Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0010866

Physical Location & Seq

Genomic Coordinates Forward (+)

69619995 .. 69624613

Gene Structure 4619 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG495900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2724 bp

ATGGCGGCCTCAGTCCAGCAGAACCGCCAGTTCCCTCACATCGACCCCGCCGCCCTAAACGGCGTCGTCCGCTCCTCTTTCAAATCAAGTACTCCCAACCGCCACTTCCAAGACATCACTACATCCCCGAAAAGCTCGGCCCCGATCGGTGAATACGACGAGTCGTCGTCCAGCGACGACGAAAACGACGAGAGCATCGTAGAGTACATGGATTTGGTCCGGAGAGGCAACAGAGAATTAGAGCCGTCGATCTTGGACCCCAGAGATGAGGCCACGTCGGACAGCTGGGTGGAGCGCAACCCCAGCATGGTCCGCCTCACAGGGAAACACCCCTTCAACTCGGAGCCGCCGCTCAGCCGGCTCATGCACCACGGCTTCATCACTCCGGTCCCACTCCACTACGTCCGCAACCACGGCGTCGTCCCGAAGGCCACGTGGCACGACTGGACCGTCGAGGTCACCGGCCTCGTCAAGCGGCCCGCCCGGTTCACCATGGACCAGCTCACCACCGAGTTTCGCGCCCGCGAGCTCCCCGTCACCCTCGTCTGCGCGGGAAACCGCCGCAAGGAGCAGAACATGGTGAAGCAGACGATCGGATTCAACTGGGGCGCCGCCGGCGTCTCCACCTCCGTCTGGCGCGGCGTGCGCCTCCGCGACGTCCTCAAGCGGTGCGGGATCTACAGCCGCAAAGGCGGCGCCCTCAACGTGTGCTTCGAAGGCGCCGAGGACCTGCCAGGTGGCGGTGGGTCCAAGTACGCCACCAGTCTGAGAAAAGAGGTCGCGATGGACGAGAGCAGGGATATCATACTTGCTTACATGCAAAACGGCGAGCGTTTGGCCCCCGATCACGGGTTTCCGGTTCGGGTGATCATACCCGGATTTATAGGGGGCCGGATGGTGAAATGGCTCAAACGCATCGTCGTGACGACGAAGGAGTCGGACTGTTACTATCATTACAAGGACAACAGGGTCCTTCCCTCGCATGTTGATGCCGAGCTGGCCAACGCTGAAGCGTGGTGGTACAAGCCGGAGTACATAATCAACGAGCTGAACATAAACTCGGTCATTACGACGCCGTCTCACGAGGAGATATTGTCGATAAACTCGTGGACGAGGCCGTACACCCTCAAAGGCTACGCATATTCCGGAGGGGGTAAGAAAGTGACACGAGTGGAGGTGACTCTAGACGGTGGGGAGACCTGGCACGTCTGCGATCTGGACCACCAAGAGAAGCCGAACAAATATGGGAAATACTGGTGCTGGTGCTTCTGGTCACTGGACGTGGAAGTGCTCAACTTACTGGTAGCCAAAGAGATTGCGGTGAGGGCTTGGGACGAAACCCACAACACTCAGCCCGAAAAGCTCATCTGGAATGTCATGGGAATGATGAACAACTGTTGGTTCCGAGTGAAAATCAATGTGTTGCCACACAGAGGAGAGATTGGAATAGTGTTTGAGCATCCAACCAAACCCGGAAACCAATCCGGCGGGTGGATGGCAAAAGAGAGACGCTTGGAGACCGAATCCAACGCAACCCTCAAGAAGAGTGTCTCTTCACCCTTCATGAACACTTCATCCAAGGTCTACTCAATGTCCGAAGTTAAGAGGCATAACACCCCTCAGTCTACATGGATTGTTGTCCACGGTCACGTCTACGACTGCACTAGATTCCTCAATGACCACCCGGGCGGTGCTGATAGCATTTTGATCAATGCTGGAACAGATTGCACCGAAGAGTTTGAAGCAATCCATTCCGACAAGGCCAAGAAAATGCTTGAGGAATATAGAATAGGCGAGGTGGTCGGTACCACAGGTTACGCCTCGGACTCTAGCTCCCCTAATAATACCGTCCATGGGCCACCAAGAATATCAACGGTGGATTCTATGTCTTCTCTTACGAATTTTTTGGCTCCTATCAAAGAAATCACACTAAAAAGCGTTGCGCTCAACCCGCGCGAGAAAATTCCATGCAAGCTTGTCACCAAGACCTCGATTTCACATGACGTGAGGATATTCAGATTTGCATTGCCTTCAGAAGACCAAGGTCTAGGGTTGCCAGTGGGCAAGCACATATTCTTGTGTGCTACAATTGAGGGCAAGCTTTGCATGAGGGCTTACACACCAACCAGCTCGATTGATGAAGTTGGGTATTTTGATCTGGTGGTCAAGGTGTACTTTAAGAATGTGCACCCTCGGTTCCCTAATGGTGGGCTCATGTCACAGTACTTGGACTCTCTCCCAATTGGGTCGTCTCTAGACGTGAAGGGTCCATTGGGTCACATAGAGTACAACGGTAAAGGTAACTTTTTGGTCCACGGTAAACCCAAGTTTGCAAAGAAACTCGCCATGATTGCCGGAGGGACGGGGATCACACCCATTTACCAAGTAGCACAAGCCATCCTGAAAGACCCGGAGGACCACACCGAAATGCATGTCGTATATGCAAACCGAACCGAAGAGGACATATTGCTGAGGGAAGAACTTGATGGTTGGGCTAAAGAGCATGAAAGGTTCAATGTGTGGTATGTGGTGGAGAATGGTAAGGAAGGCTGGGAATACAGTGTGGGATTCATCACGGAGAGCATACTGAGGGAGCATGTTCCCGATGGATCAGACGGTTCTCTTGCGTTGGCGTGCGGGCCCCCACCAATGATCCAGTTTGCCGTGCAGCCAAATCTGGAGAAGATGAACTATGATGTCAAGAATTCGTTGCTGATATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0005886 GO:0006082 GO:0006807 GO:0006809 GO:0008150 GO:0008152 GO:0008940 GO:0009058 GO:0009314 GO:0009416 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009628 GO:0009703 GO:0009987 GO:0016020 GO:0016491 GO:0016661 GO:0017144 GO:0034641 GO:0042126 GO:0042128 GO:0042133 GO:0042136 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046209 GO:0046857 GO:0050896 GO:0051704 GO:0051707 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:0071941 GO:0071944 GO:0072593 GO:1903409 GO:2001057

KEGG Pathways

Metabolic & Signaling

ko00910 ko01120 map00910 map01120

Pfam Domains

Protein Families

Cyt-b5 FAD_binding_6 Mo-co_dimer NAD_binding_1 Oxidored_molyb

Protein Analysis

907

Amino Acids

101.93

Weight (kDa)

6.56

Isoelectric Point (pI)

43.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Oxidored_molyb	PF00174	138 - 317	1.2e-55	Oxidoreductase molybdopterin binding domain
Mo-co_dimer	PF03404	345 - 474	4.3e-58	Mo-co oxidoreductase dimerisation domain
Cyt-b5	PF00173	531 - 600	1.8e-27	Cytochrome b5-like Heme/Steroid binding domain
FAD_binding_6	PF00970	657 - 763	1.4e-37	Oxidoreductase FAD-binding domain
NAD_binding_1	PF00175	783 - 889	1.1e-34	Oxidoreductase NAD-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0010866)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G37130 AT1G77760
fragaria_vesca	FvH4_5g39010
malus_domestica	MD08G1172400.v1.1 MD15G1357900.v1.1
prunus_persica	Prupe.1G505400_v2.0.a1
pyrus_communis	pycom08g14700 pycom15g32000
rosa_chinensis	RchiOBHm_Chr7g0240971
rosa_laevigata	RLG00000000608
rosa_multiflora	Rmu_co8418311.1_g000001 Rmu_sc0041887.1_g000001 Rmu_ssc0000392.1_g000001
rosa_roxburghii	Rroxscaffold_3G00219350
rosa_rugosa	Rorug07G0341100
rosa_samantha	Rh7AG495900 Rh7BG467400 Rh7CG513400 Rh7DG480400
rosa_wichuraiana	Rw7G041900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	449, 934, 968
AatII	GACGTC	1 cut(s)	660
Acc36I	ACCTGC	1 cut(s)	738
Acc65I	GGTACC	1 cut(s)	1805
AccB1I	GGYRCC	4 cut(s)	608, 695, 719, 1805
AccBSI	CCGCTC	2 cut(s)	72, 352
AccI	GTMKAC	3 cut(s)	1584, 1625, 1653
AccII	CGCG	8 cut(s)	519, 525, 551, 639, 654, 782, 1954, 1956
AccIII	TCCGGA	2 cut(s)	219, 1145
AclWI	GGATC	4 cut(s)	683, 2375, 2617, 2647
AcoI	YGGCCR	1 cut(s)	999
AcsI	RAATTY	3 cut(s)	1900, 1962, 2704
AcuI	CTGAAG	2 cut(s)	1029, 2016
AcvI	CACGTG	1 cut(s)	435
AcyI	GRCGYC	8 cut(s)	63, 417, 609, 618, 657, 696, 720, 1073
AflIII	ACRYGT	1 cut(s)	705
AgsI	TTSAA	5 cut(s)	82, 337, 601, 1742, 2515
AhdI	GACNNNNNGTC	1 cut(s)	163
AjiI	CACGTC	6 cut(s)	276, 1207, 1282, 1651, 2005, 2260
AjnI	CCWGG	2 cut(s)	733, 1199
AjuI	GAANNNNNNNTTGG	4 cut(s)	89, 121, 2255, 2287
AloI	GAACNNNNNNTCC	2 cut(s)	1559, 1591
Alw21I	GWGCWC	3 cut(s)	531, 1293, 2190
Alw26I	GTCTC	7 cut(s)	625, 1083, 1190, 1501, 1511, 1555, 2256
Alw44I	GTGCAC	1 cut(s)	2186
AlwI	GGATC	4 cut(s)	683, 2375, 2617, 2647
Ama87I	CYCGRG	1 cut(s)	1684
Aor13HI	TCCGGA	2 cut(s)	219, 1145
ApaI	GGGCCC	1 cut(s)	2643
ApaLI	GTGCAC	1 cut(s)	2186
ApeKI	GCWGC	1 cut(s)	2668
ApoI	RAATTY	3 cut(s)	1900, 1962, 2704
ArsI	GACNNNNNNTTYG	4 cut(s)	903, 935, 2418, 2450
Asp718I	GGTACC	1 cut(s)	1805
AsuC2I	CCSGG	6 cut(s)	484, 876, 1473, 1685, 1686, 2411
AsuII	TTCGAA	1 cut(s)	714
AvaI	CYCGRG	1 cut(s)	1684
BaeGI	GKGCMC	2 cut(s)	2190, 2643
BalI	TGGCCA	1 cut(s)	1001
BanI	GGYRCC	4 cut(s)	608, 695, 719, 1805
BanII	GRGCYC	3 cut(s)	531, 2214, 2643
BauI	CACGAG	3 cut(s)	1082, 1105, 1167
BbrPI	CACGTG	1 cut(s)	435
BbsI	GAAGAC	2 cut(s)	1881, 2043
Bbv12I	GWGCWC	3 cut(s)	531, 1293, 2190
BbvCI	CCTCAGC	1 cut(s)	2471
BbvI	GCAGC	1 cut(s)	2680
BccI	CCATC	6 cut(s)	778, 889, 1489, 2405, 2480, 2600
BceAI	ACGGC	8 cut(s)	76, 229, 388, 430, 841, 1060, 1102, 2648
BciT130I	CCWGG	2 cut(s)	735, 1201
BclI	TGATCA	2 cut(s)	867, 1707
BcnI	CCSGG	6 cut(s)	484, 876, 1473, 1685, 1686, 2411
BcoDI	GTCTC	7 cut(s)	625, 1083, 1190, 1501, 1511, 1555, 2256
BfaI	CTAG	5 cut(s)	1184, 1665, 1830, 2048, 2255
BfmI	CTRYAG	1 cut(s)	679
BfoI	RGCGCY	3 cut(s)	612, 699, 723
BfuAI	ACCTGC	1 cut(s)	738
BglI	GCCNNNNNGGC	2 cut(s)	690, 998
BlpI	GCTNAGC	1 cut(s)	353
BmcAI	AGTACT	2 cut(s)	91, 2225
Bme1390I	CCNGG	8 cut(s)	484, 735, 876, 1201, 1473, 1685, 1686, 2411
BmeRI	GACNNNNNGTC	1 cut(s)	163
BmeT110I	CYCGRG	1 cut(s)	1684
BmgBI	CACGTC	6 cut(s)	276, 1207, 1282, 1651, 2005, 2260
BmrFI	CCNGG	8 cut(s)	484, 735, 876, 1201, 1473, 1685, 1686, 2411
BmrI	ACTGGG	1 cut(s)	613
BmsI	GCATC	4 cut(s)	204, 924, 979, 1468
BmuI	ACTGGG	1 cut(s)	613
BoxI	GACNNNNGTC	1 cut(s)	2043
BpiI	GAAGAC	2 cut(s)	1881, 2043
BpmI	CTGGAG	1 cut(s)	2699
Bpu10I	CCTNAGC	1 cut(s)	2471
Bpu1102I	GCTNAGC	1 cut(s)	353
Bpu14I	TTCGAA	1 cut(s)	714
BpuEI	CTTGAG	3 cut(s)	647, 1523, 1796
BpuMI	CCSGG	6 cut(s)	484, 876, 1473, 1685, 1686, 2411
BsaAI	YACGTR	1 cut(s)	435
BsaHI	GRCGYC	8 cut(s)	63, 417, 609, 618, 657, 696, 720, 1073
BsaI	GGTCTC	2 cut(s)	1190, 1511
BsaWI	WCCGGW	4 cut(s)	219, 385, 856, 1145
BsaXI	ACNNNNNCTCC	4 cut(s)	1079, 1109, 1817, 1847
Bse118I	RCCGGY	3 cut(s)	357, 461, 614
Bse1I	ACTGG	9 cut(s)	28, 449, 608, 762, 1259, 1281, 1305, 2057, 2656
Bse3DI	GCAATG	1 cut(s)	2024
BseAI	TCCGGA	2 cut(s)	219, 1145
BseBI	CCWGG	2 cut(s)	735, 1201
BseGI	GGATG	6 cut(s)	122, 900, 1459, 1500, 1574, 2397
BseMI	GCAATG	1 cut(s)	2024
BseMII	CTCAG	7 cut(s)	24, 367, 758, 1364, 1634, 2462, 2579
BseNI	ACTGG	9 cut(s)	28, 449, 608, 762, 1259, 1281, 1305, 2057, 2656
BseRI	GAGGAG	3 cut(s)	64, 1100, 1449
BseSI	GKGCMC	2 cut(s)	2190, 2643
BseXI	GCAGC	1 cut(s)	2680
BseYI	CCCAGC	3 cut(s)	285, 302, 2550
BsgI	GTGCAG	2 cut(s)	1645, 2687
Bsh1236I	CGCG	8 cut(s)	519, 525, 551, 639, 654, 782, 1954, 1956
Bsh1285I	CGRYCG	2 cut(s)	147, 594
BshNI	GGYRCC	4 cut(s)	608, 695, 719, 1805
BsiEI	CGRYCG	2 cut(s)	147, 594
BsiHKAI	GWGCWC	3 cut(s)	531, 1293, 2190
BsiHKCI	CYCGRG	1 cut(s)	1684
BslFI	GGGAC	4 cut(s)	374, 407, 1346, 2374
BsmAI	GTCTC	7 cut(s)	625, 1083, 1190, 1501, 1511, 1555, 2256
BsmBI	CGTCTC	4 cut(s)	625, 1083, 1501, 2256
BsmFI	GGGAC	4 cut(s)	374, 407, 1346, 2374
Bso31I	GGTCTC	2 cut(s)	1190, 1511
BsoBI	CYCGRG	1 cut(s)	1684
Bsp119I	TTCGAA	1 cut(s)	714
Bsp120I	GGGCCC	1 cut(s)	2639
Bsp1286I	GDGCHC	5 cut(s)	531, 1293, 2190, 2214, 2643
Bsp13I	TCCGGA	2 cut(s)	219, 1145
Bsp1720I	GCTNAGC	1 cut(s)	353
Bsp19I	CCATGG	2 cut(s)	492, 1852
Bsp68I	TCGCGA	1 cut(s)	782
BspCNI	CTCAG	7 cut(s)	23, 366, 759, 1363, 1633, 2463, 2580
BspEI	TCCGGA	2 cut(s)	219, 1145
BspFNI	CGCG	8 cut(s)	519, 525, 551, 639, 654, 782, 1954, 1956
BspHI	TCATGA	1 cut(s)	1563
BspMI	ACCTGC	1 cut(s)	738
BspPI	GGATC	4 cut(s)	683, 2375, 2617, 2647
BspT104I	TTCGAA	1 cut(s)	714
BspT107I	GGYRCC	4 cut(s)	608, 695, 719, 1805
BspTNI	GGTCTC	2 cut(s)	1190, 1511
BsrBI	CCGCTC	2 cut(s)	72, 352
BsrDI	GCAATG	1 cut(s)	2024
BsrFI	RCCGGY	3 cut(s)	357, 461, 614
BsrI	ACTGG	9 cut(s)	28, 449, 608, 762, 1259, 1281, 1305, 2057, 2656
BssAI	RCCGGY	3 cut(s)	357, 461, 614
BssNI	GRCGYC	8 cut(s)	63, 417, 609, 618, 657, 696, 720, 1073
BssSI	CACGAG	3 cut(s)	1082, 1105, 1167
BssT1I	CCWWGG	4 cut(s)	492, 1578, 1852, 2041
Bst2BI	CACGAG	3 cut(s)	1082, 1105, 1167
Bst2UI	CCWGG	2 cut(s)	735, 1201
Bst6I	CTCTTC	4 cut(s)	1538, 1558, 1728, 2451
BstACI	GRCGYC	8 cut(s)	63, 417, 609, 618, 657, 696, 720, 1073
BstAPI	GCANNNNNTGC	1 cut(s)	2103
BstBAI	YACGTR	1 cut(s)	435
BstBI	TTCGAA	1 cut(s)	714
BstDEI	CTNAG	7 cut(s)	10, 353, 767, 1350, 1620, 2471, 2588
BstDSI	CCRYGG	6 cut(s)	370, 412, 492, 1642, 1852, 2314
BstEII	GGTNACC	1 cut(s)	457
BstF5I	GGATG	6 cut(s)	122, 900, 1459, 1500, 1574, 2397
BstFNI	CGCG	8 cut(s)	519, 525, 551, 639, 654, 782, 1954, 1956
BstH2I	RGCGCY	3 cut(s)	612, 699, 723
BstMAI	GTCTC	7 cut(s)	625, 1083, 1190, 1501, 1511, 1555, 2256
BstMCI	CGRYCG	2 cut(s)	147, 594
BstNI	CCWGG	2 cut(s)	735, 1201
BstNSI	RCATGY	4 cut(s)	820, 986, 2435, 2600
BstPAI	GACNNNNGTC	1 cut(s)	2043
BstPI	GGTNACC	1 cut(s)	457
BstSCI	CCNGG	8 cut(s)	482, 733, 874, 1199, 1471, 1683, 1684, 2409
BstSFI	CTRYAG	1 cut(s)	679
BstSLI	GKGCMC	2 cut(s)	2190, 2643
BstUI	CGCG	8 cut(s)	519, 525, 551, 639, 654, 782, 1954, 1956
BstV1I	GCAGC	1 cut(s)	2680
BstV2I	GAAGAC	2 cut(s)	1881, 2043
BstX2I	RGATCY	1 cut(s)	675
BstYI	RGATCY	1 cut(s)	675
BtgI	CCRYGG	6 cut(s)	370, 412, 492, 1642, 1852, 2314
BtgZI	GCGATG	1 cut(s)	797
BtrI	CACGTC	6 cut(s)	276, 1207, 1282, 1651, 2005, 2260
BtsCI	GGATG	6 cut(s)	122, 900, 1459, 1500, 1574, 2397
BtsIMutI	CAGTG	3 cut(s)	1274, 2064, 2566
BtuMI	TCGCGA	1 cut(s)	782
BveI	ACCTGC	1 cut(s)	738
CciI	TCATGA	1 cut(s)	1563
Cfr10I	RCCGGY	3 cut(s)	357, 461, 614
Cfr9I	CCCGGG	1 cut(s)	1684
CseI	GACGC	5 cut(s)	52, 406, 607, 1081, 1518
DdeI	CTNAG	7 cut(s)	10, 353, 767, 1350, 1620, 2471, 2588
DinI	GGCGCC	3 cut(s)	610, 697, 721
DrdI	GACNNNNNNGTC	3 cut(s)	449, 934, 968
DriI	GACNNNNNGTC	1 cut(s)	163
DseDI	GACNNNNNNGTC	3 cut(s)	449, 934, 968
EaeI	YGGCCR	1 cut(s)	999
Eam1104I	CTCTTC	4 cut(s)	1538, 1558, 1728, 2451
Eam1105I	GACNNNNNGTC	1 cut(s)	163
EarI	CTCTTC	4 cut(s)	1538, 1558, 1728, 2451
EciI	GGCGGA	1 cut(s)	302
Ecl136II	GAGCTC	1 cut(s)	529
Eco130I	CCWWGG	4 cut(s)	492, 1578, 1852, 2041
Eco24I	GRGCYC	3 cut(s)	531, 2214, 2643
Eco31I	GGTCTC	2 cut(s)	1190, 1511
Eco32I	GATATC	1 cut(s)	802
Eco53kI	GAGCTC	1 cut(s)	529
Eco57I	CTGAAG	2 cut(s)	1029, 2016
Eco72I	CACGTG	1 cut(s)	435
Eco88I	CYCGRG	1 cut(s)	1684
Eco91I	GGTNACC	1 cut(s)	457
EcoICRI	GAGCTC	1 cut(s)	529
EcoO109I	RGGNCCY	3 cut(s)	727, 970, 2640
EcoO65I	GGTNACC	1 cut(s)	457
EcoRI	GAATTC	1 cut(s)	2704
EcoRII	CCWGG	2 cut(s)	733, 1199
EcoRV	GATATC	1 cut(s)	802
EcoT14I	CCWWGG	4 cut(s)	492, 1578, 1852, 2041
EcoT22I	ATGCAT	1 cut(s)	2433
EcoT38I	GRGCYC	3 cut(s)	531, 2214, 2643
EgeI	GGCGCC	3 cut(s)	610, 697, 721
EheI	GGCGCC	3 cut(s)	610, 697, 721
ErhI	CCWWGG	4 cut(s)	492, 1578, 1852, 2041
Esp3I	CGTCTC	4 cut(s)	625, 1083, 1501, 2256
FalI	AAGNNNNNCTT	2 cut(s)	2159, 2191
FaqI	GGGAC	4 cut(s)	374, 407, 1346, 2374
FauI	CCCGC	8 cut(s)	55, 487, 530, 544, 665, 1481, 1959, 2630
FbaI	TGATCA	2 cut(s)	867, 1707
FblI	GTMKAC	3 cut(s)	1584, 1625, 1653
FokI	GGATG	6 cut(s)	109, 907, 1446, 1507, 1561, 2384
FriOI	GRGCYC	3 cut(s)	531, 2214, 2643
FspBI	CTAG	5 cut(s)	1184, 1665, 1830, 2048, 2255
GsaI	CCCAGC	3 cut(s)	289, 306, 2554
GsuI	CTGGAG	1 cut(s)	2699
HaeII	RGCGCY	3 cut(s)	612, 699, 723
HgaI	GACGC	5 cut(s)	52, 406, 607, 1081, 1518
Hin1I	GRCGYC	8 cut(s)	63, 417, 609, 618, 657, 696, 720, 1073
HindIII	AAGCTT	2 cut(s)	1973, 2099
HpyAV	CCTTC	9 cut(s)	343, 421, 710, 925, 983, 1570, 2040, 2257, 2540
HpyF3I	CTNAG	7 cut(s)	10, 353, 767, 1350, 1620, 2471, 2588
Hsp92I	GRCGYC	8 cut(s)	63, 417, 609, 618, 657, 696, 720, 1073
KasI	GGCGCC	3 cut(s)	608, 695, 719
Kpn2I	TCCGGA	2 cut(s)	219, 1145
KpnI	GGTACC	1 cut(s)	1809
KroI	GCCGGC	2 cut(s)	357, 614
KroNI	GCCGGC	2 cut(s)	359, 616
Ksp22I	TGATCA	2 cut(s)	867, 1707
LmnI	GCTCC	8 cut(s)	77, 292, 343, 534, 568, 1838, 1915, 2593
Lsp1109I	GCAGC	1 cut(s)	2680
LweI	GCATC	4 cut(s)	204, 924, 979, 1468
MaeI	CTAG	5 cut(s)	1184, 1665, 1830, 2048, 2255
MbiI	CCGCTC	2 cut(s)	72, 352
MboII	GAAGA	8 cut(s)	1545, 1555, 1745, 1881, 2048, 2468, 2489, 2695
MfeI	CAATTG	2 cut(s)	2088, 2241
MflI	RGATCY	1 cut(s)	675
MhlI	GDGCHC	5 cut(s)	531, 1293, 2190, 2214, 2643
MlsI	TGGCCA	1 cut(s)	1001
MluCI	AATT	6 cut(s)	236, 1900, 1962, 2088, 2241, 2704
MluNI	TGGCCA	1 cut(s)	1001
Mly113I	GGCGCC	3 cut(s)	609, 696, 720
MlyI	GAGTC	5 cut(s)	170, 944, 1174, 1820, 2225
MmeI	TCCRAC	5 cut(s)	258, 918, 1487, 1551, 1779
Mox20I	TGGCCA	1 cut(s)	1001
Mph1103I	ATGCAT	1 cut(s)	2433
MreI	CGCCGGCG	1 cut(s)	614
MroI	TCCGGA	2 cut(s)	219, 1145
MroNI	GCCGGC	2 cut(s)	357, 614
MscI	TGGCCA	1 cut(s)	1001
MseI	TTAA	2 cut(s)	1602, 2178
MslI	CAYNNNNRTG	4 cut(s)	920, 987, 1382, 2426
Msp20I	TGGCCA	1 cut(s)	1001
MspA1I	CMGCKG	1 cut(s)	285
MspR9I	CCNGG	8 cut(s)	484, 735, 876, 1201, 1473, 1685, 1686, 2411
MunI	CAATTG	2 cut(s)	2088, 2241
MvaI	CCWGG	2 cut(s)	735, 1201
MvnI	CGCG	8 cut(s)	519, 525, 551, 639, 654, 782, 1954, 1956
NaeI	GCCGGC	2 cut(s)	359, 616
NarI	GGCGCC	3 cut(s)	609, 696, 720
NciI	CCSGG	6 cut(s)	484, 876, 1473, 1685, 1686, 2411
NcoI	CCATGG	2 cut(s)	492, 1852
NgoMIV	GCCGGC	2 cut(s)	357, 614
NmeAIII	GCCGAG	3 cut(s)	116, 748, 1018
NruI	TCGCGA	1 cut(s)	782
NsiI	ATGCAT	1 cut(s)	2433
NspI	RCATGY	4 cut(s)	820, 986, 2435, 2600
NspV	TTCGAA	1 cut(s)	714
PagI	TCATGA	1 cut(s)	1563
PdiI	GCCGGC	2 cut(s)	359, 616
PfeI	GAWTC	5 cut(s)	597, 1523, 1668, 1880, 2568
PflFI	GACNNNGTC	1 cut(s)	1075
Ple19I	CGATCG	2 cut(s)	147, 594
PleI	GAGTC	5 cut(s)	169, 943, 1174, 1820, 2225
PluTI	GGCGCC	3 cut(s)	612, 699, 723
PmaCI	CACGTG	1 cut(s)	435
PmlI	CACGTG	1 cut(s)	435
PpsI	GAGTC	5 cut(s)	169, 943, 1174, 1820, 2225
Ppu21I	YACGTR	1 cut(s)	435
PpuMI	RGGWCCY	2 cut(s)	727, 970
PshAI	GACNNNNGTC	1 cut(s)	2043
Psp124BI	GAGCTC	1 cut(s)	531
Psp5II	RGGWCCY	2 cut(s)	727, 970
Psp6I	CCWGG	2 cut(s)	733, 1199
PspCI	CACGTG	1 cut(s)	435
PspEI	GGTNACC	1 cut(s)	457
PspFI	CCCAGC	3 cut(s)	285, 302, 2550
PspGI	CCWGG	2 cut(s)	733, 1199
PspOMI	GGGCCC	1 cut(s)	2639
PspPPI	RGGWCCY	2 cut(s)	727, 970
PsuI	RGATCY	1 cut(s)	675
PsyI	GACNNNGTC	1 cut(s)	1075
PvuI	CGATCG	2 cut(s)	147, 594
PvuII	CAGCTG	1 cut(s)	285
RruI	TCGCGA	1 cut(s)	782
RseI	CAYNNNNRTG	4 cut(s)	920, 987, 1382, 2426
SacI	GAGCTC	1 cut(s)	531
SaqAI	TTAA	2 cut(s)	1602, 2178
ScaI	AGTACT	2 cut(s)	91, 2225
SchI	GAGTC	5 cut(s)	170, 944, 1174, 1820, 2225
ScrFI	CCNGG	8 cut(s)	484, 735, 876, 1201, 1473, 1685, 1686, 2411
SduI	GDGCHC	5 cut(s)	531, 1293, 2190, 2214, 2643
SfaNI	GCATC	4 cut(s)	204, 924, 979, 1468
SfcI	CTRYAG	1 cut(s)	679
SfoI	GGCGCC	3 cut(s)	610, 697, 721
SfuI	TTCGAA	1 cut(s)	714
SgrAI	CRCCGGYG	1 cut(s)	614
SmaI	CCCGGG	1 cut(s)	1686
SmiMI	CAYNNNNRTG	4 cut(s)	920, 987, 1382, 2426
SmlI	CTYRAG	3 cut(s)	662, 1538, 1775
SmoI	CTYRAG	3 cut(s)	662, 1538, 1775
Sse9I	AATT	6 cut(s)	236, 1900, 1962, 2088, 2241, 2704
SspDI	GGCGCC	3 cut(s)	608, 695, 719
SspMI	CTAG	5 cut(s)	1184, 1665, 1830, 2048, 2255
SstI	GAGCTC	1 cut(s)	531
StyD4I	CCNGG	8 cut(s)	482, 733, 874, 1199, 1471, 1683, 1684, 2409
StyI	CCWWGG	4 cut(s)	492, 1578, 1852, 2041
TaqI	TCGA	7 cut(s)	42, 248, 453, 714, 1097, 1991, 2132
TaqII	GACCGA	2 cut(s)	1051, 1535
TasI	AATT	6 cut(s)	236, 1900, 1962, 2088, 2241, 2704
TatI	WGTACW	6 cut(s)	89, 204, 1032, 2172, 2223, 2286
TfiI	GAWTC	5 cut(s)	597, 1523, 1668, 1880, 2568
Tru1I	TTAA	2 cut(s)	1602, 2178
Tru9I	TTAA	2 cut(s)	1602, 2178
TscAI	CASTG	3 cut(s)	1281, 2064, 2566
TseI	GCWGC	1 cut(s)	2668
TspDTI	ATGAA	9 cut(s)	367, 1403, 1552, 1563, 1580, 2154, 2520, 2560, 2702
TspGWI	ACGGA	2 cut(s)	619, 2591
TspMI	CCCGGG	1 cut(s)	1684
TspRI	CASTG	3 cut(s)	1281, 2064, 2566
Tth111I	GACNNNGTC	1 cut(s)	1075
VneI	GTGCAC	1 cut(s)	2186
XapI	RAATTY	3 cut(s)	1900, 1962, 2704
XbaI	TCTAGA	2 cut(s)	1183, 2254
XceI	RCATGY	4 cut(s)	820, 986, 2435, 2600
XmaI	CCCGGG	1 cut(s)	1684
XmiI	GTMKAC	3 cut(s)	1584, 1625, 1653
XspI	CTAG	5 cut(s)	1184, 1665, 1830, 2048, 2255
ZraI	GACGTC	1 cut(s)	658
ZrmI	AGTACT	2 cut(s)	91, 2225
Zsp2I	ATGCAT	1 cut(s)	2433

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.