Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0010866

Physical Location & Seq

Genomic Coordinates Reverse (-)

2496206 .. 2501402

Gene Structure 5197 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000000608

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2709 bp

ATGGCGGCCTCAGTCCAGCAGAACCGGCAGTTCCCTCACATCGACCCCGCCTTAAACGGCGTCGTCCGCTCCTCTTTCAAATCAAGCCACTTCCAAGACATCACTACTCCCCCGAAAAGCTCGGCCCCGATCGATGACTACGACGAGTCGTCCTCCAGTGACGACGAAAACGACGAGAGCATCGTAGAGTACATGGATTTGGTCCGGAGAGGCAACAGAGAATTAGAGCCGTCGATCTTGGACCCCAGAGATGAGGCCACGTCGGACAGCTGGGTGGAGCGCAACCCCAGCATGGTCCGCCTCACAGGGAAACACCCCTTCAACTCGGAGGCGCCGCTCAGCCGGCTCATGCACCACGGCTTCATCACTCCGGTCCCACTCCACTACGTCCGCAACCACGGCGTCGTCCCAAAGGCCACGTGGCACGACTGGACCGTCGAGGTCACCGGCCTTGTCAAGCGGCCCGCCCGGTTCACCATGGACCAGCTCACCACCGAGTTTCGAGCCCGCGAGCTCCCCGTCACCCTCGTCTGCGCGGGAAACCGCCGCAAGGAGCAGAATATGGTGAAGCAGACGATCGGATTCAACTGGGGCGCCGCCGGCGTCTCCACCTCAGTCTGGCGCGGCGTGCGCCTCCGCGACGTCCTCAAGCGGTGCGGGATCTACAGCCGCAAAGGCGGCGCCCTCAACGTGTGCTTCGAAGGCGCAGAGGACCTGCCAGGTGGCGGTGGCTCCAAGTACGCCACCAGTCTGAGAAAAGAGGTCGCCATGGACGAGAGCAGGGATATCATACTTGCTTACATGCAGAACGGCGAGCGTTTGGCCCCCGATCACGGGTTTCCGGTTCGGATGATCATACCCGGATTTATAGGCGGCCGGATGGTGAAATGGCTCAAACGCATCGTCGTGACGACGAAGGAGTCGGACTGTTATTATCATTACAAGGACAACAGGGTCCTTCCCTCGCATGTTGATGCCGAGCTGGCCAACGCTGAAGCATGGTGGTACAAGCCGGAGTACATAATCAACGAGCTGAACATAAACTCGGTCATTACGACGCCGTCTCACGAGGAGATATTGTCGATAAACTCGTGGACGAGGCCGTACACCCTCAAAGGCTACGCATATTCCGGAGGGGGTAAGAAAGTGACACGAGTGGAGGTGACTCTAGACGGTGGGGAGACCTGGCACGTATGCGATCTGGACCACCAAGAGAAGCCGAACAAATATGGGAAATACTGGTGCTGGTGCTTCTGGTCACTGGACCTGGAAGTGCTCAACTTACTGGTAGCCAAAGAGATTGCGGTGAGGGCTTGGGACGAAACCCACAACACTCAACCCGAAAAGCTCATCTGGAATGTCATGGGAATGATGAACAACTGTTGGTTCCGAGTGAAAATCAATGTGTTGCCACACAGAGGAGAGATTGGAATAGTGTTTGAGCATCCAACCAAACCCGGAAACCAATCCGGTGGGTGGATGGCAAAAGAGAGACGCTTGGAGACCGAATCCAACGCAACCCTCAAGAAGAGTGTCTCTTCACCCTTCATGAACACTTCATCCAAGGTCTACTCAATGTCCGAAGTCAAGAGGCATAACACCCCTCAGTCTACATGGATTGTTGTCCACGGTCACGTCTACGACTGCACTAGATTCCTCAATGACCACCCCGGTGGTGCTGATAGCATTTTGATCAATGCTGGCACAGATTGCACCGAAGAGTTTGAAGCAATCCATTCCGACAAGGCCAAGAAAATGCTCGAGGAATATAGAATAGGCGAGGTGGTCGGTACCACAGGTTACGCCTCGGACTCTAGCTCCCCTAATAATACCGTCCATGGGCCACCAAGAATATCAACTGTGGATTCTATGTCTTCTCTTACGAATTTTTTGGCTCCTATCAAAGAAATCACACTAAAAAGCGTCGCGCTCAATCCGCGCGAAAAAATTCCATGCAAAATTGTGACCAAGACCTCGATTTCACATGACGTGAGGATATTCAGATTTGCATTGCCTTCAGAAGACCAAGGTCTAGGGTTGCCAGTGGGCAAGCACATATTCTTGTGTGCTACAATTGAGGGCAAGCTTTGCATGAGGGCTTACACACCAACCAGCTCGATTGATGAAGTCGGGTATTTTGATCTGGTGGTCAAGGTGTACTTTAAGAATGTGCACCCTCGGTTCCCTAATGGTGGGCTCATGTCACAGTACTTGGACTCTCTCCCACTTGGGTCGTCTCTAGACGTGAAGGGTCCATTGGGTCACATAGAGTACAACGGTAAAGGTAACTTTTTGGTCCACGGTAAACCCAAGTTTGCAAAGAAACTCGCCATGATTGCCGGAGGGACGGGGATCACACCCATTTACCAAGTAGCACAAGCCATCCTGAAAGACCCGGAGGACCACACCGAAATGCACGTCGTATATGCAAACCGAACCGAAGAGGACATTTTGTTGAGGGAAGAGCTTGATGGTTGGGCTAAAGAGCATGAAAGGTTCAATGTGTGGTATGTGGTGGAGAATGGTAAGGAAGGCTGGGAATACAGTGTGGGATTCATCACGGAGAGTATACTGAGGGAGCATGTTCCCGATGGATCAGACGGTTCTCTAGCGTTGGCGTGCGGGCCCCCACCAATGATCCAATTTGCCGTGCAGCCCAATCTGGAGAAGATGAACTATGATGTCAAGAATTCGTTGCTGATATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0005886 GO:0006082 GO:0006807 GO:0006809 GO:0008150 GO:0008152 GO:0008940 GO:0009058 GO:0009314 GO:0009416 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009628 GO:0009703 GO:0009987 GO:0016020 GO:0016491 GO:0016661 GO:0017144 GO:0034641 GO:0042126 GO:0042128 GO:0042133 GO:0042136 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046209 GO:0046857 GO:0050896 GO:0051704 GO:0051707 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:0071941 GO:0071944 GO:0072593 GO:1903409 GO:2001057

KEGG Pathways

Metabolic & Signaling

ko00910 ko01120 map00910 map01120

Pfam Domains

Protein Families

Cyt-b5 FAD_binding_6 Mo-co_dimer NAD_binding_1 Oxidored_molyb

Protein Analysis

903

Amino Acids

101.46

Weight (kDa)

6.43

Isoelectric Point (pI)

42.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Oxidored_molyb	PF00174	133 - 312	1.1e-55	Oxidoreductase molybdopterin binding domain
Mo-co_dimer	PF03404	340 - 469	1.1e-57	Mo-co oxidoreductase dimerisation domain
Cyt-b5	PF00173	526 - 595	1.8e-27	Cytochrome b5-like Heme/Steroid binding domain
FAD_binding_6	PF00970	652 - 758	5e-37	Oxidoreductase FAD-binding domain
NAD_binding_1	PF00175	778 - 884	1.1e-34	Oxidoreductase NAD-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0010866)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G37130 AT1G77760
fragaria_vesca	FvH4_5g39010
malus_domestica	MD08G1172400.v1.1 MD15G1357900.v1.1
prunus_persica	Prupe.1G505400_v2.0.a1
pyrus_communis	pycom08g14700 pycom15g32000
rosa_chinensis	RchiOBHm_Chr7g0240971
rosa_laevigata	RLG00000000608
rosa_multiflora	Rmu_co8418311.1_g000001 Rmu_sc0041887.1_g000001 Rmu_ssc0000392.1_g000001
rosa_roxburghii	Rroxscaffold_3G00219350
rosa_rugosa	Rorug07G0341100
rosa_samantha	Rh7AG495900 Rh7BG467400 Rh7CG513400 Rh7DG480400
rosa_wichuraiana	Rw7G041900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	434, 919, 953
AatII	GACGTC	1 cut(s)	645
Acc36I	ACCTGC	1 cut(s)	723
Acc65I	GGTACC	1 cut(s)	1790
AccB1I	GGYRCC	4 cut(s)	331, 593, 680, 1790
AccBSI	CCGCTC	2 cut(s)	69, 337
AccI	GTMKAC	4 cut(s)	1569, 1610, 1638, 2569
AccII	CGCG	7 cut(s)	510, 536, 624, 639, 1928, 1939, 1941
AccIII	TCCGGA	2 cut(s)	204, 1130
AclWI	GGATC	4 cut(s)	668, 2360, 2602, 2632
AcoI	YGGCCR	2 cut(s)	874, 984
AcsI	RAATTY	3 cut(s)	1885, 1947, 2689
AcuI	CTGAAG	2 cut(s)	1014, 2001
AcvI	CACGTG	1 cut(s)	420
AcyI	GRCGYC	8 cut(s)	60, 332, 402, 594, 603, 642, 681, 1058
AfaI	GTAC	9 cut(s)	191, 740, 1007, 1019, 1106, 1792, 2159, 2210, 2273
AflIII	ACRYGT	1 cut(s)	690
AgsI	TTSAA	5 cut(s)	79, 322, 586, 1727, 2500
AhdI	GACNNNNNGTC	1 cut(s)	148
AjiI	CACGTC	5 cut(s)	261, 1636, 1990, 2245, 2419
AjnI	CCWGG	3 cut(s)	718, 1184, 1266
AjuI	GAANNNNNNNTTGG	2 cut(s)	2240, 2272
AleI	CACNNNNGTG	1 cut(s)	1671
AloI	GAACNNNNNNTCC	2 cut(s)	1544, 1576
Alw21I	GWGCWC	3 cut(s)	516, 1278, 2175
Alw26I	GTCTC	7 cut(s)	610, 1068, 1175, 1486, 1496, 1540, 2241
Alw44I	GTGCAC	1 cut(s)	2171
AlwI	GGATC	4 cut(s)	668, 2360, 2602, 2632
Ama87I	CYCGRG	1 cut(s)	1760
Aor13HI	TCCGGA	2 cut(s)	204, 1130
ApaI	GGGCCC	1 cut(s)	2628
ApaLI	GTGCAC	1 cut(s)	2171
ApeKI	GCWGC	1 cut(s)	2653
ApoI	RAATTY	3 cut(s)	1885, 1947, 2689
ArsI	GACNNNNNNTTYG	4 cut(s)	888, 920, 2403, 2435
Asp700I	GAANNNNTTC	1 cut(s)	1947
Asp718I	GGTACC	1 cut(s)	1790
AsuC2I	CCSGG	5 cut(s)	469, 861, 1458, 1671, 2396
AsuHPI	GGTGA	9 cut(s)	436, 466, 481, 514, 577, 895, 1174, 1318, 1533
AsuII	TTCGAA	1 cut(s)	699
AvaI	CYCGRG	1 cut(s)	1760
BaeGI	GKGCMC	2 cut(s)	2175, 2628
BalI	TGGCCA	1 cut(s)	986
BanI	GGYRCC	4 cut(s)	331, 593, 680, 1790
BanII	GRGCYC	4 cut(s)	508, 516, 2199, 2628
BauI	CACGAG	3 cut(s)	1067, 1090, 1152
BbrPI	CACGTG	1 cut(s)	420
BbsI	GAAGAC	2 cut(s)	1866, 2028
Bbv12I	GWGCWC	3 cut(s)	516, 1278, 2175
BbvI	GCAGC	1 cut(s)	2665
BccI	CCATC	5 cut(s)	874, 1474, 2390, 2465, 2585
BceAI	ACGGC	8 cut(s)	73, 214, 373, 415, 826, 1045, 1087, 2633
BciT130I	CCWGG	3 cut(s)	720, 1186, 1268
BclI	TGATCA	2 cut(s)	852, 1692
BcnI	CCSGG	5 cut(s)	469, 861, 1458, 1671, 2396
BcoDI	GTCTC	7 cut(s)	610, 1068, 1175, 1486, 1496, 1540, 2241
BfaI	CTAG	6 cut(s)	1169, 1650, 1815, 2033, 2240, 2609
BfmI	CTRYAG	1 cut(s)	664
BfoI	RGCGCY	3 cut(s)	335, 597, 684
BfuAI	ACCTGC	1 cut(s)	723
BglI	GCCNNNNNGGC	2 cut(s)	675, 983
BlpI	GCTNAGC	1 cut(s)	338
BmcAI	AGTACT	1 cut(s)	2210
Bme1390I	CCNGG	8 cut(s)	469, 720, 861, 1186, 1268, 1458, 1671, 2396
BmeRI	GACNNNNNGTC	1 cut(s)	148
BmeT110I	CYCGRG	1 cut(s)	1760
BmgBI	CACGTC	5 cut(s)	261, 1636, 1990, 2245, 2419
BmrFI	CCNGG	8 cut(s)	469, 720, 861, 1186, 1268, 1458, 1671, 2396
BmrI	ACTGGG	1 cut(s)	598
BmsI	GCATC	4 cut(s)	189, 909, 964, 1453
BmuI	ACTGGG	1 cut(s)	598
BoxI	GACNNNNGTC	1 cut(s)	2028
BpiI	GAAGAC	2 cut(s)	1866, 2028
BplI	GAGNNNNNCTC	2 cut(s)	137, 169
BpmI	CTGGAG	2 cut(s)	139, 2684
Bpu1102I	GCTNAGC	1 cut(s)	338
Bpu14I	TTCGAA	1 cut(s)	699
BpuEI	CTTGAG	2 cut(s)	632, 1508
BpuMI	CCSGG	5 cut(s)	469, 861, 1458, 1671, 2396
Bsa29I	ATCGAT	1 cut(s)	132
BsaAI	YACGTR	2 cut(s)	420, 1192
BsaHI	GRCGYC	8 cut(s)	60, 332, 402, 594, 603, 642, 681, 1058
BsaI	GGTCTC	2 cut(s)	1175, 1496
BsaWI	WCCGGW	5 cut(s)	204, 370, 841, 1130, 1469
BsaXI	ACNNNNNCTCC	4 cut(s)	1064, 1094, 1802, 1832
Bse118I	RCCGGY	4 cut(s)	24, 342, 446, 599
Bse1I	ACTGG	8 cut(s)	156, 434, 593, 747, 1244, 1266, 1290, 2042
Bse3DI	GCAATG	1 cut(s)	2009
BseAI	TCCGGA	2 cut(s)	204, 1130
BseBI	CCWGG	3 cut(s)	720, 1186, 1268
BseCI	ATCGAT	1 cut(s)	132
BseGI	GGATG	6 cut(s)	855, 885, 1444, 1485, 1559, 2382
BseMI	GCAATG	1 cut(s)	2009
BseMII	CTCAG	6 cut(s)	24, 352, 627, 743, 1619, 2564
BseNI	ACTGG	8 cut(s)	156, 434, 593, 747, 1244, 1266, 1290, 2042
BseRI	GAGGAG	3 cut(s)	61, 1085, 1434
BseSI	GKGCMC	2 cut(s)	2175, 2628
BseX3I	CGGCCG	1 cut(s)	874
BseXI	GCAGC	1 cut(s)	2665
BseYI	CCCAGC	3 cut(s)	270, 287, 2535
BsgI	GTGCAG	2 cut(s)	1630, 2672
Bsh1236I	CGCG	7 cut(s)	510, 536, 624, 639, 1928, 1939, 1941
Bsh1285I	CGRYCG	3 cut(s)	132, 579, 877
BshNI	GGYRCC	4 cut(s)	331, 593, 680, 1790
BshVI	ATCGAT	1 cut(s)	132
BsiEI	CGRYCG	3 cut(s)	132, 579, 877
BsiHKAI	GWGCWC	3 cut(s)	516, 1278, 2175
BsiHKCI	CYCGRG	1 cut(s)	1760
BslFI	GGGAC	4 cut(s)	359, 392, 1331, 2359
BsmAI	GTCTC	7 cut(s)	610, 1068, 1175, 1486, 1496, 1540, 2241
BsmBI	CGTCTC	4 cut(s)	610, 1068, 1486, 2241
BsmFI	GGGAC	4 cut(s)	359, 392, 1331, 2359
Bso31I	GGTCTC	2 cut(s)	1175, 1496
BsoBI	CYCGRG	1 cut(s)	1760
Bsp119I	TTCGAA	1 cut(s)	699
Bsp120I	GGGCCC	1 cut(s)	2624
Bsp1286I	GDGCHC	6 cut(s)	508, 516, 1278, 2175, 2199, 2628
Bsp13I	TCCGGA	2 cut(s)	204, 1130
Bsp1720I	GCTNAGC	1 cut(s)	338
Bsp19I	CCATGG	3 cut(s)	477, 768, 1837
BspCNI	CTCAG	6 cut(s)	23, 351, 626, 744, 1618, 2565
BspDI	ATCGAT	1 cut(s)	132
BspEI	TCCGGA	2 cut(s)	204, 1130
BspFNI	CGCG	7 cut(s)	510, 536, 624, 639, 1928, 1939, 1941
BspHI	TCATGA	1 cut(s)	1548
BspMI	ACCTGC	1 cut(s)	723
BspPI	GGATC	4 cut(s)	668, 2360, 2602, 2632
BspQI	GCTCTTC	1 cut(s)	2457
BspT104I	TTCGAA	1 cut(s)	699
BspT107I	GGYRCC	4 cut(s)	331, 593, 680, 1790
BspTNI	GGTCTC	2 cut(s)	1175, 1496
BsrBI	CCGCTC	2 cut(s)	69, 337
BsrDI	GCAATG	1 cut(s)	2009
BsrFI	RCCGGY	4 cut(s)	24, 342, 446, 599
BsrI	ACTGG	8 cut(s)	156, 434, 593, 747, 1244, 1266, 1290, 2042
BssAI	RCCGGY	4 cut(s)	24, 342, 446, 599
BssNAI	GTATAC	1 cut(s)	2570
BssNI	GRCGYC	8 cut(s)	60, 332, 402, 594, 603, 642, 681, 1058
BssSI	CACGAG	3 cut(s)	1067, 1090, 1152
BssT1I	CCWWGG	5 cut(s)	477, 768, 1563, 1837, 2026
Bst1107I	GTATAC	1 cut(s)	2570
Bst2BI	CACGAG	3 cut(s)	1067, 1090, 1152
Bst2UI	CCWGG	3 cut(s)	720, 1186, 1268
Bst6I	CTCTTC	5 cut(s)	1523, 1543, 1713, 2436, 2457
BstACI	GRCGYC	8 cut(s)	60, 332, 402, 594, 603, 642, 681, 1058
BstAPI	GCANNNNNTGC	2 cut(s)	1710, 2088
BstBAI	YACGTR	2 cut(s)	420, 1192
BstBI	TTCGAA	1 cut(s)	699
BstDEI	CTNAG	6 cut(s)	10, 338, 613, 752, 1605, 2573
BstDSI	CCRYGG	7 cut(s)	355, 397, 477, 768, 1627, 1837, 2299
BstEII	GGTNACC	1 cut(s)	442
BstF5I	GGATG	6 cut(s)	855, 885, 1444, 1485, 1559, 2382
BstFNI	CGCG	7 cut(s)	510, 536, 624, 639, 1928, 1939, 1941
BstH2I	RGCGCY	3 cut(s)	335, 597, 684
BstMAI	GTCTC	7 cut(s)	610, 1068, 1175, 1486, 1496, 1540, 2241
BstMCI	CGRYCG	3 cut(s)	132, 579, 877
BstNI	CCWGG	3 cut(s)	720, 1186, 1268
BstNSI	RCATGY	3 cut(s)	805, 971, 2585
BstPAI	GACNNNNGTC	1 cut(s)	2028
BstPI	GGTNACC	1 cut(s)	442
BstSCI	CCNGG	8 cut(s)	467, 718, 859, 1184, 1266, 1456, 1669, 2394
BstSFI	CTRYAG	1 cut(s)	664
BstSLI	GKGCMC	2 cut(s)	2175, 2628
BstUI	CGCG	7 cut(s)	510, 536, 624, 639, 1928, 1939, 1941
BstV1I	GCAGC	1 cut(s)	2665
BstV2I	GAAGAC	2 cut(s)	1866, 2028
BstX2I	RGATCY	1 cut(s)	660
BstXI	CCANNNNNNTGG	2 cut(s)	1472, 1673
BstYI	RGATCY	1 cut(s)	660
BstZ17I	GTATAC	1 cut(s)	2570
BstZI	CGGCCG	1 cut(s)	874
Bsu15I	ATCGAT	1 cut(s)	132
BsuTUI	ATCGAT	1 cut(s)	132
BtgI	CCRYGG	7 cut(s)	355, 397, 477, 768, 1627, 1837, 2299
BtrI	CACGTC	5 cut(s)	261, 1636, 1990, 2245, 2419
BtsCI	GGATG	6 cut(s)	855, 885, 1444, 1485, 1559, 2382
BtsIMutI	CAGTG	4 cut(s)	163, 1259, 2049, 2551
BveI	ACCTGC	1 cut(s)	723
CciI	TCATGA	1 cut(s)	1548
Cfr10I	RCCGGY	4 cut(s)	24, 342, 446, 599
ClaI	ATCGAT	1 cut(s)	132
CseI	GACGC	6 cut(s)	49, 391, 592, 1066, 1503, 1912
Csp6I	GTAC	9 cut(s)	190, 739, 1006, 1018, 1105, 1791, 2158, 2209, 2272
CviQI	GTAC	9 cut(s)	190, 739, 1006, 1018, 1105, 1791, 2158, 2209, 2272
DdeI	CTNAG	6 cut(s)	10, 338, 613, 752, 1605, 2573
DinI	GGCGCC	3 cut(s)	333, 595, 682
DrdI	GACNNNNNNGTC	3 cut(s)	434, 919, 953
DriI	GACNNNNNGTC	1 cut(s)	148
DseDI	GACNNNNNNGTC	3 cut(s)	434, 919, 953
EaeI	YGGCCR	2 cut(s)	874, 984
EagI	CGGCCG	1 cut(s)	874
Eam1104I	CTCTTC	5 cut(s)	1523, 1543, 1713, 2436, 2457
Eam1105I	GACNNNNNGTC	1 cut(s)	148
EarI	CTCTTC	5 cut(s)	1523, 1543, 1713, 2436, 2457
EciI	GGCGGA	1 cut(s)	287
Ecl136II	GAGCTC	1 cut(s)	514
EclXI	CGGCCG	1 cut(s)	874
Eco130I	CCWWGG	5 cut(s)	477, 768, 1563, 1837, 2026
Eco24I	GRGCYC	4 cut(s)	508, 516, 2199, 2628
Eco31I	GGTCTC	2 cut(s)	1175, 1496
Eco32I	GATATC	1 cut(s)	787
Eco52I	CGGCCG	1 cut(s)	874
Eco53kI	GAGCTC	1 cut(s)	514
Eco57I	CTGAAG	2 cut(s)	1014, 2001
Eco72I	CACGTG	1 cut(s)	420
Eco88I	CYCGRG	1 cut(s)	1760
Eco91I	GGTNACC	1 cut(s)	442
EcoICRI	GAGCTC	1 cut(s)	514
EcoO109I	RGGNCCY	3 cut(s)	712, 955, 2625
EcoO65I	GGTNACC	1 cut(s)	442
EcoRI	GAATTC	1 cut(s)	2689
EcoRII	CCWGG	3 cut(s)	718, 1184, 1266
EcoRV	GATATC	1 cut(s)	787
EcoT14I	CCWWGG	5 cut(s)	477, 768, 1563, 1837, 2026
EcoT38I	GRGCYC	4 cut(s)	508, 516, 2199, 2628
EgeI	GGCGCC	3 cut(s)	333, 595, 682
EheI	GGCGCC	3 cut(s)	333, 595, 682
ErhI	CCWWGG	5 cut(s)	477, 768, 1563, 1837, 2026
Esp3I	CGTCTC	4 cut(s)	610, 1068, 1486, 2241
FalI	AAGNNNNNCTT	2 cut(s)	2144, 2176
FaqI	GGGAC	4 cut(s)	359, 392, 1331, 2359
FauI	CCCGC	6 cut(s)	55, 472, 515, 529, 650, 2615
FbaI	TGATCA	2 cut(s)	852, 1692
FblI	GTMKAC	4 cut(s)	1569, 1610, 1638, 2569
FokI	GGATG	6 cut(s)	862, 892, 1431, 1492, 1546, 2369
FriOI	GRGCYC	4 cut(s)	508, 516, 2199, 2628
FspBI	CTAG	6 cut(s)	1169, 1650, 1815, 2033, 2240, 2609
GsaI	CCCAGC	3 cut(s)	274, 291, 2539
GsuI	CTGGAG	2 cut(s)	139, 2684
HaeII	RGCGCY	3 cut(s)	335, 597, 684
HgaI	GACGC	6 cut(s)	49, 391, 592, 1066, 1503, 1912
Hin1I	GRCGYC	8 cut(s)	60, 332, 402, 594, 603, 642, 681, 1058
HindIII	AAGCTT	1 cut(s)	2084
HphI	GGTGA	9 cut(s)	436, 466, 481, 514, 577, 895, 1174, 1318, 1533
HpyAV	CCTTC	8 cut(s)	328, 695, 910, 968, 1555, 2025, 2242, 2525
HpyF3I	CTNAG	6 cut(s)	10, 338, 613, 752, 1605, 2573
Hsp92I	GRCGYC	8 cut(s)	60, 332, 402, 594, 603, 642, 681, 1058
KasI	GGCGCC	3 cut(s)	331, 593, 680
Kpn2I	TCCGGA	2 cut(s)	204, 1130
KpnI	GGTACC	1 cut(s)	1794
KroI	GCCGGC	2 cut(s)	342, 599
KroNI	GCCGGC	2 cut(s)	344, 601
Ksp22I	TGATCA	2 cut(s)	852, 1692
LguI	GCTCTTC	1 cut(s)	2457
LmnI	GCTCC	8 cut(s)	74, 277, 519, 553, 737, 1823, 1900, 2578
Lsp1109I	GCAGC	1 cut(s)	2665
LweI	GCATC	4 cut(s)	189, 909, 964, 1453
MaeI	CTAG	6 cut(s)	1169, 1650, 1815, 2033, 2240, 2609
MbiI	CCGCTC	2 cut(s)	69, 337
MboII	GAAGA	8 cut(s)	1530, 1540, 1730, 1866, 2033, 2453, 2474, 2680
MfeI	CAATTG	1 cut(s)	2073
MflI	RGATCY	1 cut(s)	660
MhlI	GDGCHC	6 cut(s)	508, 516, 1278, 2175, 2199, 2628
MlsI	TGGCCA	1 cut(s)	986
MluCI	AATT	7 cut(s)	221, 1885, 1947, 1959, 2073, 2642, 2689
MluNI	TGGCCA	1 cut(s)	986
Mly113I	GGCGCC	3 cut(s)	332, 594, 681
MlyI	GAGTC	5 cut(s)	155, 929, 1159, 1805, 2210
MmeI	TCCRAC	5 cut(s)	243, 903, 1472, 1536, 1764
Mox20I	TGGCCA	1 cut(s)	986
MreI	CGCCGGCG	1 cut(s)	599
MroI	TCCGGA	2 cut(s)	204, 1130
MroNI	GCCGGC	2 cut(s)	342, 599
MroXI	GAANNNNTTC	1 cut(s)	1947
MscI	TGGCCA	1 cut(s)	986
MseI	TTAA	2 cut(s)	53, 2163
MslI	CAYNNNNRTG	5 cut(s)	905, 972, 1367, 1671, 2411
Msp20I	TGGCCA	1 cut(s)	986
MspA1I	CMGCKG	1 cut(s)	270
MspR9I	CCNGG	8 cut(s)	469, 720, 861, 1186, 1268, 1458, 1671, 2396
MunI	CAATTG	1 cut(s)	2073
MvaI	CCWGG	3 cut(s)	720, 1186, 1268
MvnI	CGCG	7 cut(s)	510, 536, 624, 639, 1928, 1939, 1941
NaeI	GCCGGC	2 cut(s)	344, 601
NarI	GGCGCC	3 cut(s)	332, 594, 681
NciI	CCSGG	5 cut(s)	469, 861, 1458, 1671, 2396
NcoI	CCATGG	3 cut(s)	477, 768, 1837
NgoMIV	GCCGGC	2 cut(s)	342, 599
NmeAIII	GCCGAG	2 cut(s)	101, 1003
NspI	RCATGY	3 cut(s)	805, 971, 2585
NspV	TTCGAA	1 cut(s)	699
OliI	CACNNNNGTG	1 cut(s)	1671
PaeR7I	CTCGAG	1 cut(s)	1760
PagI	TCATGA	1 cut(s)	1548
PciSI	GCTCTTC	1 cut(s)	2457
PcsI	WCGNNNNNNNCGW	9 cut(s)	138, 168, 171, 180, 432, 696, 771, 1052, 1088
PdiI	GCCGGC	2 cut(s)	344, 601
PdmI	GAANNNNTTC	1 cut(s)	1947
PfeI	GAWTC	5 cut(s)	582, 1508, 1653, 1865, 2553
PflFI	GACNNNGTC	1 cut(s)	1060
Ple19I	CGATCG	2 cut(s)	132, 579
PleI	GAGTC	5 cut(s)	154, 928, 1159, 1805, 2210
PluTI	GGCGCC	3 cut(s)	335, 597, 684
PmaCI	CACGTG	1 cut(s)	420
PmlI	CACGTG	1 cut(s)	420
PpsI	GAGTC	5 cut(s)	154, 928, 1159, 1805, 2210
Ppu21I	YACGTR	2 cut(s)	420, 1192
PpuMI	RGGWCCY	2 cut(s)	712, 955
PshAI	GACNNNNGTC	1 cut(s)	2028
Psp124BI	GAGCTC	1 cut(s)	516
Psp5II	RGGWCCY	2 cut(s)	712, 955
Psp6I	CCWGG	3 cut(s)	718, 1184, 1266
PspCI	CACGTG	1 cut(s)	420
PspEI	GGTNACC	1 cut(s)	442
PspFI	CCCAGC	3 cut(s)	270, 287, 2535
PspGI	CCWGG	3 cut(s)	718, 1184, 1266
PspOMI	GGGCCC	1 cut(s)	2624
PspPPI	RGGWCCY	2 cut(s)	712, 955
PspXI	VCTCGAGB	1 cut(s)	1760
PsuI	RGATCY	1 cut(s)	660
PsyI	GACNNNGTC	1 cut(s)	1060
PvuI	CGATCG	2 cut(s)	132, 579
PvuII	CAGCTG	1 cut(s)	270
RsaI	GTAC	9 cut(s)	191, 740, 1007, 1019, 1106, 1792, 2159, 2210, 2273
RsaNI	GTAC	9 cut(s)	190, 739, 1006, 1018, 1105, 1791, 2158, 2209, 2272
RseI	CAYNNNNRTG	5 cut(s)	905, 972, 1367, 1671, 2411
SacI	GAGCTC	1 cut(s)	516
SapI	GCTCTTC	1 cut(s)	2457
SaqAI	TTAA	2 cut(s)	53, 2163
ScaI	AGTACT	1 cut(s)	2210
SchI	GAGTC	5 cut(s)	155, 929, 1159, 1805, 2210
ScrFI	CCNGG	8 cut(s)	469, 720, 861, 1186, 1268, 1458, 1671, 2396
SduI	GDGCHC	6 cut(s)	508, 516, 1278, 2175, 2199, 2628
SfaNI	GCATC	4 cut(s)	189, 909, 964, 1453
SfcI	CTRYAG	1 cut(s)	664
SfoI	GGCGCC	3 cut(s)	333, 595, 682
Sfr274I	CTCGAG	1 cut(s)	1760
SfuI	TTCGAA	1 cut(s)	699
SgrAI	CRCCGGYG	1 cut(s)	599
SlaI	CTCGAG	1 cut(s)	1760
SmiMI	CAYNNNNRTG	5 cut(s)	905, 972, 1367, 1671, 2411
SmlI	CTYRAG	3 cut(s)	647, 1523, 1760
SmoI	CTYRAG	3 cut(s)	647, 1523, 1760
Sse9I	AATT	7 cut(s)	221, 1885, 1947, 1959, 2073, 2642, 2689
SspDI	GGCGCC	3 cut(s)	331, 593, 680
SspMI	CTAG	6 cut(s)	1169, 1650, 1815, 2033, 2240, 2609
SstI	GAGCTC	1 cut(s)	516
StyD4I	CCNGG	8 cut(s)	467, 718, 859, 1184, 1266, 1456, 1669, 2394
StyI	CCWWGG	5 cut(s)	477, 768, 1563, 1837, 2026
TaqII	GACCGA	2 cut(s)	1036, 1520
TasI	AATT	7 cut(s)	221, 1885, 1947, 1959, 2073, 2642, 2689
TatI	WGTACW	5 cut(s)	189, 1017, 2157, 2208, 2271
TauI	GCSGC	9 cut(s)	8, 337, 463, 549, 599, 627, 672, 681, 876
TfiI	GAWTC	5 cut(s)	582, 1508, 1653, 1865, 2553
Tru1I	TTAA	2 cut(s)	53, 2163
Tru9I	TTAA	2 cut(s)	53, 2163
TscAI	CASTG	4 cut(s)	163, 1266, 2049, 2551
TseI	GCWGC	1 cut(s)	2653
TspDTI	ATGAA	9 cut(s)	352, 1388, 1537, 1548, 1565, 2139, 2505, 2545, 2687
TspGWI	ACGGA	1 cut(s)	2576
TspRI	CASTG	4 cut(s)	163, 1266, 2049, 2551
Tth111I	GACNNNGTC	1 cut(s)	1060
VneI	GTGCAC	1 cut(s)	2171
XapI	RAATTY	3 cut(s)	1885, 1947, 2689
XbaI	TCTAGA	2 cut(s)	1168, 2239
XceI	RCATGY	3 cut(s)	805, 971, 2585
XcmI	CCANNNNNNNNNTGG	1 cut(s)	417
XhoI	CTCGAG	1 cut(s)	1760
XmiI	GTMKAC	4 cut(s)	1569, 1610, 1638, 2569
XmnI	GAANNNNTTC	1 cut(s)	1947
XspI	CTAG	6 cut(s)	1169, 1650, 1815, 2033, 2240, 2609
ZraI	GACGTC	1 cut(s)	643
ZrmI	AGTACT	1 cut(s)	2210

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.