Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G37130 AT1G77760 |
| fragaria_vesca | FvH4_5g39010 |
| malus_domestica | MD08G1172400.v1.1 MD15G1357900.v1.1 |
| prunus_persica | Prupe.1G505400_v2.0.a1 |
| pyrus_communis | pycom08g14700 pycom15g32000 |
| rosa_chinensis | RchiOBHm_Chr7g0240971 |
| rosa_laevigata | RLG00000000608 |
| rosa_multiflora | Rmu_co8418311.1_g000001 Rmu_sc0041887.1_g000001 Rmu_ssc0000392.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00219350 |
| rosa_rugosa | Rorug07G0341100 |
| rosa_samantha | Rh7AG495900 Rh7BG467400 Rh7CG513400 Rh7DG480400 |
| rosa_wichuraiana | Rw7G041900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 939 |
| AarI | CACCTGC | 2 cut(s) | 1183, 2342 |
| Acc36I | ACCTGC | 3 cut(s) | 720, 1183, 2342 |
| AccB1I | GGYRCC | 1 cut(s) | 370 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 400, 2044 |
| AccBSI | CCGCTC | 3 cut(s) | 66, 376, 675 |
| AccI | GTMKAC | 2 cut(s) | 1109, 2454 |
| AccII | CGCG | 7 cut(s) | 492, 533, 621, 913, 1127, 1940, 1953 |
| AclWI | GGATC | 8 cut(s) | 90, 665, 834, 1445, 1634, 1954, 2372, 2614 |
| AcoI | YGGCCR | 4 cut(s) | 871, 1488, 1977, 2290 |
| AcsI | RAATTY | 1 cut(s) | 2192 |
| AcuI | CTGAAG | 2 cut(s) | 1011, 2013 |
| AcvI | CACGTG | 3 cut(s) | 417, 506, 1188 |
| AcyI | GRCGYC | 3 cut(s) | 42, 57, 1055 |
| AfaI | GTAC | 8 cut(s) | 188, 737, 797, 1004, 1130, 1241, 2285, 2449 |
| AflIII | ACRYGT | 3 cut(s) | 687, 1125, 1185 |
| AgeI | ACCGGT | 1 cut(s) | 367 |
| AgsI | TTSAA | 9 cut(s) | 73, 319, 499, 583, 1637, 2176, 2401, 2512, 2680 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1059 |
| AjiI | CACGTC | 3 cut(s) | 258, 640, 2002 |
| AjnI | CCWGG | 7 cut(s) | 447, 522, 715, 1212, 1462, 1622, 1678 |
| AleI | CACNNNNGTG | 2 cut(s) | 368, 746 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1550, 1582 |
| Alw21I | GWGCWC | 5 cut(s) | 276, 645, 1202, 1452, 2595 |
| Alw26I | GTCTC | 5 cut(s) | 41, 607, 1319, 1546, 2411 |
| Alw44I | GTGCAC | 2 cut(s) | 272, 1198 |
| AlwI | GGATC | 8 cut(s) | 90, 665, 834, 1445, 1634, 1954, 2372, 2614 |
| Ama87I | CYCGRG | 1 cut(s) | 857 |
| ApaI | GGGCCC | 3 cut(s) | 593, 682, 2640 |
| ApaLI | GTGCAC | 2 cut(s) | 272, 1198 |
| ApeKI | GCWGC | 6 cut(s) | 481, 729, 814, 955, 2246, 2665 |
| ApoI | RAATTY | 1 cut(s) | 2192 |
| AsiGI | ACCGGT | 1 cut(s) | 367 |
| AspLEI | GCGC | 5 cut(s) | 533, 621, 669, 1688, 1942 |
| AsuC2I | CCSGG | 5 cut(s) | 177, 466, 858, 859, 2362 |
| AsuHPI | GGTGA | 9 cut(s) | 22, 292, 433, 463, 574, 892, 1177, 2177, 2563 |
| AvaI | CYCGRG | 1 cut(s) | 857 |
| BaeGI | GKGCMC | 7 cut(s) | 276, 416, 593, 682, 1202, 2277, 2640 |
| BalI | TGGCCA | 2 cut(s) | 1490, 1979 |
| BanI | GGYRCC | 1 cut(s) | 370 |
| BanII | GRGCYC | 4 cut(s) | 593, 682, 2211, 2640 |
| BauI | CACGAG | 4 cut(s) | 742, 1087, 1155, 1973 |
| BbrPI | CACGTG | 3 cut(s) | 417, 506, 1188 |
| BbsI | GAAGAC | 2 cut(s) | 2040, 2418 |
| Bbv12I | GWGCWC | 5 cut(s) | 276, 645, 1202, 1452, 2595 |
| BbvCI | CCTCAGC | 2 cut(s) | 1280, 2468 |
| BbvI | GCAGC | 6 cut(s) | 493, 741, 826, 942, 2258, 2677 |
| BccI | CCATC | 9 cut(s) | 292, 581, 760, 871, 1480, 1683, 1748, 2195, 2597 |
| BciT130I | CCWGG | 7 cut(s) | 449, 524, 717, 1214, 1464, 1624, 1680 |
| BclI | TGATCA | 1 cut(s) | 2649 |
| BcnI | CCSGG | 5 cut(s) | 177, 466, 858, 859, 2362 |
| BcoDI | GTCTC | 5 cut(s) | 41, 607, 1319, 1546, 2411 |
| BfaI | CTAG | 2 cut(s) | 221, 1205 |
| BfmI | CTRYAG | 1 cut(s) | 1777 |
| BfoI | RGCGCY | 1 cut(s) | 1689 |
| BfuAI | ACCTGC | 3 cut(s) | 720, 1183, 2342 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 335, 2348 |
| BmcAI | AGTACT | 1 cut(s) | 1241 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1059 |
| BmeT110I | CYCGRG | 1 cut(s) | 857 |
| BmgBI | CACGTC | 3 cut(s) | 258, 640, 2002 |
| BmrI | ACTGGG | 1 cut(s) | 595 |
| BmsI | GCATC | 5 cut(s) | 810, 906, 1704, 1726, 2473 |
| BmuI | ACTGGG | 1 cut(s) | 595 |
| BoxI | GACNNNNGTC | 1 cut(s) | 524 |
| BpiI | GAAGAC | 2 cut(s) | 2040, 2418 |
| BpmI | CTGGAG | 1 cut(s) | 1286 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1280, 2468 |
| BpuEI | CTTGAG | 4 cut(s) | 629, 1514, 1790, 2373 |
| BpuMI | CCSGG | 5 cut(s) | 177, 466, 858, 859, 2362 |
| Bsa29I | ATCGAT | 1 cut(s) | 123 |
| BsaAI | YACGTR | 3 cut(s) | 417, 506, 1188 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1436 |
| BsaHI | GRCGYC | 3 cut(s) | 42, 57, 1055 |
| BsaI | GGTCTC | 1 cut(s) | 1319 |
| BsaWI | WCCGGW | 3 cut(s) | 302, 367, 838 |
| Bse118I | RCCGGY | 5 cut(s) | 367, 443, 1709, 1924, 2053 |
| Bse1I | ACTGG | 6 cut(s) | 431, 590, 1095, 1247, 1269, 2293 |
| Bse3DI | GCAATG | 1 cut(s) | 1411 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1436 |
| BseBI | CCWGG | 7 cut(s) | 449, 524, 717, 1214, 1464, 1624, 1680 |
| BseCI | ATCGAT | 1 cut(s) | 123 |
| BseGI | GGATG | 8 cut(s) | 284, 882, 1491, 1675, 1695, 1740, 1823, 1985 |
| BseJI | GATNNNNATC | 1 cut(s) | 1436 |
| BseMI | GCAATG | 1 cut(s) | 1411 |
| BseMII | CTCAG | 5 cut(s) | 1146, 1294, 1335, 1628, 2459 |
| BseNI | ACTGG | 6 cut(s) | 431, 590, 1095, 1247, 1269, 2293 |
| BseRI | GAGGAG | 2 cut(s) | 1082, 1602 |
| BseSI | GKGCMC | 7 cut(s) | 276, 416, 593, 682, 1202, 2277, 2640 |
| BseX3I | CGGCCG | 1 cut(s) | 871 |
| BseXI | GCAGC | 6 cut(s) | 493, 741, 826, 942, 2258, 2677 |
| BseYI | CCCAGC | 3 cut(s) | 267, 460, 1338 |
| BsgI | GTGCAG | 3 cut(s) | 1639, 2265, 2684 |
| Bsh1236I | CGCG | 7 cut(s) | 492, 533, 621, 913, 1127, 1940, 1953 |
| Bsh1285I | CGRYCG | 1 cut(s) | 874 |
| BshNI | GGYRCC | 1 cut(s) | 370 |
| BshTI | ACCGGT | 1 cut(s) | 367 |
| BshVI | ATCGAT | 1 cut(s) | 123 |
| BsiEI | CGRYCG | 1 cut(s) | 874 |
| BsiHKAI | GWGCWC | 5 cut(s) | 276, 645, 1202, 1452, 2595 |
| BsiHKCI | CYCGRG | 1 cut(s) | 857 |
| BslFI | GGGAC | 4 cut(s) | 389, 1196, 1334, 2371 |
| BsmAI | GTCTC | 5 cut(s) | 41, 607, 1319, 1546, 2411 |
| BsmBI | CGTCTC | 1 cut(s) | 41 |
| BsmFI | GGGAC | 4 cut(s) | 389, 1196, 1334, 2371 |
| Bso31I | GGTCTC | 1 cut(s) | 1319 |
| BsoBI | CYCGRG | 1 cut(s) | 857 |
| Bsp120I | GGGCCC | 3 cut(s) | 589, 678, 2636 |
| Bsp19I | CCATGG | 3 cut(s) | 288, 394, 474 |
| BspCNI | CTCAG | 5 cut(s) | 1145, 1293, 1336, 1627, 2460 |
| BspDI | ATCGAT | 1 cut(s) | 123 |
| BspFNI | CGCG | 7 cut(s) | 492, 533, 621, 913, 1127, 1940, 1953 |
| BspHI | TCATGA | 3 cut(s) | 1063, 1554, 1996 |
| BspMI | ACCTGC | 3 cut(s) | 720, 1183, 2342 |
| BspPI | GGATC | 8 cut(s) | 90, 665, 834, 1445, 1634, 1954, 2372, 2614 |
| BspQI | GCTCTTC | 1 cut(s) | 2469 |
| BspT107I | GGYRCC | 1 cut(s) | 370 |
| BspTNI | GGTCTC | 1 cut(s) | 1319 |
| BsrBI | CCGCTC | 3 cut(s) | 66, 376, 675 |
| BsrDI | GCAATG | 1 cut(s) | 1411 |
| BsrFI | RCCGGY | 5 cut(s) | 367, 443, 1709, 1924, 2053 |
| BsrI | ACTGG | 6 cut(s) | 431, 590, 1095, 1247, 1269, 2293 |
| BssAI | RCCGGY | 5 cut(s) | 367, 443, 1709, 1924, 2053 |
| BssNAI | GTATAC | 1 cut(s) | 1110 |
| BssNI | GRCGYC | 3 cut(s) | 42, 57, 1055 |
| BssSI | CACGAG | 4 cut(s) | 742, 1087, 1155, 1973 |
| BssT1I | CCWWGG | 4 cut(s) | 288, 394, 408, 474 |
| Bst1107I | GTATAC | 1 cut(s) | 1110 |
| Bst2BI | CACGAG | 4 cut(s) | 742, 1087, 1155, 1973 |
| Bst2UI | CCWGG | 7 cut(s) | 449, 524, 717, 1214, 1464, 1624, 1680 |
| Bst4CI | ACNGT | 5 cut(s) | 433, 1587, 2447, 2452, 2615 |
| Bst6I | CTCTTC | 3 cut(s) | 1529, 1722, 2469 |
| BstACI | GRCGYC | 3 cut(s) | 42, 57, 1055 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 820, 1719, 2100 |
| BstBAI | YACGTR | 3 cut(s) | 417, 506, 1188 |
| BstDEI | CTNAG | 6 cut(s) | 1132, 1280, 1344, 1614, 2468, 2493 |
| BstDSI | CCRYGG | 7 cut(s) | 102, 288, 352, 394, 432, 474, 2293 |
| BstEII | GGTNACC | 2 cut(s) | 439, 1795 |
| BstF5I | GGATG | 8 cut(s) | 284, 882, 1491, 1675, 1695, 1740, 1823, 1985 |
| BstFNI | CGCG | 7 cut(s) | 492, 533, 621, 913, 1127, 1940, 1953 |
| BstH2I | RGCGCY | 1 cut(s) | 1689 |
| BstHHI | GCGC | 5 cut(s) | 533, 621, 669, 1688, 1942 |
| BstMAI | GTCTC | 5 cut(s) | 41, 607, 1319, 1546, 2411 |
| BstMCI | CGRYCG | 1 cut(s) | 874 |
| BstNI | CCWGG | 7 cut(s) | 449, 524, 717, 1214, 1464, 1624, 1680 |
| BstNSI | RCATGY | 4 cut(s) | 802, 968, 2107, 2634 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 524 |
| BstPI | GGTNACC | 2 cut(s) | 439, 1795 |
| BstSFI | CTRYAG | 1 cut(s) | 1777 |
| BstSLI | GKGCMC | 7 cut(s) | 276, 416, 593, 682, 1202, 2277, 2640 |
| BstUI | CGCG | 7 cut(s) | 492, 533, 621, 913, 1127, 1940, 1953 |
| BstV1I | GCAGC | 6 cut(s) | 493, 741, 826, 942, 2258, 2677 |
| BstV2I | GAAGAC | 2 cut(s) | 2040, 2418 |
| BstX2I | RGATCY | 3 cut(s) | 82, 657, 1959 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1682 |
| BstYI | RGATCY | 3 cut(s) | 82, 657, 1959 |
| BstZ17I | GTATAC | 1 cut(s) | 1110 |
| BstZI | CGGCCG | 1 cut(s) | 871 |
| Bsu15I | ATCGAT | 1 cut(s) | 123 |
| BsuTUI | ATCGAT | 1 cut(s) | 123 |
| BtgI | CCRYGG | 7 cut(s) | 102, 288, 352, 394, 432, 474, 2293 |
| BtgZI | GCGATG | 1 cut(s) | 779 |
| BtrI | CACGTC | 3 cut(s) | 258, 640, 2002 |
| BtsCI | GGATG | 8 cut(s) | 284, 882, 1491, 1675, 1695, 1740, 1823, 1985 |
| BtsI | GCAGTG | 1 cut(s) | 1314 |
| BtsIMutI | CAGTG | 4 cut(s) | 1262, 1314, 1583, 2286 |
| BveI | ACCTGC | 3 cut(s) | 720, 1183, 2342 |
| CciI | TCATGA | 3 cut(s) | 1063, 1554, 1996 |
| CfoI | GCGC | 5 cut(s) | 533, 621, 669, 1688, 1942 |
| Cfr10I | RCCGGY | 5 cut(s) | 367, 443, 1709, 1924, 2053 |
| Cfr9I | CCCGGG | 1 cut(s) | 857 |
| ClaI | ATCGAT | 1 cut(s) | 123 |
| CseI | GACGC | 6 cut(s) | 46, 50, 137, 919, 1063, 1924 |
| Csp6I | GTAC | 8 cut(s) | 187, 736, 796, 1003, 1129, 1240, 2284, 2448 |
| CspAI | ACCGGT | 1 cut(s) | 367 |
| CviQI | GTAC | 8 cut(s) | 187, 736, 796, 1003, 1129, 1240, 2284, 2448 |
| DdeI | CTNAG | 6 cut(s) | 1132, 1280, 1344, 1614, 2468, 2493 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1059 |
| EaeI | YGGCCR | 4 cut(s) | 871, 1488, 1977, 2290 |
| EagI | CGGCCG | 1 cut(s) | 871 |
| Eam1104I | CTCTTC | 3 cut(s) | 1529, 1722, 2469 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1059 |
| EarI | CTCTTC | 3 cut(s) | 1529, 1722, 2469 |
| EciI | GGCGGA | 3 cut(s) | 284, 443, 1609 |
| EclXI | CGGCCG | 1 cut(s) | 871 |
| Eco130I | CCWWGG | 4 cut(s) | 288, 394, 408, 474 |
| Eco24I | GRGCYC | 4 cut(s) | 593, 682, 2211, 2640 |
| Eco31I | GGTCTC | 1 cut(s) | 1319 |
| Eco52I | CGGCCG | 1 cut(s) | 871 |
| Eco57I | CTGAAG | 2 cut(s) | 1011, 2013 |
| Eco72I | CACGTG | 3 cut(s) | 417, 506, 1188 |
| Eco88I | CYCGRG | 1 cut(s) | 857 |
| Eco91I | GGTNACC | 2 cut(s) | 439, 1795 |
| EcoO109I | RGGNCCY | 8 cut(s) | 589, 590, 678, 679, 709, 1276, 2404, 2637 |
| EcoO65I | GGTNACC | 2 cut(s) | 439, 1795 |
| EcoRII | CCWGG | 7 cut(s) | 447, 522, 715, 1212, 1462, 1622, 1678 |
| EcoT14I | CCWWGG | 4 cut(s) | 288, 394, 408, 474 |
| EcoT38I | GRGCYC | 4 cut(s) | 593, 682, 2211, 2640 |
| ErhI | CCWWGG | 4 cut(s) | 288, 394, 408, 474 |
| Esp3I | CGTCTC | 1 cut(s) | 41 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2156, 2188 |
| FaqI | GGGAC | 4 cut(s) | 389, 1196, 1334, 2371 |
| FauI | CCCGC | 8 cut(s) | 347, 526, 601, 647, 668, 906, 1133, 2100 |
| FbaI | TGATCA | 1 cut(s) | 2649 |
| FblI | GTMKAC | 2 cut(s) | 1109, 2454 |
| FokI | GGATG | 8 cut(s) | 271, 889, 1498, 1662, 1682, 1727, 1810, 1972 |
| FriOI | GRGCYC | 4 cut(s) | 593, 682, 2211, 2640 |
| FspBI | CTAG | 2 cut(s) | 221, 1205 |
| GlaI | GCGC | 5 cut(s) | 532, 620, 668, 1687, 1941 |
| GsaI | CCCAGC | 3 cut(s) | 271, 464, 1342 |
| GsuI | CTGGAG | 1 cut(s) | 1286 |
| HaeII | RGCGCY | 1 cut(s) | 1689 |
| HgaI | GACGC | 6 cut(s) | 46, 50, 137, 919, 1063, 1924 |
| HhaI | GCGC | 5 cut(s) | 533, 621, 669, 1688, 1942 |
| Hin1I | GRCGYC | 3 cut(s) | 42, 57, 1055 |
| Hin6I | GCGC | 5 cut(s) | 531, 619, 667, 1686, 1940 |
| HinP1I | GCGC | 5 cut(s) | 531, 619, 667, 1686, 1940 |
| HincII | GTYRAC | 1 cut(s) | 2311 |
| HindII | GTYRAC | 1 cut(s) | 2311 |
| HindIII | AAGCTT | 2 cut(s) | 2096, 2336 |
| HinfI | GANTC | 8 cut(s) | 600, 917, 1072, 1508, 1514, 1817, 2228, 2702 |
| HphI | GGTGA | 9 cut(s) | 22, 292, 433, 463, 574, 892, 1177, 2177, 2563 |
| Hpy166II | GTNNAC | 9 cut(s) | 274, 471, 1092, 1110, 1200, 2185, 2286, 2311, 2455 |
| Hpy188III | TCNNGA | 9 cut(s) | 16, 38, 1064, 1531, 1555, 1597, 1997, 2164, 2600 |
| Hpy8I | GTNNAC | 9 cut(s) | 274, 471, 1092, 1110, 1200, 2185, 2286, 2311, 2455 |
| HpyAV | CCTTC | 7 cut(s) | 79, 325, 541, 2037, 2395, 2537, 2606 |
| HpyCH4III | ACNGT | 5 cut(s) | 433, 1587, 2447, 2452, 2615 |
| HpyCH4IV | ACGT | 8 cut(s) | 257, 384, 416, 505, 639, 687, 1187, 2001 |
| HpyF3I | CTNAG | 6 cut(s) | 1132, 1280, 1344, 1614, 2468, 2493 |
| HpySE526I | ACGT | 8 cut(s) | 257, 384, 416, 505, 639, 687, 1187, 2001 |
| Hsp92I | GRCGYC | 3 cut(s) | 42, 57, 1055 |
| HspAI | GCGC | 5 cut(s) | 531, 619, 667, 1686, 1940 |
| KroI | GCCGGC | 1 cut(s) | 1709 |
| KroNI | GCCGGC | 1 cut(s) | 1711 |
| Ksp22I | TGATCA | 1 cut(s) | 2649 |
| LguI | GCTCTTC | 1 cut(s) | 2469 |
| LmnI | GCTCC | 7 cut(s) | 71, 381, 478, 550, 701, 976, 2590 |
| Lsp1109I | GCAGC | 6 cut(s) | 493, 741, 826, 942, 2258, 2677 |
| LweI | GCATC | 5 cut(s) | 810, 906, 1704, 1726, 2473 |
| MaeI | CTAG | 2 cut(s) | 221, 1205 |
| MaeII | ACGT | 8 cut(s) | 257, 384, 416, 505, 639, 687, 1187, 2001 |
| MbiI | CCGCTC | 3 cut(s) | 66, 376, 675 |
| MfeI | CAATTG | 3 cut(s) | 1381, 2085, 2130 |
| MflI | RGATCY | 3 cut(s) | 82, 657, 1959 |
| MlsI | TGGCCA | 2 cut(s) | 1490, 1979 |
| MluI | ACGCGT | 1 cut(s) | 1125 |
| MluNI | TGGCCA | 2 cut(s) | 1490, 1979 |
| MlyI | GAGTC | 3 cut(s) | 609, 1811, 2222 |
| MmeI | TCCRAC | 5 cut(s) | 174, 240, 630, 1463, 1542 |
| Mox20I | TGGCCA | 2 cut(s) | 1490, 1979 |
| MroNI | GCCGGC | 1 cut(s) | 1709 |
| MscI | TGGCCA | 2 cut(s) | 1490, 1979 |
| MseI | TTAA | 3 cut(s) | 197, 1023, 1929 |
| MslI | CAYNNNNRTG | 9 cut(s) | 368, 746, 969, 1370, 1647, 1680, 1844, 2072, 2629 |
| Msp20I | TGGCCA | 2 cut(s) | 1490, 1979 |
| MspA1I | CMGCKG | 2 cut(s) | 267, 817 |
| MunI | CAATTG | 3 cut(s) | 1381, 2085, 2130 |
| MvaI | CCWGG | 7 cut(s) | 449, 524, 717, 1214, 1464, 1624, 1680 |
| MvnI | CGCG | 7 cut(s) | 492, 533, 621, 913, 1127, 1940, 1953 |
| NaeI | GCCGGC | 1 cut(s) | 1711 |
| NciI | CCSGG | 5 cut(s) | 177, 466, 858, 859, 2362 |
| NcoI | CCATGG | 3 cut(s) | 288, 394, 474 |
| NgoMIV | GCCGGC | 1 cut(s) | 1709 |
| NmeAIII | GCCGAG | 1 cut(s) | 730 |
| NmuCI | GTSAC | 8 cut(s) | 439, 501, 517, 1150, 1165, 1260, 2214, 2297 |
| NspI | RCATGY | 4 cut(s) | 802, 968, 2107, 2634 |
| OliI | CACNNNNGTG | 2 cut(s) | 368, 746 |
| PaeI | GCATGC | 1 cut(s) | 2107 |
| PagI | TCATGA | 3 cut(s) | 1063, 1554, 1996 |
| PaqCI | CACCTGC | 2 cut(s) | 1183, 2342 |
| PciSI | GCTCTTC | 1 cut(s) | 2469 |
| PcsI | WCGNNNNNNNCGW | 6 cut(s) | 120, 159, 693, 702, 744, 1049 |
| PdiI | GCCGGC | 1 cut(s) | 1711 |
| PfeI | GAWTC | 5 cut(s) | 917, 1072, 1508, 1514, 2702 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 400, 2044 |
| PinAI | ACCGGT | 1 cut(s) | 367 |
| PleI | GAGTC | 3 cut(s) | 608, 1811, 2222 |
| PmaCI | CACGTG | 3 cut(s) | 417, 506, 1188 |
| PmlI | CACGTG | 3 cut(s) | 417, 506, 1188 |
| PpsI | GAGTC | 3 cut(s) | 608, 1811, 2222 |
| Ppu21I | YACGTR | 3 cut(s) | 417, 506, 1188 |
| PpuMI | RGGWCCY | 3 cut(s) | 709, 1276, 2404 |
| PshAI | GACNNNNGTC | 1 cut(s) | 524 |
| PsiI | TTATAA | 1 cut(s) | 939 |
| Psp5II | RGGWCCY | 3 cut(s) | 709, 1276, 2404 |
| Psp6I | CCWGG | 7 cut(s) | 447, 522, 715, 1212, 1462, 1622, 1678 |
| PspCI | CACGTG | 3 cut(s) | 417, 506, 1188 |
| PspEI | GGTNACC | 2 cut(s) | 439, 1795 |
| PspFI | CCCAGC | 3 cut(s) | 267, 460, 1338 |
| PspGI | CCWGG | 7 cut(s) | 447, 522, 715, 1212, 1462, 1622, 1678 |
| PspOMI | GGGCCC | 3 cut(s) | 589, 678, 2636 |
| PspPPI | RGGWCCY | 3 cut(s) | 709, 1276, 2404 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2492, 2524 |
| PsuI | RGATCY | 3 cut(s) | 82, 657, 1959 |
| PvuII | CAGCTG | 2 cut(s) | 267, 817 |
| RsaI | GTAC | 8 cut(s) | 188, 737, 797, 1004, 1130, 1241, 2285, 2449 |
| RsaNI | GTAC | 8 cut(s) | 187, 736, 796, 1003, 1129, 1240, 2284, 2448 |
| RseI | CAYNNNNRTG | 9 cut(s) | 368, 746, 969, 1370, 1647, 1680, 1844, 2072, 2629 |
| SapI | GCTCTTC | 1 cut(s) | 2469 |
| SaqAI | TTAA | 3 cut(s) | 197, 1023, 1929 |
| ScaI | AGTACT | 1 cut(s) | 1241 |
| SchI | GAGTC | 3 cut(s) | 609, 1811, 2222 |
| SfaNI | GCATC | 5 cut(s) | 810, 906, 1704, 1726, 2473 |
| SfcI | CTRYAG | 1 cut(s) | 1777 |
| SgrAI | CRCCGGYG | 1 cut(s) | 367 |
| SmaI | CCCGGG | 1 cut(s) | 859 |
| SmiMI | CAYNNNNRTG | 9 cut(s) | 368, 746, 969, 1370, 1647, 1680, 1844, 2072, 2629 |
| SmlI | CTYRAG | 4 cut(s) | 644, 1529, 1769, 2388 |
| SmoI | CTYRAG | 4 cut(s) | 644, 1529, 1769, 2388 |
| SphI | GCATGC | 1 cut(s) | 2107 |
| SspMI | CTAG | 2 cut(s) | 221, 1205 |
| StyI | CCWWGG | 4 cut(s) | 288, 394, 408, 474 |
| TaaI | ACNGT | 5 cut(s) | 433, 1587, 2447, 2452, 2615 |
| TaiI | ACGT | 8 cut(s) | 260, 387, 419, 508, 642, 690, 1190, 2004 |
| TaqI | TCGA | 9 cut(s) | 39, 117, 123, 230, 696, 776, 1393, 1446, 1596 |
| TaqII | GACCGA | 1 cut(s) | 1033 |
| TatI | WGTACW | 2 cut(s) | 1239, 2283 |
| TauI | GCSGC | 8 cut(s) | 183, 376, 459, 624, 631, 726, 729, 873 |
| TfiI | GAWTC | 5 cut(s) | 917, 1072, 1508, 1514, 2702 |
| Tru1I | TTAA | 3 cut(s) | 197, 1023, 1929 |
| Tru9I | TTAA | 3 cut(s) | 197, 1023, 1929 |
| TscAI | CASTG | 4 cut(s) | 1269, 1314, 1590, 2293 |
| TseFI | GTSAC | 8 cut(s) | 439, 501, 517, 1150, 1165, 1260, 2214, 2297 |
| TseI | GCWGC | 6 cut(s) | 481, 729, 814, 955, 2246, 2665 |
| Tsp45I | GTSAC | 8 cut(s) | 439, 501, 517, 1150, 1165, 1260, 2214, 2297 |
| TspGWI | ACGGA | 1 cut(s) | 1191 |
| TspMI | CCCGGG | 1 cut(s) | 857 |
| TspRI | CASTG | 4 cut(s) | 1269, 1314, 1590, 2293 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 400, 2044 |
| VneI | GTGCAC | 2 cut(s) | 272, 1198 |
| XapI | RAATTY | 1 cut(s) | 2192 |
| XceI | RCATGY | 4 cut(s) | 802, 968, 2107, 2634 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2380 |
| XmaI | CCCGGG | 1 cut(s) | 857 |
| XmiI | GTMKAC | 2 cut(s) | 1109, 2454 |
| XspI | CTAG | 2 cut(s) | 221, 1205 |
| ZrmI | AGTACT | 1 cut(s) | 1241 |