfmI CTRYAG 3 cut(s) 351, 729, 1185
BfuAI ACCTGC 2 cut(s) 285, 325
BfuI GTATCC 1 cut(s) 1130
BisI GCNGC 9 cut(s) 357, 440, 475, 990, 1026, 1029, 1164, 1182, 1185
BlnI CCTAGG 1 cut(s) 1201
BlsI GCNGC 9 cut(s) 358, 441, 476, 991, 1027, 1030, 1165, 1183, 1186
BmcAI AGTACT 1 cut(s) 1271
Bme1390I CCNGG 4 cut(s) 50, 524, 882, 1417
BmeT110I CYCGRG 1 cut(s) 84
BmgBI CACGTC 1 cut(s) 714
BmiI GGNNCC 2 cut(s) 1242, 1277
BmrFI CCNGG 4 cut(s) 50, 524, 882, 1417
BmsI GCATC 1 cut(s) 367
BpiI GAAGAC 1 cut(s) 282
BplI GAGNNNNNCTC 2 cut(s) 427, 459
BpmI CTGGAG 4 cut(s) 545, 903, 978, 1294
Bpu14I TTCGAA 3 cut(s) 32, 247, 1149
BpuEI CTTGAG 2 cut(s) 164, 536
BpuMI CCSGG 1 cut(s) 1417
BsaAI YACGTR 1 cut(s) 1178
BsaBI GATNNNNATC 1 cut(s) 75
BsaHI GRCGYC 1 cut(s) 8
BsaI GGTCTC 1 cut(s) 554
BsaJI CCNNGG 7 cut(s) 83, 420, 483, 626, 1201, 1285, 1324
BsaXI ACNNNNNCTCC 4 cut(s) 876, 906, 1197, 1227
Bsc4I CCNNNNNNNGG 2 cut(s) 1250, 1381
Bse1I ACTGG 3 cut(s) 961, 1244, 1277
Bse21I CCTNAGG 1 cut(s) 678
Bse3DI GCAATG 1 cut(s) 1227
Bse8I GATNNNNATC 1 cut(s) 75
BseBI CCWGG 3 cut(s) 50, 524, 882
BseDI CCNNGG 7 cut(s) 83, 420, 483, 626, 1201, 1285, 1324
BseGI GGATG 5 cut(s) 94, 171, 196, 895, 1054
BseJI GATNNNNATC 1 cut(s) 75
BseLI CCNNNNNNNGG 2 cut(s) 1250, 1381
BseMI GCAATG 1 cut(s) 1227
BseMII CTCAG 1 cut(s) 1181
BseNI ACTGG 3 cut(s) 961, 1244, 1277
BseRI GAGGAG 2 cut(s) 335, 1344
BseXI GCAGC 7 cut(s) 343, 426, 976, 1012, 1168, 1171, 1175
Bsh1236I CGCG 2 cut(s) 1308, 1326
BshFI GGCC 2 cut(s) 1290, 1374
BsiHKAI GWGCWC 2 cut(s) 45, 713
BsiHKCI CYCGRG 1 cut(s) 84
BsiSI CCGG 1 cut(s) 1417
BslFI GGGAC 2 cut(s) 194, 1397
BslI CCNNNNNNNGG 2 cut(s) 1250, 1381
BsmAI GTCTC 1 cut(s) 554
BsmFI GGGAC 2 cut(s) 194, 1397
BsmI GAATGC 1 cut(s) 695
BsnI GGCC 2 cut(s) 1290, 1374
Bso31I GGTCTC 1 cut(s) 554
BsoBI CYCGRG 1 cut(s) 84
Bsp119I TTCGAA 3 cut(s) 32, 247, 1149
Bsp1286I GDGCHC 2 cut(s) 45, 713
Bsp143I GATC 3 cut(s) 519, 1119, 1376
BspACI CCGC 9 cut(s) 46, 474, 643, 668, 1029, 1251, 1306, 1324, 1326
BspANI GGCC 2 cut(s) 1290, 1374
BspCNI CTCAG 1 cut(s) 1180
BspFNI CGCG 2 cut(s) 1308, 1326
BspLI GGNNCC 2 cut(s) 1242, 1277
BspMAI CTGCAG 2 cut(s) 733, 1189
BspMI ACCTGC 2 cut(s) 285, 325
BspPI GGATC 1 cut(s) 514
BspQI GCTCTTC 1 cut(s) 1146
BspT104I TTCGAA 3 cut(s) 32, 247, 1149
BspTNI GGTCTC 1 cut(s) 554
BsrDI GCAATG 1 cut(s) 1227
BsrI ACTGG 3 cut(s) 961, 1244, 1277
BssECI CCNNGG 7 cut(s) 83, 420, 483, 626, 1201, 1285, 1324
BssMI GATC 3 cut(s) 519, 1119, 1376
BssNI GRCGYC 1 cut(s) 8
BssT1I CCWWGG 3 cut(s) 420, 483, 1201
Bst2UI CCWGG 3 cut(s) 50, 524, 882
Bst4CI ACNGT 4 cut(s) 352, 366, 431, 1099
Bst6I CTCTTC 4 cut(s) 249, 996, 1146, 1286
BstACI GRCGYC 1 cut(s) 8
BstAPI GCANNNNNTGC 1 cut(s) 1181
BstBAI YACGTR 1 cut(s) 1178
BstBI TTCGAA 3 cut(s) 32, 247, 1149
BstC8I GCNNGC 1 cut(s) 622
BstDEI CTNAG 2 cut(s) 678, 1167
BstDSI CCRYGG 2 cut(s) 1285, 1324
BstF5I GGATG 5 cut(s) 94, 171, 196, 895, 1054
BstFNI CGCG 2 cut(s) 1308, 1326
BstKTI GATC 3 cut(s) 522, 1122, 1379
BstMAI GTCTC 1 cut(s) 554
BstMBI GATC 3 cut(s) 519, 1119, 1376
BstMWI GCNNNNNNNGC 2 cut(s) 1172, 1181
BstNI CCWGG 3 cut(s) 50, 524, 882
BstSCI CCNGG 4 cut(s) 48, 522, 880, 1415
BstSFI CTRYAG 3 cut(s) 351, 729, 1185
BstUI CGCG 2 cut(s) 1308, 1326
BstV1I GCAGC 7 cut(s) 343, 426, 976, 1012, 1168, 1171, 1175
BstV2I GAAGAC 1 cut(s) 282
BstX2I RGATCY 1 cut(s) 519
BstXI CCANNNNNNTGG 1 cut(s) 1091
BstYI RGATCY 1 cut(s) 519
Bsu36I CCTNAGG 1 cut(s) 678
BsuI GTATCC 1 cut(s) 1130
BsuRI GGCC 2 cut(s) 1290, 1374
BtgI CCRYGG 2 cut(s) 1285, 1324
BtrI CACGTC 1 cut(s) 714
BtsCI GGATG 5 cut(s) 94, 171, 196, 895, 1054
BtsI GCAGTG 1 cut(s) 477
BtsIMutI CAGTG 3 cut(s) 436, 477, 1095
BveI ACCTGC 2 cut(s) 285, 325
Cac8I GCNNGC 1 cut(s) 622
Cfr42I CCGCGG 1 cut(s) 1327
CseI GACGC 1 cut(s) 16
Csp6I GTAC 4 cut(s) 744, 768, 1105, 1270
CviAII CATG 3 cut(s) 449, 1045, 1370
CviQI GTAC 4 cut(s) 744, 768, 1105, 1270
DdeI CTNAG 2 cut(s) 678, 1167
DpnI GATC 3 cut(s) 521, 1121, 1378
DpnII GATC 3 cut(s) 519, 1119, 1376
EaeI YGGCCR 2 cut(s) 1288, 1372
Eam1104I CTCTTC 4 cut(s) 249, 996, 1146, 1286
EarI CTCTTC 4 cut(s) 249, 996, 1146, 1286
EciI GGCGGA 2 cut(s) 35, 683
Eco130I CCWWGG 3 cut(s) 420, 483, 1201
Eco31I GGTCTC 1 cut(s) 554
Eco57I CTGAAG 6 cut(s) 49, 234, 332, 789, 999, 1179
Eco72I CACGTG 1 cut(s) 1178
Eco81I CCTNAGG 1 cut(s) 678
Eco88I CYCGRG 1 cut(s) 84
EcoRII CCWGG 3 cut(s) 48, 522, 880
EcoT14I CCWWGG 3 cut(s) 420, 483, 1201
ErhI CCWWGG 3 cut(s) 420, 483, 1201
FaeI CATG 3 cut(s) 452, 1048, 1373
FaqI GGGAC 2 cut(s) 194, 1397
FatI CATG 3 cut(s) 448, 1044, 1369
FblI GTMKAC 2 cut(s) 299, 339
Fnu4HI GCNGC 9 cut(s) 357, 440, 475, 990, 1026, 1029, 1164, 1182, 1185
FokI GGATG 5 cut(s) 101, 178, 203, 902, 1061
Fsp4HI GCNGC 9 cut(s) 357, 440, 475, 990, 1026, 1029, 1164, 1182, 1185
FspBI CTAG 1 cut(s) 1202
GluI GCNGC 9 cut(s) 357, 440, 475, 990, 1026, 1029, 1164, 1182, 1185
GsuI CTGGAG 4 cut(s) 545, 903, 978, 1294
HaeIII GGCC 2 cut(s) 1290, 1374
HapII CCGG 1 cut(s) 1417
HgaI GACGC 1 cut(s) 16
Hin1I GRCGYC 1 cut(s) 8
Hin1II CATG 3 cut(s) 452, 1048, 1373
HincII GTYRAC 2 cut(s) 427, 853
HindII GTYRAC 2 cut(s) 427, 853
HindIII AAGCTT 3 cut(s) 266, 383, 723
HinfI GANTC 3 cut(s) 800, 839, 1130
HpaI GTTAAC 2 cut(s) 427, 853
HpaII CCGG 1 cut(s) 1417
HphI GGTGA 4 cut(s) 354, 872, 953, 1265
Hpy166II GTNNAC 5 cut(s) 159, 300, 340, 427, 853
Hpy188III TCNNGA 3 cut(s) 86, 310, 1134
Hpy8I GTNNAC 5 cut(s) 159, 300, 340, 427, 853
Hpy99I CGWCG 1 cut(s) 10
HpyAV CCTTC 8 cut(s) 21, 119, 568, 829, 938, 984, 1000, 1329
HpyCH4III ACNGT 4 cut(s) 352, 366, 431, 1099
HpyCH4IV ACGT 3 cut(s) 701, 713, 1177
HpyCH4V TGCA 6 cut(s) 455, 695, 731, 992, 1187, 1232
HpyF10VI GCNNNNNNNGC 2 cut(s) 1172, 1181
HpyF3I CTNAG 2 cut(s) 678, 1167
HpySE526I ACGT 3 cut(s) 701, 713, 1177
Hsp92I GRCGYC 1 cut(s) 8
Hsp92II CATG 3 cut(s) 452, 1048, 1373
KspAI GTTAAC 2 cut(s) 427, 853
KspI CCGCGG 1 cut(s) 1327
Kzo9I GATC 3 cut(s) 519, 1119, 1376
LguI GCTCTTC 1 cut(s) 1146
LmnI GCTCC 3 cut(s) 48, 526, 1275
Lsp1109I GCAGC 7 cut(s) 343, 426, 976, 1012, 1168, 1171, 1175
LweI GCATC 1 cut(s) 367
MaeI CTAG 1 cut(s) 1202
MaeII ACGT 3 cut(s) 701, 713, 1177
MaeIII GTNAC 1 cut(s) 776
MalI GATC 3 cut(s) 521, 1121, 1378
MboI GATC 3 cut(s) 519, 1119, 1376
MflI RGATCY 1 cut(s) 519
MhlI GDGCHC 2 cut(s) 45, 713
MlsI TGGCCA 1 cut(s) 1290
MluCI AATT 6 cut(s) 413, 876, 1088, 1222, 1301, 1421
MluNI TGGCCA 1 cut(s) 1290
MlyI GAGTC 1 cut(s) 848
MmeI TCCRAC 2 cut(s) 822, 1343
Mox20I TGGCCA 1 cut(s) 1290
MroXI GAANNNNTTC 3 cut(s) 243, 876, 1223
MscI TGGCCA 1 cut(s) 1290
MseI TTAA 7 cut(s) 99, 426, 704, 852, 894, 1101, 1116
Msp20I TGGCCA 1 cut(s) 1290
MspA1I CMGCKG 2 cut(s) 1251, 1326
MspI CCGG 1 cut(s) 1417
MspR9I CCNGG 4 cut(s) 50, 524, 882, 1417
Mva1269I GAATGC 1 cut(s) 695
MvaI CCWGG 3 cut(s) 50, 524, 882
MvnI CGCG 2 cut(s) 1308, 1326
MwoI GCNNNNNNNGC 2 cut(s) 1172, 1181
NciI CCSGG 1 cut(s) 1417
NdeII GATC 3 cut(s) 519, 1119, 1376
NlaIII CATG 3 cut(s) 452, 1048, 1373
NlaIV GGNNCC 2 cut(s) 1242, 1277
NspV TTCGAA 3 cut(s) 32, 247, 1149
PciSI GCTCTTC 1 cut(s) 1146
PctI GAATGC 1 cut(s) 695
PdmI GAANNNNTTC 3 cut(s) 243, 876, 1223
PfeI GAWTC 2 cut(s) 800, 1130
PfoI TCCNGGA 2 cut(s) 522, 880
PkrI GCNGC 9 cut(s) 358, 441, 476, 991, 1027, 1030, 1165, 1183, 1186
PleI GAGTC 1 cut(s) 847
PmaCI CACGTG 1 cut(s) 1178
PmlI CACGTG 1 cut(s) 1178
PpsI GAGTC 1 cut(s) 847
Ppu21I YACGTR 1 cut(s) 1178
Psp6I CCWGG 3 cut(s) 48, 522, 880
PspCI CACGTG 1 cut(s) 1178
PspGI CCWGG 3 cut(s) 48, 522, 880
PspN4I GGNNCC 2 cut(s) 1242, 1277
PstI CTGCAG 2 cut(s) 733, 1189
PsuI RGATCY 1 cut(s) 519
RsaI GTAC 4 cut(s) 745, 769, 1106, 1271
RsaNI GTAC 4 cut(s) 744, 768, 1105, 1270
SacII CCGCGG 1 cut(s) 1327
SapI GCTCTTC 1 cut(s) 1146
SaqAI TTAA 7 cut(s) 99, 426, 704, 852, 894, 1101, 1116
SatI GCNGC 9 cut(s) 357, 440, 475, 990, 1026, 1029, 1164, 1182, 1185
Sau3AI GATC 3 cut(s) 519, 1119, 1376
ScaI AGTACT 1 cut(s) 1271
SchI GAGTC 1 cut(s) 848
ScrFI CCNGG 4 cut(s) 50, 524, 882, 1417
SduI GDGCHC 2 cut(s) 45, 713
SfaNI GCATC 1 cut(s) 367
SfcI CTRYAG 3 cut(s) 351, 729, 1185
Sfr303I CCGCGG 1 cut(s) 1327
SfuI TTCGAA 3 cut(s) 32, 247, 1149
SgrBI CCGCGG 1 cut(s) 1327
SmlI CTYRAG 2 cut(s) 179, 551
SmoI CTYRAG 2 cut(s) 179, 551
Sse9I AATT 6 cut(s) 413, 876, 1088, 1222, 1301, 1421
SsiI CCGC 9 cut(s) 46, 474, 643, 668, 1029, 1251, 1306, 1324, 1326
SspMI CTAG 1 cut(s) 1202
StyD4I CCNGG 4 cut(s) 48, 522, 880, 1415
StyI CCWWGG 3 cut(s) 420, 483, 1201
TaaI ACNGT 4 cut(s) 352, 366, 431, 1099
TaiI ACGT 3 cut(s) 704, 716, 1180
TaqI TCGA 5 cut(s) 32, 247, 396, 489, 1149
TasI AATT 6 cut(s) 413, 876, 1088, 1222, 1301, 1421
TatI WGTACW 3 cut(s) 767, 1104, 1269
TauI GCSGC 2 cut(s) 477, 1031
TfiI GAWTC 2 cut(s) 800, 1130
Tru1I TTAA 7 cut(s) 99, 426, 704, 852, 894, 1101, 1116
Tru9I TTAA 7 cut(s) 99, 426, 704, 852, 894, 1101, 1116
TscAI CASTG 3 cut(s) 436, 484, 1102
TseI GCWGC 7 cut(s) 356, 439, 989, 1025, 1163, 1181, 1184
TspDTI ATGAA 2 cut(s) 885, 1216
TspGWI ACGGA 1 cut(s) 1274
TspRI CASTG 3 cut(s) 436, 484, 1102
XapI RAATTY 5 cut(s) 876, 1088, 1222, 1301, 1421
XcmI CCANNNNNNNNNTGG 1 cut(s) 520
XmaJI CCTAGG 1 cut(s) 1201
XmiI GTMKAC 2 cut(s) 299, 339
XmnI GAANNNNTTC 3 cut(s) 243, 876, 1223
XspI CTAG 1 cut(s) 1202
ZrmI AGTACT 1 cut(s) 1271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.