Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0010866

Physical Location & Seq

Genomic Coordinates Forward (+)

69262132 .. 69267205

Gene Structure 5074 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG513400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2718 bp

ATGGCAGCCTCAGTCCAGAACCGGCAGTTTCCTCACATCGACCCCGCCTTAAACGGCGTCGTCCGCTCCTCTTTCAAATCAAGTACTCCCAACCGCCACTTCCAAGACATCACTACTCCCCCGAAAAGCTCCGCCCCGAATGATGACTACGACGAGTCGTCCTCCAGCGACGACGAAAACGACGAGAGCATCGTAGAGTACATGGATTTGGTCCGGAGAGGCAACAGAGAATTAGAGCCGTCCATCTTGGACCCCAGAGATGAGGCCACGTCGGACAGCTGGGTGGAGCGCAACCCCAGCATGGTCCGCCTCACAGGGAAACACCCCTTCAACTCGGAGCCGCCGCTCAGCCGGCTCATGCACCACGGCTTCATCACTCCGGTTCCACTGCACTACGTCCGCAACCACGGCGTCGTCCCCAAGGCCACGTGGCACGACTGGACCGTCGAGATCACCGGCCTCGTCAAGCGGCCCGCCCGGTTCACCATGGACCAGCTCACCACCGAGTTTCGCGCCCGCGAGCTCCCCGTCACCCTCGTTTGCGCGGGAAACCGCCGCAAGGAGCAGAACATGGTGAAGCAGACCGTCGGCTTCAACTGGGGCGCCGCCGGCATCTCCACCTCCGTCTGGCGCGGCGTGCGCCTCCGCGACGTCCTCAAGCGGTGCGGGATCTACAGCCGCAAAGGCGGCGCCCTCAACGTCTGCTTCGAAGGCGCCGAGGACCTGCCAGGTGGAGGTGGCTCCAAGTACGCCACCAGTCTGAGAAAAGAGATCGCCATGGACGAGAGCAGGGATATCATACTTGCTTTCATGCAAAACGGCGAGCGTTTGGCCCCCGATCACGGCTTTCCGGTTCGGGTGATCATACCCGGTTTTATAGGGGGCCGGATGGTGAAATGGCTCAAACGCATCGTCGTGACGACGAAGGAGTCGGACTGTTATTATCATTACAAGGACAACAGGGTCCTTCCCTCGCATGTTGATGCCGAGCTGGCCAACGCTGAAGCATGGTGGTACAAGCCGGAGTACATAATCAACGAGCTGAACATAAACTCGGTCATTACGACGCCGTCTCACGAGGAGATATTGTCGATAAACTCGTGGACGAGGCCGTACACCCTCAAAGGCTACGCATATTCCGGAGGGGGTAAGAAAGTGACACGAGTGGAGGTGACTCTGGACGGTGGGGAGACCTGGCACGTCTGCAGTCTGGACCACCAAGAGAAGCCGAACAAGTACGGGAAATACTGGTGCTGGTGCTTCTGGTCACTGGAGGTGGAAGTGCTCAACTTATTGGTAGCCAAAGAGATTGCGGTGCGGGCTTGGGACGAAACCCACAACACTCAACCCGAAAAGCTCATCTGGAATGTCATGGGAATGATGAACAACTGTTGGTTCCGAGTGAAAATCAATGTGTTGCCACACAGAGGTGAGATTGGAATAGTGTTTGAGCATCCAACCAAACCCGGAAACCAATCAGGTGGGTGGATGGCAAAAGAGAGACGCTTGGAGACCGAATCCAACGCAACCCTCAAGAAGAGTGTCTCTTCACCCTTCATGAACACTTCATCCAAGGTCTACTCAATGTCCGAAGTCAAGAGGCATAACACCCCTCAGTCTACATGGATTGTTGTCCACGGTCACGTCTACGACTGCACTAGATTCCTCAATGACCACCCCGGTGGTGCTGATAGCATTTTGATCAATGCTGGAACAGATTGCACCGAAGAGTTTGAAGCAATCCATTCCGACAAGGCCAAGAAAATGCTTGAGGAATATAGAATAGGCGAGGTGGTCGGTACCACAGGTTACGCCTCGGACTCTAGCTCCCCTAATAATACCGTCCATGGGCCACCAAGAATATCAACTGTGGATTCTATGTCTTCTCTTACGAATTTTTTGGCTCCTATCAAAGAAATCACACTAAAAAGCGTCGCGCTCAATCCACGTGAGAAAATTCCATGCAAGCTTGTGACCAAGACCTCGATTTCACATGACGTGAGGGTATTCAGATTTGCATTGCCTTCAGAAGACCAAGGTCTAGGGTTGCCAGTGGGCAAGCACATATTCTTGTGTGCTACAATTGAGGGCAAGCTTTGCATGAGGGCTTACACACCAACCAGCTCGATTGATGAAGTTGGGTATTTTGATCTCGTGGTCAAGGTCTACTTTAAGAATGTGCACCCTCGGTTCCCTAATGGTGGGCTCATGTCACAGTACTTGGACTCTCTCCCAATCGGGTCGGCTCTAGACGTGAAGGGTCCATTGGGTCACGTAGAGTACAACGGTAAAGGTAACTTTTTGGTCCACGGTAAACCCAAATTTGCAAAGAAACTCGCCATGATTGCCGGAGGGACGGGGATCACACCCATTTACCAAGTAGCACAAGCCATCCTGAAAGACCCGGAGGACGACACCGAAATGCACGTCGTATATGCAAACCGAACCGAAGAGGACATTTTGTTGAGGGAAGAGCTTGATGGTTGGGCCAAGGAGCATGAGAGGTTCAATGTGTGGTATGTGGTGGAGAATGGTAAGGAAGGCTGGGAATACAGTGTGGGATTCATCACGGAGAGTATACTGAGGGAGCATGTTCCCGATGGATCGGACGGTTCTCTTGCGTTGGCGTGCGGGCCCCCACCGATGATTCAGTTTGCCGTGCAGCCCAATCTGGAGAAGATGAACTATGATGTCAAGAATTCGTTGCTGATATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0005886 GO:0006082 GO:0006807 GO:0006809 GO:0008150 GO:0008152 GO:0008940 GO:0009058 GO:0009314 GO:0009416 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009628 GO:0009703 GO:0009987 GO:0016020 GO:0016491 GO:0016661 GO:0017144 GO:0034641 GO:0042126 GO:0042128 GO:0042133 GO:0042136 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046209 GO:0046857 GO:0050896 GO:0051704 GO:0051707 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:0071941 GO:0071944 GO:0072593 GO:1903409 GO:2001057

KEGG Pathways

Metabolic & Signaling

ko00910 ko01120 map00910 map01120

Pfam Domains

Protein Families

Cyt-b5 FAD_binding_6 Mo-co_dimer NAD_binding_1 Oxidored_molyb

Protein Analysis

905

Amino Acids

101.71

Weight (kDa)

6.47

Isoelectric Point (pI)

41.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Oxidored_molyb	PF00174	136 - 315	6.4e-55	Oxidoreductase molybdopterin binding domain
Mo-co_dimer	PF03404	343 - 472	6.5e-58	Mo-co oxidoreductase dimerisation domain
Cyt-b5	PF00173	529 - 598	1.8e-27	Cytochrome b5-like Heme/Steroid binding domain
FAD_binding_6	PF00970	655 - 761	3.4e-37	Oxidoreductase FAD-binding domain
NAD_binding_1	PF00175	781 - 887	1.3e-34	Oxidoreductase NAD-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010866)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G37130 AT1G77760
fragaria_vesca	FvH4_5g39010
malus_domestica	MD08G1172400.v1.1 MD15G1357900.v1.1
prunus_persica	Prupe.1G505400_v2.0.a1
pyrus_communis	pycom08g14700 pycom15g32000
rosa_chinensis	RchiOBHm_Chr7g0240971
rosa_laevigata	RLG00000000608
rosa_multiflora	Rmu_co8418311.1_g000001 Rmu_sc0041887.1_g000001 Rmu_ssc0000392.1_g000001
rosa_roxburghii	Rroxscaffold_3G00219350
rosa_rugosa	Rorug07G0341100
rosa_samantha	Rh7AG495900 Rh7BG467400 Rh7CG513400 Rh7DG480400
rosa_wichuraiana	Rw7G041900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	443, 928, 962
AatII	GACGTC	1 cut(s)	654
Acc36I	ACCTGC	1 cut(s)	732
Acc65I	GGTACC	1 cut(s)	1799
AccB1I	GGYRCC	4 cut(s)	602, 689, 713, 1799
AccBSI	CCGCTC	2 cut(s)	66, 346
AccI	GTMKAC	5 cut(s)	1578, 1619, 1647, 2166, 2578
AccII	CGCG	6 cut(s)	513, 519, 545, 633, 648, 1937
AccIII	TCCGGA	2 cut(s)	213, 1139
AclWI	GGATC	3 cut(s)	677, 2369, 2611
AcoI	YGGCCR	1 cut(s)	993
AcsI	RAATTY	4 cut(s)	1894, 1956, 2321, 2698
AcuI	CTGAAG	2 cut(s)	1023, 2010
AcvI	CACGTG	2 cut(s)	429, 1949
AcyI	GRCGYC	7 cut(s)	57, 411, 603, 651, 690, 714, 1067
AfiI	CCNNNNNNNGG	8 cut(s)	301, 559, 627, 734, 842, 1427, 1848, 2201
AgsI	TTSAA	5 cut(s)	76, 331, 595, 1736, 2509
AhdI	GACNNNNNGTC	1 cut(s)	157
AjiI	CACGTC	6 cut(s)	270, 1201, 1645, 1999, 2254, 2428
AjnI	CCWGG	2 cut(s)	727, 1193
AjuI	GAANNNNNNNTTGG	4 cut(s)	83, 115, 2249, 2281
AleI	CACNNNNGTG	2 cut(s)	1428, 1680
AloI	GAACNNNNNNTCC	2 cut(s)	1553, 1585
Alw21I	GWGCWC	3 cut(s)	525, 1287, 2184
Alw26I	GTCTC	5 cut(s)	1077, 1184, 1495, 1505, 1549
Alw44I	GTGCAC	1 cut(s)	2180
AlwI	GGATC	3 cut(s)	677, 2369, 2611
Aor13HI	TCCGGA	2 cut(s)	213, 1139
ApaI	GGGCCC	1 cut(s)	2637
ApaLI	GTGCAC	1 cut(s)	2180
ApeKI	GCWGC	2 cut(s)	5, 2662
ApoI	RAATTY	4 cut(s)	1894, 1956, 2321, 2698
ArsI	GACNNNNNNTTYG	4 cut(s)	897, 929, 2412, 2444
Asp718I	GGTACC	1 cut(s)	1799
AspLEI	GCGC	9 cut(s)	291, 515, 545, 605, 633, 642, 692, 716, 1939
AsuC2I	CCSGG	5 cut(s)	478, 870, 1467, 1680, 2405
AsuII	TTCGAA	1 cut(s)	708
BaeGI	GKGCMC	2 cut(s)	2184, 2637
BalI	TGGCCA	1 cut(s)	995
BanI	GGYRCC	4 cut(s)	602, 689, 713, 1799
BanII	GRGCYC	3 cut(s)	525, 2208, 2637
BauI	CACGAG	4 cut(s)	1076, 1099, 1161, 2153
BbrPI	CACGTG	2 cut(s)	429, 1949
BbsI	GAAGAC	2 cut(s)	1875, 2037
Bbv12I	GWGCWC	3 cut(s)	525, 1287, 2184
BbvI	GCAGC	2 cut(s)	17, 2674
BccI	CCATC	6 cut(s)	251, 883, 1483, 2399, 2474, 2594
BceAI	ACGGC	9 cut(s)	70, 223, 382, 424, 835, 859, 1054, 1096, 2642
BciT130I	CCWGG	2 cut(s)	729, 1195
BclI	TGATCA	2 cut(s)	861, 1701
BcnI	CCSGG	5 cut(s)	478, 870, 1467, 1680, 2405
BcoDI	GTCTC	5 cut(s)	1077, 1184, 1495, 1505, 1549
BfaI	CTAG	4 cut(s)	1659, 1824, 2042, 2249
BfmI	CTRYAG	2 cut(s)	673, 1204
BfoI	RGCGCY	3 cut(s)	606, 693, 717
BfuAI	ACCTGC	1 cut(s)	732
BglI	GCCNNNNNGGC	2 cut(s)	684, 992
BlpI	GCTNAGC	1 cut(s)	347
BmcAI	AGTACT	2 cut(s)	85, 2219
Bme1390I	CCNGG	7 cut(s)	478, 729, 870, 1195, 1467, 1680, 2405
BmeRI	GACNNNNNGTC	1 cut(s)	157
BmgBI	CACGTC	6 cut(s)	270, 1201, 1645, 1999, 2254, 2428
BmrFI	CCNGG	7 cut(s)	478, 729, 870, 1195, 1467, 1680, 2405
BmrI	ACTGGG	1 cut(s)	607
BmsI	GCATC	5 cut(s)	198, 621, 918, 973, 1462
BmuI	ACTGGG	1 cut(s)	607
BoxI	GACNNNNGTC	1 cut(s)	2037
BpiI	GAAGAC	2 cut(s)	1875, 2037
BplI	GAGNNNNNCTC	2 cut(s)	146, 178
BpmI	CTGGAG	3 cut(s)	148, 1292, 2693
Bpu1102I	GCTNAGC	1 cut(s)	347
Bpu14I	TTCGAA	1 cut(s)	708
BpuEI	CTTGAG	3 cut(s)	641, 1517, 1790
BpuMI	CCSGG	5 cut(s)	478, 870, 1467, 1680, 2405
BsaAI	YACGTR	3 cut(s)	429, 1949, 2275
BsaHI	GRCGYC	7 cut(s)	57, 411, 603, 651, 690, 714, 1067
BsaI	GGTCTC	2 cut(s)	1184, 1505
BsaWI	WCCGGW	4 cut(s)	213, 379, 850, 1139
BsaXI	ACNNNNNCTCC	4 cut(s)	1073, 1103, 1811, 1841
Bsc4I	CCNNNNNNNGG	8 cut(s)	301, 559, 627, 734, 842, 1427, 1848, 2201
Bse118I	RCCGGY	4 cut(s)	21, 351, 455, 608
Bse1I	ACTGG	6 cut(s)	443, 602, 756, 1253, 1275, 2051
Bse3DI	GCAATG	1 cut(s)	2018
BseAI	TCCGGA	2 cut(s)	213, 1139
BseBI	CCWGG	2 cut(s)	729, 1195
BseGI	GGATG	5 cut(s)	894, 1453, 1494, 1568, 2391
BseLI	CCNNNNNNNGG	8 cut(s)	301, 559, 627, 734, 842, 1427, 1848, 2201
BseMI	GCAATG	1 cut(s)	2018
BseMII	CTCAG	5 cut(s)	24, 361, 752, 1628, 2573
BseNI	ACTGG	6 cut(s)	443, 602, 756, 1253, 1275, 2051
BseRI	GAGGAG	2 cut(s)	58, 1094
BseSI	GKGCMC	2 cut(s)	2184, 2637
BseXI	GCAGC	2 cut(s)	17, 2674
BseYI	CCCAGC	3 cut(s)	279, 296, 2544
BsgI	GTGCAG	3 cut(s)	374, 1639, 2681
Bsh1236I	CGCG	6 cut(s)	513, 519, 545, 633, 648, 1937
BshNI	GGYRCC	4 cut(s)	602, 689, 713, 1799
BsiHKAI	GWGCWC	3 cut(s)	525, 1287, 2184
BslFI	GGGAC	3 cut(s)	401, 1340, 2368
BslI	CCNNNNNNNGG	8 cut(s)	301, 559, 627, 734, 842, 1427, 1848, 2201
BsmAI	GTCTC	5 cut(s)	1077, 1184, 1495, 1505, 1549
BsmBI	CGTCTC	2 cut(s)	1077, 1495
BsmFI	GGGAC	3 cut(s)	401, 1340, 2368
Bso31I	GGTCTC	2 cut(s)	1184, 1505
Bsp119I	TTCGAA	1 cut(s)	708
Bsp120I	GGGCCC	1 cut(s)	2633
Bsp1286I	GDGCHC	5 cut(s)	525, 1287, 2184, 2208, 2637
Bsp13I	TCCGGA	2 cut(s)	213, 1139
Bsp143I	GATC	9 cut(s)	450, 669, 771, 838, 861, 1701, 2149, 2361, 2603
Bsp1720I	GCTNAGC	1 cut(s)	347
Bsp19I	CCATGG	3 cut(s)	486, 777, 1846
BspCNI	CTCAG	5 cut(s)	23, 360, 753, 1627, 2574
BspEI	TCCGGA	2 cut(s)	213, 1139
BspFNI	CGCG	6 cut(s)	513, 519, 545, 633, 648, 1937
BspHI	TCATGA	1 cut(s)	1557
BspMAI	CTGCAG	1 cut(s)	1208
BspMI	ACCTGC	1 cut(s)	732
BspPI	GGATC	3 cut(s)	677, 2369, 2611
BspQI	GCTCTTC	1 cut(s)	2466
BspT104I	TTCGAA	1 cut(s)	708
BspT107I	GGYRCC	4 cut(s)	602, 689, 713, 1799
BspTNI	GGTCTC	2 cut(s)	1184, 1505
BsrBI	CCGCTC	2 cut(s)	66, 346
BsrDI	GCAATG	1 cut(s)	2018
BsrFI	RCCGGY	4 cut(s)	21, 351, 455, 608
BsrI	ACTGG	6 cut(s)	443, 602, 756, 1253, 1275, 2051
BssAI	RCCGGY	4 cut(s)	21, 351, 455, 608
BssMI	GATC	9 cut(s)	450, 669, 771, 838, 861, 1701, 2149, 2361, 2603
BssNAI	GTATAC	1 cut(s)	2579
BssNI	GRCGYC	7 cut(s)	57, 411, 603, 651, 690, 714, 1067
BssSI	CACGAG	4 cut(s)	1076, 1099, 1161, 2153
BssT1I	CCWWGG	7 cut(s)	420, 486, 777, 1572, 1846, 2035, 2490
Bst1107I	GTATAC	1 cut(s)	2579
Bst2BI	CACGAG	4 cut(s)	1076, 1099, 1161, 2153
Bst2UI	CCWGG	2 cut(s)	729, 1195
Bst6I	CTCTTC	5 cut(s)	1532, 1552, 1722, 2445, 2466
BstACI	GRCGYC	7 cut(s)	57, 411, 603, 651, 690, 714, 1067
BstAPI	GCANNNNNTGC	1 cut(s)	2097
BstBAI	YACGTR	3 cut(s)	429, 1949, 2275
BstBI	TTCGAA	1 cut(s)	708
BstDEI	CTNAG	5 cut(s)	10, 347, 761, 1614, 2582
BstDSI	CCRYGG	7 cut(s)	364, 406, 486, 777, 1636, 1846, 2308
BstF5I	GGATG	5 cut(s)	894, 1453, 1494, 1568, 2391
BstFNI	CGCG	6 cut(s)	513, 519, 545, 633, 648, 1937
BstH2I	RGCGCY	3 cut(s)	606, 693, 717
BstHHI	GCGC	9 cut(s)	291, 515, 545, 605, 633, 642, 692, 716, 1939
BstKTI	GATC	9 cut(s)	453, 672, 774, 841, 864, 1704, 2152, 2364, 2606
BstMAI	GTCTC	5 cut(s)	1077, 1184, 1495, 1505, 1549
BstMBI	GATC	9 cut(s)	450, 669, 771, 838, 861, 1701, 2149, 2361, 2603
BstNI	CCWGG	2 cut(s)	729, 1195
BstNSI	RCATGY	2 cut(s)	980, 2594
BstPAI	GACNNNNGTC	1 cut(s)	2037
BstSCI	CCNGG	7 cut(s)	476, 727, 868, 1193, 1465, 1678, 2403
BstSFI	CTRYAG	2 cut(s)	673, 1204
BstSLI	GKGCMC	2 cut(s)	2184, 2637
BstUI	CGCG	6 cut(s)	513, 519, 545, 633, 648, 1937
BstV1I	GCAGC	2 cut(s)	17, 2674
BstV2I	GAAGAC	2 cut(s)	1875, 2037
BstX2I	RGATCY	1 cut(s)	669
BstXI	CCANNNNNNTGG	2 cut(s)	1481, 1682
BstYI	RGATCY	1 cut(s)	669
BstZ17I	GTATAC	1 cut(s)	2579
BtgI	CCRYGG	7 cut(s)	364, 406, 486, 777, 1636, 1846, 2308
BtrI	CACGTC	6 cut(s)	270, 1201, 1645, 1999, 2254, 2428
BtsCI	GGATG	5 cut(s)	894, 1453, 1494, 1568, 2391
BtsI	GCAGTG	1 cut(s)	386
BtsIMutI	CAGTG	4 cut(s)	386, 1268, 2058, 2560
BveI	ACCTGC	1 cut(s)	732
CciI	TCATGA	1 cut(s)	1557
CfoI	GCGC	9 cut(s)	291, 515, 545, 605, 633, 642, 692, 716, 1939
Cfr10I	RCCGGY	4 cut(s)	21, 351, 455, 608
CseI	GACGC	5 cut(s)	46, 400, 1075, 1512, 1921
DdeI	CTNAG	5 cut(s)	10, 347, 761, 1614, 2582
DinI	GGCGCC	3 cut(s)	604, 691, 715
DpnI	GATC	9 cut(s)	452, 671, 773, 840, 863, 1703, 2151, 2363, 2605
DpnII	GATC	9 cut(s)	450, 669, 771, 838, 861, 1701, 2149, 2361, 2603
DrdI	GACNNNNNNGTC	3 cut(s)	443, 928, 962
DriI	GACNNNNNGTC	1 cut(s)	157
DseDI	GACNNNNNNGTC	3 cut(s)	443, 928, 962
EaeI	YGGCCR	1 cut(s)	993
Eam1104I	CTCTTC	5 cut(s)	1532, 1552, 1722, 2445, 2466
Eam1105I	GACNNNNNGTC	1 cut(s)	157
EarI	CTCTTC	5 cut(s)	1532, 1552, 1722, 2445, 2466
EciI	GGCGGA	2 cut(s)	121, 296
Ecl136II	GAGCTC	1 cut(s)	523
Eco130I	CCWWGG	7 cut(s)	420, 486, 777, 1572, 1846, 2035, 2490
Eco24I	GRGCYC	3 cut(s)	525, 2208, 2637
Eco31I	GGTCTC	2 cut(s)	1184, 1505
Eco32I	GATATC	1 cut(s)	796
Eco53kI	GAGCTC	1 cut(s)	523
Eco57I	CTGAAG	2 cut(s)	1023, 2010
Eco72I	CACGTG	2 cut(s)	429, 1949
EcoICRI	GAGCTC	1 cut(s)	523
EcoO109I	RGGNCCY	3 cut(s)	721, 964, 2634
EcoRI	GAATTC	1 cut(s)	2698
EcoRII	CCWGG	2 cut(s)	727, 1193
EcoRV	GATATC	1 cut(s)	796
EcoT14I	CCWWGG	7 cut(s)	420, 486, 777, 1572, 1846, 2035, 2490
EcoT38I	GRGCYC	3 cut(s)	525, 2208, 2637
EgeI	GGCGCC	3 cut(s)	604, 691, 715
EheI	GGCGCC	3 cut(s)	604, 691, 715
ErhI	CCWWGG	7 cut(s)	420, 486, 777, 1572, 1846, 2035, 2490
Esp3I	CGTCTC	2 cut(s)	1077, 1495
FalI	AAGNNNNNCTT	2 cut(s)	2153, 2185
FaqI	GGGAC	3 cut(s)	401, 1340, 2368
FauI	CCCGC	7 cut(s)	52, 481, 524, 538, 659, 1311, 2624
FbaI	TGATCA	2 cut(s)	861, 1701
FblI	GTMKAC	5 cut(s)	1578, 1619, 1647, 2166, 2578
FokI	GGATG	5 cut(s)	901, 1440, 1501, 1555, 2378
FriOI	GRGCYC	3 cut(s)	525, 2208, 2637
FspBI	CTAG	4 cut(s)	1659, 1824, 2042, 2249
GlaI	GCGC	9 cut(s)	290, 514, 544, 604, 632, 641, 691, 715, 1938
GsaI	CCCAGC	3 cut(s)	283, 300, 2548
GsuI	CTGGAG	3 cut(s)	148, 1292, 2693
HaeII	RGCGCY	3 cut(s)	606, 693, 717
HgaI	GACGC	5 cut(s)	46, 400, 1075, 1512, 1921
HhaI	GCGC	9 cut(s)	291, 515, 545, 605, 633, 642, 692, 716, 1939
Hin1I	GRCGYC	7 cut(s)	57, 411, 603, 651, 690, 714, 1067
Hin6I	GCGC	9 cut(s)	289, 513, 543, 603, 631, 640, 690, 714, 1937
HinP1I	GCGC	9 cut(s)	289, 513, 543, 603, 631, 640, 690, 714, 1937
HindIII	AAGCTT	2 cut(s)	1967, 2093
HpyAV	CCTTC	8 cut(s)	337, 704, 919, 977, 1564, 2034, 2251, 2534
HpyF3I	CTNAG	5 cut(s)	10, 347, 761, 1614, 2582
Hsp92I	GRCGYC	7 cut(s)	57, 411, 603, 651, 690, 714, 1067
HspAI	GCGC	9 cut(s)	289, 513, 543, 603, 631, 640, 690, 714, 1937
KasI	GGCGCC	3 cut(s)	602, 689, 713
Kpn2I	TCCGGA	2 cut(s)	213, 1139
KpnI	GGTACC	1 cut(s)	1803
KroI	GCCGGC	2 cut(s)	351, 608
KroNI	GCCGGC	2 cut(s)	353, 610
Ksp22I	TGATCA	2 cut(s)	861, 1701
Kzo9I	GATC	9 cut(s)	450, 669, 771, 838, 861, 1701, 2149, 2361, 2603
LguI	GCTCTTC	1 cut(s)	2466
Lsp1109I	GCAGC	2 cut(s)	17, 2674
LweI	GCATC	5 cut(s)	198, 621, 918, 973, 1462
MaeI	CTAG	4 cut(s)	1659, 1824, 2042, 2249
MalI	GATC	9 cut(s)	452, 671, 773, 840, 863, 1703, 2151, 2363, 2605
MbiI	CCGCTC	2 cut(s)	66, 346
MboI	GATC	9 cut(s)	450, 669, 771, 838, 861, 1701, 2149, 2361, 2603
MboII	GAAGA	8 cut(s)	1539, 1549, 1739, 1875, 2042, 2462, 2483, 2689
MfeI	CAATTG	1 cut(s)	2082
MflI	RGATCY	1 cut(s)	669
MhlI	GDGCHC	5 cut(s)	525, 1287, 2184, 2208, 2637
MlsI	TGGCCA	1 cut(s)	995
MluCI	AATT	6 cut(s)	230, 1894, 1956, 2082, 2321, 2698
MluNI	TGGCCA	1 cut(s)	995
Mly113I	GGCGCC	3 cut(s)	603, 690, 714
MlyI	GAGTC	5 cut(s)	164, 938, 1168, 1814, 2219
MmeI	TCCRAC	5 cut(s)	252, 912, 1481, 1545, 1773
Mox20I	TGGCCA	1 cut(s)	995
MroI	TCCGGA	2 cut(s)	213, 1139
MroNI	GCCGGC	2 cut(s)	351, 608
MscI	TGGCCA	1 cut(s)	995
MseI	TTAA	2 cut(s)	50, 2172
MslI	CAYNNNNRTG	6 cut(s)	914, 981, 1376, 1428, 1680, 2420
Msp20I	TGGCCA	1 cut(s)	995
MspA1I	CMGCKG	1 cut(s)	279
MspR9I	CCNGG	7 cut(s)	478, 729, 870, 1195, 1467, 1680, 2405
MunI	CAATTG	1 cut(s)	2082
MvaI	CCWGG	2 cut(s)	729, 1195
MvnI	CGCG	6 cut(s)	513, 519, 545, 633, 648, 1937
NaeI	GCCGGC	2 cut(s)	353, 610
NarI	GGCGCC	3 cut(s)	603, 690, 714
NciI	CCSGG	5 cut(s)	478, 870, 1467, 1680, 2405
NcoI	CCATGG	3 cut(s)	486, 777, 1846
NdeII	GATC	9 cut(s)	450, 669, 771, 838, 861, 1701, 2149, 2361, 2603
NgoMIV	GCCGGC	2 cut(s)	351, 608
NmeAIII	GCCGAG	2 cut(s)	742, 1012
NmuCI	GTSAC	9 cut(s)	529, 916, 1156, 1171, 1266, 1640, 1972, 2211, 2270
NspI	RCATGY	2 cut(s)	980, 2594
NspV	TTCGAA	1 cut(s)	708
OliI	CACNNNNGTG	2 cut(s)	1428, 1680
PagI	TCATGA	1 cut(s)	1557
PciSI	GCTCTTC	1 cut(s)	2466
PcsI	WCGNNNNNNNCGW	9 cut(s)	177, 180, 189, 441, 705, 714, 780, 1061, 1097
PdiI	GCCGGC	2 cut(s)	353, 610
PfeI	GAWTC	5 cut(s)	1517, 1662, 1874, 2562, 2647
PflFI	GACNNNGTC	1 cut(s)	1069
PleI	GAGTC	5 cut(s)	163, 937, 1168, 1814, 2219
PluTI	GGCGCC	3 cut(s)	606, 693, 717
PmaCI	CACGTG	2 cut(s)	429, 1949
PmlI	CACGTG	2 cut(s)	429, 1949
PpsI	GAGTC	5 cut(s)	163, 937, 1168, 1814, 2219
Ppu21I	YACGTR	3 cut(s)	429, 1949, 2275
PpuMI	RGGWCCY	2 cut(s)	721, 964
PshAI	GACNNNNGTC	1 cut(s)	2037
Psp124BI	GAGCTC	1 cut(s)	525
Psp5II	RGGWCCY	2 cut(s)	721, 964
Psp6I	CCWGG	2 cut(s)	727, 1193
PspCI	CACGTG	2 cut(s)	429, 1949
PspFI	CCCAGC	3 cut(s)	279, 296, 2544
PspGI	CCWGG	2 cut(s)	727, 1193
PspOMI	GGGCCC	1 cut(s)	2633
PspPPI	RGGWCCY	2 cut(s)	721, 964
PstI	CTGCAG	1 cut(s)	1208
PsuI	RGATCY	1 cut(s)	669
PsyI	GACNNNGTC	1 cut(s)	1069
PvuII	CAGCTG	1 cut(s)	279
RseI	CAYNNNNRTG	6 cut(s)	914, 981, 1376, 1428, 1680, 2420
SacI	GAGCTC	1 cut(s)	525
SapI	GCTCTTC	1 cut(s)	2466
SaqAI	TTAA	2 cut(s)	50, 2172
Sau3AI	GATC	9 cut(s)	450, 669, 771, 838, 861, 1701, 2149, 2361, 2603
ScaI	AGTACT	2 cut(s)	85, 2219
SchI	GAGTC	5 cut(s)	164, 938, 1168, 1814, 2219
ScrFI	CCNGG	7 cut(s)	478, 729, 870, 1195, 1467, 1680, 2405
SduI	GDGCHC	5 cut(s)	525, 1287, 2184, 2208, 2637
SfaNI	GCATC	5 cut(s)	198, 621, 918, 973, 1462
SfcI	CTRYAG	2 cut(s)	673, 1204
SfoI	GGCGCC	3 cut(s)	604, 691, 715
SfuI	TTCGAA	1 cut(s)	708
SmiMI	CAYNNNNRTG	6 cut(s)	914, 981, 1376, 1428, 1680, 2420
SmlI	CTYRAG	3 cut(s)	656, 1532, 1769
SmoI	CTYRAG	3 cut(s)	656, 1532, 1769
Sse9I	AATT	6 cut(s)	230, 1894, 1956, 2082, 2321, 2698
SspDI	GGCGCC	3 cut(s)	602, 689, 713
SspMI	CTAG	4 cut(s)	1659, 1824, 2042, 2249
SstI	GAGCTC	1 cut(s)	525
StyD4I	CCNGG	7 cut(s)	476, 727, 868, 1193, 1465, 1678, 2403
StyI	CCWWGG	7 cut(s)	420, 486, 777, 1572, 1846, 2035, 2490
TaqI	TCGA	6 cut(s)	39, 447, 708, 1091, 1985, 2126
TaqII	GACCGA	2 cut(s)	1045, 1529
TasI	AATT	6 cut(s)	230, 1894, 1956, 2082, 2321, 2698
TatI	WGTACW	5 cut(s)	83, 198, 1026, 2217, 2280
TauI	GCSGC	8 cut(s)	343, 346, 472, 558, 608, 636, 681, 690
TfiI	GAWTC	5 cut(s)	1517, 1662, 1874, 2562, 2647
Tru1I	TTAA	2 cut(s)	50, 2172
Tru9I	TTAA	2 cut(s)	50, 2172
TscAI	CASTG	4 cut(s)	393, 1275, 2058, 2560
TseFI	GTSAC	9 cut(s)	529, 916, 1156, 1171, 1266, 1640, 1972, 2211, 2270
TseI	GCWGC	2 cut(s)	5, 2662
Tsp45I	GTSAC	9 cut(s)	529, 916, 1156, 1171, 1266, 1640, 1972, 2211, 2270
TspDTI	ATGAA	9 cut(s)	361, 799, 1397, 1546, 1557, 1574, 2148, 2554, 2696
TspGWI	ACGGA	2 cut(s)	613, 2585
TspRI	CASTG	4 cut(s)	393, 1275, 2058, 2560
Tth111I	GACNNNGTC	1 cut(s)	1069
VneI	GTGCAC	1 cut(s)	2180
XapI	RAATTY	4 cut(s)	1894, 1956, 2321, 2698
XbaI	TCTAGA	1 cut(s)	2248
XceI	RCATGY	2 cut(s)	980, 2594
XmiI	GTMKAC	5 cut(s)	1578, 1619, 1647, 2166, 2578
XspI	CTAG	4 cut(s)	1659, 1824, 2042, 2249
ZraI	GACGTC	1 cut(s)	652
ZrmI	AGTACT	2 cut(s)	85, 2219

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.